Carg23193 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCAATTCAACTCCTTCTTGAATTTTCCGTTTCGGAATTGCTACTTGGGCGCATCAATGGTGGCATAGATTTTAGAGTGGTGCGCACTTCTGGTTCGATTTCGATCTCTGGTGATTTAGAATTTAGTGTTTCTCGAACATGGCTGCTCCGTTTTTCTCAACGCCATTTCAGCCTTACGTTTACCAGGTGATCTCTCATTCTAGATTCTTATTTTGCCGTTTGTAATTTTTAAGTTGATTCTGGATCCTGCTTGGTTTGGGGGAATTTCAGGAAGTTAATGGAAACGTTGATTATATGTAGCGTGTTTGATCGTTCGGCATTTTTCTTTTGTGAATAAGGGTTAAACTTCCTTTCGAATCTCATCGATTCTGAATATTGGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGGTCCATTCTTAGTTGTAAACGAAGGGTTTATTGATTCGTGGAGGATATTTTGTGATTCAATTAGGCAGGCGCGGACTGTTTTTGAGTTATGTTCTTACCAGCCTTGTTCCCACAGCCCAAATATTAGATGCATTGATTGATGCACCAGACTTTGTCTGGAATGTGCAAATTGTTGATACTTTTCCACTTCTAGATTATACACTGGTCATTAGTGTGTTGGTCTTCTAAAATTTTTTTAAAAAAACACACATAGACACACACACACGAATTCTGAAGATGAGTTAACCAGTACGGTTATATAATATTCAGTTACTTCAAATGTAGTTCAAGGTATATAACTCTATGACAGAGTGGGATGGGCCTTTTTAACTCTATGACAGAGGTGAGCCATTTAAGCATTTACGAAACAACATCAAATTCTTTGTACAACCAATGAGGTATAAACCAACAATCTCTCCTAAGTTATTGGTTCATTGTGTTGGATCACCATTTACCTAATCTCTACAAGTCTATTGAGTGTATAGACTGTTTGAGTAAGTTGTTATAACCTAGGCTGTAATACCAACCATTGGCCAAATGGGTCGTCCCCCTCCAAAAGCTAGTTTTAAGAGGCAAGTCAAACATCCAACTCTTTCATGATCGACGTTGGCCTAATCCAAAAATAATGGATGTCAATTTAAGAAGGCATAAAACGAAAAGAAAAATTTTAGACACTGCCCCATGACCGTTCTTACACTAAGAATACATGTTTGTGATATGTCAACAGGCCTGAAAGGAGGTGATATGGGTTGATGACAGGCCAGTAACCACTCTGAGACAACTTAGCATTAAAATAGCCAAAAAGGGAAGCACACATTAGATGCCATCCTATTTAAAGCAAAAAAAATATGAATGGCTTTGAATAAAATCTCTCCCTCTTAATGTAGATTTGGAAGATTTGGAAGGATTTACTCTCATGAAGCTTTATTGTATTGAAATCTAGTGTATGATGTTTGTTACTTTTGTTTTAGTAACAGTAATTTTTTTCCTTCATGTTGTAGAGCCCACAAGATGCAATGATACCTTTTCAGATTTTGGGTGGTGAAGCCCAGGTCGTACAGGTATATAATACATTATTATTGTTATTGCGTGTCACATAGTGGCATCATGGTTAACTTTTTTCATATTTATTGTCTCTCTTCAAGTACTGTAACTCTCTTTATTTTCTTGTTCATCCTGCACTGGCAGATAATGCTGAAGCCACAAGAGAAGGTTATTGCAAGGCCTGGTAAGTAGTGTTAGAATGATTTTTTTTTTTTCTTGGATACACTCGTTTTGATTTCTGTCTCCTTATTGAGAAACATTATTGAGCTTTGAGAATATAGTTTCTATTTCTTATAACACTTTCTTTAGGTCAAGTTCATGTTTAACCTTTTTGGGATATCGACCACAAATTGCCTTAGACACTTGTTTGATATGCTTTTAATTTGTACGCAATGTTCTCACTATCTTGACACACTTGTATAAAAGGATTGTTTTGTAAACATAGATCCTTCTAATTTGTGAATGTTCAAGTTCTCTTTCCATAGTGTTGGTAAATAGACATCGACATTAGATATACAGAGTGTTTCCAATATGATGATTTGTTGATGCTCTTTATCTGCTGTTTCAGCTGAAATTTACTAATGTTCATATGAAACTTGCAATGATAGTCTTGACAAATTTTCTTATTTCAAAAGGTTTTGTTTATGAGAACTGAGGTTTCCTTATAGTTCATCTACTTTTTCTTATGGGGAAAGGTTCTCTTGTTTCTTTGTTGCTTGCTAATTGTATGTGCAACTGATACACTTATTCTTGCAGGCTCCATGTGCTTCATGTCTGGGAATATAGAGATGGAAAATGTTTTTCTCCCCGAAAACGAAGTGGGTGTTTGGCATTGGCTATTTGGCAAGAGTGTTACTAGCATCGTTCTTCGGAATTCCGGTACAAGTGACGGATATGTTGGGATTGCTGCACCTTCTCTTGCTAGGATCCTTCCGGTTTGTGCTGCGTTTTGTTTTCCTTTTTTTAACAAAAAATAAATAATTAAAATTAAAAAATAATAAAAAAGCTTTCATCAATCGAATTTAGCTTCAATGTAGAACATTCCAATTTATCCTCAATGTCATATATGTTTCTACAATTATGTTGCAGATTGATATGGCGATGTTTGGTGGAGAGCTTCTATGCCAGGTAGAGAATATTGTTTATTTGTTATTTGCTTAATAGCTTCTCTCTGTTACTTTTCTTAATCGCTGATGGAAATAAATTAAATTTATATGTTTAAGACATTGGAATTTTAGTTACTTTAATTCAATTATTCAATCTTATTCTTCTGAGCTCCATTGCCTGATAATCTTCGCTTCATTTTTTATACGTAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAAGTTAACAACACAATTGATCACAGAGTACGCAATGTTCTCACAGGTGTGGAGGTATGCTGATTTATTGTTCCTTATTGGCTATACTGCTCCATGTATCTCTGCTTTCTGGTATTCATTTTTGTGCTTCCTAATGTTATTTATTTTTCCTTTCTCTCGCTACTCTTGATGTTATTGTAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGACTTGCCTTTATTCTTGGGGGTGGATCAGGTATGCACTTCTCACTTTTCATTTTATTTAAGCAAATTCTCCAAAGCACTGTTTGCATTTGTTATGCAATCGTGAAAACGGAACACATGCCTGAAGTTTCTGCTTTGAGTTTTCATGTGACCTCAACCTGTTGGCTAGAGCAACCGAAGTGTTCAATTTGTTATTATGATTTCTTTCCACACTTGCAATGTGGTGAAATCACAACTGCTGACCTTGAACAATACCAAGTCAGATGCTAATATGTTATATTGGAATTATATTTTAATCACACTTGATGTAGATGGAATACTACTTTACGTGCTGGTGTTTGTTTTTCCTTCCGGGATTTTTGGTTCATAATTTACTAGGTATGATATATATATAATGGCTTGAAGAGGGAGGGAGATCACATTATTTATATCTAAATGTTTATTTTAATCTTCAAGATGAAACGCACGTCATGCTTCAGCCTTTAGACAATTCAAAATTAGTATTTTTATTTGAAGAAAAAGCCTTCTGCTTTTAAAATAAATAATGTTAATATATGTCTACTGATTATGAAAGTTTTTCGGGTTATGCTAGTTGTACAGAAAAATCTCGAGGTTGGTGAAGTACTAGCAGTGGATATCTCCTGCATTGTGGCTATGACCACCACCATTGATGTCCAAATTAAATACAATGGTCCTGTGAGAAGAGCAGTATTTGGAGTAAGAGTTCCTTACTTTTATGGAGTTTGCTTTCACTTTCCATGTCTTCTCTTCGTTCACCATGCCGTAATTTGATTTCTGGATTATTATCTACACAAAAGCCGAACCGATATGGGATACACTTTGCTTAAATACGTAACACACACCAAGCTTTTATGTTTGATGATGATGGAAGGGCTATATTCTTCAAAATTATAGTCTCGGGGCTATTTGGGTATGTATTTATATAGTCTTTGTGGGCTTCTCTCGGGTGGATATCTCATTTGGCCTTCGTCCTCTTAGTTATTTGCAGAGAAATCATAAAAATACCAGCGCCTTCTGGTTCAGAAGAAGGAAACTTAATCCAACCATTTCGAACACTTCTCGTTCTTCAAGCTTTAACCGAAAACATGTGTCATCTTCTAAGAGGCCTTCTCACCATTGTTAAAATTGCAGGGTGACAACTTAGTGACTGCCACATTAACAGGACCAGGCATGGTGTTCATACAGAGTTTGCCATTTCAACGACTTTCGCAGCGTATTGCGAGGTAATTACTGTCAAATTTCTGTGAAGCTATGTATGGAAGATGATCGGTTTGTTCTCCTTTTGCCTTGAAACTTACTGGAGAAAGTATGTTATGAATTTTGCAGGGCCGTAACATCCCCAAACATGAGGGAAAATCCAAAGTTTTTCGTTCAGCTTGCACTTTTCTTTTTTCTGGCGTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTATGATTTTAGATCTTTAAATCTCCCCGGGGTGTTTAGGTAGAGGCTGAAATTGGGATAAGTAATACAAAGCTTTAGGGGTCTGAGTTGGATAACTTTTTCTTTCCTGTTAATTATTGGATTTTATTTTATATATTGGAGAAGTTGTGCAGATATTTTGTGCTGAGTAAATGATACATCTCCCCAGCTTGATTTTGGGATTTGCATTGAATTTTATGTACTTGTTATCATGTGATGGATGTAAGAAGTATTTTATAAA ATTTCAATTCAACTCCTTCTTGAATTTTCCGTTTCGGAATTGCTACTTGGGCGCATCAATGGTGGCATAGATTTTAGAGTGGTGCGCACTTCTGGTTCGATTTCGATCTCTGGTGATTTAGAATTTAGTGTTTCTCGAACATGGCTGCTCCGTTTTTCTCAACGCCATTTCAGCCTTACGTTTACCAGAGCCCACAAGATGCAATGATACCTTTTCAGATTTTGGGTGGTGAAGCCCAGGTCGTACAGATAATGCTGAAGCCACAAGAGAAGGTTATTGCAAGGCCTGGCTCCATGTGCTTCATGTCTGGGAATATAGAGATGGAAAATGTTTTTCTCCCCGAAAACGAAGTGGGTGTTTGGCATTGGCTATTTGGCAAGAGTGTTACTAGCATCGTTCTTCGGAATTCCGGTACAAGTGACGGATATGTTGGGATTGCTGCACCTTCTCTTGCTAGGATCCTTCCGATTGATATGGCGATGTTTGGTGGAGAGCTTCTATGCCAