Homology
BLAST of Carg23269 vs. NCBI nr
Match:
KAG7021060.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 857.1 bits (2213), Expect = 6.6e-245
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query: 1 MDVQNHFHRPPAPSFILCNSVLLLLSVYRTNILRNMSKNYRNIERRILRLLSGHKSPTHL 60
MDVQNHFHRPPAPSFILCNSVLLLLSVYRTNILRNMSKNYRNIERRILRLLSGHKSPTHL
Sbjct: 1 MDVQNHFHRPPAPSFILCNSVLLLLSVYRTNILRNMSKNYRNIERRILRLLSGHKSPTHL 60
Query: 61 TQIHAHFLRHDLHQSNQILAHFISICGASNQIAYANRVFSQSQNPNIFLFNSMIKAHSLS 120
TQIHAHFLRHDLHQSNQILAHFISICGASNQIAYANRVFSQSQNPNIFLFNSMIKAHSLS
Sbjct: 61 TQIHAHFLRHDLHQSNQILAHFISICGASNQIAYANRVFSQSQNPNIFLFNSMIKAHSLS 120
Query: 121 GPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECFGSIR 180
GPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECFGSIR
Sbjct: 121 GPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECFGSIR 180
Query: 181 IGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMNDRSLV 240
IGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMNDRSLV
Sbjct: 181 IGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMNDRSLV 240
Query: 241 SWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVGQMIHSYA 300
SWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVGQMIHSYA
Sbjct: 241 SWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVGQMIHSYA 300
Query: 301 TSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGKGELA 360
TSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGKGELA
Sbjct: 301 TSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGKGELA 360
Query: 361 IDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKEGRWEDVENVRRSMRGKNVKKAPGRS 420
IDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKEGRWEDVENVRRSMRGKNVKKAPGRS
Sbjct: 361 IDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKEGRWEDVENVRRSMRGKNVKKAPGRS 420
Query: 421 ASG 424
ASG
Sbjct: 421 ASG 423
BLAST of Carg23269 vs. NCBI nr
Match:
XP_022937515.1 (pentatricopeptide repeat-containing protein At1g09190 [Cucurbita moschata])
HSP 1 Score: 729.9 bits (1883), Expect = 1.2e-206
Identity = 380/484 (78.51%), Postives = 386/484 (79.75%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASN+IAYA
Sbjct: 1 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNEIAYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL
Sbjct: 61 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMD+AQKVFDEMP RDVVVWNLMI
Sbjct: 121 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDDAQKVFDEMPRRDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQ+EEHGFEPDEV
Sbjct: 181 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQIEEHGFEPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGALDVGQMIHSYATSKADL+NTTMVGNSLIDFYCKSGNTERAYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALDVGQMIHSYATSKADLMNTTMVGNSLIDFYCKSGNTERAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCK+VVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK
Sbjct: 301 MTCKNVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 REVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. NCBI nr
Match:
XP_023538021.1 (pentatricopeptide repeat-containing protein At1g09190 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 724.2 bits (1868), Expect = 6.7e-205
Identity = 378/484 (78.10%), Postives = 383/484 (79.13%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGA N+IAYA
Sbjct: 1 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGAFNEIAYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL
Sbjct: 61 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
YDYRLGKCVIGEVLRRGFE FGSIRIGVVELYVCCE+MD+AQKVFDEMP RDVVVWNLMI
Sbjct: 121 YDYRLGKCVIGEVLRRGFEWFGSIRIGVVELYVCCERMDDAQKVFDEMPQRDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEAL+LFQQMEEHGFEPDEV
Sbjct: 181 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALKLFQQMEEHGFEPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTE+AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTEKAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCKSVVSWNTMILGFALNGKGELAIDLF EMGRGD KPNDATLVAILTACVHSGLLEK
Sbjct: 301 MTCKSVVSWNTMILGFALNGKGELAIDLFTEMGRGDAKPNDATLVAILTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 REVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. NCBI nr
