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Carg23292 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGCCGGATTCAATTCCTCGACATTCTTCCTGATCTGCGCCGCTGTGTTTGTGGTCTTCAGCTGCTCCTCAACCGCCGTTCACGGAGGCCTCGGGATCCAACACAGCCTCGGATGGATTCCTAACCAATCGACCTGCAAAGGCACAATAGCGGAGTGTTTCGGCGGAGAGGAGTTCGAATTCGATTCGGAAATCAGCCGACGTATCTTGGCCACCAGTCAGTACATCAGTTACGGCGCTCTGCGGAGGAACACCGTGCCGTGCTCGAGACGCGGTGCATCATACTACAACTGCCAGCCCGGAGCTCAGGCCAACCCTTACAGCCGTGGATGCAGCGCCATTACAAGGTGCAGGAGTTGAGTAATTTGTTTGTACTCTCTGTTTAATAATCTCTTTCTCTCCTTTCAATGTTCATTGATCTTTATTTTTTTCTTCTTTTTTTCCTCTTTTTTGAGATTGCTTTGGTTGTTATACAAATTGAAAAGGGGAGATTGATTATATAATGTCGTCGTTGTCGTTATTGTAAGTGATGAAAATTGTTGTGCTCAATTAATTATATATATATATCTTCTCAATAATGTGATATTCTATTCCTGGCTGGGATTTCTTTCCTCTTTCTTTCCTTTTGTCGATTGAAGGGAAAAGAGATTCTGCAAAGAGATTGAAGAACAAGAAAGGCTGTAATGGCTGGAATTAAGGAGAATTATGGCTCCCATCATGAGATAAGAGTAAGAACAAATTCATCAGTTGTTATAATTAGTATATTTCTCTTATAGAAACTGTGAAAGATTGTGTTTCTGATGCTGTTTTTGGGTTTAGATTAACTTTACAATGCCAATTTCTTTCCATTTTGGGTTTTGATCGGCTGACCAAACCATTTCCTTTCGTTTACTTGTTTTTTCTCTCTCTGTTCTCATCTGTTTATGGTAAAGAATCTTGAACTCTTTAGGAAAAATATTTAGAGAGGGAAGTTTTCCTTGAGAAATCATACCATACTACTGATTTGATTCTTGGTGCTCTTGAATTGGCTATCATGTTGAGGTTGGGTACTTTTCTTAGAACTTTCATTATGTTGACAAGAGAAGTAAATATCAAATATTTGTAACCATATGTATATGTGTGTGCATTGATTATGGTTTTACTTAGTTTTAGTATCATATTGAGGATAATTATGCATTCTAGAAGTAAAACTACTTCCATGGATTGCCCTAATGATCGAAAGGGCGAACCAGATGTTCTTGAGATGTATATGTCTGTGCATTGATTATGGTTTCAAGCTATGGTGTTGGTGGCTATCTATCTAGGATTTCCCGTTGTTATCTGAGGTTTGTTGAGATGTACATGATGTGGATGGGACTCATATTATATATTAGTATA ATGGCAATGGCCGGATTCAATTCCTCGACATTCTTCCTGATCTGCGCCGCTGTGTTTGTGGTCTTCAGCTGCTCCTCAACCGCCGTTCACGGAGGCCTCGGGATCCAACACAGCCTCGGATGGATTCCTAACCAATCGACCTGCAAAGGCACAATAGCGGAGTGTTTCGGCGGAGAGGAGTTCGAATTCGATTCGGAAATCAGCCGACGTATCTTGGCCACCAGTCAGTACATCAGTTACGGCGCTCTGCGGAGGAACACCGTGCCGTGCTCGAGACGCGGTGCATCATACTACAACTGCCAGCCCGGAGCTCAGGCCAACCCTTACAGCCGTGGATGCAGCGCCATTACAAGGGAAAAGAGATTCTGCAAAGAGATTGAAGAACAAGAAAGGCTGTAATGGCTGGAATTAAGGAGAATTATGGCTCCCATCATGAGATAAGAGTAAGAACAAATTCATCAGTTGTTATAATTAGTATATTTCTCTTATAGAAACTGTGAAAGATTGTGTTTCTGATGCTGTTTTTGGGTTTAGATTAACTTTACAATGCCAATTTCTTTCCATTTTGGGTTTTGATCGGCTGACCAAACCATTTCCTTTCGTTTACTTGTTTTTTCTCTCTCTGTTCTCATCTGTTTATGGTAAAGAATCTTGAACTCTTTAGGAAAAATATTTAGAGAGGGAAGTTTTCCTTGAGAAATCATACCATACTACTGATTTGATTCTTGGTGCTCTTGAATTGGCTATCATGTTGAGGTTGGGTACTTTTCTTAGAACTTTCATTATGTTGACAAGAGAAGTAAATATCAAATATTTGTAACCATATGTATATGTGTGTGCATTGATTATGGTTTTACTTAGTTTTAGTATCATATTGAGGATAATTATGCATTCTAGAAGTAAAACTACTTCCATGGATTGCCCTAATGATCGAAAGGGCGAACCAGATGTTCTTGAGATGTATATGTCTGTGCATTGATTATGGTTTCAAGCTATGGTGTTGGTGGCTATCTATCTAGGATTTCCCGTTGTTATCTGAGGTTTGTTGAGATGTACATGATGTGGATGGGACTCATATTATATATTAGTATA ATGGCAATGGCCGGATTCAATTCCTCGACATTCTTCCTGATCTGCGCCGCTGTGTTTGTGGTCTTCAGCTGCTCCTCAACCGCCGTTCACGGAGGCCTCGGGATCCAACACAGCCTCGGATGGATTCCTAACCAATCGACCTGCAAAGGCACAATAGCGGAGTGTTTCGGCGGAGAGGAGTTCGAATTCGATTCGGAAATCAGCCGACGTATCTTGGCCACCAGTCAGTACATCAGTTACGGCGCTCTGCGGAGGAACACCGTGCCGTGCTCGAGACGCGGTGCATCATACTACAACTGCCAGCCCGGAGCTCAGGCCAACCCTTACAGCCGTGGATGCAGCGCCATTACAAGGGAAAAGAGATTCTGCAAAGAGATTGAAGAACAAGAAAGGCTGTAA MAMAGFNSSTFFLICAAVFVVFSCSSTAVHGGLGIQHSLGWIPNQSTCKGTIAECFGGEEFEFDSEISRRILATSQYISYGALRRNTVPCSRRGASYYNCQPGAQANPYSRGCSAITREKRFCKEIEEQERL Homology
BLAST of Carg23292 vs. NCBI nr
