Homology
BLAST of Carg23265 vs. NCBI nr
Match:
KAG7021056.1 (RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 730.7 bits (1885), Expect = 6.3e-207
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
Query: 1 LLITKMALVVTIQPPFSIPHKSFAKFPKPFRFHRFRPVTNSMADSSKPVTGENYPVPLSP 60
LLITKMALVVTIQPPFSIPHKSFAKFPKPFRFHRFRPVTNSMADSSKPVTGENYPVPLSP
Sbjct: 1 LLITKMALVVTIQPPFSIPHKSFAKFPKPFRFHRFRPVTNSMADSSKPVTGENYPVPLSP 60
Query: 61 PLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESVLASVPRFL 120
PLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESVLASVPRFL
Sbjct: 61 PLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESVLASVPRFL 120
Query: 121 GDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYI 180
GDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYI
Sbjct: 121 GDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYI 180
Query: 181 AFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQ 240
AFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQ
Sbjct: 181 AFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQ 240
Query: 241 NTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLG 300
NTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLG
Sbjct: 241 NTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLG 300
Query: 301 IPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQ 360
IPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQ
Sbjct: 301 IPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQ 360
Query: 361 EVNSAASLKPMP 373
EVNSAASLKPMP
Sbjct: 361 EVNSAASLKPMP 372
BLAST of Carg23265 vs. NCBI nr
Match:
KAG6586224.1 (RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 706.1 bits (1821), Expect = 1.7e-199
Identity = 361/369 (97.83%), Postives = 364/369 (98.64%), Query Frame = 0
Query: 6 MALVVTIQPPFSIPHKSFAKFPKPFRFHRFRPVTNSMADSSKPVTGENYPVPLSPPLPAI 65
MALVVT+Q PFSIP+KSFAKFPKPFRFHRFRPVTNSMADSSKPVTGENYPVPLSPPLPAI
Sbjct: 1 MALVVTLQAPFSIPNKSFAKFPKPFRFHRFRPVTNSMADSSKPVTGENYPVPLSPPLPAI 60
Query: 66 SKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESVLASVPRFLGDSAM 125
SKNLELARAMAACSKSSLFSLSACDV+YEDEWLIAVNKPQGVYCESVLASVP FLGDSAM
Sbjct: 61 SKNLELARAMAACSKSSLFSLSACDVVYEDEWLIAVNKPQGVYCESVLASVPCFLGDSAM 120
Query: 126 AGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVG 185
AG QSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVG
Sbjct: 121 AGEQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVG 180
Query: 186 SAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEE 245
SAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEE
Sbjct: 181 SAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEE 240
Query: 246 LPESRKD--EEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPI 305
LPESRKD EEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPI
Sbjct: 241 LPESRKDEEEEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPI 300
Query: 306 VGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQEVN 365
VGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQEVN
Sbjct: 301 VGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQEVN 360
Query: 366 SAASLKPMP 373
SAASLKPMP
Sbjct: 361 SAASLKPMP 369
BLAST of Carg23265 vs. NCBI nr
Match:
XP_022938212.1 (RNA pseudouridine synthase 1 [Cucurbita moschata])
HSP 1 Score: 641.7 bits (1654), Expect = 3.8e-180
Identity = 329/331 (99.40%), Postives = 329/331 (99.40%), Query Frame = 0
Query: 42 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 101
MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV
Sbjct: 1 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 60
Query: 102 NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 161
NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK
Sbjct: 61 NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 120
Query: 162 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 221
VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG
Sbjct: 121 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 180
Query: 222 GSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIR 281
GSVVRDMETSFEVLSVNGQNTKEE PESRKD EEEEEETIVAQSKSLIDIDARKDEILIR
Sbjct: 181 GSVVRDMETSFEVLSVNGQNTKEEPPESRKD-EEEEEETIVAQSKSLIDIDARKDEILIR 240
Query: 282 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL 341
ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL
Sbjct: 241 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL 300
Query: 342 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 373
KLQAPLPSWATQALQPQQQEVNSAASLKPMP
Sbjct: 301 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 330
BLAST of Carg23265 vs. NCBI nr
Match:
XP_022965835.1 (RNA pseudouridine synthase 1 [Cucurbita maxima])
HSP 1 Score: 636.3 bits (1640), Expect = 1.6e-178
Identity = 325/331 (98.19%), Postives = 328/331 (99.09%), Query Frame = 0
Query: 42 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 101
MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV
Sbjct: 1 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 60
Query: 102 NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 161
NK QGVYCESVL SVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK
Sbjct: 61 NKTQGVYCESVLGSVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 120
Query: 162 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 221
VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG
Sbjct: 121 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 180
Query: 222 GSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIR 281
GSVVRDMETSFEVLSVNGQ+TKEELPESRKD EEEEEETIVAQSKSLIDIDARKDEILIR
Sbjct: 181 GSVVRDMETSFEVLSVNGQSTKEELPESRKD-EEEEEETIVAQSKSLIDIDARKDEILIR 240
Query: 282 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL 341
ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHP+TGIPL
Sbjct: 241 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPITGIPL 300
Query: 342 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 373
KLQAPLPSWATQALQPQQQE+NSAASLKPMP
Sbjct: 301 KLQAPLPSWATQALQPQQQEMNSAASLKPMP 330
BLAST of Carg23265 vs. NCBI nr
Match:
XP_023536802.1 (RNA pseudouridine synthase 1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 635.2 bits (1637), Expect = 3.6e-178
Identity = 325/331 (98.19%), Postives = 327/331 (98.79%), Query Frame = 0
Query: 42 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 101
MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLI V
Sbjct: 1 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIVV 60
Query: 102 NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 161
NKPQGVYCESVLASVP FLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK
Sbjct: 61 NKPQGVYCESVLASVPLFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 120
Query: 162 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 221
VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG
Sbjct: 121 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 180
Query: 222 GSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIR 281
GSVVRDMETSFEVLSVNGQ+TKEELPESRKD EEEEEETIVAQSKSLID+DARKDEILIR
Sbjct: 181 GSVVRDMETSFEVLSVNGQSTKEELPESRKD-EEEEEETIVAQSKSLIDVDARKDEILIR 240
Query: 282 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL 341
ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVT IPL
Sbjct: 241 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTDIPL 300
