Carg23174 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23174
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SKP1-like protein 21 isoform X1
Location	Carg_Chr15: 7800932 .. 7807467 (-)
RNA-Seq Expression	Carg23174
Synteny	Carg23174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACCCTATCTCCAGCTCCTCCTTCTTCTTCCAATCTTTCATGTTCTGTGCAACATTTCCATTTTGCAAGGTATCAATTTATGTTCTTCATCTTTCTGAGTTCCATTTCCCTATGTTTTCATCTCTATTGTGTTTTTCCGTTTTTTAATTTGTCTTTTTGGCTCCTATTGGTTGGGATTTTGATTCATTTCGTTACCTTCAAGAGGGGGTTTTTGAACATGAGCTTGATTTTTGGGAACGAATTGCATTGGTTGTTTTTTTTTTCTCCATGGAAATGGACTTCGTTATTGTTATTATTATTTTTAATTTTCCGTGATAAGATACGATTCGTGATTCTAATTAATTAGATTTGTTTTGTTTTTTTGAAAAAAAGAGGAAATGGGTGTTGAATTTTCGGTTTTTGATGGTTTTAGTTTGTTCGTTTGTTGGCATATAGCTGCAGTAGTTAAATTTTACCGTTCTCTTAATTGAAATCTGGGCAGCGGAAAATTTGAGATTTCCTCGACTTTTGTTCTATGTACCATGCTCTATGGATTATGTAGCAATATTGAGAATTTGTGGAACGTTTCTTTGTGTTGTGGCTGAAGTGTGGTTAGAAATGGAGTCCACTCGCTACTGTTGAAGTTGATTCAAATATCTATTCAGGCAGTGCACGAAATTTTTTGAAATTGAACAGTATTTTCTTCTTTAGCTTTGAAATTTGATTTTGAGAGTTAAGTTTTGTTAGTTCTTTAGAGATTAGCTTCTTGTGGCTAGGATTTTAGATTTTGGGTGAATCATTTGATATAATTATAGAATAATGCAATTAATGAGAGTAAAGTTGAAGGATGTGGTTGAGCTTGCGTTTGTAGGTGACTGTTGACCACAGTGATTGAGTGCTTCTTGGAAGGTCTATCCTTGTAATTCCAACCAACTGAAATAATTTTATCTTTCAATCCAAAGAAAAAAAATCAGAGGTTTTGGTCACATCTCTAATCGCAAATGGATTACCTCGAGTTTTAAGCAGAATAAGTATCGAATTCATACTTGTAACGTTGTTTAAAGGAGAAAGCTCAATATTTTTCCATCACCAAATTGGATTATTCTCTGTAAGGATCAAAGCAATAAATATCTTTGTGTGTTCTCTACGAACTTCTGTCCATCTTTAATAGTTTTAATATGCTCAACTGCCAGCAGGCAGCACCCCTTCTGTGCACTAAAGACTTTCAGGTTCAACTCATTTTCAGTAGTTTTTTTTTGGCAAGGTGAACGTCAGGGTTAGTATCAAGGTGGCTACTTTTTACTTCCGTTGACTATTGTAGGATTTCTATTAAGGAAAGATGAGTAGAGGATCTTGCATTTTTCTTCGATTCTAGATGGAATTTTTTTCTTTGGCACTCTAATGGGTTTTGAAAGGAACAATTGTGTTATCATTCTCTCCTAATCTCTTGAATATGCATGATCATTTCATATTTTAAATTAAGAATAGTGAGTGAGAGGACAGAGAAATGACTGGGCCATCTTTAAAGTGGCATGTAAAGAATGGCTGTTGGCTAGCAGAAATTAACTTTAGAGTTCTGATTTACAGCTGAATTAACTGTTAGAATTTTCATTTTCCCACTGTACCATTAGTCAGGTTTCCGTGTTCAAGATGAAAGTTATTGATGAACCAGAGTGTATTTTATTTATCTATTTATGATTAAAACATCAACTTTGATTAAGAAAAAATGAAAGAGTTCAAGGGCATATAATACCGAGCGTACAAAAGGGAACCCAGTTAAAGAAAAGGGCTTCGATCTTGCAAGATAGTGCCTGTAGAACAAATATAAAAAATCTTTGAAATCGAAGTTGAAAGAGAAACATGAACTCTAGTAAGGGACCAAACATCGCTAGGATCCCTCTCCAAACCTCTAAACACCATGATTCCTTTCACTGCAAAGATTCCACATGATAACACACCCCAACTAAGCACAGTAACTGACCCTTCTCATGAAAAAGTGGATGGAGGAGGAACTTCCCGATCATGACACTAATGTCCCTATGACGGGCAAGCAAGAAGCTAAATGTCTGTAAGTAAGTAAGTAAGGAAGCATTTCAAATAGAACGCGCGAACTCATGTCCCCAAAGAATGTGATCTATTTCTTCCTTCGCCTTCTGACAAAGAATACAACAAAACAAGTCAAATACCAATACATCCTCCTCGAAAAAATTTCACTTTCATAGGAATCTTTATCCTCCAAAGGACTGAAAAAAATACTCACTAGTGAGAGTTTATTTTATTTATCCAAGAAATGATGCTCTATTCTTATATACAAGGAATTTTGGTTAATCCACATCATTTTTCTACTTTTGTGTAAGGTATGTCATGTCCTTTTATTTTGACATGTTAAGTAAATATCCTAGTCTGTGTTTGCATGTTGCAAGTGGCTGATATAAAGTTTGCACATCTTTTCAATAATGCTCGCGTTTATGTCTTTTGGTCTCAGGTTTTTGGTTATTTGCTAGTCCTTGTTTGTGAGTCCCTTCTGTGTAGTGCAGCTAGCTCTCTAAACTTCTATTATCAATAAGAGGCATGCTTGTCTGGATTCTCCTTTTTATCCACTTTGGCAGTATTGATAAAGAGTTGAGAGTCTCAACAAAATTAAGACCCTGAAGAAGTAGAATATTTATTTCTCTATGACTCCCTAATTCCTTCGAGGTGGTTCAGAGTGCTTACATTAGTATTCCTGAAAGAGTGATATTACCGAGTGACCTGTTTTCTTTGTGCGGCGACCACAAAGTGCTACATCAGATGACTGAAAGTGCTATGGCGGTAGTCAAACCTGAGGTACAATGCTTTACAAATTTACACTAGGACCAAGAAACTGTCTTCGTTTAAGAACATGGCACAAAATTTTCCATGGAGTTTTTTCACCTCCCACACGCGCACAGTTTTTGGGATGATATGGATTATACATGTAATGCATTTAGGGGTTCTTGGAGATCCTATGTGTTTTGATGATCAGTATACAGCAGGCGACGGTTTAAGAAAAAATCACACTTATCTAAGTGGCTGCATCGGGCAATTCATTATTTGTTGGTTAATTTTCCTTCTGAAATGTGATTTTTTTTCCAGATGAAGTCTTACATTTGGCTTCAAACTGCTGATGGCTCAATACAACAAGTTGAAGAAGAAGTTGCTATGTTTTGCCCTATGATTTGTCGGGAAATACTCCAAACAGGGATGGGATCCTCCAAGAATTATGCAATATCTCTTCCGCAGCGAGTGAATCCTGCTATATTAGGCTTAATTCTTGACTATTGCAGGTTCCATCAAGTACCGGGTCGCTCCAATAAGGTCAGTATATCTCTGAACCTGTATTTTCCTCTAACCACAATCATCAGTTATGGAGATGTGGAGATTGAATGGACGCTGTTACTTATGGACAACTCAGTAGTCATATTACAAATGAACATGGGTATTATTTTCCATAGGAGCGTAAGACGTTTGATGAGAAATTCATTCGCATGGATACAAAAAAGCTATGTGAGTTGACGTCTGCTGCTGACAGCCTCCAATTGAAACCGTTGGTTGATCTAACTAGTCGAGCACTTGCTCGAATTATTGAAGGAAAGACTCCAGAGGAGATCAGGGAGACATTTCACCTACCTGATGATCTCACAGAGGTGCGTCCCACACTCACACCCAAAACCAACTCACACACTCACATATTCAGTTTAAGTGTCTCACTCAGACTTAATTCTACAGGAAGAAAAGTTGGAGCCCTTACGCAACATAACAGATGATCCACGCATTCGGCTCTTAAATAGATTATATGCACGGAAAAGGAAAGAATTAAGAGAAAGAGAGAAATTGAAGGTGAATTACCTTTTTACTAATGGAAAAAAAATATTTATAACGGTAGAACATATTAGGAGAAAGAGTGAGGTATTCTCTAATAAAGAAAATGAAAATTACACGATAAAAAAAAAAGCCTAAAATACCCAAAAATCTGTACTCTTTGCTATTTTGTTCACATCCTTGTTTTTAACCCTATCCAAGGCTCTGAGTAGTATACTTAATCTGACTTTGAGTTGTGTTATATAATTTTAATCTCCCAATAGCAATTTAGCACGTCATTTTTCACATCTTTCAGAATGTTGAGATCGAGGAGCGGGTGGATGATAGATCAGTCGATGACCTTCTGTCATTTATAAATGGAGGAGACGGAGGTACTTGAGAATTGTTCACTCGTTCTTGCTCTTTCTGTTTCATTTCATGGTCTTAACTTTCTACTGGGCTGTCCTCTTTTCATGCTCTAGCCTTAATATCACATCTTGAATTTTAGTGTCCTTGTCAAGTGGTTTTGCAGTATATAAGAATTTGCCACAATTTACCTGTAAACATGGGGAGAGAAGTTGCTACTTATCCGTACTCTTTCGAGATTCTCAGTGCTAAATGTCTCTTATTTTTTCTTTGTAATTCAACCACTATTATTCCACACGCAGATTCAAAGGCAGTAAAAGCAAACAAAAACAAAAAGAAAAATCGGAGGAGAAAGGATCAACAGAAGGATTCTTCTTCAACCAATGAGAATGGGAACCATGATAAAATAGAGGTTTGCATCTGTGCATAATTTTTTGTATTTGGCTTCACATCAGAAGTAGCTCCAATTATTGAATTTTGCAATCTTATATTGTTTAGGAGTTGGATGCACTTCCTTCTTGTTGCCAGAATAATGAGTTTGACAAGATTTCGGGGGCATCTCCGAGTAGAACTGTGAAATCACAGGATTCAGCAGTTTCCATATATTCATCTAAGATCGAGTTTGATGATGCTGATATGTATGATGATCTAGATCCTGCGATGAAGGAGGAACTTGACAGGTCAGATATGTCAAATGAATGTTGTACTGAACCCTTTTTCCAACCCACTTTATTCAACTGTCGGGAAATGTAGTGGACAACATTGAACCTTTTTCTCAGTCTTAGTGCTTGCTTCTTCTGCGTGCTCATATGCTATAAGGTTCTAGGTGATATTTGATTTTAATTTCTGATTTGTGACGTTCCGGTTTTCTTCTCTTTATTTAATGAGTGAATTGTTCTAATTTGGCTCTGTGGGATAGAAGCGAAATGGTAATTATATTTTTTTTTAGGCTTTGAGGATTAGTACTGAGCTCAATTTCAGTCACGCGTGTCATCTGCTTATGGAAAAAATTATTGGGGTGGTGGTGGTTCTTTTTTTGGTTGGGGGGAGGGGGATGTATTGGACGAGGGTGCCAATTGTGTTTAAATTTTCCAACTCCCTTGCCTGGAACCTTACACTTAGGAGGCTTTTATGACTGGGAGATGAACGACGGGGCAGGATACAGAATTTCTTTACAGGAAGCTTTGATGCAATCTGATTCGATAAGGTCATTGTCCTAAGAAGACAACTGTTTTGATGGTCAGTAGCTCTTTGCAGCATTAACAGGTTCAAAAAGAGGAACCCTAATCTGCAGTTCTTTTTCAAATGTGTGTTTTGTTATGGGAATGAGACTCTCTCCGAATGTAGCTTTGCCTTCAAGGACTAGAGTTTTATTTGTAATCAATTTGGTGTGGTGTGGTGTTTGAACTAAGAACAAGTTGGGGGGATGGCTTCTGGACTTTCTTCTAGGATGATGGTTCAAGGACAAGGGCAAAATTTAAACGCTTCTGAAGCTCGTTTGTAGTTTGTATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTAGAATTTTCATTGATAAGTTGAATTGTTTTGAATCTTTATGTGATTATTTATGTTTCACAGCCTCTAATTGGAGTGTGCAACACAAACTTTGTTTCTACTCTACTTCCACCTCGAAATTAGATTGGAACTTCTATTTGATCCTAAGTCGGGTTAAGGGACATCTCGTCCTGTGTTCCTAAAGTTTTTGTTGGCTGGCTTCTTTTTTTAATGAGACATCTTGATCTGTTTCATATAAAAAGAAATGTTACTGAAAAGGCTGTTAGAAACCATACACCATCTAGCCTGTAGAAAAGAAATCATTCTTTCCCAAATTTCATGGGGAGGGGAAAAACAATGTCTTAGAAGTTGTGACAAGTCTTTGGTCATGAATATTTAATTCATAAATATCTTTCGTCAACGATACACACACTGTAACAGCCCAAGCCCTCCCAAAGTAGACAATATGTGCTAGCGGTGGGCTTGGGCTGTTACACACACATCAGGTAAAGGACTGTTTACATGATGAGCAGTCCCTTGTACTAACCATAATGTCTCAAATGGATGTATATGTTATTATTCTGCCATATTGAAGTCGGTCTGAATCATATTTTCCAGGCGTGTATGTGTAGTAGCTGATTGCGGTCGTCCTCAAAATCCCCTTCTTTTTGTCACCATTTATGTCACCATTTAAGTTAGTTAATCTCTTGGATGCAGGGAAGTAGAAGACTTTGCTAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTCTATCGCTAGGCCAAGAAAGAAAACTGGTGACCGTATTAAATGGCAATGGTTCATCAACCAGATTCACAAGT

