Carg23173 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23173
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein
Location	Carg_Chr15: 7797076 .. 7799146 (+)
RNA-Seq Expression	Carg23173
Synteny	Carg23173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGCGGAGTGGGGCCCACATGCAGTGACATAAGCCTCCCAACGGAGCAAGAAATCCTTCACAAAGAATCATGCGATCCAAAGCAGCAGCAGCAGCAGCAGGAGGAGGGAATCAAATCACCCGGCGGCGTTGGGCGGAAGAGGGCGGCGGCGGCGGCGGCGTTTCTGAGTTTCCAGCAACTGAACGCGCTTGCGGTGGTTGTGATATTCTCAGCCAGTGGGATGGTGTGCGCTGAAGACTTGGCGTTTGTGGTATTTTCTATGATGTATATGTACTTCATTTCCAGAGTGGCGTTTCCGCCGCTGGCCGGCGCCGGAGAACCGACGGTGTTCAGCCAGGAGAATAGGCTGCTCCGCTTGTATGGATTCTTCACCATCGTTGTGGGATTCTTCCTCCCTATAGCCTACATTCTGGAGGGCTTCTTTGAAGAAGATAAAGAAGGCATCAAAGCCGCTTCTCCCCATGTCTTTCTTCTTGCTAGCCAGGTTTAGCATCTTCAAAAGACTGTACACTGTTGTAATGGTTCATGTTCCCTACTAACCGATATTATTCTATTTGATCGTATTTAAAACACTTTTTAGGGATTGGTTTTGAACACTCTCCTCTCCAACCGATATAGGATCTCACAACCACATCGGTTGGAGAAAGTAACGAGACCCTTTATAAGGATGTAGAAACTTCTCCAATCGATTGGAGGCGGAAACGAGGGAATGTGTGTCAGCGAGAACGTTGGCCCAAAAGGTGGAGGGTAAGATATCACATTAGTTGGAAAGGAGAATAAAACCCCGTTTATAAGAGTGTGGAAACCTCTACCATCGATTGGAGAATGGAATGACGGCACGCTGACCCCAAAGGGGTGGATTGTGAGATCCCACTAGTTGGAGAGGAAAACGAAACACTCTTTATAATGTGTGGAAACCTCTCTTATCGATGGAAGAAGAGAATGAGTGCCAACGAGCACTCTGGGCTCCAAAGGGGTTGATTGTGAGATCCTGGAAAAACGAAACACCTTTATAATGGTGTGGAAACCTTTTTCATCGATTGGAGAAGAAATGAGTGCCAACAAGCCATTTGGGCTCCAAAGAGGTGTATTATGAGATCCCGCCAACAAGCCATTTGGGCTCCAAAGGGGTGTATTATGAGATCCCACCAACAAGCCATTTGGGCTCCAAAGGGGTGTATTATGAGATCCCGCCAACAAGCCATTTAGGCTCCAGAGGGGTGTATTATGAGATCCCGCCAACAAGCCATCTGAGCTCCAAAGGGGTGTATTATGAGATCCCACCAGGGGGAGACACTTTTTATAATGGTGTGGAAACCTCTCTCGTCGATTAGAGAAGATAATGAGTGCCAACGAGTACCCTGGGCTTCTCTAAGGAGTGGATTGTGAGATCCCACTGGTTGGAGAGGAAAACAAAACAACCTTTATAATGTTGTGGAGACCTCTCTCTTCGATTGAAGAGAATGAGTGCCAACGAGCACTCTGGGCTCCAAAGGGGTGGATTGTGAGTTCCACTAGTTGAAGAGGAGAACGAAAAGTCTCAAGGGGAATATGGAAAAGGAAAGCCATTAGTGGTGGGCTTTGGACCATTACAATTATATATGCATCATTTATAGTTGTTTTGTTGACAGAGTTTCATGGAAGGCGTGGCGGGGAACAACAGATTCTCGACGCCAATCCGAGTGTTCGTGCCAGTATTGTACAACGCGAGAAGGGTGTTCACACTGACGGAGTGGCTGCGGGACGAGTTCGCGAAGGAAGACAAGGAGTACAGCGGGTCTGTGCGGCGGCAGATGATCGGAAGAGGGCTTGCGGTGGTGAACATGGCGGTTTGGAGCTTCAATCTGTTTGGGATCTTGTTGCCTTTGTATGTGCCGAAGGCATTGAAGAGATATTACTCTGTCAAAAAATCCAAAGATTGAGAGAGCTTTGTTTGGTTAATTATTCAAAATAACTGTGGTTGATCTGTTCTGGTTTTGTTTTAAGATAGCAATTATGTTTGAATAGTTTGGAGTTTTTGGATTGTAATGGAAGTTCTTAATTAATGTAACTTTCTGGGTTTTGCA