Match:
XP_022965696.1 (pentatricopeptide repeat-containing protein At1g09190 [Cucurbita maxima])
HSP 1 Score: 723.4 bits (1866), Expect = 1.1e-204
Identity = 375/484 (77.48%), Postives = 382/484 (78.93%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICG N+IAYA
Sbjct: 1 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGGFNEIAYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
NRVFSQSQNPNIFLFNSMIKAHSLSGPF+QSLLLFSS+KNRRIVPDEYTFAPLLKSCSNL
Sbjct: 61 NRVFSQSQNPNIFLFNSMIKAHSLSGPFEQSLLLFSSLKNRRIVPDEYTFAPLLKSCSNL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCE+MD+AQKVFDEMPH DVVVWNLMI
Sbjct: 121 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCERMDDAQKVFDEMPHTDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV
Sbjct: 181 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGA+DVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK
Sbjct: 241 TVVTMLPVCSRLGAIDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCKSVVSWNTMILGFALNGKGELAIDLFMEMG+GD KPND TLVAILTACVHSGLLEK
Sbjct: 301 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGQGDAKPNDVTLVAILTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 QEVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. NCBI nr
Match:
XP_038890516.1 (pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida])
HSP 1 Score: 621.3 bits (1601), Expect = 6.1e-174
Identity = 323/484 (66.74%), Postives = 352/484 (72.73%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
M+KN IERRILRLL G KS THLT+IHAHFLRH LHQSNQILAHFISIC A N I+YA
Sbjct: 1 MNKNCLEIERRILRLLHGEKSRTHLTEIHAHFLRHGLHQSNQILAHFISICAAFNHISYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
+R+FSQS NPNIFLFNS+IKAHSL PFQQSLLLFSSMKN RIVPDEYTFAPLLKSC+NL
Sbjct: 61 SRLFSQSHNPNIFLFNSIIKAHSLCPPFQQSLLLFSSMKNHRIVPDEYTFAPLLKSCANL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
+Y LG+CVI EVLRRGF CFGSIRIGVVELYVCCE+M++A+KVFDEMPHRDVVVWNLMI
Sbjct: 121 REYSLGQCVIAEVLRRGFYCFGSIRIGVVELYVCCERMEDARKVFDEMPHRDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVD GL LFRQMN+RSL+SWNT +SCLAQS D EALELFQQMEE GF+PDEV
Sbjct: 181 RGFCKMGNVDFGLYLFRQMNERSLISWNTMLSCLAQSRCDAEALELFQQMEECGFKPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGALDVGQ IH+YA+SK D+V+ T +GNSL+DFYCK GN ERAYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALDVGQRIHNYASSKGDMVDNTTIGNSLVDFYCKCGNVERAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCKSVVSWNTMILGFALNG GE AIDLFM+MG+ DVKPNDAT VA+LTACVHSGLLEK
Sbjct: 301 MTCKSVVSWNTMILGFALNGNGEFAIDLFMKMGKEDVKPNDATFVAVLTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 RELFSSMADKYEIQPKLEHFGCMVDLLGRGGCLEEAHNLIKSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. ExPASy Swiss-Prot
Match:
O80488 (Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E70 PE=2 SV=1)
HSP 1 Score: 416.0 bits (1068), Expect = 5.1e-115
Identity = 210/353 (59.49%), Postives = 262/353 (74.22%), Query Frame = 0
Query: 43 IERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYANRVFSQS 102
IER++LRLL GH + T L +IHAH LRH LH SN +LAHFISICG+ + YANRVFS
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI 62
Query: 103 QNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGK 162
QNPN+ +FN+MIK +SL GP +SL FSSMK+R I DEYT+APLLKSCS+L D R GK
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 163 CVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMG 222
CV GE++R GF G IRIGVVELY +M +AQKVFDEM R+VVVWNLMIRGFC G
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 223 NVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLP 282
+V+ GL LF+QM++RS+VSWN+ IS L++ GRD EALELF +M + GF+PDE TVVT+LP
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 283 VCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVV 342
+ + LG LD G+ IHS A S + VGN+L+DFYCKSG+ E A IF+KM ++VV
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVV 302
Query: 343 SWNTMILGFALNGKGELAIDLFMEM-GRGDVKPNDATLVAILTACVHSGLLEK 395
SWNT+I G A+NGKGE IDLF M G V PN+AT + +L C ++G +E+
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
BLAST of Carg23269 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 2.2e-62
