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Carg23291 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCACCAGCTCAAGTAAGTTGGATGTTCTTCGCGTAATTTCGTATTACTTTTTTGTTTTTGCTGTTTTTCTATAATGAATTTCTATAAACGAACGGAATTTTCTTTATGCAAGTAATAATAGTTTGAATTAAGTTTTGTTCGTTAGCTCATGTTGCGAATTTGGTGATTTTCTTGTTGGATAAGGTCGAAAGATCAGTTTCCTACAATGAACATACGTCGAGGAGGCCGCCGCCGGAGTTGCCGTCTCTATTACTTCATGGAAGAATCATTTACATCGGAATGCCTGTAAGTGCTTGAATTAGTGTTTGTCCAGTGCTATACGATTTAACTCGTTACTCGATGAACTATTCAACGAATAGAAAGGGAGAATTTACGACTGTTTTTTTCAACAACGTGTTGTCGAGCAGTTTCATAAGAAGAAAAAATCAAAAGAAGAAGCATGTTCTTCGAACTTATAAAAAATAGAAAGGTGCATCTCATGATAATCACATATTTTCGACCTCTGGAGACGTACAGAATGATGAAAATTCTAGTTCAGGAATGAGTGAGTCATGCTGTTTTAGGAACCTTGTTTGTTGAACTGAAAGTATCAATTGGAGTACTTTGATATCGTGATCACCTTAGAATAGATTTTGTGAGTACATTCAAGTGCTGAATTTGAAGTTCGGCAGTAATTCTTGAAATTCTTGGCAAGTTCTCAATTTATTTTAACTGATTTTCATTTGTTTCCTCTCGACTTGCATAAGCTTTACTGAAATAGACATTCACTGTGTTAAGTGTTTTTAGGTTTTTTTAAAAATTAATTTCGAGGCATAATCGATTTTGAATGTTTAAGAATCGATTGTGCATTCATTTTGAGATAGTTTTTTGTTGGATGATGAAAGTCCCCATCGGCTAATTTAGGGAATGATCATGGGTTTATAAACAAAGAATACTCTCTCCATTGGTATGAGGCCTTTTGGGGAAGCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTAGACAATATCATACCGTTGTGGAGAGTCGTGTTCATCTAACATGGTATCAGAGCCATGCCCTAAACTTAGTCGTGCCAATAGATTGGTAAATCCTCAAATGTCGAACAAAGGACTCCAAAATGAAAAAGGAGTTAAGCCTCCTCGAAGGCGGTAAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTCGATTAAGGGGAGGTGTGGTTTGTTCGAGGGGAGGTGTCGGATGATGAAAGTCCCAATCGGGTGATTTAGGGAATGATCATGGGTTTATAAACAAAGAATACGCTCTCCATTGGTATGAGGCATTTTGGGGAAGCCCAAAGCAAAACTATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATTTTTGACTTCCATCTTATAGAAGAAGTTTTCTGCTTCACGCAAGCATGTCATATGGTTACTTACCTAAAACGTCTTCATTCAATTATTTCTGCTCTCAGTTTGTTCCAGCTGTCACAGAGCTAGTTATTGCTGAACTGATGTACCTGCAATGGATGGATCCAAGAGAACCAGTATATCTTTATATAAACTCCACAGGAACAACTCGAGATGCTGACGAAACTGTAAGCTTTTAATTTATTCAGCTACCTGAAACAAGTGAAATTAAGTTGTGAAGGGCATGCATTTCTTTCCTCATGCTTTATAATATCATCTGCCTACATTTTTAGGTTTTGTATTCAGACTATAAATCTGCCTCGTTTATCTACGTGTTGACATGAATATCAACTTGTTTGTCTTGATCTGGAGTTCCTTTGTTTGAGATGTTACAGGACTCATTTTCTAATTTGTTCATCATTAATAATTAAGAAAAACAATTAAAATGAGATTGTAATTTTTAGATTTTTTCTTCCAAAAGTATGTTTAATTGTAATTACTAAGAGCAGCTTCTTGATCCACAATCTGTGAAATTGGGCTGGGTTTGATGCTGCTCGTGACGTTCTTATTCGTGCAAAAGAGGTCAAGATCCTTCTATAGCCTGGTAATTTATTTTGAAGTAGAACTCAGTTTCTTTGACTCTGATTTTTGCTGGTGTTGAGGATTGTTCGGTGGGAGTCCCACATTGGCTAATTTAGGG ATGGCTGCACCAGCTCAAGTCGAAAGATCAGTTTCCTACAATGAACATACGTCGAGGAGGCCGCCGCCGGAGTTGCCGTCTCTATTACTTCATGGAAGAATCATTTACATCGGAATGCCTTTTGTTCCAGCTGTCACAGAGCTAGTTATTGCTGAACTGATGTACCTGCAATGGATGGATCCAAGAGAACCAGTATATCTTTATATAAACTCCACAGGAACAACTCGAGATGCTGACGAAACTCTTCTTGATCCACAATCTGTGAAATTGGGCTGGGTTTGATGCTGCTCGTGACGTTCTTATTCGTGCAAAAGAGGTCAAGATCCTTCTATAGCCTGGTAATTTATTTTGAAGTAGAACTCAGTTTCTTTGACTCTGATTTTTGCTGGTGTTGAGGATTGTTCGGTGGGAGTCCCACATTGGCTAATTTAGGG ATGGCTGCACCAGCTCAAGTCGAAAGATCAGTTTCCTACAATGAACATACGTCGAGGAGGCCGCCGCCGGAGTTGCCGTCTCTATTACTTCATGGAAGAATCATTTACATCGGAATGCCTTTTGTTCCAGCTGTCACAGAGCTAGTTATTGCTGAACTGATGTACCTGCAATGGATGGATCCAAGAGAACCAGTATATCTTTATATAAACTCCACAGGAACAACTCGAGATGCTGACGAAACTCTTCTTGATCCACAATCTGTGAAATTGGGCTGGGTTTGA MAAPAQVERSVSYNEHTSRRPPPELPSLLLHGRIIYIGMPFVPAVTELVIAELMYLQWMDPREPVYLYINSTGTTRDADETLLDPQSVKLGWV Homology
BLAST of Carg23291 vs. NCBI nr
Match: KAG7021082.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 192.6 bits (488), Expect = 1.5e-45 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg23291 vs. NCBI nr
