Homology
BLAST of Carg23278 vs. NCBI nr
Match:
KAG7021069.1 (Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 744.2 bits (1920), Expect = 5.9e-211
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 401
BLAST of Carg23278 vs. NCBI nr
Match:
KAG6586235.1 (Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 738.8 bits (1906), Expect = 2.5e-209
Identity = 400/401 (99.75%), Postives = 400/401 (99.75%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRD GRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 401
BLAST of Carg23278 vs. NCBI nr
Match:
XP_022937574.1 (pre-mRNA-splicing factor 38-like [Cucurbita moschata] >XP_022937575.1 pre-mRNA-splicing factor 38-like [Cucurbita moschata])
HSP 1 Score: 730.7 bits (1885), Expect = 6.8e-207
Identity = 398/401 (99.25%), Postives = 398/401 (99.25%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRD GRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
DEPKRKKEKKEKKEGG AGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGG-AGEEDPEIAEWNRIRASLGLAPLK 400
BLAST of Carg23278 vs. NCBI nr
Match:
XP_022965789.1 (pre-mRNA-splicing factor 38-like [Cucurbita maxima] >XP_022965790.1 pre-mRNA-splicing factor 38-like [Cucurbita maxima])
HSP 1 Score: 712.6 bits (1838), Expect = 1.9e-201
Identity = 391/401 (97.51%), Postives = 392/401 (97.76%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRD GRGRERDRDRDRDRDRDRDRD R RDRDRDRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRD----RGRDRDRDRDRYRLRDDKEYSR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRD EREGRERERRDRDHHGRRRSHSR+RSRSKDREDGEYRKRHAR SASPRRRDGAEDR
Sbjct: 301 DRDGEREGRERERRDRDHHGRRRSHSRNRSRSKDREDGEYRKRHARCSASPRRRDGAEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
DEPKRKKEKKEKKEGG AGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGG-AGEEDPEIAEWNRIRASLGLAPLK 396
BLAST of Carg23278 vs. NCBI nr
Match:
XP_023537588.1 (pre-mRNA-splicing factor 38-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 711.1 bits (1834), Expect = 5.5e-201
Identity = 388/401 (96.76%), Postives = 390/401 (97.26%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP RER+KDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRDWGRGRERDRDRDRDRDRD R RDRDRDRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRD--------RGRDRDRDRDRYRLRDDKEYSR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKR+ARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
DEPKRKKEKKEKKEGG AGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGG-AGEEDPEIAEWNRIRASLGLAPLK 392
BLAST of Carg23278 vs. ExPASy Swiss-Prot
Match:
Q8LB54 (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1)
HSP 1 Score: 452.6 bits (1163), Expect = 4.7e-126
Identity = 269/407 (66.09%), Postives = 310/407 (76.17%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61 FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRK+R++L+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRW LE G L R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP--VRERDKDRRRDSHRHRDRD 240
KS LEDDFEEEEEKE+ E I D EDE+ + R +SP RERD+DRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240
Query: 241 YDR----DRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRD 300
YDR DRD+DRDY+R+ G GR+RDR+RDRD R+RDRDR+RGRDR+RDR
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300
Query: 301 DKEYSRDRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRR 360
R+R RR RSRSRS+D RKRH
Sbjct: 301 --------------RDRARR------------RSRSRSRD------RKRH--------ET 354
Query: 361 DGAEDRDEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
D DR+EPK+KKEKKEK + +PEIAE NR+RASLG+ PL+
Sbjct: 361 DDVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354
BLAST of Carg23278 vs. ExPASy Swiss-Prot
Match:
Q7JVL3 (Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=1)