Identity = 125/362 (34.53%), Postives = 212/362 (58.56%), Query Frame = 0
Query: 41 RNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYANRVFS 100
R +E + L KS +I+A + H L QS+ ++ + C + YA R+F+
Sbjct: 7 REVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFN 66
Query: 101 QSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRI-VPDEYTFAPLLKSCSNLYDYR 160
Q NPN+FL+NS+I+A++ + + + ++ + + +PD +TF + KSC++L
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 161 LGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFC 220
LGK V G + + G ++++Y+ + + +A KVFDEM RDV+ WN ++ G+
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 221 KMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVT 280
++G + LF M D+++VSW IS G VEA++ F++M+ G EPDE+++++
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 281 MLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCK 340
+LP C++LG+L++G+ IH YA + + T V N+LI+ Y K G +A +F +M K
Sbjct: 247 VLPSCAQLGSLELGKWIHLYA-ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 306
Query: 341 SVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKEGRWE 400
V+SW+TMI G+A +G AI+ F EM R VKPN T + +L+AC H G+ ++ R+
Sbjct: 307 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 366
Query: 401 DV 402
D+
Sbjct: 367 DM 367
BLAST of Carg23269 vs. ExPASy Swiss-Prot
Match:
Q9FFG8 (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H17 PE=2 SV=1)
HSP 1 Score: 228.0 bits (580), Expect = 2.0e-58
Identity = 125/343 (36.44%), Postives = 194/343 (56.56%), Query Frame = 0
Query: 60 LTQIHAHFLRHDLHQSNQILAHFISICGASN--QIAYANRVFSQSQNPNIFLFNSMIKAH 119
+ QIH H LR L QS IL I YA RV Q N FL+ ++I+ +
Sbjct: 65 IKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 120 SLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLR-RGFECF 179
++ G F +++ ++ M+ I P +TF+ LLK+C + D LG+ + R RGF CF
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF-CF 184
Query: 180 GSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMND 239
+ ++++YV CE +D A+KVFDEMP RDV+ W +I + ++GN++ LF +
Sbjct: 185 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 244
Query: 240 RSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG--- 299
+ +V+W ++ AQ+ + EALE F +ME+ G DEVTV + C++LGA
Sbjct: 245 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 304
Query: 300 -QMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFA 359
Q+ S +D V ++G++LID Y K GN E A N+F M K+V ++++MILG A
Sbjct: 305 VQIAQKSGYSPSDHV---VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLA 364
Query: 360 LNGKGELAIDLFMEM-GRGDVKPNDATLVAILTACVHSGLLEK 395
+G+ + A+ LF M + ++KPN T V L AC HSGL+++
Sbjct: 365 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQ 403
BLAST of Carg23269 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 3.4e-58
Identity = 125/338 (36.98%), Postives = 191/338 (56.51%), Query Frame = 0
Query: 60 LTQIHAHFLRHDLHQSNQILAHFISIC---GASNQIAYANRVFSQSQNPNIFLFNSMIKA 119
L QIHA L+ L Q + + F+S C +S+ + YA VF P+ FL+N MI+
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 120 HSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECF 179
S S ++SLLL+ M + YTF LLK+CSNL + + ++ + G+E
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 180 GSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMND 239
++ Y A +FD +P D V WN +I+G+ K G +D+ L+LFR+M +
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 240 RSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVGQMI 299
++ +SW T IS Q+ + EAL+LF +M+ EPD V++ L C++LGAL+ G+ I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 300 HSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGK 359
HSY +K + +++G LID Y K G E A +F+ + KSV +W +I G+A +G
Sbjct: 270 HSY-LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 329
Query: 360 GELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK 395
G AI FMEM + +KPN T A+LTAC ++GL+E+
Sbjct: 330 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
BLAST of Carg23269 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 3.4e-58
Identity = 125/354 (35.31%), Postives = 202/354 (57.06%), Query Frame = 0
Query: 48 LRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGAS---NQIAYANRVFSQSQN 107