Match: XP_022937541.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 181.8 bits (460), Expect = 2.7e-42 Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Carg23291 vs. NCBI nr
Match: XP_022966028.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 174.1 bits (440), Expect = 5.6e-40 Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Carg23291 vs. NCBI nr
Match: KAG6586246.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166.8 bits (421), Expect = 9.0e-38 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Carg23291 vs. NCBI nr
Match: XP_038890491.1 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Benincasa hispida] >XP_038890492.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Benincasa hispida]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 72/82 (87.80%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 9.1e-33 Identity = 63/82 (76.83%), Postives = 75/82 (91.46%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.9e-15 Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy Swiss-Prot
Match: Q9XJ35 (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR1 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 6.5e-15 Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-13 Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.0e-12 Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy TrEMBL
Match: A0A6J1FAM0 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443918 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42 Identity = 86/88 (97.73%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy TrEMBL
Match: A0A6J1HQN5 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465735 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.7e-40 Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy TrEMBL
Match: A0A1S3BXZ3 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103494643 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy TrEMBL
Match: A0A5A7U3K5 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00970 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Carg23291 vs. ExPASy TrEMBL
Match: A0A5D3CQV3 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00520 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.5e-33 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Carg23291 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein ) HSP 1 Score: 140.6 bits (353), Expect = 6.4e-34 Identity = 63/82 (76.83%), Postives = 75/82 (91.46%), Query Frame = 0
BLAST of Carg23291 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein ) HSP 1 Score: 140.6 bits (353), Expect = 6.4e-34 Identity = 63/82 (76.83%), Postives = 75/82 (91.46%), Query Frame = 0
BLAST of Carg23291 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein ) HSP 1 Score: 140.6 bits (353), Expect = 6.4e-34 Identity = 63/82 (76.83%), Postives = 75/82 (91.46%), Query Frame = 0
BLAST of Carg23291 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 ) HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16 Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of Carg23291 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 ) HSP 1 Score: 81.3 bits (199), Expect = 4.6e-16 Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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