mRNA sequence

GAAACCCTATCTCCAGCTCCTCCTTCTTCTTCCAATCTTTCATGTTCTGTGCAACATTTCCATTTTGCAAGGTTTTTGGTTATTTGCTAGTCCTTGTTTGTGAGTCCCTTCTGTGTAGTGCAGCTAGCTCTCTAAACTTCTATTATCAATAAGAGGCATGCTTGTCTGGATTCTCCTTTTTATCCACTTTGGCAGTATTGATAAAGAGTTGAGAGTCTCAACAAAATTAAGACCCTGAAGAAGTAGAATATTTATTTCTCTATGACTCCCTAATTCCTTCGAGGTGGTTCAGAGTGCTTACATTAGTATTCCTGAAAGAGTGATATTACCGAGTGACCTGTTTTCTTTGTGCGGCGACCACAAAGTGCTACATCAGATGACTGAAAGTGCTATGGCGGTAGTCAAACCTGAGATGAAGTCTTACATTTGGCTTCAAACTGCTGATGGCTCAATACAACAAGTTGAAGAAGAAGTTGCTATGTTTTGCCCTATGATTTGTCGGGAAATACTCCAAACAGGGATGGGATCCTCCAAGAATTATGCAATATCTCTTCCGCAGCGAGTGAATCCTGCTATATTAGGCTTAATTCTTGACTATTGCAGGTTCCATCAAGTACCGGGTCGCTCCAATAAGGTCAGTATATCTCTGAACCTGTATTTTCCTCTAACCACAATCATCAGTTATGGAGATGTGGAGATTGAATGGACGCTGTTACTTATGGACAACTCAGTAGTCATATTACAAATGAACATGGGTATTATTTTCCATAGGAGCGTAAGACGTTTGATGAGAAATTCATTCGCATGGATACAAAAAAGCTATGTGAGTTGACGTCTGCTGCTGACAGCCTCCAATTGAAACCGTTGGTTGATCTAACTAGTCGAGCACTTGCTCGAATTATTGAAGGAAAGACTCCAGAGGAGATCAGGGAGACATTTCACCTACCTGATGATCTCACAGAGGAAGAAAAGTTGGAGCCCTTACGCAACATAACAGATGATCCACGCATTCGGCTCTTAAATAGATTATATGCACGGAAAAGGAAAGAATTAAGAGAAAGAGAGAAATTGAAGAATGTTGAGATCGAGGAGCGGGTGGATGATAGATCAGTCGATGACCTTCTGTCATTTATAAATGGAGGAGACGGAGATTCAAAGGCAGTAAAAGCAAACAAAAACAAAAAGAAAAATCGGAGGAGAAAGGATCAACAGAAGGATTCTTCTTCAACCAATGAGAATGGGAACCATGATAAAATAGAGGAGTTGGATGCACTTCCTTCTTGTTGCCAGAATAATGAGTTTGACAAGATTTCGGGGGCATCTCCGAGTAGAACTGTGAAATCACAGGATTCAGCAGTTTCCATATATTCATCTAAGATCGAGTTTGATGATGCTGATATGTATGATGATCTAGATCCTGCGATGAAGGAGGAACTTGACAGGGAAGTAGAAGACTTTGCTAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTCTATCGCTAGGCCAAGAAAGAAAACTGGTGACCGTATTAAATGGCAATGGTTCATCAACCAGATTCACAAGT

Coding sequence (CDS)

ATGGATACAAAAAAGCTATGTGAGTTGACGTCTGCTGCTGACAGCCTCCAATTGAAACCGTTGGTTGATCTAACTAGTCGAGCACTTGCTCGAATTATTGAAGGAAAGACTCCAGAGGAGATCAGGGAGACATTTCACCTACCTGATGATCTCACAGAGGAAGAAAAGTTGGAGCCCTTACGCAACATAACAGATGATCCACGCATTCGGCTCTTAAATAGATTATATGCACGGAAAAGGAAAGAATTAAGAGAAAGAGAGAAATTGAAGAATGTTGAGATCGAGGAGCGGGTGGATGATAGATCAGTCGATGACCTTCTGTCATTTATAAATGGAGGAGACGGAGATTCAAAGGCAGTAAAAGCAAACAAAAACAAAAAGAAAAATCGGAGGAGAAAGGATCAACAGAAGGATTCTTCTTCAACCAATGAGAATGGGAACCATGATAAAATAGAGGAGTTGGATGCACTTCCTTCTTGTTGCCAGAATAATGAGTTTGACAAGATTTCGGGGGCATCTCCGAGTAGAACTGTGAAATCACAGGATTCAGCAGTTTCCATATATTCATCTAAGATCGAGTTTGATGATGCTGATATGTATGATGATCTAGATCCTGCGATGAAGGAGGAACTTGACAGGGAAGTAGAAGACTTTGCTAGAAGATTGAATTCAGATTGGCCAGAAAGAGTGCAAGAAATTCTATCGCTAGGCCAAGAAAGAAAACTGGTGACCGTATTAAATGGCAATGGTTCATCAACCAGATTCACAAGT