Query: 342 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 373
KLQAPLPSWATQALQPQQQEVNSAASLKPMP
Sbjct: 301 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 330
BLAST of Carg23265 vs. ExPASy Swiss-Prot
Match:
Q7XA65 (RNA pseudouridine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g56345 PE=2 SV=1)
HSP 1 Score: 347.8 bits (891), Expect = 1.5e-94
Identity = 179/301 (59.47%), Postives = 220/301 (73.09%), Query Frame = 0
Query: 53 NYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESV 112
NYP P+S P P ISK++EL RAM A SKSSLF+L+ D++YEDE+L+AVNKP+GVYCE+V
Sbjct: 39 NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 98
Query: 113 LASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTD 172
L S P+ + DS+ E HLANRLDRDTSGVM+ITKSHKVA+KLVKAFT+
Sbjct: 99 LRSAPQIVLDSS-------------SEYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTE 158
Query: 173 HKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSF 232
HK+ KSYIA C+GS+P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET+F
Sbjct: 159 HKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTF 218
Query: 233 EVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDE--ILIRARPRSGRTH 292
EV+SVN ++ E E+ IVA+ + + D+ +++RA PRSGRTH
Sbjct: 219 EVVSVNS-------VKNESCELEDVNHVIVAEGERELSCGGDDDDVVVVVRAFPRSGRTH 278
Query: 293 QIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSW 352
QIRLH QYLGIPI GDVKY GV EWNG+ ++ HELHAE L HPVTG + ++APLP W
Sbjct: 279 QIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYW 319
BLAST of Carg23265 vs. ExPASy Swiss-Prot
Match:
Q2QNM3 (RNA pseudouridine synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0560500 PE=2 SV=1)
HSP 1 Score: 341.7 bits (875), Expect = 1.1e-92
Identity = 181/310 (58.39%), Postives = 222/310 (71.61%), Query Frame = 0
Query: 50 TGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYC 109
TGE YPVP+SPP PA SK++EL RAM A ++S+ + S+ V++EDEWL V+KP GVYC
Sbjct: 48 TGE-YPVPVSPPYPAASKDVELRRAMTASARSAAY--SSAPVVFEDEWLAVVDKPAGVYC 107
Query: 110 ESVLASVP---RFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKL 169
+++L+++P LGD A + P LHLANRLDRDTSG+MVITK +KVA KL
Sbjct: 108 DALLSALPCSAATLGDEA-----------TKPNLHLANRLDRDTSGLMVITKCNKVAGKL 167
Query: 170 VKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVR 229
VKAFT+HKV K+Y+A C+G P W+KI + SGHGRSK G WRVYA +DVGRSLPGGSVVR
Sbjct: 168 VKAFTEHKVKKTYLALCIGYPPAWEKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVR 227
Query: 230 DMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKS---LIDIDARKDEILIRAR 289
DM T FEVL +NG+ E + E +E E+I Q K+ D D + IL+RA
Sbjct: 228 DMSTRFEVLGINGKGQFRE----PSNFEVDETESITVQEKAADLTSDGDEKNSIILVRAY 287
Query: 290 PRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKL 349
P+SGRTHQIRLH QYLG PI GDVKY GV EWNG YD H LHAESL FVHPVTG+P+
Sbjct: 288 PQSGRTHQIRLHCQYLGFPIRGDVKYSGVIEWNGVDYDGHALHAESLSFVHPVTGLPVTF 339
Query: 350 QAPLPSWATQ 354
++PLPSWA +
Sbjct: 348 RSPLPSWANE 339
BLAST of Carg23265 vs. ExPASy Swiss-Prot
Match:
Q68XB2 (Ribosomal large subunit pseudouridine synthase C OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=rluC PE=3 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16
Identity = 81/267 (30.34%), Postives = 122/267 (45.69%), Query Frame = 0
Query: 91 VIYEDEWLIAVNKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDT 150
+IYED+ LIA+NKP + + S DSA+ + + L +RLD++T
Sbjct: 91 LIYEDDHLIAINKPASLATQG--GSKINLSIDSALK-----YLNYQGADFKLVHRLDKET 150
Query: 151 SGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVY 210
SG+++I K++ + KL AF + V K Y A G P IVKS G+SK
Sbjct: 151 SGLLLIAKNYLSSVKLHDAFKEKLVIKKYFAITYG-RPVKNVGIVKSNIGKSK------- 210
