Carg23326 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23326
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like
Location	Carg_Chr06: 10467702 .. 10470885 (+)
RNA-Seq Expression	Carg23326
Synteny	Carg23326

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATGGTTTAAAATAATTTATGAAATTAAAAGGCTATGGAAATGACCAATATACCCTTCAGAAATGAAGAAATTAACCTATGGTACCCTTTTGAAAATGGACAATAAATAAATGAAGGCAATGTTGGTGTGTTTTCTTACTAATTGTCCGGTAGGCATTTGGGAGAGTGGGGGTTCATTCATCTGAGTCAAGAGAGCACGAACGGCTAGAGGAACAGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGTTCTGCCAAACCTCTCCTTCAAGTGCTCCCGCTAGGTATTCATTTTCTGCTTTCTCCTTCTCTTTGCGATCCCTTCTAAAAACAACAAATCCTGCTCCCTGAGCTTATTCTCACAAATTGTTGATTAATGGAGTTTCGGCTCTGACAGGACGTTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCACTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTACTTCACCCCCAATCATTTCACATTTCGTTTTATTCTCTTCTCTCTATATTTCGAGATTTATTCGGGCTTTGCTCGTCTTTGCTCCACATTCTTTTCATGTTGTTAATGATATGACGAAAAGGATTTTGCTGCTATACTGAAGCACGATTTCCTTTTGGGTTTATTTCGTCAAGCTTTGCAATTTTCTTTCTTTTCTTTTGTGAGCTGTGAAATTTACTGGTCCTGTGGTGGTTACAATGAGGGTGACGTTTACGTTCAGATTGTTTATGATTTTGTATGAATCATATTGCGTCATGTTAATGCTGTAAGTTTTTCATTTATAATCTCAGGTTTTTTAATGTTCGGTTTCCTCAATATGTATGTTAATGCCCTTCGAGTATTACACTTTTATTACCTGCTTTCATTATTCTAGATGATTGATTTGTTCACTTAACGGTCTTTAAGATTTAGAACCATTAATCTTCATTGGGATGCTTTTATCTTTCCTTTTTTTTTAATCAAATTTTTATTATTTTTTGAGTTTATGGATTTTGTATCTTTGAGCATTAAGAAACAAGCTTGTTAAAGCACTCTCTCTGGACATTCATTTCGTTATATGGATGCACCTAATTCGGGCCTTTTTAGTGGACTACTTGGGAGGAGCACAATAGTCGGATCTTCAAAGAAAAGGGAAGTTCTTTTGATAGTTTTTCTGAAAAATTATCTTCTTGCAATGACTGGGTGTCAATGCACATCTTATTTTAGCTTTTATAGCCTCTGTACAAAAGGTACGGGCTACATCAGGCGTCTACTTGGAAGGTTAACCCCTATACAAAAAGAAATTAAGACATTCATCTACCTTTAGTTATGATCCTCAAAAATTTTGGGTCGATTCTCTCAATGACTTGAATGTACCCAGCAACGCTACCGTAATCTTCCTGTCAAATTATTATGACCCATTAAATTGTTTTGACATGGTGGACTTGAAAGGATTCATGTCTTATGTTATTTGCAAGAAATAAATAACATGGACTCAAGAATGAGAGTTTAACTAGAAATTTGTTGAAGTTAGGTTTGTTTTTCTCACTAACACTAAATGAACTCACTGTTATTTATTACCTCATGAAGAACCACAATTATTTATCAAAATATCAAGACCTGTCCATTCCTTCTTTTTTCTTTTTTCTTTTTTCTTTGTTTTTTTATCAAGAAGATGTCAAGGATGATGAAGTTAAGTTTTCTTTGAGCTTGGATATCCTCAGATATTTTAAAACTTTTTGATAAAGAATGCCAAATCTGTAGAATCTGTAACTGATGATCCATGGGGCAGGAGGAATATATAGGGCGATGAAAGAAACTTCATGTGAACCTGGGGAAAATGTAGATATTGAGATTTTTCCTTTAATTTTATCAGAAATGTTAATGATTCCTTTAAGTAGCTCCCAAATTAAAATTTTGAACTTCTATGGATTTCTGTTTCTAGCCATTCAAACGTATTTGCATATGTTGGGTTTAAGGATTCCAGAATCCTCTGTGACGTTATTCAAAAGACATTTGCAGACAAATGATCTGTGTCATAAAGCCACAACCACTTGTCTTCCACGGGCCTGGCCATTAATTTAACAAGGGTATCTATAAGAGAAATCCGTTCTTGGGTCTCCAAATCATTAAAGTTTCTTCCGAAGTGTAGGTCCAAGAAATTTTGGTTGAGTTCCATAATTCACTTGTAGGAAAGCGTTTGGAACAACGTTAATTCAGGGAGGAATGGCAGCGAGAGCTACTTTTTTTTTTTTTTTTTTCTCAGGACCTAGTGTTTGCTCAATACCTTACATAATAGTTTCTCTTGAAACCAATACCTCTTTCTGTTCGAGAGTGACTTTCTAAGGGGCCTTTGGTGGTTTTGGTGGCAGTATGTCTGGAACACCAATCACTTTTGGAACTCCATATTGTTTAAGCTAGTTATCAAATAAAGTTATTAATGGACTTCAATGCCTATTGAACTTCAAGAACATAAACGAGGCTGTAGAAGAGTGAAAAGTGGAAAAAAGGAGGGCTTTTTACTGAAAATTAACATAGAGGAAGCTTGTGATGATGGAGAATGCAAGATTTTGGTTCAAGATGGAGGCTATGGATTCACACTTCTGATCAACAATTGTCGGGATTATCATCTGAAAATTGGAAGTGGAGGATGTGCTTTGGTTTGGCCTGATCATAGGACAATTGGTGAACGATAGTATATGTTTCTTATGAATGCTAATATCTTGCAAGTGTTTGACGTTAATAGCCATAACATTAGATAAATTTTTTTTAGAAGGATCAATCATTTCCTGAGATTTGGAGGTTATGTGATTGCAATATGCTTCTTATATGTTCGTCTTTGGTTAATGCAGCTGATTACTCTTTCTTTTTCTTTTTGGTTCAATAGATATGGGTGTTGAGAGGGTTGCTCGTTTAGAGGGTTTGAGCGAGGCACAGATCTCCAAGGCACTCGAAGACCTAGTAAAAGTTGGGGCATCCTGAAGGAGTAGTAATCTGCTGTGCTATTGTACTTGCAACAGACGTTAATAAATGCACGAGAGAAACTTCTGTGGAGATGCTTTTCTGTTTACATTCTATTCGCTCTTTTTTTTTTTTTTTTTTTCTTTGAGATTATTGCTCAAATACTCAGCTTGAGC

