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Carg23268 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCGTCCCTTGGGTTGTGGCAAAAGGAGGCCAAGATCCTTTTCTTAGGGCTTGATAATGCTGGAAAGACGACCTTGCTTCATATGTTGAAAGATGAGGTGTGTGATTTTTTTTGTTAATTCACTTTTCTTAATCTGTGTACATGATTTAAAATTGATGAAATCCATTCGATGGAGAGATAGCAATGTTCCGCGTCTTGAGACTCGAGATTGTTCGTTGTTTTTAAATTAATTCAATTGATGTATGGATTCATGTTTTAGAAAGCATCTAATAGTTACTTTGCCTTCATTTCTCAACGTTTTCTTAAATCTGATTTTTTGATTAGATTTACTAGAATGTGAGGTTTTGACTTAGCGGCTAATATAAGAGTTGTTGTTGTCATATTGCAGAGATTAGTTCAACACCAGCCGACTCAGCATCCGACTTCCGAAGAGTTGAGCATTGGCAAGATAAAGTTCAAGGCCTTTGACCTTGGAGGACATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTATATTTGATTTGAAAGATCCCACATCATAGCTTTATTTTATTTGAGTTCCAAGTTTCAGTTGACCAAATAAATAATTTTCTGTGGAATCGCGGGTTGAATTTCTTGAGAAATGAAAATTTTGAACTCCTGCAATTTTTGAACTTGAAGTTGTGAAATGTGTTCAAACACTGAACTATTTCATCAGTTCCAAAATGTTTCCATGCCCTCATAATCATAGACAGAGCTTTTTATGTTTTTTTCTGCTTTTAGTATTTCATTGTACATTTTTCTTGTTAGTCAAACTGTTTTTCGACTGCAAGTTATACTTGCTGAATATTCATACATCATTTACCACATTTGAGACCTCAGGTACTAAGTTACACCATATTCTCTTCTTTGAGAAACACCTTTGCTTCCAAATTCTAGCTACGGTTTTCAACATATGTTGATTTCCTCTACCGTTGCGGTTATTTGAAATTTGAACTTATCATTTCCAAATGTTTTTCTGCCTTCATAATCCCAGACAAACTCTTGTTGTATTTTTCTGATTCATGGGAGGCAGAAATTACATGGTTATTCGCTGATTGCATGTCTTCTCGTTGAAAAAGGTCTGCTTATAGTTCATAACCATACATTTTTATCGTAAAATTCCTACCGTTCAAGTGATACTTACTGAAGTTTTCTAACCCATTTATGATTTATCATATTTGTGATTCCATTTTACTCCACTTCTGCCTTCTCTATGGTGTCAACATACGTCAATTTCATCTACGTTTATGGTTATTTGAACTCTGTACAATCTCTCTGTGTTCAAATATTACCCTGCCTTCATAATCCCGGACTAACCTTATTGTGTTTTTCTGATTCATGGGACAAAAATCATGTGGTTATTCGCTGATAGCATATCTTCTATGTAAAAGGATCTGCTTTTAGTACATAACCATACATTTTCCTTGTCTTCAAAACTTTTATTAACTTTAAGTAATACCTACTAATATTTAATACGACATTTACGATATTTGAATCTGAAGTGCCACTGTGATACTGTATTGCCTTCTTCAAGGAGGAAGGATTGAAAACTTTGCTTCCAAATGTGTTACCAACTGAGTGTTTTCAAAATGTTACCCTGCCTTCGTAAACCCAGACCAACCTCTTTGTGCTTTTTCGACTCATGGGAGGCAGAAATTATATGGTTATTCACTGATAGCATATCTTCTCCTTGAAAAGTGTCTGCTTTTAGTATATATCCACATGTTTTTCTTGTCATCCAAACTATCCTTGGACTATAAATTGTACCTACTGGTATTTTGTAAGACATTTACCATATTTGAAATCCGATGTACTGAATTACCACATTGCCCTCTTCGAGAAAAGACTGAAAGCTTTGATTCCAAATATTAGCAAATTTAATGTACATCCTTTTGTCTAACCCATTGTAGTTATTCAAACACCGAACCCCATCTCAACGATTTCAAGACATATCCCTGCCTTCATAATCCTATACAAACCTTTTTTGTGTTGTATTGCCTTCTTGTAGGAGGAAATTGAAAGCTCTGCGGTTTTAACATACAAGTATGTTAGCCTCTGCGATTTTTTTTCTCTCTAACAATCTCATTGTTTTAAAAATGTTTACCTGCCTTCATAATCCCAGACAAACTCTTTTTTTGTGGTTTTCTGATTCATGGGAGGCAGAAATTTCATGGTTATTCGCTGATAGCATATCTTCTCACAGAAAGGATATGTTTCTAGTACATAACCACAAATTTTTCTCATCATTAATACCATTCATTAACTATAAGTTGTACCTACTGAAATTTTATATGACAATAACTTCTTTTGAGATCCCAAGTTCTTGATTATTATAATGGCTTATAGGAAGGGAAAAAGTTGTTACCTTTGCTTTCTAGTACTACTATGGTTTTAACATGCATGTTGAATTCATCTACCTTTGTGCAACTGTACCTATAATATGTGGCCCTTCACATGTTTCAAAAGCATTTGTCTGCTGACCCTGTCTTATTTAGGACAAGCTCTCTGTTTTGTTGAGCTGTTTAGTTGCTATTACATGATCTTATATGCCGATATGGTTCCTTATTATGTTGTCATTGTTGTGAAGGTGGATGCAGTAGTTTATCTGGTTGATGCATATGACAAGGAGAGATTTGCCGAGTCGAAAAAAGAGTTGGATGCGCTCCTCTCCGATGAAGCATTGGCAGACGTTCCATTCCTGATTCTAGGTAACAAGATTGATATTTCATATGCTGCATCCGAAGACGAGTTACGGTACAACTTGGGGCTAACAAACTTCACGACTGGCAAGGGCAAGGTAACCATGTCTGACTCTAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTGAGAAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG ATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCGTCCCTTGGGTTGTGGCAAAAGGAGGCCAAGATCCTTTTCTTAGGGCTTGATAATGCTGGAAAGACGACCTTGCTTCATATGTTGAAAGATGAGAGATTAGTTCAACACCAGCCGACTCAGCATCCGACTTCCGAAGAGTTGAGCATTGGCAAGATAAAGTTCAAGGCCTTTGACCTTGGAGGACATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTGGATGCAGTAGTTTATCTGGTTGATGCATATGACAAGGAGAGATTTGCCGAGTCGAAAAAAGAGTTGGATGCGCTCCTCTCCGATGAAGCATTGGCAGACGTTCCATTCCTGATTCTAGGTAACAAGATTGATATTTCATATGCTGCATCCGAAGACGAGTTACGGTACAACTTGGGGCTAACAAACTTCACGACTGGCAAGGGCAAGGTAACCATGTCTGACTCTAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTGAGAAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG ATGTTTTTGGTCGATTGGTTCTATGGAGTTCTTGCGTCCCTTGGGTTGTGGCAAAAGGAGGCCAAGATCCTTTTCTTAGGGCTTGATAATGCTGGAAAGACGACCTTGCTTCATATGTTGAAAGATGAGAGATTAGTTCAACACCAGCCGACTCAGCATCCGACTTCCGAAGAGTTGAGCATTGGCAAGATAAAGTTCAAGGCCTTTGACCTTGGAGGACATCAGATTGCTCGCCGAGTTTGGAAAGATTACTATGCTAAGGTGGATGCAGTAGTTTATCTGGTTGATGCATATGACAAGGAGAGATTTGCCGAGTCGAAAAAAGAGTTGGATGCGCTCCTCTCCGATGAAGCATTGGCAGACGTTCCATTCCTGATTCTAGGTAACAAGATTGATATTTCATATGCTGCATCCGAAGACGAGTTACGGTACAACTTGGGGCTAACAAACTTCACGACTGGCAAGGGCAAGGTAACCATGTCTGACTCTAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTGAGAAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDEALADVPFLILGNKIDISYAASEDELRYNLGLTNFTTGKGKVTMSDSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK Homology
BLAST of Carg23268 vs. NCBI nr
Match: XP_022938244.1 (GTP-binding protein SAR1A-like [Cucurbita moschata] >KAG7021059.1 GTP-binding protein SAR1A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 392.9 bits (1008), Expect = 1.6e-105 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Carg23268 vs. NCBI nr
Match: XP_022965960.1 (GTP-binding protein SAR1A-like [Cucurbita maxima] >XP_023538625.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 391.0 bits (1003), Expect = 6.1e-105 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Carg23268 vs. NCBI nr
Match: KAG6586226.1 (hypothetical protein SDJN03_18959, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 391.0 bits (1003), Expect = 6.1e-105 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Carg23268 vs. NCBI nr
Match: XP_022946417.1 (GTP-binding protein SAR1A-like isoform X1 [Cucurbita moschata] >XP_022999191.1 GTP-binding protein SAR1A-like [Cucurbita maxima] >XP_023545323.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo] >KAG7030125.1 GTP-binding protein SAR1A [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 386.3 bits (991), Expect = 1.5e-103 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Carg23268 vs. NCBI nr