Query: 211 AAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLID 270
GR F++ ++ N K + T KSL
Sbjct: 211 -----GR-------------MFKITDIDSDNGKLAI-------------TYYKLLKSL-- 270
Query: 271 IDARKDEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKY--EGVTEWNGKIYDSHELHAE 330
+ LI P +GR HQ+RLH+Q LG PI+GD KY + V ++ ++ LHA
Sbjct: 271 ---NNNLFLIEFMPVTGRMHQLRLHAQLLGCPILGDDKYGNKEVMPYSKYMF----LHAN 302
Query: 331 SLYFVHPVTGIPLKLQAPLPSWATQAL 356
++Y + G +KL+A LP + T+ L
Sbjct: 331 NIYLSESIVGKEIKLEAKLPFYFTRRL 302
BLAST of Carg23265 vs. ExPASy Swiss-Prot
Match:
Q8D8G1 (Ribosomal large subunit pseudouridine synthase C OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=rluC PE=3 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 4.0e-15
Identity = 81/305 (26.56%), Postives = 126/305 (41.31%), Query Frame = 0
Query: 60 PPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESVLASVPRF 119
PP+ K+ E A + + L L +IYED+ L+ +NKP G
Sbjct: 69 PPVTLEKKDPETAPSTKLNKVAELQDL----IIYEDDHLLVLNKPSGTAVH--------- 128
Query: 120 LGDSAMAGAQSGEIKISLPE---LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVS 179
G S + ++ PE L L +R+DRDTSG++++ K L F + V
Sbjct: 129 -GGSGLKFGAIEALRALRPEARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQ 188
Query: 180 KSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLS 239
K Y A +G +WK K V + R P G + ET F+V+
Sbjct: 189 KYYFALVMG---EWKNSCKVVNAPLLKNEV------NSIVRVNPNG---KPSETRFKVI- 248
Query: 240 VNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHS 299
E+ P++ L++A P +GRTHQIR+H+
Sbjct: 249 -------EKFPQA----------------------------TLVQASPITGRTHQIRVHT 308
Query: 300 QYLGIPIV-----GDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWA 357
QY G PI GD +++ T +G + LHA ++ F HP T P+++ AP+
Sbjct: 309 QYSGHPIAWDDRYGDRRFDAYTAQHG--LNRLFLHAANIRFTHPATEQPMEINAPMGEQL 309
BLAST of Carg23265 vs. ExPASy Swiss-Prot
Match:
Q9ZDR7 (Ribosomal large subunit pseudouridine synthase C OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=rluC PE=3 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 5.3e-15
Identity = 77/267 (28.84%), Postives = 122/267 (45.69%), Query Frame = 0
Query: 91 VIYEDEWLIAVNKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDT 150
+IYED+ LIA+NKP + + S DSA+ + + L +RLD++T
Sbjct: 91 LIYEDDHLIAINKPASLATQG--GSKINLSIDSALK-----YLNYQGADFKLVHRLDKET 150
Query: 151 SGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVY 210
SG+++I K++ + KL AF + V K Y A G P VKS G+SK
Sbjct: 151 SGLLLIAKNYLSSVKLHNAFKEKLVIKKYFAITYG-RPVKNVGTVKSNIGKSK------- 210
Query: 211 AAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLID 270
R L S + ++++ L++ T KSL
Sbjct: 211 ------RRL---SKIANIDSDDGKLAI----------------------TYYKLLKSL-- 270
Query: 271 IDARKDEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKY--EGVTEWNGKIYDSHELHAE 330
+ LI P +GR HQ+RLH+Q LG PI+GD KY + + ++ ++ LHA
Sbjct: 271 ---NNNLFLIEFMPVTGRMHQLRLHAQLLGCPILGDDKYGNKEIMPYSKYMF----LHAN 302
Query: 331 SLYFVHPVTGIPLKLQAPLPSWATQAL 356
++Y + G +KL+A LP + T+ +
Sbjct: 331 NIYLSETIVGKEIKLEAKLPFYFTRRI 302
BLAST of Carg23265 vs. ExPASy TrEMBL
Match:
A0A6J1FDF4 (RNA pseudouridine synthase 1 OS=Cucurbita moschata OX=3662 GN=LOC111444360 PE=4 SV=1)
HSP 1 Score: 641.7 bits (1654), Expect = 1.9e-180
Identity = 329/331 (99.40%), Postives = 329/331 (99.40%), Query Frame = 0
Query: 42 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 101
MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV
Sbjct: 1 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 60
Query: 102 NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 161
NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK
Sbjct: 61 NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 120
Query: 162 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 221
VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG
Sbjct: 121 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 180
Query: 222 GSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIR 281
GSVVRDMETSFEVLSVNGQNTKEE PESRKD EEEEEETIVAQSKSLIDIDARKDEILIR
Sbjct: 181 GSVVRDMETSFEVLSVNGQNTKEEPPESRKD-EEEEEETIVAQSKSLIDIDARKDEILIR 240
Query: 282 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL 341
ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL
Sbjct: 241 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL 300
Query: 342 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 373
KLQAPLPSWATQALQPQQQEVNSAASLKPMP
Sbjct: 301 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 330
BLAST of Carg23265 vs. ExPASy TrEMBL
Match:
A0A6J1HPV5 (RNA pseudouridine synthase 1 OS=Cucurbita maxima OX=3661 GN=LOC111465599 PE=4 SV=1)
HSP 1 Score: 636.3 bits (1640), Expect = 7.8e-179
Identity = 325/331 (98.19%), Postives = 328/331 (99.09%), Query Frame = 0
Query: 42 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 101
MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV
Sbjct: 1 MADSSKPVTGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAV 60
Query: 102 NKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 161
NK QGVYCESVL SVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK
Sbjct: 61 NKTQGVYCESVLGSVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 120
Query: 162 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 221
VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG
Sbjct: 121 VASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPG 180
Query: 222 GSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIR 281
GSVVRDMETSFEVLSVNGQ+TKEELPESRKD EEEEEETIVAQSKSLIDIDARKDEILIR
Sbjct: 181 GSVVRDMETSFEVLSVNGQSTKEELPESRKD-EEEEEETIVAQSKSLIDIDARKDEILIR 240
Query: 282 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPL 341
ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHP+TGIPL
Sbjct: 241 ARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPITGIPL 300
Query: 342 KLQAPLPSWATQALQPQQQEVNSAASLKPMP 373
KLQAPLPSWATQALQPQQQE+NSAASLKPMP
Sbjct: 301 KLQAPLPSWATQALQPQQQEMNSAASLKPMP 330
BLAST of Carg23265 vs. ExPASy TrEMBL
Match:
A0A0A0LJY6 (PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G033960 PE=4 SV=1)
HSP 1 Score: 574.7 bits (1480), Expect = 2.8e-160
Identity = 302/375 (80.53%), Postives = 324/375 (86.40%), Query Frame = 0
Query: 6 MALVVTIQPPFSIPHKSFAKFP--KPFRFHRFRPVTNSMADSSKPVTG------ENYPVP 65
MAL +++ P FSI K+F +FP K F FHRF+ V+NSM DSS+PVTG ENYPVP
Sbjct: 1 MALFISLHPNFSISPKTFTEFPFTKSFCFHRFKSVSNSMTDSSEPVTGNCPSTAENYPVP 60
Query: 66 LSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESVLASVP 125
LSPPLPAISKNLELARAM A SKSSL++LSA DVIYEDEWLIAVNKPQG+YCE+VLA+VP
Sbjct: 61 LSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVP 120
Query: 126 RFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSK 185
R LGDSA AG IK SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSK
Sbjct: 121 RLLGDSANAG-----IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSK 180
Query: 186 SYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSV 245
SYIAFCVG++PKWKKI VKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMET FEVLSV
Sbjct: 181 SYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETYFEVLSV 240
Query: 246 NGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILIRARPRSGRTHQIRLHSQ 305
NG+NT EEL + R+ EEETIV +KSL+DID+ KDEILIRARPRSGRTHQIRLH Q