HSP 1 Score: 253.1 bits (645), Expect = 5.4e-66
Identity = 176/338 (52.07%), Postives = 222/338 (65.68%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRT AK++ GTNPQ L+EKI+RS+IY + YWKEQCF LTAE LVDKAMEL +GG
Sbjct: 1 MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGV 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
+GGN KPT F+CL +KMLQIQPEK+IV+EFIKNE++KYVR LGAFYLRLTG +D Y+YL
Sbjct: 61 YGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLY D RKLRRQ G F + ++DE IDELL D CDI LPR++KR LE + +
Sbjct: 121 EPLYIDNRKLRRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPK 180
Query: 181 KSALEDDFEEE--EEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRR-----DSHR 240
S L++D ++E ++E + N E+ + R RS R R ++R R +S R
Sbjct: 181 VSVLDEDLDDELPSDEEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSAR 240
Query: 241 HRD-----RDYDRDRD-------YDRDYDRDWGRG---RERDR-DRDRDRDRDRDRDRDR 300
RD DYDR R+ ++ DYDR G RER+R DRD R+R+RD DRDR
Sbjct: 241 SRDYYDELEDYDRQRNRVRNRDTHNEDYDRRQNNGRHDRERERQDRDSIRERERDGDRDR 300
Query: 301 GRDRDRDRDRDRYRLRDDKEYSRDRDREREGR-ERERR 315
RDR+R+R+RDR R RER+ R ER+RR
Sbjct: 301 -RDRERERERDR---------GRHDQRERDSRGERDRR 328
BLAST of Carg23278 vs. ExPASy Swiss-Prot
Match:
Q4FZQ6 (Pre-mRNA-splicing factor 38A OS=Xenopus laevis OX=8355 GN=prpf38a PE=2 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 5.2e-61
Identity = 158/320 (49.38%), Postives = 206/320 (64.38%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRT A S+ GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL +GG
Sbjct: 1 MANRTVKDAHSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
+GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR LGA Y+RLTGT D Y+YL
Sbjct: 61 YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRALGALYMRLTGTATDCYKYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRK++ Q DG F L HVDE ID+LL ++ CD+ LPR++KR+ LE T L R
Sbjct: 121 EPLYNDYRKVKVQNRDGEFELMHVDEFIDQLLHEERVCDVILPRLQKRFVLEETEQLDPR 180
Query: 181 KSALE---DDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDR 240
SALE DD E EE+ED + E H +NY R+ D+ RR S R+R
Sbjct: 181 VSALEEDMDDVESSEEEEDDDEKGRDPSPEHHRRNY-------RDLDRPRRSPSPRYRRS 240
Query: 241 DYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKE 300
R R R R+R R + R R R R+R R R + + +R +
Sbjct: 241 RSRSPRRRSRSPKRRSPSPPRRERHRSKSPRRHRSRSRER-RHRSKSKSPGHHRSHRHRS 300
Query: 301 YSRDRDREREGRERERRDRD 318
+S+ +R ++ ++ RR +
Sbjct: 301 HSKSPERSKKSHKKSRRGNE 312
BLAST of Carg23278 vs. ExPASy Swiss-Prot
Match:
Q6DHU4 (Pre-mRNA-splicing factor 38A OS=Danio rerio OX=7955 GN=prpf38a PE=2 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 6.8e-61
Identity = 162/329 (49.24%), Postives = 205/329 (62.31%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRT A S+ GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL +GG
Sbjct: 1 MANRTVKDANSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
+GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT VD Y+YL
Sbjct: 61 YGGNVKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRK++ Q +G F L HVDE IDELL + CDI LPR++KR LE L R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDPR 180
Query: 181 KSALEDDFEE----EEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRD 240
SALE+D +E EEE ++ E E H ++Y R+ D+ RR S R+R
Sbjct: 181 ISALEEDLDEVETSEEEDDEDEKPERMQSPEPHRRSY-------RDMDRPRRSPSPRYRR 240
Query: 241 RDYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDK 300
R R + R R+RDRDR R + R R R R+R R+R +
Sbjct: 241 SRSPRRRSRS---------PKRRSPSPRRERDRDRHRSKSPRRHRSRSRER-RHRSKSPG 300
Query: 301 EYSRDRDREREGRERERRDRDHHGRRRSH 326
+ R R R + H RR +
Sbjct: 301 HHRSHRHRSHSKSPESRSKKSHKRSRRGN 312
BLAST of Carg23278 vs. ExPASy Swiss-Prot
Match:
Q28H87 (Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis OX=8364 GN=prpf38a PE=2 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 6.8e-61