L LL K+ L IHA ++ LH +N L+ I C S + YA VF Q
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 108 PNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCV 167
PN+ ++N+M + H+LS +L L+ M + ++P+ YTF +LKSC+ ++ G+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 168 IGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNV 227
G VL+ G + + ++ +YV ++++A KVFD+ PHRDVV + +I+G+ G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 228 DLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVC 287
+ LF ++ + +VSWN IS A++G EALELF+ M + PDE T+VT++ C
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 288 SRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSW 347
++ G++++G+ +H + N +V N+LID Y K G E A +F+++ K V+SW
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIV-NALIDLYSKCGELETACGLFERLPYKDVISW 336
Query: 348 NTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKEGRW 399
NT+I G+ + A+ LF EM R PND T+++IL AC H G ++ GRW
Sbjct: 337 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID-IGRW 388
BLAST of Carg23269 vs. ExPASy TrEMBL
Match:
A0A6J1FGY4 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita moschata OX=3662 GN=LOC111443903 PE=4 SV=1)
HSP 1 Score: 729.9 bits (1883), Expect = 5.9e-207
Identity = 380/484 (78.51%), Postives = 386/484 (79.75%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASN+IAYA
Sbjct: 1 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNEIAYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL
Sbjct: 61 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMD+AQKVFDEMP RDVVVWNLMI
Sbjct: 121 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDDAQKVFDEMPRRDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQ+EEHGFEPDEV
Sbjct: 181 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQIEEHGFEPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGALDVGQMIHSYATSKADL+NTTMVGNSLIDFYCKSGNTERAYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALDVGQMIHSYATSKADLMNTTMVGNSLIDFYCKSGNTERAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCK+VVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK
Sbjct: 301 MTCKNVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 REVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. ExPASy TrEMBL
Match:
A0A6J1HMD5 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita maxima OX=3661 GN=LOC111465519 PE=4 SV=1)
HSP 1 Score: 723.4 bits (1866), Expect = 5.5e-205
Identity = 375/484 (77.48%), Postives = 382/484 (78.93%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICG N+IAYA
Sbjct: 1 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGGFNEIAYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
NRVFSQSQNPNIFLFNSMIKAHSLSGPF+QSLLLFSS+KNRRIVPDEYTFAPLLKSCSNL
Sbjct: 61 NRVFSQSQNPNIFLFNSMIKAHSLSGPFEQSLLLFSSLKNRRIVPDEYTFAPLLKSCSNL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCE+MD+AQKVFDEMPH DVVVWNLMI
Sbjct: 121 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCERMDDAQKVFDEMPHTDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV
Sbjct: 181 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGA+DVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK
Sbjct: 241 TVVTMLPVCSRLGAIDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCKSVVSWNTMILGFALNGKGELAIDLFMEMG+GD KPND TLVAILTACVHSGLLEK
Sbjct: 301 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGQGDAKPNDVTLVAILTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 QEVFSSMAEKYEIEPKLEHFGCMVDLLGRGGCVEEAHSLIRSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. ExPASy TrEMBL
Match:
A0A6J1DUP9 (pentatricopeptide repeat-containing protein At1g09190 OS=Momordica charantia OX=3673 GN=LOC111023267 PE=4 SV=1)
HSP 1 Score: 618.6 bits (1594), Expect = 1.9e-173
Identity = 324/484 (66.94%), Postives = 353/484 (72.93%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
M+KN+R IER+ILRLL GHK+ HLTQ HAHFLRH LHQSNQILAHFISICGA +++ YA
Sbjct: 1 MNKNFREIERKILRLLHGHKTRMHLTQTHAHFLRHGLHQSNQILAHFISICGALDKMPYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
RVFSQSQNPNIFLFNSMIKAHSL GPF+QSLLLFSSMK +RIVPDEYTFAPLLKSCSNL