Protein sequence

MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAVKANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKSQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQERKLVTVLNGNGSSTRFTS

Homology

[Close]

BLAST of Carg23174 vs. NCBI nr
Match: XP_022922234.1 (SKP1-like protein 21 isoform X2 [Cucurbita moschata] >XP_023549789.1 SKP1-like protein 21 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 218 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 277

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 278 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 337

Query: 241 KLVTVLNGNGSSTRFTS 258
           KLVTVLNGNGSSTRFTS
Sbjct: 338 KLVTVLNGNGSSTRFTS 354

[Close]

BLAST of Carg23174 vs. NCBI nr
Match: KAG7016860.1 (SKP1-like protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240

Query: 241 KLVTVLNGNGSSTRFTS 258
           KLVTVLNGNGSSTRFTS
Sbjct: 241 KLVTVLNGNGSSTRFTS 257

[Close]

BLAST of Carg23174 vs. NCBI nr
Match: XP_022922231.1 (SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_022922232.1 SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_022922233.1 SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_023549784.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549785.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549786.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549788.1 SKP1-like protein 21 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 218 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 277

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 278 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 337

Query: 241 KLVTVLNGNGSSTRFT 257
           KLVTVLNGNGSSTRFT
Sbjct: 338 KLVTVLNGNGSSTRFT 353

[Close]

BLAST of Carg23174 vs. NCBI nr
Match: KAG6579379.1 (SKP1-like protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 144 MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 203

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 204 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 263

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 264 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 323

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 324 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 383

Query: 241 KLVTVLNGNGSSTRFT 257
           KLVTVLNGNGSSTRFT
Sbjct: 384 KLVTVLNGNGSSTRFT 399

[Close]

BLAST of Carg23174 vs. NCBI nr
Match: XP_022973001.1 (SKP1-like protein 21 isoform X2 [Cucurbita maxima])

HSP 1 Score: 478.8 bits (1231), Expect = 3.0e-131
Identity = 256/257 (99.61%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 218 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 277

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSK EFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 278 QDSAVSIYSSKNEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 337

Query: 241 KLVTVLNGNGSSTRFTS 258
           KLVTVLNGNGSSTRFTS
Sbjct: 338 KLVTVLNGNGSSTRFTS 354

[Close]

BLAST of Carg23174 vs. ExPASy Swiss-Prot
Match: Q8LF97 (SKP1-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=ASK21 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.0e-71
Identity = 163/258 (63.18%), Postives = 194/258 (75.19%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL
Sbjct: 99  MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPL 158

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           +N  DDPRIRLLNRLYA+KRKEL+EREKLK+VE+EE VD+RSVDDLLSFING   D K V
Sbjct: 159 KNTMDDPRIRLLNRLYAKKRKELKEREKLKSVEVEEHVDERSVDDLLSFING--RDPKVV 218

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIE-ELDALPSCCQNNEFDKISGASPSRTVK 180
           K +K+KKKN++RK+Q+  SS    NG  + +E +L  L S  Q+ E    + +       
Sbjct: 219 KTSKSKKKNKKRKEQKNGSS----NGTCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSN 278

Query: 181 SQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 240
                  I++ K EF+D  + D++DPA+KE LDREVEDFARRLNS W      +LS+GQE
Sbjct: 279 LPSMEDDIFTPKTEFEDGYIDDEIDPALKELLDREVEDFARRLNSSW------VLSIGQE 338

Query: 241 RKLVTV-LNGNGSSTRFT 257
           R+ V   +NGNG+S R T
Sbjct: 339 RQPVNFSINGNGTSRRLT 344

[Close]

BLAST of Carg23174 vs. ExPASy Swiss-Prot
Match: A8MQG7 (SKP1-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=ASK20 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.7e-66
Identity = 157/258 (60.85%), Postives = 188/258 (72.87%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL
Sbjct: 99  MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPL 158

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           +N  DDPRIRLLNRLYA+KRKEL+ERE+LKNVE+EE VD+RSVDDLLSFING   D KAV
Sbjct: 159 KNSMDDPRIRLLNRLYAKKRKELKERERLKNVEVEEHVDERSVDDLLSFING--RDHKAV 218

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDK-IEELDALPSCCQNNEFDKISGASPSRTVK 180
           K +K KKK +++KDQ+  SS    N  HDK   +L +   C +        G+S      
Sbjct: 219 KMSKGKKKKKKKKDQKIVSS----NNIHDKESHDLRSKQQCVEE------IGSSMREVPN 278

Query: 181 SQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 240
              +   I +     +D D+ D++DPAM+E LDREVEDFA+RLNS+W      + SLG+E
Sbjct: 279 LLSAEDDISTPNAGSEDEDIDDEIDPAMRELLDREVEDFAQRLNSNW------VRSLGKE 338

Query: 241 RKLVTV-LNGNGSSTRFT 257
           R+ V   +NGNG++ R T
Sbjct: 339 RRPVHFSINGNGTTRRHT 338

[Close]

BLAST of Carg23174 vs. ExPASy Swiss-Prot
Match: Q3ZCF3 (S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.2e-07
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 59
           +D   L EL  AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 95  VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of Carg23174 vs. ExPASy Swiss-Prot
Match: P63209 (S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 6.2e-07
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 59
           +D   L EL  AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 95  VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of Carg23174 vs. ExPASy Swiss-Prot
Match: Q5ZKF5 (S-phase kinase-associated protein 1 OS=Gallus gallus OX=9031 GN=SKP1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.2e-07
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLE 59
           +D   L EL  AA+ L +K L+D+T + +A +I+GKTPEEIR+TF++ +D TEEE+ +
Sbjct: 95  VDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQ 152

[Close]

BLAST of Carg23174 vs. ExPASy TrEMBL
Match: A0A6J1E2T9 (SKP1-like protein 21 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 218 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 277

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 278 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 337

Query: 241 KLVTVLNGNGSSTRFTS 258
           KLVTVLNGNGSSTRFTS
Sbjct: 338 KLVTVLNGNGSSTRFTS 354

[Close]

BLAST of Carg23174 vs. ExPASy TrEMBL
Match: A0A6J1E2N5 (SKP1-like protein 21 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 6.4e-132
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 218 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 277

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 278 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 337

Query: 241 KLVTVLNGNGSSTRFT 257
           KLVTVLNGNGSSTRFT
Sbjct: 338 KLVTVLNGNGSSTRFT 353

[Close]

BLAST of Carg23174 vs. ExPASy TrEMBL
Match: A0A6J1I7H6 (SKP1-like protein 21 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471520 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 256/257 (99.61%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 218 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 277

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSK EFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 278 QDSAVSIYSSKNEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 337

Query: 241 KLVTVLNGNGSSTRFTS 258
           KLVTVLNGNGSSTRFTS
Sbjct: 338 KLVTVLNGNGSSTRFTS 354

[Close]

BLAST of Carg23174 vs. ExPASy TrEMBL
Match: A0A6J1I6B7 (SKP1-like protein 21 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471520 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.2e-131
Identity = 255/256 (99.61%), Postives = 255/256 (99.61%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 180
           KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS
Sbjct: 218 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVKS 277

Query: 181 QDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 240
           QDSAVSIYSSK EFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER
Sbjct: 278 QDSAVSIYSSKNEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQER 337

Query: 241 KLVTVLNGNGSSTRFT 257
           KLVTVLNGNGSSTRFT
Sbjct: 338 KLVTVLNGNGSSTRFT 353

[Close]

BLAST of Carg23174 vs. ExPASy TrEMBL
Match: A0A1S3AUU0 (SKP1-like protein 21 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482906 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 247/258 (95.74%), Postives = 251/258 (97.29%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL
Sbjct: 98  MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 157

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV
Sbjct: 158 RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 217

Query: 121 KANKNKKKNRRRKDQQKDSSS-TNENGNHDKIEELDALPSCCQNNEFDKISGASPSRTVK 180
           K NKNKKKNRRRKDQQKDSSS TNENGNHDKIEELDALPSCCQNNEF+KI GASPSRTVK
Sbjct: 218 KTNKNKKKNRRRKDQQKDSSSTTNENGNHDKIEELDALPSCCQNNEFNKILGASPSRTVK 277

Query: 181 SQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 240
           SQDSA ++YSSKIEFDDAD+YDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE
Sbjct: 278 SQDSAAAMYSSKIEFDDADIYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 337

Query: 241 RKLVTVLNGNGSSTRFTS 258
           R LVTVL GNGSS RFTS
Sbjct: 338 RNLVTVLTGNGSSPRFTS 355

[Close]

BLAST of Carg23174 vs. TAIR 10
Match: AT3G61415.1 (SKP1-like 21 )

HSP 1 Score: 268.5 bits (685), Expect = 5.7e-72
Identity = 163/258 (63.18%), Postives = 194/258 (75.19%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL
Sbjct: 99  MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPL 158

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           +N  DDPRIRLLNRLYA+KRKEL+EREKLK+VE+EE VD+RSVDDLLSFING   D K V
Sbjct: 159 KNTMDDPRIRLLNRLYAKKRKELKEREKLKSVEVEEHVDERSVDDLLSFING--RDPKVV 218

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIE-ELDALPSCCQNNEFDKISGASPSRTVK 180
           K +K+KKKN++RK+Q+  SS    NG  + +E +L  L S  Q+ E    + +       
Sbjct: 219 KTSKSKKKNKKRKEQKNGSS----NGTCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSN 278

Query: 181 SQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 240
                  I++ K EF+D  + D++DPA+KE LDREVEDFARRLNS W      +LS+GQE
Sbjct: 279 LPSMEDDIFTPKTEFEDGYIDDEIDPALKELLDREVEDFARRLNSSW------VLSIGQE 338

Query: 241 RKLVTV-LNGNGSSTRFT 257
           R+ V   +NGNG+S R T
Sbjct: 339 RQPVNFSINGNGTSRRLT 344

[Close]

BLAST of Carg23174 vs. TAIR 10
Match: AT3G61415.2 (SKP1-like 21 )

HSP 1 Score: 268.5 bits (685), Expect = 5.7e-72
Identity = 163/258 (63.18%), Postives = 194/258 (75.19%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRE FHLPDDLTEEEKLEPL
Sbjct: 99  MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPL 158

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           +N  DDPRIRLLNRLYA+KRKEL+EREKLK+VE+EE VD+RSVDDLLSFING   D K V
Sbjct: 159 KNTMDDPRIRLLNRLYAKKRKELKEREKLKSVEVEEHVDERSVDDLLSFING--RDPKVV 218

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDKIE-ELDALPSCCQNNEFDKISGASPSRTVK 180
           K +K+KKKN++RK+Q+  SS    NG  + +E +L  L S  Q+ E    + +       
Sbjct: 219 KTSKSKKKNKKRKEQKNGSS----NGTCEALEKDLHNLDSKSQSAEIVDNTASCLGDVSN 278

Query: 181 SQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 240
                  I++ K EF+D  + D++DPA+KE LDREVEDFARRLNS W      +LS+GQE
Sbjct: 279 LPSMEDDIFTPKTEFEDGYIDDEIDPALKELLDREVEDFARRLNSSW------VLSIGQE 338

Query: 241 RKLVTV-LNGNGSSTRFT 257
           R+ V   +NGNG+S R T
Sbjct: 339 RQPVNFSINGNGTSRRLT 344

[Close]

BLAST of Carg23174 vs. TAIR 10
Match: AT2G45950.1 (SKP1-like 20 )

HSP 1 Score: 251.9 bits (642), Expect = 5.5e-67
Identity = 157/258 (60.85%), Postives = 188/258 (72.87%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL
Sbjct: 99  MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPL 158

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           +N  DDPRIRLLNRLYA+KRKEL+ERE+LKNVE+EE VD+RSVDDLLSFING   D KAV
Sbjct: 159 KNSMDDPRIRLLNRLYAKKRKELKERERLKNVEVEEHVDERSVDDLLSFING--RDHKAV 218

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDK-IEELDALPSCCQNNEFDKISGASPSRTVK 180
           K +K KKK +++KDQ+  SS    N  HDK   +L +   C +        G+S      
Sbjct: 219 KMSKGKKKKKKKKDQKIVSS----NNIHDKESHDLRSKQQCVEE------IGSSMREVPN 278

Query: 181 SQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 240
              +   I +     +D D+ D++DPAM+E LDREVEDFA+RLNS+W      + SLG+E
Sbjct: 279 LLSAEDDISTPNAGSEDEDIDDEIDPAMRELLDREVEDFAQRLNSNW------VRSLGKE 338

Query: 241 RKLVTV-LNGNGSSTRFT 257
           R+ V   +NGNG++ R T
Sbjct: 339 RRPVHFSINGNGTTRRHT 338

[Close]

BLAST of Carg23174 vs. TAIR 10
Match: AT2G45950.2 (SKP1-like 20 )

HSP 1 Score: 251.9 bits (642), Expect = 5.5e-67
Identity = 157/258 (60.85%), Postives = 188/258 (72.87%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           MDTK+LCELTSAADSLQLKPLVDLTSRALARIIEGK PEEIRE FHLPDDLTEEEKLEPL
Sbjct: 99  MDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTEEEKLEPL 158