Identity = 157/320 (49.06%), Postives = 207/320 (64.69%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRT A S+ GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL ++GG
Sbjct: 1 MANRTVKDAHSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
+GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR LGA Y+RLTGT D Y+YL
Sbjct: 61 YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRTLGALYMRLTGTATDCYKYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRK++ Q +G F L HVDE ID+LL ++ CD+ LPR++KR+ LE T L R
Sbjct: 121 EPLYNDYRKVKVQNRNGEFELMHVDEFIDQLLHEERVCDVILPRLQKRFVLEETEQLDPR 180
Query: 181 KSALE---DDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDR 240
SALE DD E EE+ED + E H +NY R+ D+ RR S R+R
Sbjct: 181 VSALEEDMDDVESSEEEEDEDEKGRDPSPEHHRRNY-------RDLDRPRRSPSPRYRRS 240
Query: 241 DYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKE 300
R R R R+R R + R R R R+R R R + + +R +
Sbjct: 241 RSRSPRRRSRSPKRRSPSPPRRERHRSKSPRRHRSRSRER-RHRSKSKSPGHHRSHRHRS 300
Query: 301 YSRDRDREREGRERERRDRD 318
+S+ +R ++ ++ RR +
Sbjct: 301 HSKSPERSKKSHKKSRRGNE 312
BLAST of Carg23278 vs. ExPASy TrEMBL
Match:
A0A6J1FBK8 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 SV=1)
HSP 1 Score: 730.7 bits (1885), Expect = 3.3e-207
Identity = 398/401 (99.25%), Postives = 398/401 (99.25%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRD GRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
DEPKRKKEKKEKKEGG AGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGG-AGEEDPEIAEWNRIRASLGLAPLK 400
BLAST of Carg23278 vs. ExPASy TrEMBL
Match:
A0A6J1HPQ9 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=1)
HSP 1 Score: 712.6 bits (1838), Expect = 9.2e-202
Identity = 391/401 (97.51%), Postives = 392/401 (97.76%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRD GRGRERDRDRDRDRDRDRDRD R RDRDRDRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRD----RGRDRDRDRDRYRLRDDKEYSR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRD EREGRERERRDRDHHGRRRSHSR+RSRSKDREDGEYRKRHAR SASPRRRDGAEDR
Sbjct: 301 DRDGEREGRERERRDRDHHGRRRSHSRNRSRSKDREDGEYRKRHARCSASPRRRDGAEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
DEPKRKKEKKEKKEGG AGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGG-AGEEDPEIAEWNRIRASLGLAPLK 396
BLAST of Carg23278 vs. ExPASy TrEMBL
Match:
A0A1S3BXB0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1)
HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 372/401 (92.77%), Postives = 389/401 (97.01%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
+GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRR+L+DGCFSL+HVDEVIDELLTKDYSCDIALPRVKKRW LES+GSLP R
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKE+ EPIND+LED+IHEKNYYRGRSPVRERD+DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRDYDRDYDRD GRGRERDRDR+RDRDR+RDRDRD R+R+RDRDRDRYRLRD+KEY R
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRERDRDRD--RERERDRDRDRYRLRDEKEYGR 300
Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360
DRDREREGRERERRDRD GRRRSHSRSRSRSKDREDGEYRKRH+RSS SPRRRDG EDR
Sbjct: 301 DRDREREGRERERRDRD-RGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVEDR 360
Query: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
+EPK+KKEKKEKKEGG AGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 EEPKKKKEKKEKKEGG-AGEEDPEIAEWNRIRASLGLAPLK 397
BLAST of Carg23278 vs. ExPASy TrEMBL
Match:
A0A6J1G4M6 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 SV=1)
HSP 1 Score: 670.2 bits (1728), Expect = 5.2e-189
Identity = 373/405 (92.10%), Postives = 384/405 (94.81%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
+GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRW LESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKEDVEPIND+LED+IHEKNYYRGRSPVRERD+DRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300