Sbjct: 61 IRVFSQSQNPNIFLFNSMIKAHSLCGPFEQSLLLFSSMKKQRIVPDEYTFAPLLKSCSNL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
DY+LG+CV GEVLRRGFE FGSIRIGVVELYVCCE+M++A+KVFD MPHRDV+VWNLMI
Sbjct: 121 CDYKLGQCVKGEVLRRGFEYFGSIRIGVVELYVCCERMEDAKKVFDAMPHRDVIVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCK GNVDLG+ LFRQM+DRS+VSWNT ISCLAQSGRDVEALELFQQMEE GF PDEV
Sbjct: 181 RGFCKTGNVDLGIYLFRQMSDRSIVSWNTIISCLAQSGRDVEALELFQQMEEQGFAPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVT+LPVCSRLGA VGQ IH+YA+SK +LV+ T VGNSL+DFYCK GNTE AYNIF K
Sbjct: 241 TVVTILPVCSRLGAPVVGQRIHAYASSKGNLVDITFVGNSLLDFYCKCGNTEGAYNIFNK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCKSVVSWNTMILGFALNGKGELA DLFMEMGR DVKPNDAT VA+LTACVHSGLLEK
Sbjct: 301 MTCKSVVSWNTMILGFALNGKGELATDLFMEMGRKDVKPNDATFVALLTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 REIFSSMMHKYKIVPKLEHFGCMVDLLGRSGLVEEAHNLIKSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. ExPASy TrEMBL
Match:
A0A5A7U1F2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001240 PE=4 SV=1)
HSP 1 Score: 615.5 bits (1586), Expect = 1.6e-172
Identity = 323/484 (66.74%), Postives = 349/484 (72.11%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
MSKN IERRILRLL GHKS THLTQIHAHFLRH LHQSNQILAHFIS+C + N+I YA
Sbjct: 1 MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIGYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
+R+FSQS NPNIFLFNS+IKAHSLS PF QSLLLFS MKN RIVPD+YTFAPLLKSC+NL
Sbjct: 61 DRLFSQSHNPNIFLFNSIIKAHSLSPPFHQSLLLFSLMKNHRIVPDQYTFAPLLKSCANL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
+Y LG+CVI EVL RGF CFGSIRIGVVELYVCCEKM++A K FDEM HRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEKMEDAWKAFDEMSHRDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVD GL LFRQM++RSLVSWNT ISCLAQ+ RDVEALELFQQMEEHGF+PDEV
Sbjct: 181 RGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGAL+VGQ IHSY +SK +LV TTMVGNSLIDFYCK GN E AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCKSVVSWNT+ILGFALNGKGE AIDLFMEM + DVKPNDAT VA+LTACVHSGLLEK
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. ExPASy TrEMBL
Match:
A0A1S3BXN7 (pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN=LOC103494345 PE=4 SV=1)
HSP 1 Score: 615.5 bits (1586), Expect = 1.6e-172
Identity = 323/484 (66.74%), Postives = 349/484 (72.11%), Query Frame = 0
Query: 36 MSKNYRNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYA 95
MSKN IERRILRLL GHKS THLTQIHAHFLRH LHQSNQILAHFIS+C + N+I YA
Sbjct: 1 MSKNCMEIERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIGYA 60
Query: 96 NRVFSQSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNL 155
+R+FSQS NPNIFLFNS+IKAHSLS PF QSLLLFS MKN RIVPD+YTFAPLLKSC+NL
Sbjct: 61 DRLFSQSHNPNIFLFNSIIKAHSLSPPFHQSLLLFSLMKNHRIVPDQYTFAPLLKSCANL 120
Query: 156 YDYRLGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMI 215
+Y LG+CVI EVL RGF CFGSIRIGVVELYVCCEKM++A K FDEM HRDVVVWNLMI
Sbjct: 121 CEYSLGQCVISEVLHRGFYCFGSIRIGVVELYVCCEKMEDAWKAFDEMSHRDVVVWNLMI 180
Query: 216 RGFCKMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEV 275
RGFCKMGNVD GL LFRQM++RSLVSWNT ISCLAQ+ RDVEALELFQQMEEHGF+PDEV
Sbjct: 181 RGFCKMGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
Query: 276 TVVTMLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQK 335
TVVTMLPVCSRLGAL+VGQ IHSY +SK +LV TTMVGNSLIDFYCK GN E AYNIFQK
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYTSSKGNLVGTTMVGNSLIDFYCKCGNIESAYNIFQK 300
Query: 336 MTCKSVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK- 395
MTCKSVVSWNT+ILGFALNGKGE AIDLFMEM + DVKPNDAT VA+LTACVHSGLLEK
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEDVKPNDATFVAVLTACVHSGLLEKG 360
Query: 396 ------------------------------------------------------------ 424
Sbjct: 361 RELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHNLIKSMPMQPNATLWGALLGACR 420
BLAST of Carg23269 vs. TAIR 10
Match:
AT1G09190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 416.0 bits (1068), Expect = 3.6e-116
Identity = 210/353 (59.49%), Postives = 262/353 (74.22%), Query Frame = 0
Query: 43 IERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYANRVFSQS 102