Match: XP_008453690.1 (PREDICTED: GTP-binding protein SAR1A [Cucumis melo] >KAA0048058.1 GTP-binding protein SAR1A [Cucumis melo var. makuwa] >TYJ96478.1 GTP-binding protein SAR1A [Cucumis melo var. makuwa]) HSP 1 Score: 384.8 bits (987), Expect = 4.4e-103 Identity = 188/193 (97.41%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 2.7e-103 Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 7.7e-103 Identity = 182/192 (94.79%), Postives = 187/192 (97.40%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 3.8e-102 Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 6.1e-100 Identity = 180/194 (92.78%), Postives = 186/194 (95.88%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 1.6e-95 Identity = 167/193 (86.53%), Postives = 182/193 (94.30%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy TrEMBL
Match: A0A6J1FDH8 (GTP-binding protein SAR1A-like OS=Cucurbita moschata OX=3662 GN=LOC111444387 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 7.8e-106 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy TrEMBL
Match: A0A6J1HQ80 (GTP-binding protein SAR1A-like OS=Cucurbita maxima OX=3661 GN=LOC111465682 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 3.0e-105 Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy TrEMBL
Match: A0A6J1KCD9 (GTP-binding protein SAR1A-like OS=Cucurbita maxima OX=3661 GN=LOC111493648 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 7.3e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy TrEMBL
Match: A0A6J1G3P4 (GTP-binding protein SAR1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450482 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 7.3e-104 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Carg23268 vs. ExPASy TrEMBL
Match: A0A5D3BE34 (GTP-binding protein SAR1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001230 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.1e-103 Identity = 188/193 (97.41%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of Carg23268 vs. TAIR 10
Match: AT4G02080.1 (secretion-associated RAS super family 2 ) HSP 1 Score: 375.9 bits (964), Expect = 1.9e-104 Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of Carg23268 vs. TAIR 10
Match: AT1G56330.1 (secretion-associated RAS 1B ) HSP 1 Score: 374.4 bits (960), Expect = 5.5e-104 Identity = 182/192 (94.79%), Postives = 187/192 (97.40%), Query Frame = 0
BLAST of Carg23268 vs. TAIR 10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 370.2 bits (949), Expect = 1.0e-102 Identity = 179/192 (93.23%), Postives = 189/192 (98.44%), Query Frame = 0
BLAST of Carg23268 vs. TAIR 10
Match: AT1G09180.1 (secretion-associated RAS super family 1 ) HSP 1 Score: 350.9 bits (899), Expect = 6.5e-97 Identity = 172/193 (89.12%), Postives = 181/193 (93.78%), Query Frame = 0
BLAST of Carg23268 vs. TAIR 10
Match: AT1G02620.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 198.0 bits (502), Expect = 7.1e-51 Identity = 94/111 (84.68%), Postives = 108/111 (97.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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