RDRD DRDYDRD GRGRERDRDR+RDRDRDRDRD RDRDRDRDRDRY LRD+KEY R
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRD----RDRDRDRDRDRYHLRDEKEYGR 300
Query: 301 DRDREREG----RERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDG 360
DRDREREG RERERRDRD GRRRSHSRSRSRSKDREDGEYRKRH RSS SPRRR+G
Sbjct: 301 DRDREREGRERERERERRDRD-RGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNG 360
Query: 361 AEDRDEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
AEDR+EPKRKKEKKEKK G AGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 AEDREEPKRKKEKKEKK-GDGAGEEDPEIAEWNRIRASLGMAPLK 399
BLAST of Carg23278 vs. ExPASy TrEMBL
Match:
A0A6J1DS16 (Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 SV=1)
HSP 1 Score: 660.2 bits (1702), Expect = 5.4e-186
Identity = 373/418 (89.23%), Postives = 384/418 (91.87%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61 FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIA+PRVKKRW LESTG LPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240
KSALEDDFEEEEEKED E +ND LEDEIHEKN+YRGRSP RERD+DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240
Query: 241 RDRDYDRDYDRDWGRGRERD------------RDRDRDRDRDRDRDRDRGRDRDRDRDRD 300
RDRDYDRDYDRD GRGRERD RDRDRDRDRDRDRDRDR R+RDRDRDRD
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300
Query: 301 RYRLRDDKEYSRDRDREREGRERERRDRDH-HGRRRSHSRSRSRSKDREDGEYRKRHARS 360
RYRLRD+KEY RDR+REREGRER+RRDRD GRRRSHSRSRSRSKDREDGE+RKRHARS
Sbjct: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360
Query: 361 SASPRRRDGAEDRDEPKRKKEK----KEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
SASPRRRDGAED DEPKRKKEK KEKKE GA EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417
BLAST of Carg23278 vs. TAIR 10
Match:
AT2G40650.1 (PRP38 family protein )
HSP 1 Score: 452.6 bits (1163), Expect = 3.3e-127
Identity = 269/407 (66.09%), Postives = 310/407 (76.17%), Query Frame = 0
Query: 1 MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1 MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60
Query: 61 HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61 FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120
Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
EPLYNDYRK+R++L+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRW LE G L R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180
Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP--VRERDKDRRRDSHRHRDRD 240
KS LEDDFEEEEEKE+ E I D EDE+ + R +SP RERD+DRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240
Query: 241 YDR----DRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRD 300
YDR DRD+DRDY+R+ G GR+RDR+RDRD R+RDRDR+RGRDR+RDR
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300
Query: 301 DKEYSRDRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRR 360
R+R RR RSRSRS+D RKRH
Sbjct: 301 --------------RDRARR------------RSRSRSRD------RKRH--------ET 354
Query: 361 DGAEDRDEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 402
D DR+EPK+KKEKKEK + +PEIAE NR+RASLG+ PL+
Sbjct: 361 DDVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354
BLAST of Carg23278 vs. TAIR 10
Match:
AT5G37370.1 (PRP38 family protein )
HSP 1 Score: 51.2 bits (121), Expect = 2.2e-06
Identity = 107/352 (30.40%), Postives = 160/352 (45.45%), Query Frame = 0
Query: 18 QNLVEKILRSKIYQNTYWKEQCFGL-TAETLVDKAM-ELDHLGGTHGGN-RKPTPFMCLV 77
++L+EK+L I + Y+KE +GL T ++D+ +++H+ GGN R P+ CL+
Sbjct: 12 ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71
Query: 78 MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRQL 137
K ++ + + +K+ D Y+R +G YLR ++ + EP Y K +
Sbjct: 72 YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEP----YIKDDEEF 131