Sbjct: 241 NGKNTMEELQKFRRG----EEETIVVHTKSLVDIDSHKDEILIRARPRSGRTHQIRLHCQ 300
Query: 306 YLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWATQALQP 365
YLGIPI GDVKYEGVTEWN KIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWA+QALQP
Sbjct: 301 YLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQP 360
Query: 366 QQQEVNSAASLKPMP 373
QQ EVNS S K MP
Sbjct: 361 QQHEVNSPQSFKTMP 366
BLAST of Carg23265 vs. ExPASy TrEMBL
Match:
A0A6J1DQ12 (RNA pseudouridine synthase 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023261 PE=4 SV=1)
HSP 1 Score: 558.1 bits (1437), Expect = 2.7e-155
Identity = 291/334 (87.13%), Postives = 303/334 (90.72%), Query Frame = 0
Query: 42 MADSSKPV------TGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYED 101
MAD S PV TG+NYP+PLSPPLPAISKNLELARAMAA SKSSLF+LSA DVI+ED
Sbjct: 1 MADPSIPVTGNSPATGQNYPIPLSPPLPAISKNLELARAMAASSKSSLFALSATDVIFED 60
Query: 102 EWLIAVNKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMV 161
EWLIAVNKPQGVYCESVLASVPR LGDSAMAG QSG I+ISLPELHLANRLDRDTSGVMV
Sbjct: 61 EWLIAVNKPQGVYCESVLASVPRLLGDSAMAGEQSGGIQISLPELHLANRLDRDTSGVMV 120
Query: 162 ITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADV 221
ITKSHKVASKLVKAFTDH VSKSYIAFCVGSAPKWKKI VKSGHGRSKFGVWRVYAAADV
Sbjct: 121 ITKSHKVASKLVKAFTDHNVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADV 180
Query: 222 GRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARK 281
GRSLPGGSVVRDMET FEVLSVNGQ+T +ELPE RKD EEETIV QSKSLIDIDA K
Sbjct: 181 GRSLPGGSVVRDMETYFEVLSVNGQSTMDELPEVRKD----EEETIVVQSKSLIDIDAHK 240
Query: 282 DEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHP 341
DEILIRARPRSGRTHQIRLH QYLGIPI GDVKYEGV EWNG IYDSHELHAESL+FVHP
Sbjct: 241 DEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVIEWNGNIYDSHELHAESLFFVHP 300
Query: 342 VTGIPLKLQAPLPSWATQALQPQQQEVNSAASLK 370
VTGIPLKLQAPLPSWA+QAL QQQEV+S ++LK
Sbjct: 301 VTGIPLKLQAPLPSWASQALLSQQQEVSSPSTLK 330
BLAST of Carg23265 vs. ExPASy TrEMBL
Match:
A0A6J1DT56 (RNA pseudouridine synthase 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023261 PE=4 SV=1)
HSP 1 Score: 550.8 bits (1418), Expect = 4.3e-153
Identity = 291/344 (84.59%), Postives = 303/344 (88.08%), Query Frame = 0
Query: 42 MADSSKPV------TGENYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYED 101
MAD S PV TG+NYP+PLSPPLPAISKNLELARAMAA SKSSLF+LSA DVI+ED
Sbjct: 1 MADPSIPVTGNSPATGQNYPIPLSPPLPAISKNLELARAMAASSKSSLFALSATDVIFED 60
Query: 102 EWLIAVNKPQGVYCESVLASVPRFLGDSAMAGAQSG----------EIKISLPELHLANR 161
EWLIAVNKPQGVYCESVLASVPR LGDSAMAG QSG I+ISLPELHLANR
Sbjct: 61 EWLIAVNKPQGVYCESVLASVPRLLGDSAMAGEQSGGTTTLCLCLARIQISLPELHLANR 120
Query: 162 LDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFG 221
LDRDTSGVMVITKSHKVASKLVKAFTDH VSKSYIAFCVGSAPKWKKI VKSGHGRSKFG
Sbjct: 121 LDRDTSGVMVITKSHKVASKLVKAFTDHNVSKSYIAFCVGSAPKWKKINVKSGHGRSKFG 180
Query: 222 VWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQS 281
VWRVYAAADVGRSLPGGSVVRDMET FEVLSVNGQ+T +ELPE RKD EEETIV QS
Sbjct: 181 VWRVYAAADVGRSLPGGSVVRDMETYFEVLSVNGQSTMDELPEVRKD----EEETIVVQS 240
Query: 282 KSLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHEL 341
KSLIDIDA KDEILIRARPRSGRTHQIRLH QYLGIPI GDVKYEGV EWNG IYDSHEL
Sbjct: 241 KSLIDIDAHKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVIEWNGNIYDSHEL 300
Query: 342 HAESLYFVHPVTGIPLKLQAPLPSWATQALQPQQQEVNSAASLK 370
HAESL+FVHPVTGIPLKLQAPLPSWA+QAL QQQEV+S ++LK
Sbjct: 301 HAESLFFVHPVTGIPLKLQAPLPSWASQALLSQQQEVSSPSTLK 340
BLAST of Carg23265 vs. TAIR 10
Match:
AT1G56345.1 (Pseudouridine synthase family protein )
HSP 1 Score: 347.8 bits (891), Expect = 1.1e-95
Identity = 179/301 (59.47%), Postives = 220/301 (73.09%), Query Frame = 0