IER++LRLL GH + T L +IHAH LRH LH SN +LAHFISICG+ + YANRVFS
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI 62
Query: 103 QNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGK 162
QNPN+ +FN+MIK +SL GP +SL FSSMK+R I DEYT+APLLKSCS+L D R GK
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 163 CVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMG 222
CV GE++R GF G IRIGVVELY +M +AQKVFDEM R+VVVWNLMIRGFC G
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 223 NVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLP 282
+V+ GL LF+QM++RS+VSWN+ IS L++ GRD EALELF +M + GF+PDE TVVT+LP
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 283 VCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVV 342
+ + LG LD G+ IHS A S + VGN+L+DFYCKSG+ E A IF+KM ++VV
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVV 302
Query: 343 SWNTMILGFALNGKGELAIDLFMEM-GRGDVKPNDATLVAILTACVHSGLLEK 395
SWNT+I G A+NGKGE IDLF M G V PN+AT + +L C ++G +E+
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
BLAST of Carg23269 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 241.1 bits (614), Expect = 1.6e-63
Identity = 125/362 (34.53%), Postives = 212/362 (58.56%), Query Frame = 0
Query: 41 RNIERRILRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGASNQIAYANRVFS 100
R +E + L KS +I+A + H L QS+ ++ + C + YA R+F+
Sbjct: 7 REVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFN 66
Query: 101 QSQNPNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRI-VPDEYTFAPLLKSCSNLYDYR 160
Q NPN+FL+NS+I+A++ + + + ++ + + +PD +TF + KSC++L
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 161 LGKCVIGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFC 220
LGK V G + + G ++++Y+ + + +A KVFDEM RDV+ WN ++ G+
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 221 KMGNVDLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVT 280
++G + LF M D+++VSW IS G VEA++ F++M+ G EPDE+++++
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 281 MLPVCSRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCK 340
+LP C++LG+L++G+ IH YA + + T V N+LI+ Y K G +A +F +M K
Sbjct: 247 VLPSCAQLGSLELGKWIHLYA-ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 306
Query: 341 SVVSWNTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKEGRWE 400
V+SW+TMI G+A +G AI+ F EM R VKPN T + +L+AC H G+ ++ R+
Sbjct: 307 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 366
Query: 401 DV 402
D+
Sbjct: 367 DM 367
BLAST of Carg23269 vs. TAIR 10
Match:
AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 228.0 bits (580), Expect = 1.4e-59
Identity = 125/343 (36.44%), Postives = 194/343 (56.56%), Query Frame = 0
Query: 60 LTQIHAHFLRHDLHQSNQILAHFISICGASN--QIAYANRVFSQSQNPNIFLFNSMIKAH 119
+ QIH H LR L QS IL I YA RV Q N FL+ ++I+ +
Sbjct: 65 IKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 120 SLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLR-RGFECF 179
++ G F +++ ++ M+ I P +TF+ LLK+C + D LG+ + R RGF CF
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF-CF 184
Query: 180 GSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMND 239
+ ++++YV CE +D A+KVFDEMP RDV+ W +I + ++GN++ LF +
Sbjct: 185 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 244
Query: 240 RSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVG--- 299
+ +V+W ++ AQ+ + EALE F +ME+ G DEVTV + C++LGA
Sbjct: 245 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 304
Query: 300 -QMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFA 359
Q+ S +D V ++G++LID Y K GN E A N+F M K+V ++++MILG A
Sbjct: 305 VQIAQKSGYSPSDHV---VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLA 364
Query: 360 LNGKGELAIDLFMEM-GRGDVKPNDATLVAILTACVHSGLLEK 395
+G+ + A+ LF M + ++KPN T V L AC HSGL+++
Sbjct: 365 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQ 403
BLAST of Carg23269 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 227.3 bits (578), Expect = 2.4e-59
Identity = 125/354 (35.31%), Postives = 202/354 (57.06%), Query Frame = 0
Query: 48 LRLLSGHKSPTHLTQIHAHFLRHDLHQSNQILAHFISICGAS---NQIAYANRVFSQSQN 107
L LL K+ L IHA ++ LH +N L+ I C S + YA VF Q