Query: 138 ADGCFS-LTHVDEVIDELLTKDYSCDIALPRV------KKRWNLESTGSLPARKSALEDD 197
+ G +T + + +LL Y D PR+ + NLE +LP + S D
Sbjct: 132 SPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKM-NLPTKPSGSTGD 191
Query: 198 FEEEEEKEDVEP------INDALEDEIHEKNYYRGRSPVRE----------RDKDRRRDS 257
E P ++ + + RG SPVR D+ ++R
Sbjct: 192 MTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSP 251
Query: 258 HRHRDRDYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYR 317
R + RDY DRD DR +R+ RE+DR+R+R RDR R+R+RD G DR RD D
Sbjct: 252 RRSQSRDYYSDRDSDRQRERE----REKDRERERGRDRYRERERDYGNDRRSRRDYDSRS 311
Query: 318 LRDDKEYSRDRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKR 344
R+D Y DR R H R RS SRSRSRS E KR
Sbjct: 312 RRND--YEDDRSR-------------HDRRSRSRSRSRSRSVQIEREPTPKR 338
BLAST of Carg23278 vs. TAIR 10
Match:
AT5G37370.2 (PRP38 family protein )
HSP 1 Score: 47.8 bits (112), Expect = 2.5e-05
Identity = 101/345 (29.28%), Postives = 156/345 (45.22%), Query Frame = 0
Query: 18 QNLVEKILRSKIYQNTYWKEQCFGL-TAETLVDKAM-ELDHLGGTHGGN-RKPTPFMCLV 77
++L+EK+L I + Y+KE +GL T ++D+ +++H+ GGN R P+ CL+
Sbjct: 12 ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71
Query: 78 MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRQL 137
K ++ + + +K+ D Y+R +G YLR ++ + EP D +
Sbjct: 72 YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPG- 131
Query: 138 ADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPARKSALEDDFEEEEEK 197
++G + V D L + I +P +++ + +LP + S D E
Sbjct: 132 SNGRMTTMGVYYYFDTLFPR-----IPVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSED 191
Query: 198 EDVEP------INDALEDEIHEKNYYRGRSPVRE----------RDKDRRRDSHRHRDRD 257
P ++ + + RG SPVR D+ ++R R + RD
Sbjct: 192 TARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRD 251
Query: 258 YDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEY 317
Y DRD DR +R+ RE+DR+R+R RDR R+R+RD G DR RD D R+D Y
Sbjct: 252 YYSDRDSDRQRERE----REKDRERERGRDRYRERERDYGNDRRSRRDYDSRSRRND--Y 311
Query: 318 SRDRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKR 344
DR R H R RS SRSRSRS E KR
Sbjct: 312 EDDRSR-------------HDRRSRSRSRSRSRSVQIEREPTPKR 330
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7021069.1 | 5.9e-211 | 100.00 | Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6586235.1 | 2.5e-209 | 99.75 | Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022937574.1 | 6.8e-207 | 99.25 | pre-mRNA-splicing factor 38-like [Cucurbita moschata] >XP_022937575.1 pre-mRNA-s... | [more] |
XP_022965789.1 | 1.9e-201 | 97.51 | pre-mRNA-splicing factor 38-like [Cucurbita maxima] >XP_022965790.1 pre-mRNA-spl... | [more] |
XP_023537588.1 | 5.5e-201 | 96.76 | pre-mRNA-splicing factor 38-like [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q8LB54 | 4.7e-126 | 66.09 | Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1 | [more] |
Q7JVL3 | 5.4e-66 | 52.07 | Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=... | [more] |
Q4FZQ6 | 5.2e-61 | 49.38 | Pre-mRNA-splicing factor 38A OS=Xenopus laevis OX=8355 GN=prpf38a PE=2 SV=1 | [more] |
Q6DHU4 | 6.8e-61 | 49.24 | Pre-mRNA-splicing factor 38A OS=Danio rerio OX=7955 GN=prpf38a PE=2 SV=1 | [more] |
Q28H87 | 6.8e-61 | 49.06 | Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis OX=8364 GN=prpf38a PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FBK8 | 3.3e-207 | 99.25 | Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 S... | [more] |
A0A6J1HPQ9 | 9.2e-202 | 97.51 | Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=... | [more] |
A0A1S3BXB0 | 1.1e-191 | 92.77 | Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1 | [more] |
A0A6J1G4M6 | 5.2e-189 | 92.10 | Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 S... | [more] |
A0A6J1DS16 | 5.4e-186 | 89.23 | Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 ... | [more] |