Query: 53 NYPVPLSPPLPAISKNLELARAMAACSKSSLFSLSACDVIYEDEWLIAVNKPQGVYCESV 112
NYP P+S P P ISK++EL RAM A SKSSLF+L+ D++YEDE+L+AVNKP+GVYCE+V
Sbjct: 39 NYPKPISAPPPPISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAV 98
Query: 113 LASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTD 172
L S P+ + DS+ E HLANRLDRDTSGVM+ITKSHKVA+KLVKAFT+
Sbjct: 99 LRSAPQIVLDSS-------------SEYHLANRLDRDTSGVMIITKSHKVAAKLVKAFTE 158
Query: 173 HKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLPGGSVVRDMETSF 232
HK+ KSYIA C+GS+P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET+F
Sbjct: 159 HKIRKSYIALCIGSSPNWRRVTVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTF 218
Query: 233 EVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDE--ILIRARPRSGRTH 292
EV+SVN ++ E E+ IVA+ + + D+ +++RA PRSGRTH
Sbjct: 219 EVVSVNS-------VKNESCELEDVNHVIVAEGERELSCGGDDDDVVVVVRAFPRSGRTH 278
Query: 293 QIRLHSQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAESLYFVHPVTGIPLKLQAPLPSW 352
QIRLH QYLGIPI GDVKY GV EWNG+ ++ HELHAE L HPVTG + ++APLP W
Sbjct: 279 QIRLHCQYLGIPIRGDVKYHGVYEWNGRTFEGHELHAECLSLDHPVTGDSIVIRAPLPYW 319
BLAST of Carg23265 vs. TAIR 10
Match:
AT1G76050.2 (Pseudouridine synthase family protein )
HSP 1 Score: 68.9 bits (167), Expect = 9.5e-12
Identity = 81/328 (24.70%), Postives = 121/328 (36.89%), Query Frame = 0
Query: 78 CSKSSLFSLSA------CDVIYEDEWLIAVNK------------PQGVYCESVL--ASVP 137
C+ S L L A D++YED+ ++ VNK P G +L S+P
Sbjct: 131 CTISELQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLP 190
Query: 138 ----------------RFLGDSAMAGAQSGEIKISLPELHLANRLDRDTSGVMVITKSHK 197
F D M + S P + +RLD+ T+G++V+ K
Sbjct: 191 CVDYSNSEEDDDSDEETFSDDEEMTTSPSSYAASVRP--GIVHRLDKGTTGLLVVAKDEH 250
Query: 198 VASKLVKAFTDHKVSKSYIAFCVG-SAPKWKKIIVKSGHGRSKFGVWRVYAAADVGRSLP 257
+ L + F H + + Y++ G +P +I + G S R+ AA +P
Sbjct: 251 SHAHLAEQFKLHTIERVYVSLTTGVPSPPQGRIEIPIGRDSSN----RIRMAA-----IP 310
Query: 258 GGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLIDIDARKDEILI 317
GG V G + A +I+ A L+
Sbjct: 311 GG--------------VRGGRARH-----------------AASRYKVIETFAGGGSALV 370
Query: 318 RARPRSGRTHQIRLHSQYLGIPIVGDVKYEGVTEWNGKIY-------DSHE--------- 350
R +GRTHQIR H++Y+G+P++GD Y G + D E
Sbjct: 371 EWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIIELISRMD 416
BLAST of Carg23265 vs. TAIR 10
Match:
AT3G52260.2 (Pseudouridine synthase family protein )
HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06
Identity = 63/231 (27.27%), Postives = 100/231 (43.29%), Query Frame = 0
Query: 90 DVIYEDEWLIAVNKPQGVYC--------ESVLASVPRFLG--DSAMAGAQSGEIKISLPE 149
+V+YED+ LIA+NKP G+ +VL + G DS + +S P
Sbjct: 98 EVLYEDDDLIALNKPSGLQVLPGGLFQQRTVLTQLQWCFGKNDSYIGSRES-------PH 157
Query: 150 LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGH 209
+RL R TSG+++ K+ +KL F + G++ +V SG+
Sbjct: 158 PVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAE------------GTS------LVGSGN 217
Query: 210 GRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEE 269
+ G R + + R+L G V D + + V P + E
Sbjct: 218 LDQECGTGR--KLSKIYRALADGIVEEDEVVIKQPIGV------VRYPGVAQGLYVASPE 277
Query: 270 TIVAQSK-SLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKY 310
A SK +++ D K+ L++ +SGR HQIR+H Y+G P+VGD Y
Sbjct: 278 GKPAFSKVFVLERDREKNCSLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLY 295
BLAST of Carg23265 vs. TAIR 10
Match:
AT3G52260.3 (Pseudouridine synthase family protein )
HSP 1 Score: 47.0 bits (110), Expect = 3.9e-05
Identity = 61/233 (26.18%), Postives = 99/233 (42.49%), Query Frame = 0
Query: 90 DVIYEDEWLIAVNKPQGVYC--------ESVLASVPRFLG--DSAMAGAQSGEIKISLPE 149
+V+YED+ LIA+NKP G+ +VL + G DS + +S P