Match: KAG7021083.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 271.2 bits (692), Expect = 4.8e-69 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Carg23292 vs. NCBI nr
Match: XP_022937540.1 (protein RALF-like 33 [Cucurbita moschata]) HSP 1 Score: 244.2 bits (622), Expect = 6.3e-61 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Carg23292 vs. NCBI nr
Match: XP_022966015.1 (protein RALF-like 33 [Cucurbita maxima] >XP_023537429.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242.3 bits (617), Expect = 2.4e-60 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Carg23292 vs. NCBI nr
Match: KAG6586247.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 241.1 bits (614), Expect = 5.3e-60 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Carg23292 vs. NCBI nr
Match: XP_038889183.1 (protein RALF-like 33 [Benincasa hispida]) HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57 Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.7e-29 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.3e-28 Identity = 64/96 (66.67%), Postives = 73/96 (76.04%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 5.6e-28 Identity = 70/117 (59.83%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.2e-27 Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 8.1e-27 Identity = 59/77 (76.62%), Postives = 65/77 (84.42%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy TrEMBL
Match: A0A6J1FH12 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111443916 PE=3 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy TrEMBL
Match: A0A6J1HQE4 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111465728 PE=3 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy TrEMBL
Match: A0A0A0LFW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031140 PE=3 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56 Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy TrEMBL
Match: A0A5A7TYI2 (Rapid ALkalinization Factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00530 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.3e-55 Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of Carg23292 vs. ExPASy TrEMBL
Match: A0A6J1DA82 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111018792 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54 Identity = 107/118 (90.68%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of Carg23292 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Carg23292 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 125.6 bits (314), Expect = 3.0e-29 Identity = 64/96 (66.67%), Postives = 73/96 (76.04%), Query Frame = 0
BLAST of Carg23292 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 125.2 bits (313), Expect = 4.0e-29 Identity = 70/117 (59.83%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Carg23292 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 121.3 bits (303), Expect = 5.7e-28 Identity = 59/77 (76.62%), Postives = 65/77 (84.42%), Query Frame = 0
BLAST of Carg23292 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 78.2 bits (191), Expect = 5.6e-15 Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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