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAAGTTAACAACACAATTGATCACAGAGTACGCAATGTTCTCACAGGTGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGACTTGCCTTTATTCTTGGGGGTGGATCAGTTGTACAGAAAAATCTCGAGGTTGGTGAAGTACTAGCAGTGGATATCTCCTGCATTGTGGCTATGACCACCACCATTGATGTCCAAATTAAATACAATGGTCCTGTGAGAAGAGCAGTATTTGGAGGTGACAACTTAGTGACTGCCACATTAACAGGACCAGGCATGGTGTTCATACAGAGTTTGCCATTTCAACGACTTTCGCAGCGTATTGCGAGGGCCGTAACATCCCCAAACATGAGGGAAAATCCAAAGTTTTTCGTTCAGCTTGCACTTTTCTTTTTTCTGGCGTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTATGATTTTAGATCTTTAAATCTCCCCGGGGTGTTTAGGTAGAGGCTGAAATTGGGATAAGTAATACAAAGCTTTAGGGGTCTGAGTTGGATAACTTTTTCTTTCCTGTTAATTATTGGATTTTATTTTATATATTGGAGAAGTTGTGCAGATATTTTGTGCTGAGTAAATGATACATCTCCCCAGCTTGATTTTGGGATTTGCATTGAATTTTATGTACTTGTTATCATGTGATGGATGTAAGAAGTATTTTATAAA ATGGCTGCTCCGTTTTTCTCAACGCCATTTCAGCCTTACGTTTACCAGAGCCCACAAGATGCAATGATACCTTTTCAGATTTTGGGTGGTGAAGCCCAGGTCGTACAGATAATGCTGAAGCCACAAGAGAAGGTTATTGCAAGGCCTGGCTCCATGTGCTTCATGTCTGGGAATATAGAGATGGAAAATGTTTTTCTCCCCGAAAACGAAGTGGGTGTTTGGCATTGGCTATTTGGCAAGAGTGTTACTAGCATCGTTCTTCGGAATTCCGGTACAAGTGACGGATATGTTGGGATTGCTGCACCTTCTCTTGCTAGGATCCTTCCGATTGATATGGCGATGTTTGGTGGAGAGCTTCTATGCCAGCCAGATGCATTCCTTTGCTCTGTTAATGATGTGAAAGTTAACAACACAATTGATCACAGAGTACGCAATGTTCTCACAGGTGTGGAGGGGTTTCTTAGACAGAAGTTATCAGGCCAAGGACTTGCCTTTATTCTTGGGGGTGGATCAGTTGTACAGAAAAATCTCGAGGTTGGTGAAGTACTAGCAGTGGATATCTCCTGCATTGTGGCTATGACCACCACCATTGATGTCCAAATTAAATACAATGGTCCTGTGAGAAGAGCAGTATTTGGAGGTGACAACTTAGTGACTGCCACATTAACAGGACCAGGCATGGTGTTCATACAGAGTTTGCCATTTCAACGACTTTCGCAGCGTATTGCGAGGGCCGTAACATCCCCAAACATGAGGGAAAATCCAAAGTTTTTCGTTCAGCTTGCACTTTTCTTTTTTCTGGCGTATGTTGTGATTGTATCTTCAATAATCTTGACAGATGTATGA MAAPFFSTPFQPYVYQSPQDAMIPFQILGGEAQVVQIMLKPQEKVIARPGSMCFMSGNIEMENVFLPENEVGVWHWLFGKSVTSIVLRNSGTSDGYVGIAAPSLARILPIDMAMFGGELLCQPDAFLCSVNDVKVNNTIDHRVRNVLTGVEGFLRQKLSGQGLAFILGGGSVVQKNLEVGEVLAVDISCIVAMTTTIDVQIKYNGPVRRAVFGGDNLVTATLTGPGMVFIQSLPFQRLSQRIARAVTSPNMRENPKFFVQLALFFFLAYVVIVSSIILTDV Homology
BLAST of Carg23193 vs. NCBI nr
Match: KAG7016879.1 (hypothetical protein SDJN02_21990 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-153 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Carg23193 vs. NCBI nr
Match: XP_022922283.1 (uncharacterized protein LOC111430310 isoform X1 [Cucurbita moschata] >KAG6579401.1 hypothetical protein SDJN03_23849, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 551.6 bits (1420), Expect = 3.9e-153 Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Carg23193 vs. NCBI nr
Match: XP_023551646.1 (uncharacterized protein LOC111809421 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 548.5 bits (1412), Expect = 3.3e-152 Identity = 278/281 (98.93%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Carg23193 vs. NCBI nr