Sbjct: 128 EVLYEDDDLIALNKPSGLQVLPGGLFQQRTVLTQLQWCFGKNDSYIGSRES-------PH 187
Query: 150 LHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGH 209
+RL R TSG+++ K+ +KL F + G++ +V SG+
Sbjct: 188 PVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAE------------GTS------LVGSGN 247
Query: 210 GRSKFGVWRVYAAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEE 269
+ G R + + R+L G V D + + V P + E
Sbjct: 248 LDQECGTGR--KLSKIYRALADGIVEEDEVVIKQPIGV------VRYPGVAQGLYVASPE 307
Query: 270 TIVAQSK-SLIDIDARKDEILIRARPRSGRTHQIRLHSQYLGIPIVGDVKYEG 312
A SK +++ D K+ L++ +SGR HQIR+H Y+G P+V + G
Sbjct: 308 GKPAFSKVFVLERDREKNCSLVKVEIQSGRPHQIRIHLAYMGHPLVEMTMFTG 327
BLAST of Carg23265 vs. TAIR 10
Match:
AT1G78910.1 (Pseudouridine synthase family protein )
HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05
Identity = 64/257 (24.90%), Postives = 105/257 (40.86%), Query Frame = 0
Query: 91 VIYEDEWLIAVNKPQGVYCESVLASVPRFLGDSAMAGAQSGEIKISLPELHLANRLDRDT 150
V ++D +I +NKP + V +VP A+A A P L +RLDR+T
Sbjct: 181 VRFKDSAIIVLNKPPKL---PVKGNVPIHNSMDALAAAALSFGNDEGP--RLVHRLDRET 240
Query: 151 SGVMVITKSHKVASKLVKAFTDHKVSKSYIAFCVGSAPKWKKIIVKSGHGRSKFGVWRVY 210
SG++V+ ++ + L F+D+K S S W K +++ Y
Sbjct: 241 SGLLVMGRTKESIDYLHSVFSDYKGRNS-------SCKAWNKACE---------AMYQQY 300
Query: 211 AAADVGRSLPGGSVVRDMETSFEVLSVNGQNTKEELPESRKDEEEEEEETIVAQSKSLID 270
A +G ++ +VL +G+ + L + E ++ T I+
Sbjct: 301 WALVIGSPKEKEGLI--SAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKIN 360
Query: 271 IDARKDEILIRARPRSGRTHQIRLH-SQYLGIPIVGDVKYEGVTEWNGKIYDSHELHAES 330
+ + RP + R HQ+R+H ++ LG PIVGD KY K +
Sbjct: 361 GCS-----WVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVD----- 401
Query: 331 LYFVHPVTGIPLKLQAP 347
+ P TG P KL+ P
Sbjct: 421 ---IEPTTGKPYKLRRP 401
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7021056.1 | 6.3e-207 | 100.00 | RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. argyrosperm... | [more] |
KAG6586224.1 | 1.7e-199 | 97.83 | RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022938212.1 | 3.8e-180 | 99.40 | RNA pseudouridine synthase 1 [Cucurbita moschata] | [more] |
XP_022965835.1 | 1.6e-178 | 98.19 | RNA pseudouridine synthase 1 [Cucurbita maxima] | [more] |
XP_023536802.1 | 3.6e-178 | 98.19 | RNA pseudouridine synthase 1 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q7XA65 | 1.5e-94 | 59.47 | RNA pseudouridine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g56345 PE=2 S... | [more] |
Q2QNM3 | 1.1e-92 | 58.39 | RNA pseudouridine synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g05... | [more] |
Q68XB2 | 1.6e-16 | 30.34 | Ribosomal large subunit pseudouridine synthase C OS=Rickettsia typhi (strain ATC... | [more] |
Q8D8G1 | 4.0e-15 | 26.56 | Ribosomal large subunit pseudouridine synthase C OS=Vibrio vulnificus (strain CM... | [more] |
Q9ZDR7 | 5.3e-15 | 28.84 | Ribosomal large subunit pseudouridine synthase C OS=Rickettsia prowazekii (strai... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FDF4 | 1.9e-180 | 99.40 | RNA pseudouridine synthase 1 OS=Cucurbita moschata OX=3662 GN=LOC111444360 PE=4 ... | [more] |
A0A6J1HPV5 | 7.8e-179 | 98.19 | RNA pseudouridine synthase 1 OS=Cucurbita maxima OX=3661 GN=LOC111465599 PE=4 SV... | [more] |
A0A0A0LJY6 | 2.8e-160 | 80.53 | PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G03... | [more] |
A0A6J1DQ12 | 2.7e-155 | 87.13 | RNA pseudouridine synthase 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111... | [more] |
A0A6J1DT56 | 4.3e-153 | 84.59 | RNA pseudouridine synthase 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111... | [more] |