mRNA sequence

TTTTATGGTTTAAAATAATTTATGAAATTAAAAGGCTATGGAAATGACCAATATACCCTTCAGAAATGAAGAAATTAACCTATGGTACCCTTTTGAAAATGGACAATAAATAAATGAAGGCAATGTTGGTGTGTTTTCTTACTAATTGTCCGGTAGGCATTTGGGAGAGTGGGGGTTCATTCATCTGAGTCAAGAGAGCACGAACGGCTAGAGGAACAGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGTTCTGCCAAACCTCTCCTTCAAGTGCTCCCGCTAGTTTCGGCTCTGACAGGACGTTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCACTGGAGTCGAGCCGCAATTATGGGCTAGATATGATATGGGTGTTGAGAGGGTTGCTCGTTTAGAGGGTTTGAGCGAGGCACAGATCTCCAAGGCACTCGAAGACCTAGTAAAAGTTGGGGCATCCTGAAGGAGTAGTAATCTGCTGTGCTATTGTACTTGCAACAGACGTTAATAAATGCACGAGAGAAACTTCTGTGGAGATGCTTTTCTGTTTACATTCTATTCGCTCTTTTTTTTTTTTTTTTTTTCTTTGAGATTATTGCTCAAATACTCAGCTTGAGC

Coding sequence (CDS)

ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGTTCTGCCAAACCTCTCCTTCAAGTGCTCCCGCTAGTTTCGGCTCTGACAGGACGTTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCACTGGAGTCGAGCCGCAATTATGGGCTAGATATGATATGGGTGTTGAGAGGGTTGCTCGTTTAGAGGGTTTGAGCGAGGCACAGATCTCCAAGGCACTCGAAGACCTAGTAAAAGTTGGGGCATCCTGA

Protein sequence

MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS

Homology

[Close]

BLAST of Carg23326 vs. NCBI nr
Match: KAG7029169.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.1 bits (518), Expect = 5.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 100

[Close]