Match: XP_022973008.1 (uncharacterized protein LOC111471527 isoform X1 [Cucurbita maxima]) HSP 1 Score: 547.0 bits (1408), Expect = 9.7e-152 Identity = 277/281 (98.58%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of Carg23193 vs. NCBI nr
Match: XP_022154818.1 (uncharacterized protein LOC111021980 [Momordica charantia]) HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149 Identity = 272/281 (96.80%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of Carg23193 vs. ExPASy TrEMBL
Match: A0A6J1E653 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430310 PE=3 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 1.9e-153 Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of Carg23193 vs. ExPASy TrEMBL
Match: A0A6J1IBS7 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471527 PE=3 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 4.7e-152 Identity = 277/281 (98.58%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of Carg23193 vs. ExPASy TrEMBL
Match: A0A6J1DLC0 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111021980 PE=3 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 7.5e-150 Identity = 272/281 (96.80%), Postives = 280/281 (99.64%), Query Frame = 0
BLAST of Carg23193 vs. ExPASy TrEMBL
Match: A0A1S3AT84 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482594 PE=3 SV=1) HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149 Identity = 272/281 (96.80%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Carg23193 vs. ExPASy TrEMBL
Match: A0A0A0KKX3 (Altered inheritance of mitochondria protein 24, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G165180 PE=3 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 4.9e-149 Identity = 271/281 (96.44%), Postives = 279/281 (99.29%), Query Frame = 0
BLAST of Carg23193 vs. TAIR 10
Match: AT4G17420.1 (Tryptophan RNA-binding attenuator protein-like ) HSP 1 Score: 436.0 bits (1120), Expect = 2.2e-122 Identity = 219/285 (76.84%), Postives = 253/285 (88.77%), Query Frame = 0
BLAST of Carg23193 vs. TAIR 10
Match: AT5G47420.1 (Tryptophan RNA-binding attenuator protein-like ) HSP 1 Score: 430.6 bits (1106), Expect = 9.4e-121 Identity = 212/282 (75.18%), Postives = 249/282 (88.30%), Query Frame = 0
BLAST of Carg23193 vs. TAIR 10
Match: AT4G17420.3 (Tryptophan RNA-binding attenuator protein-like ) HSP 1 Score: 386.3 bits (991), Expect = 2.0e-107 Identity = 192/259 (74.13%), Postives = 222/259 (85.71%), Query Frame = 0
BLAST of Carg23193 vs. TAIR 10
Match: AT4G17420.2 (Tryptophan RNA-binding attenuator protein-like ) HSP 1 Score: 363.2 bits (931), Expect = 1.8e-100 Identity = 182/247 (73.68%), Postives = 210/247 (85.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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