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 108 PNIFLFNSMIKAHSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCV 167
PN+ ++N+M + H+LS +L L+ M + ++P+ YTF +LKSC+ ++ G+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 168 IGEVLRRGFECFGSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNV 227
G VL+ G + + ++ +YV ++++A KVFD+ PHRDVV + +I+G+ G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 228 DLGLSLFRQMNDRSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVC 287
+ LF ++ + +VSWN IS A++G EALELF+ M + PDE T+VT++ C
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 288 SRLGALDVGQMIHSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSW 347
++ G++++G+ +H + N +V N+LID Y K G E A +F+++ K V+SW
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIV-NALIDLYSKCGELETACGLFERLPYKDVISW 336
Query: 348 NTMILGFALNGKGELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEKEGRW 399
NT+I G+ + A+ LF EM R PND T+++IL AC H G ++ GRW
Sbjct: 337 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID-IGRW 388
BLAST of Carg23269 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 227.3 bits (578), Expect = 2.4e-59
Identity = 125/338 (36.98%), Postives = 191/338 (56.51%), Query Frame = 0
Query: 60 LTQIHAHFLRHDLHQSNQILAHFISIC---GASNQIAYANRVFSQSQNPNIFLFNSMIKA 119
L QIHA L+ L Q + + F+S C +S+ + YA VF P+ FL+N MI+
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 120 HSLSGPFQQSLLLFSSMKNRRIVPDEYTFAPLLKSCSNLYDYRLGKCVIGEVLRRGFECF 179
S S ++SLLL+ M + YTF LLK+CSNL + + ++ + G+E
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 180 GSIRIGVVELYVCCEKMDNAQKVFDEMPHRDVVVWNLMIRGFCKMGNVDLGLSLFRQMND 239
++ Y A +FD +P D V WN +I+G+ K G +D+ L+LFR+M +
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 240 RSLVSWNTTISCLAQSGRDVEALELFQQMEEHGFEPDEVTVVTMLPVCSRLGALDVGQMI 299
++ +SW T IS Q+ + EAL+LF +M+ EPD V++ L C++LGAL+ G+ I
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 300 HSYATSKADLVNTTMVGNSLIDFYCKSGNTERAYNIFQKMTCKSVVSWNTMILGFALNGK 359
HSY +K + +++G LID Y K G E A +F+ + KSV +W +I G+A +G
Sbjct: 270 HSY-LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 329
Query: 360 GELAIDLFMEMGRGDVKPNDATLVAILTACVHSGLLEK 395
G AI FMEM + +KPN T A+LTAC ++GL+E+
Sbjct: 330 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7021060.1 | 6.6e-245 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022937515.1 | 1.2e-206 | 78.51 | pentatricopeptide repeat-containing protein At1g09190 [Cucurbita moschata] | [more] |
XP_023538021.1 | 6.7e-205 | 78.10 | pentatricopeptide repeat-containing protein At1g09190 [Cucurbita pepo subsp. pep... | [more] |
XP_022965696.1 | 1.1e-204 | 77.48 | pentatricopeptide repeat-containing protein At1g09190 [Cucurbita maxima] | [more] |
XP_038890516.1 | 6.1e-174 | 66.74 | pentatricopeptide repeat-containing protein At1g09190 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
O80488 | 5.1e-115 | 59.49 | Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 2.2e-62 | 34.53 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9FFG8 | 2.0e-58 | 36.44 | Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 3.4e-58 | 36.98 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 3.4e-58 | 35.31 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FGY4 | 5.9e-207 | 78.51 | pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HMD5 | 5.5e-205 | 77.48 | pentatricopeptide repeat-containing protein At1g09190 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1DUP9 | 1.9e-173 | 66.94 | pentatricopeptide repeat-containing protein At1g09190 OS=Momordica charantia OX=... | [more] |
A0A5A7U1F2 | 1.6e-172 | 66.74 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BXN7 | 1.6e-172 | 66.74 | pentatricopeptide repeat-containing protein At1g09190 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09190.1 | 3.6e-116 | 59.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 1.6e-63 | 34.53 | mitochondrial editing factor 21 | [more] |
AT5G44230.1 | 1.4e-59 | 36.44 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 2.4e-59 | 35.31 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 2.4e-59 | 36.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |