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Carg23273 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGGTCACGACATGGAAAAGGAGAGAGCTCGGTTGCGAAGCTTGGCCGCCGATTTTGGTTTCGATGAAGAATTGGCGCAGGCCTGCTTGGAATGGATAATCAATCTCTACGGTAATTTCTTGGATCTCCAGCCATTTCTGAACTCTAAAATTGCACTTCAGTTTCCTCTGCTTATCTGTTTCGCGATCTGATTGAGAACAACGGAATATCGTTTAATTGATTTTTCGTTTATTCTAAATGTACGACGCTGTAGGAATCTGGTTTTGGAGATTTTAATAAGTCTAACTTCATAGCTATGGGTTGAGGAGAAGAACTGTAACTTGTAAGGCGTATATGTCATAGGAATTTGTGGATAATTTGAGTGAGAATATAGTTATATCAACATAGAATTTAGTATAAACGTGAGATTTCACATCAGTTGGGAGGAAAACGAAACATTTTTTTATAAGTATTTGAAAATTTCTCCCAAACAAATGCAAAAGACCTTGAAAGGAAGTCCAAAGAAGACAATATCTTTTTGCAGTAGACTTAGGTGGTTACAAATGGTATTAAAGCTAGGGTGACGTGCCAGCAAAGAGGCTGAGCCCGAAGGAGATGGACACGAAGCGATGTGCCAACAAGGACGTTGGGCCCCGAACGGGGTGGATTGGGGAGTCCCACATCGATTGGAGAAGGGAACGAGTGCCGGCGAGGACGCTGGCTCCAAAGGGGTGGATCGTGAGATCCCATATCGATTGGGGAGAAGAACGAAACATTCTTTATAAGGGTGTAAAAATAACAGACGTGTTGAGGGAAAGCTCGGAAAGAAAAGCCCCAAAGAAGACAATATTTGCGAGAGGTGCCTTGGAGGTTACAATAAATTAATGGATCATAAAAACCGTTTAAAAACGGTGGGTTTAAATTTTGCTTAGATGATGTGTGTTGAGGTTATCATACTGATTAACGAGTGATATAATGTTATTATAGTGAGATTTACCAACATGGCTCTTCTAATTCCGCTATTAAAGTAAAAAGTTGGCAGTGTCGATTATCTATTTATGGAAGTGCTTCTTTGTTCAGGTGGTGATGAGCAGGAACTCGTCTCTTTAGAGTACTGTGTTAGGAACCACGACCTCTACAATGATATGATATTGTCCACTTTGAGCATAAGTTCTCATGATTTTGCTTTTGGTTTCTCGAAAAGTCTCATACCAATGGAAATGTATTACTTACTTATAAATATATGATCCTTCTCGTAATTAGAGCTAATGTGGACTCCCTCCCAACCATCCTCCCCTCAAACAAAGTACATCGTAGAGCCTCCTCTAAGACCTATGTAGCCTTGGAACAACCTCCCCTTAATCGAGATTCGACTCATTTCTCTGGAGTCCTCGAACAAAGGGAACAAAGCACACTCTTTGTTCGACACTTGAGTCACTTTTGACCATACCTTCGAGACTCACAACTTTTTTGTTCGACATTTGAGGATTCTATAGACATGACTAAGTTAAAGGGCATAACTCTAATATCATGTTAGGAACCACGACCCCCTCAATCAACATCATAAAAGATTCAATCAACATCATAAAAGATTCATCTCAAGTGGAGGAAAAACCAAATTTGGTCGATATTGATTCTTCCAGTGAAAGTGATGTTGTTGATTTCAAAGCTTCAAGGAAAAAGGATTTCAGCCGCATCATATGCATGTTACTTAATGGACAAGGATTTCAAAGTGAAAGATGTAAGATGTCAATGATTCGGGAAAAGAAAATGAAAGAGTTCTGTGAACTTAAGGTTAGTTACTCCATTTCATCCTCATGAAAGTTCCTGCCTCTTACTTAAGCATTTTACAATTTCGATGAAAGTTCCTGCCTCTTACTTTTAGCATTTTACAATTTCGATTAGTTGATGCAAACTCATGCTCCTTAA ATGGGCGGTCACGACATGGAAAAGGAGAGAGCTCGGTTGCGAAGCTTGGCCGCCGATTTTGGTTTCGATGAAGAATTGGCGCAGGCCTGCTTGGAATGGATAATCAATCTCTACGTTTCCTCTGCTTATCTGTTTCGCGATCTGATTGAGAACAACGGAATATCTGAAAGTGATGTTGTTGATTTCAAAGCTTCAAGGAAAAAGGATTTCAGCCGCATCATATGCATGTTACTTAATGGACAAGGATTTCAAAGTGAAAGATGTAAGATGTCAATGATTCGGGAAAAGAAAATGAAAGAGTTCTGTGAACTTAAGTTGATGCAAACTCATGCTCCTTAA ATGGGCGGTCACGACATGGAAAAGGAGAGAGCTCGGTTGCGAAGCTTGGCCGCCGATTTTGGTTTCGATGAAGAATTGGCGCAGGCCTGCTTGGAATGGATAATCAATCTCTACGTTTCCTCTGCTTATCTGTTTCGCGATCTGATTGAGAACAACGGAATATCTGAAAGTGATGTTGTTGATTTCAAAGCTTCAAGGAAAAAGGATTTCAGCCGCATCATATGCATGTTACTTAATGGACAAGGATTTCAAAGTGAAAGATGTAAGATGTCAATGATTCGGGAAAAGAAAATGAAAGAGTTCTGTGAACTTAAGTTGATGCAAACTCATGCTCCTTAA MGGHDMEKERARLRSLAADFGFDEELAQACLEWIINLYVSSAYLFRDLIENNGISESDVVDFKASRKKDFSRIICMLLNGQGFQSERCKMSMIREKKMKEFCELKLMQTHAP Homology
BLAST of Carg23273 vs. NCBI nr
