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Carg23284 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGCCCTAAAACCATTGTCGTTCACTCCTAGCAGTCGCCGTCGCGGAGCGGAAGGGTTTCTCCACCAAGAGCTTCAATGGTCTGTTTCTTTCTCTACCTCAATTCATTTCTATTGCTCCAATGGTGTAGATCAATGTCTGAGACTTGTTTTCCGTTAATTGCAGGGGATCGATCTCGTAGCAGGAGGCAAGAGTAAGAAGACCAAGAGGACTGCGCCTAAGTCCGACGATATCTACCTCAAGCTCCTCGTGAAGGTTGGTTTTCTTATTTTATATTTTTGCTAATCATCGCTGGTTACGCTGTAGTGACGAGCATTTGATTTCACCGATTGAAATTCTTAGAGAATTGAAATGAGTTTTTATTTATTTATTTTTTTAAACTAATGAATGAGTATGTTGTGAATGTGAATGTGGAGTGGAATTTTAGACATTGTTATTTTCACGTGATTTTGCTCGTGTTTCAGTTTTTTAAGTCTGGATTTTTTTTAAACTTAAATGTGCTTGAAATCTGATTATTTGATAATAAAGTAGGTGAAGTTTATGTGCAGTGATGATATCTGTGTATCCCAGCTCATTATGAGACCTTTCGTAGGTCCGGGAATGAACCAGTTTCCACATTTATCTGAGCCTAGGCTCAGAGTTTTTAAACTTTCTGATTCAATTTGAACAACGAAGCAGAATAATTGGCCACTAATAAACCTGGATTTCGAATTTTTAGATACGAAATATTATATCTTCATCGATTGGCCTATATTTTTAACTTTCTTAAAACTATATTTTGATTGAAATGCTGATTGTATTATCAGCCGCAATGATGCAATGTGATAATCCCAGCTCTATGAGACTTTCTAAAGGTCAAGGACTAGACAAGATCCACATATTTACCTGAGCTCAAAATATTATTTTTAAATCTATGGGCCAATATTTTTAACTTTTCTTTAATTATATTTTGATTGAAAATGCTTATTGTATTATCAACCGCAATGATGCAATGTGATAATCCCAGCTCTATGAGACTTTCTAAAGGTCAAGGACTAGACAAGATCCACATATACACCTGAGCTCAAAATATAATTTTTAAATCGATGGGCTAATATTTTTAACTTTTCTTTTATTTTATTTTTATTGAAATGCTGATTTTATTATCAGCCGCAATGATGCAATATGATAATCCCAGCTCTATGAGACTTTCTACAGGTCAAGGATTAGACAAGATCCACATATTTACCTGAGCTTAAAATATTATTTTTAAATCGACGGGCCAATATTTTTATCTTTTCTTTAATTATGTTTTGATTGAAATGTTTATTGTGTTACCGCAATGATGCAATGTGATAATCCCAGCTCTATGAGACTTTCTACAGGTCAAGGACTAGACAAGATCCACATATTTACCTGAGCTCAAAATATTACTTTTAAATCGATGGCCCAATATTTTTAACTTTTCTTTAATTATATTTTGATTGAAATGTTTACTGTGTGTTATCAGCCGCAATGATGCAATGTGTTAATCCCAGCTCTATGAGACTTTCTAAAGGTCAAGGACTAGACAAGATCCACATATTTACCTGAGCTCAAAATATTTTACTCTTTCAGTTTTTTCATTTCGCATCAAACTCAGCAGTAAAATTAAGATGACAATTATGAGCTACCTTCATCATGTATTGATAACGAAGCCCGTTCGCATATCCTTCTGCCATTTCAGTCACTGTCTTCCTTGTCGAAGGATTGAGAGATAGGTTGTTCCCTATGATGTTTTACTTTTTAAACCATGCTAATACTGATCACATGATGATTGATCTTCAACTCTTGTCTCTGAGGGAACTAGCCTACACTCTTGAATTAATTTTTTCTGAAGGACCTTTATTTGTTTGAATATCTAATATTGTATCCATATGAATTTATAATCTTATTCTGTGATAATATTCTTTAACTTTAACCCTTGTATCTTAATGGAGCATGAAATCTGGTTGTTTGATGAGTAAGTAGTTGAAGTTTATGTGCAGTGATGATATCTGTGTATCCCAGCTCATTATGAGACCTTCCGTAGGTCCGGGAATGAATCTGTTTCCACATTTATCTGAGCTTAGGTTCATTGTTAAACTTTCTTATTCAATTTGAACAACGAAACGGTATAATTGTTCACTAAGAAACCTTGATTTCGAATTTTTTGTCTCCCCTTAAATTTATTTTGATTGAAATGCTGATATTGTTATATCAGCAGCAATGATGAATTATGTTAATCCCAGCTCTATGAGGCATTCTAAATGCCAATGACTGGACAAGATTCACATATTTACCTGAGCTCAAACTATTGTACCCTTGAAGTTTTTCATTTTGTATCAAATTCAGCATTCAAATTAAGATGAAAAGAAGGGCTACTTTCTTGCGTTTCAAGATTGTTTTCAATAATAATTCATTTTTATGGTCACTTTAGGTTTATTTTAAGGTGTTTAATGTTCATTATGCTTATTCGGTTCATTTAAGTGATGGGTTCTTTCAATTTTGTTCACTGAATTCAGCTGTACCGATTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTCAAGCGGTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCCGACTTATCAAGTTCATGAAGGGAAAGGTGTGTGCTTCTATGTATGCATTACCTATTCTTCACCATTTTATCCGCATTGTTCAGTGTCTAACTTCACGTGGTTATAACTTTGTACAGGAAAATAAAATCGCTGTCATTGTCGGAACCGTGACCGACGACATTCGTGTTTATGAAGTCCCAGCTTTGAAGGTTACAGCCTTGAGGTTTACCGAGACTGCAAGGGCAAGGATCGAGAAGGCTGGTGGCGAGTGCTTGACCTTCGACCAACTTGCCCTGCGAGCTCCTCTTGGCCAGAATACGGTACGAAAGCGACTGTGTCCTGGAATTTCATATAGACTTGTCGTCGAACACCCTATATTAACAATTGTGAGATTCAAACTTAATCTGCTGTAATTTTGCATCCAAAGGTTCTCCTTCGTGGACCGAAGAACTCCCGAGAAGCCGTGAAGCACTTTGGTCCTGCTCCCGGTGTACCTCACAGCCACACGAAACCGTACGTGAGGTCGAAGGGAAGGAAGTTTGAGAGAGCTAGAGGAAAGAGGAACAGCAGGGGTTACAGAGTTTAGTTTCAGTACCATGTTCAGCGCTATTTGTGAGACAGAAAATTCACGTTTTGGTAAACTTGAAGATACATTATCATGTGAGATTCACTCGTTTCTTTGTTCAAGTTTTCGCTATTATAACATCACAATCGTATTCAATGAGAAACATCTTGTATTTTCTTTTCTCCCACTTTTCCATCCTTATTTGCTTCATATTTCAAAACTGTCCATATTGTTCTATGAACAAATTAGCCTTTAGTAAGTTTTTGGTATATCTATATATTTTACATACTATTTTGTATTTAATTGTTTCAATGTCAATATCAGTCGAACACGAGAGGTCGACCACCATGAGTGCCTGCGAAAGTGAATGCTTTTGAGGACTTTGAGGTCGATCTCCATGGGGAATGAAGCATTCTTCATAAGGATGTGGAAACATCCCTCTAACTGGTACGTTTTAAAAACGGTAGACTTGAGATGTTACGATAGGGTCATTCACTCTTGGATATTTTATTATAGATATTTTACATGACTCAATTTATGCCAAGTTTTGTCAATTTTTAGGCCTCCTTTGAGGTCGATCTCC AAAGCCCTAAAACCATTGTCGTTCACTCCTAGCAGTCGCCGTCGCGGAGCGGAAGGGTTTCTCCACCAAGAGCTTCAATGGGGATCGATCTCGTAGCAGGAGGCAAGAGTAAGAAGACCAAGAGGACTGCGCCTAAGTCCGACGATATCTACCTCAAGCTCCTCGTGAAGCTGTACCGATTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTCAAGCGGTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCCGACTTATCAAGTTCATGAAGGGAAAGGAAAATAAAATCGCTGTCATTGTCGGAACCGTGACCGACGACATTCGTGTTTATGAAGTCCCAGCTTTGAAGGTTACAGCCTTGAGGTTTACCGAGACTGCAAGGGCAAGGATCGAGAAGGCTGGTGGCGAGTGCTTGACCTTCGACCAACTTGCCCTGCGAGCTCCTCTTGGCCAGAATACGGTTCTCCTTCGTGGACCGAAGAACTCCCGAGAAGCCGTGAAGCACTTTGGTCCTGCTCCCGGTGTACCTCACAGCCACACGAAACCGTACGTGAGGTCGAAGGGAAGGAAGTTTGAGAGAGCTAGAGGAAAGAGGAACAGCAGGGGTTACAGAGTTTAGTTTCAGTACCATGTTCAGCGCTATTTGTGAGACAGAAAATTCACGTTTTGGTAAACTTGAAGATACATTATCATGTGAGATTCACTCGTTTCTTTGTTCAAGTTTTCGCTATTATAACATCACAATCGTATTCAATGAGAAACATCTTGTATTTTCTTTTCTCCCACTTTTCCATCCTTATTTGCTTCATATTTCAAAACTGTCCATATTGTTCTATGAACAAATTAGCCTTTAGTAAGTTTTTGGTATATCTATATATTTTACATACTATTTTGTATTTAATTGTTTCAATGTCAATATCAGTCGAACACGAGAGGTCGACCACCATGAGTGCCTGCGAAAGTGAATGCTTTTGAGGACTTTGAGGTCGATCTCCATGGGGAATGAAGCATTCTTCATAAGGATGTGGAAACATCCCTCTAACTGGCCTCCTTTGAGGTCGATCTCC ATGGGGATCGATCTCGTAGCAGGAGGCAAGAGTAAGAAGACCAAGAGGACTGCGCCTAAGTCCGACGATATCTACCTCAAGCTCCTCGTGAAGCTGTACCGATTTCTTGTCCGAAGAACTGGAAGCAATTTCAATGCAGTGATCCTCAAGCGGTTGTTCATGAGCAAGGTGAACAAGCCACCAATTTCACTATCCCGACTTATCAAGTTCATGAAGGGAAAGGAAAATAAAATCGCTGTCATTGTCGGAACCGTGACCGACGACATTCGTGTTTATGAAGTCCCAGCTTTGAAGGTTACAGCCTTGAGGTTTACCGAGACTGCAAGGGCAAGGATCGAGAAGGCTGGTGGCGAGTGCTTGACCTTCGACCAACTTGCCCTGCGAGCTCCTCTTGGCCAGAATACGGTTCTCCTTCGTGGACCGAAGAACTCCCGAGAAGCCGTGAAGCACTTTGGTCCTGCTCCCGGTGTACCTCACAGCCACACGAAACCGTACGTGAGGTCGAAGGGAAGGAAGTTTGAGAGAGCTAGAGGAAAGAGGAACAGCAGGGGTTACAGAGTTTAG MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPISLSRLIKFMKGKENKIAVIVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGYRV Homology
BLAST of Carg23284 vs. NCBI nr
Match: KAG7021075.1 (60S ribosomal protein L18-3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 363.6 bits (932), Expect = 1.0e-96 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Carg23284 vs. NCBI nr
Match: XP_022937764.1 (60S ribosomal protein L18-3-like [Cucurbita moschata]) HSP 1 Score: 361.7 bits (927), Expect = 3.8e-96 Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0
BLAST of Carg23284 vs. NCBI nr
Match: XP_022965965.1 (60S ribosomal protein L18-3 [Cucurbita maxima] >KAG6599207.1 60S ribosomal protein L18-3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 361.7 bits (927), Expect = 3.8e-96 Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Carg23284 vs. NCBI nr