Query: 61  RNITDDPRIRLLNRLYARKRKELREREKLKNVEIEERVDDRSVDDLLSFINGGDGDSKAV 120
           +N  DDPRIRLLNRLYA+KRKEL+ERE+LKNVE+EE VD+RSVDDLLSFING   D KAV
Sbjct: 159 KNSMDDPRIRLLNRLYAKKRKELKERERLKNVEVEEHVDERSVDDLLSFING--RDHKAV 218

Query: 121 KANKNKKKNRRRKDQQKDSSSTNENGNHDK-IEELDALPSCCQNNEFDKISGASPSRTVK 180
           K +K KKK +++KDQ+  SS    N  HDK   +L +   C +        G+S      
Sbjct: 219 KMSKGKKKKKKKKDQKIVSS----NNIHDKESHDLRSKQQCVEE------IGSSMREVPN 278

Query: 181 SQDSAVSIYSSKIEFDDADMYDDLDPAMKEELDREVEDFARRLNSDWPERVQEILSLGQE 240
              +   I +     +D D+ D++DPAM+E LDREVEDFA+RLNS+W      + SLG+E
Sbjct: 279 LLSAEDDISTPNAGSEDEDIDDEIDPAMRELLDREVEDFAQRLNSNW------VRSLGKE 338

Query: 241 RKLVTV-LNGNGSSTRFT 257
           R+ V   +NGNG++ R T
Sbjct: 339 RRPVHFSINGNGTTRRHT 338

[Close]

BLAST of Carg23174 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 )

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-07
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 1   MDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPL 60
           +D   L EL  AA+ L +K L+DLT + +A +I+GKTPEEIR TF++ +D T EE+ E  
Sbjct: 93  IDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVR 152

Query: 61  R 62
           R
Sbjct: 153 R 153

The following BLAST results are available for this feature:

BLAST of Carg23174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922234.1	4.6e-132	100.00	SKP1-like protein 21 isoform X2 [Cucurbita moschata] >XP_023549789.1 SKP1-like p...	[more]
KAG7016860.1	4.6e-132	100.00	SKP1-like protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022922231.1	1.3e-131	100.00	SKP1-like protein 21 isoform X1 [Cucurbita moschata] >XP_022922232.1 SKP1-like p...	[more]
KAG6579379.1	1.3e-131	100.00	SKP1-like protein 21, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022973001.1	3.0e-131	99.61	SKP1-like protein 21 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg23174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF97	8.0e-71	63.18	SKP1-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=ASK21 PE=2 SV=1	[more]
A8MQG7	7.7e-66	60.85	SKP1-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=ASK20 PE=2 SV=1	[more]
Q3ZCF3	6.2e-07	48.28	S-phase kinase-associated protein 1 OS=Bos taurus OX=9913 GN=SKP1 PE=2 SV=1	[more]
P63209	6.2e-07	48.28	S-phase kinase-associated protein 1 OS=Cavia porcellus OX=10141 GN=SKP1 PE=2 SV=...	[more]
Q5ZKF5	6.2e-07	48.28	S-phase kinase-associated protein 1 OS=Gallus gallus OX=9031 GN=SKP1 PE=2 SV=1	[more]

BLAST of Carg23174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2T9	2.2e-132	100.00	SKP1-like protein 21 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE...	[more]
A0A6J1E2N5	6.4e-132	100.00	SKP1-like protein 21 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430276 PE...	[more]
A0A6J1I7H6	1.4e-131	99.61	SKP1-like protein 21 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471520 PE=3...	[more]
A0A6J1I6B7	4.2e-131	99.61	SKP1-like protein 21 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471520 PE=3...	[more]
A0A1S3AUU0	1.2e-125	95.74	SKP1-like protein 21 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482906 PE=3 SV=...	[more]

BLAST of Carg23174 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61415.1	5.7e-72	63.18	SKP1-like 21	[more]
AT3G61415.2	5.7e-72	63.18	SKP1-like 21	[more]
AT2G45950.1	5.5e-67	60.85	SKP1-like 20	[more]
AT2G45950.2	5.5e-67	60.85	SKP1-like 20	[more]
AT1G75950.1	2.2e-07	49.18	S phase kinase-associated protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..150
None	No IPR available	PANTHER	PTHR11165:SF140	OS03G0107000 PROTEIN	coord: 1..169
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 19..56 e-value: 4.0E-13 score: 49.2
IPR011333	SKP1/BTB/POZ domain superfamily	GENE3D	3.30.710.10	Potassium Channel Kv1.1; Chain A	coord: 1..63 e-value: 4.5E-16 score: 61.2
IPR016897	S-phase kinase-associated protein 1	PANTHER	PTHR11165	SKP1	coord: 1..169
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 2..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23174-RA	Carg23174-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097602	cullin family protein binding