Match: KAG7021064.1 (ATP-dependent DNA helicase Q-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 226.9 bits (577), Expect = 8.8e-56 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg23273 vs. NCBI nr
Match: KAG6586230.1 (ATP-dependent DNA helicase Q-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177.2 bits (448), Expect = 8.0e-41 Identity = 91/106 (85.85%), Postives = 97/106 (91.51%), Query Frame = 0
BLAST of Carg23273 vs. NCBI nr
Match: XP_022937581.1 (ATP-dependent DNA helicase Q-like 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 162.5 bits (410), Expect = 2.0e-36 Identity = 88/113 (77.88%), Postives = 91/113 (80.53%), Query Frame = 0
BLAST of Carg23273 vs. NCBI nr
Match: XP_022937582.1 (ATP-dependent DNA helicase Q-like 1 isoform X2 [Cucurbita moschata]) HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36 Identity = 88/112 (78.57%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of Carg23273 vs. NCBI nr
Match: XP_038890742.1 (ATP-dependent DNA helicase Q-like 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-06 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Carg23273 vs. ExPASy Swiss-Prot
Match: Q9FT74 (ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.0e-06 Identity = 32/100 (32.00%), Postives = 56/100 (56.00%), Query Frame = 0
BLAST of Carg23273 vs. ExPASy TrEMBL
Match: A0A6J1FAR0 (ATP-dependent DNA helicase Q-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443947 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 9.9e-37 Identity = 88/113 (77.88%), Postives = 91/113 (80.53%), Query Frame = 0
BLAST of Carg23273 vs. ExPASy TrEMBL
Match: A0A6J1FBL8 (ATP-dependent DNA helicase Q-like 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443947 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.3e-36 Identity = 88/112 (78.57%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of Carg23273 vs. ExPASy TrEMBL
Match: A0A6J1G2P3 (ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111450250 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Carg23273 vs. ExPASy TrEMBL
Match: A0A6J1G2P3 (ATP-dependent DNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111450250 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
HSP 2 Score: 62.0 bits (149), Expect = 1.8e-06 Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of Carg23273 vs. ExPASy TrEMBL
Match: A0A6J1KGC2 (ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111493646 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.9e-06 Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0
HSP 2 Score: 61.6 bits (148), Expect = 2.4e-06 Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
BLAST of Carg23273 vs. TAIR 10
Match: AT3G05740.1 (RECQ helicase l1 ) HSP 1 Score: 54.3 bits (129), Expect = 7.3e-08 Identity = 32/100 (32.00%), Postives = 56/100 (56.00%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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