Match: KAG6586240.1 (60S ribosomal protein L18-3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 361.3 bits (926), Expect = 5.0e-96 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Carg23284 vs. NCBI nr
Match: XP_022999399.1 (60S ribosomal protein L18-2 [Cucurbita maxima]) HSP 1 Score: 360.5 bits (924), Expect = 8.6e-96 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.1e-89 Identity = 163/187 (87.17%), Postives = 181/187 (96.79%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2) HSP 1 Score: 328.6 bits (841), Expect = 4.7e-89 Identity = 162/187 (86.63%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 6.0e-84 Identity = 157/184 (85.33%), Postives = 174/184 (94.57%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3) HSP 1 Score: 293.5 bits (750), Expect = 1.7e-78 Identity = 149/188 (79.26%), Postives = 167/188 (88.83%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy Swiss-Prot
Match: Q4PM04 (60S ribosomal protein L18 OS=Ixodes scapularis OX=6945 GN=RpL18 PE=2 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.3e-65 Identity = 127/188 (67.55%), Postives = 158/188 (84.04%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy TrEMBL
Match: A0A6J1HQ85 (60S ribosomal protein L18-3 OS=Cucurbita maxima OX=3661 GN=LOC111465687 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.9e-96 Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy TrEMBL
Match: A0A6J1FC57 (60S ribosomal protein L18-3-like OS=Cucurbita moschata OX=3662 GN=LOC111444066 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.9e-96 Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy TrEMBL
Match: A0A6J1KGZ8 (60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111493781 PE=3 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 4.1e-96 Identity = 185/187 (98.93%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy TrEMBL
Match: A0A6J1DTG6 (60S ribosomal protein L18-3 OS=Momordica charantia OX=3673 GN=LOC111023330 PE=3 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 7.1e-96 Identity = 184/187 (98.40%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of Carg23284 vs. ExPASy TrEMBL
Match: A0A6J1G525 (60S ribosomal protein L18-3 OS=Cucurbita moschata OX=3662 GN=LOC111450785 PE=3 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 9.2e-96 Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 0
BLAST of Carg23284 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 329.7 bits (844), Expect = 1.5e-90 Identity = 163/187 (87.17%), Postives = 181/187 (96.79%), Query Frame = 0
BLAST of Carg23284 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 ) HSP 1 Score: 328.6 bits (841), Expect = 3.4e-90 Identity = 162/187 (86.63%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Carg23284 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 208.0 bits (528), Expect = 6.6e-54 Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 0
BLAST of Carg23284 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 208.0 bits (528), Expect = 6.6e-54 Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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