BLAST of Carg23326 vs. NCBI nr
Match: XP_022932709.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >XP_022972179.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita maxima] >XP_023539739.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita pepo subsp. pepo] >KAG6597722.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-44
Identity = 95/100 (95.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPA     RTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPA-----RTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >KAG6581644.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018138.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.3 bits (456), Expect = 8.5e-42
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQTSPSSAPA     R FVEKNYK+LKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPA-----RAFVEKNYKELKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. NCBI nr
Match: XP_038906356.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RGFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo] >KAA0037682.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RAFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           +EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  IEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: Q9FIJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.5e-36
Identity = 72/100 (72.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRG +SK++KELRIL CQ+SP+SAP      RTFVEKNYKDLK+LNPK PILIREC+G
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPT-----RTFVEKNYKDLKSLNPKLPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           V+PQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Sbjct: 61  VQPQMWARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]

BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: P0CB79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16
Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 11  LKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYD 70
           L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P+LWARY 
Sbjct: 16  LREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA 75

Query: 71  MGVERVARLEGLSEAQISKALEDLVKVGAS 101
            G E+   L   S  Q+++ALE+++K  AS
Sbjct: 76  FGQEKNVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: P0CB80 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus OX=9600 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16
Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 11  LKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYD 70
           L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P+LWARY 
Sbjct: 16  LREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA 75

Query: 71  MGVERVARLEGLSEAQISKALEDLVKVGAS 101
            G E+   L   S  Q+++ALE+++K  AS
Sbjct: 76  FGQEKNVPLNNFSADQVTRALENVLKPEAS 100

[Close]

BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: Q02370 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 8.3e-16
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 4  RGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEP 63
          RG+L   L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQP 70

Query: 64 QLWARYDMGVERVARLEGLSEAQISKALEDLV 96
          +LWARY  G E+   L   S  Q+++ALE+++
Sbjct: 71 KLWARYAFGQEKNVSLNNFSADQVTRALENVL 95

[Close]

BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: Q4R5E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 11 LKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYD 70
          L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P+LWARY 
Sbjct: 16 LREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA 75

Query: 71 MGVERVARLEGLSEAQISKALEDLV 96
           G E+   L   S  Q+++ALE+++
Sbjct: 76 FGQEKNVPLNNFSADQVTRALENVL 95

[Close]

BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A6J1IAR8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470791 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 95/100 (95.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPA     RTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPA-----RTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A6J1EXS5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111439176 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 95/100 (95.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPA     RTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPA-----RTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A6J1F628 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442457 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQTSPSSAPA     R FVEKNYK+LKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPA-----RAFVEKNYKELKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A5A7T2I6 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00030 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RAFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           +EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  IEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A1S3CN67 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RAFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           +EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  IEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]

BLAST of Carg23326 vs. TAIR 10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative )

HSP 1 Score: 151.4 bits (381), Expect = 3.9e-37
Identity = 72/100 (72.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRG +SK++KELRIL CQ+SP+SAP      RTFVEKNYKDLK+LNPK PILIREC+G
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPT-----RTFVEKNYKDLKSLNPKLPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           V+PQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Sbjct: 61  VQPQMWARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

The following BLAST results are available for this feature:

BLAST of Carg23326 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029169.1	5.5e-49	100.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosp...	[more]
XP_022932709.1	4.1e-44	95.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos...	[more]
XP_022935669.1	8.5e-42	90.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos...	[more]
XP_038906356.1	1.1e-41	91.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]	[more]
XP_008465169.1	1.1e-41	89.00	PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis...	[more]

BLAST of Carg23326 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIJ2	5.5e-36	72.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal...	[more]
P0CB79	3.7e-16	47.78	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=...	[more]
P0CB80	3.7e-16	47.78	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus O...	[more]
Q02370	8.3e-16	46.74	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99...	[more]
Q4R5E2	3.2e-15	47.06	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula...	[more]

BLAST of Carg23326 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAR8	2.0e-44	95.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m...	[more]
A0A6J1EXS5	2.0e-44	95.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m...	[more]
A0A6J1F628	4.1e-42	90.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m...	[more]
A0A5A7T2I6	5.4e-42	89.00	NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var...	[more]
A0A1S3CN67	5.4e-42	89.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=...	[more]

BLAST of Carg23326 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47890.1	3.9e-37	72.00	NADH-ubiquinone oxidoreductase B8 subunit, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 20..98 e-value: 1.5E-20 score: 84.2
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 34..83 e-value: 4.1E-13 score: 49.0
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PIRSF	PIRSF005822	NDUA2	coord: 1..100 e-value: 2.0E-36 score: 122.4
IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	PANTHER	PTHR12878	NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT	coord: 1..99
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 2..98 e-value: 2.2E-28 score: 100.4
None	No IPR available	PANTHER	PTHR12878:SF5	BNAANNG07980D PROTEIN	coord: 1..99
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 10..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23326-RA	Carg23326-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I