mRNA sequence

ATGTCCGGCGGAGTGGGGCCCACATGCAGTGACATAAGCCTCCCAACGGAGCAAGAAATCCTTCACAAAGAATCATGCGATCCAAAGCAGCAGCAGCAGCAGCAGGAGGAGGGAATCAAATCACCCGGCGGCGTTGGGCGGAAGAGGGCGGCGGCGGCGGCGGCGTTTCTGAGTTTCCAGCAACTGAACGCGCTTGCGGTGGTTGTGATATTCTCAGCCAGTGGGATGGTGTGCGCTGAAGACTTGGCGTTTGTGGTATTTTCTATGATGTATATGTACTTCATTTCCAGAGTGGCGTTTCCGCCGCTGGCCGGCGCCGGAGAACCGACGGTGTTCAGCCAGGAGAATAGGCTGCTCCGCTTGTATGGATTCTTCACCATCGTTGTGGGATTCTTCCTCCCTATAGCCTACATTCTGGAGGGCTTCTTTGAAGAAGATAAAGAAGGCATCAAAGCCGCTTCTCCCCATGTCTTTCTTCTTGCTAGCCAGGATCTCACAACCACATCGGTTGGAGAAAGTAACGAGACCCTTTATAAGGATGTAGAAACTTCTCCAATCGATTGGAGGCGGAAACGAGGGAATGTGTGTCAGCGAGAACGTTGGCCCAAAAGGTGGAGGAGTTTCATGGAAGGCGTGGCGGGGAACAACAGATTCTCGACGCCAATCCGAGTGTTCGTGCCAGTATTGTACAACGCGAGAAGGGTGTTCACACTGACGGAGTGGCTGCGGGACGAGTTCGCGAAGGAAGACAAGGAGTACAGCGGGTCTGTGCGGCGGCAGATGATCGGAAGAGGGCTTGCGGTGGTGAACATGGCGGTTTGGAGCTTCAATCTGTTTGGGATCTTGTTGCCTTTGTATGTGCCGAAGGCATTGAAGAGATATTACTCTGTCAAAAAATCCAAAGATTGAGAGAGCTTTGTTTGGTTAATTATTCAAAATAACTGTGGTTGATCTGTTCTGGTTTTGTTTTAAGATAGCAATTATGTTTGAATAGTTTGGAGTTTTTGGATTGTAATGGAAGTTCTTAATTAATGTAACTTTCTGGGTTTTGCA

Coding sequence (CDS)

ATGTCCGGCGGAGTGGGGCCCACATGCAGTGACATAAGCCTCCCAACGGAGCAAGAAATCCTTCACAAAGAATCATGCGATCCAAAGCAGCAGCAGCAGCAGCAGGAGGAGGGAATCAAATCACCCGGCGGCGTTGGGCGGAAGAGGGCGGCGGCGGCGGCGGCGTTTCTGAGTTTCCAGCAACTGAACGCGCTTGCGGTGGTTGTGATATTCTCAGCCAGTGGGATGGTGTGCGCTGAAGACTTGGCGTTTGTGGTATTTTCTATGATGTATATGTACTTCATTTCCAGAGTGGCGTTTCCGCCGCTGGCCGGCGCCGGAGAACCGACGGTGTTCAGCCAGGAGAATAGGCTGCTCCGCTTGTATGGATTCTTCACCATCGTTGTGGGATTCTTCCTCCCTATAGCCTACATTCTGGAGGGCTTCTTTGAAGAAGATAAAGAAGGCATCAAAGCCGCTTCTCCCCATGTCTTTCTTCTTGCTAGCCAGGATCTCACAACCACATCGGTTGGAGAAAGTAACGAGACCCTTTATAAGGATGTAGAAACTTCTCCAATCGATTGGAGGCGGAAACGAGGGAATGTGTGTCAGCGAGAACGTTGGCCCAAAAGGTGGAGGAGTTTCATGGAAGGCGTGGCGGGGAACAACAGATTCTCGACGCCAATCCGAGTGTTCGTGCCAGTATTGTACAACGCGAGAAGGGTGTTCACACTGACGGAGTGGCTGCGGGACGAGTTCGCGAAGGAAGACAAGGAGTACAGCGGGTCTGTGCGGCGGCAGATGATCGGAAGAGGGCTTGCGGTGGTGAACATGGCGGTTTGGAGCTTCAATCTGTTTGGGATCTTGTTGCCTTTGTATGTGCCGAAGGCATTGAAGAGATATTACTCTGTCAAAAAATCCAAAGATTGA

Protein sequence

MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQQLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLRLYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKDVETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTEWLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKSKD

Homology

[Close]

BLAST of Carg23173 vs. NCBI nr
Match: KAG7016859.1 (hypothetical protein SDJN02_21970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 597.0 bits (1538), Expect = 8.8e-167
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
           VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE
Sbjct: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300

Query: 301 KD 303
           KD
Sbjct: 301 KD 302

[Close]

BLAST of Carg23173 vs. NCBI nr
Match: KAG6579378.1 (hypothetical protein SDJN03_23826, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 484.6 bits (1246), Expect = 6.3e-133
Identity = 258/302 (85.43%), Postives = 259/302 (85.76%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQ+EGIKSPGGVGRKRAAAAAAFLSFQ
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQQEGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                     SFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE
Sbjct: 181 --------------------------SFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 259

Query: 301 KD 303
           KD
Sbjct: 301 KD 259

[Close]

BLAST of Carg23173 vs. NCBI nr
Match: XP_022973006.1 (uncharacterized protein LOC111471524 [Cucurbita maxima])

HSP 1 Score: 480.7 bits (1236), Expect = 9.2e-132
Identity = 256/302 (84.77%), Postives = 257/302 (85.10%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                     SFMEGVAGN+RFSTPIRVFVPVLYN RRVFTLTE
Sbjct: 181 --------------------------SFMEGVAGNDRFSTPIRVFVPVLYNTRRVFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKA KRYYSVKKS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKAFKRYYSVKKS 259

Query: 301 KD 303
           KD
Sbjct: 301 KD 259

[Close]

BLAST of Carg23173 vs. NCBI nr
Match: XP_023551347.1 (uncharacterized protein LOC111809194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 2.9e-130
Identity = 256/302 (84.77%), Postives = 258/302 (85.43%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQ EGIKSPGGVG+KRAAAAAAFLSFQ
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQ-EGIKSPGGVGQKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                     SFMEGVAGN+RFSTPIRVFVPVLYNARRVFTLTE
Sbjct: 181 --------------------------SFMEGVAGNDRFSTPIRVFVPVLYNARRVFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 258

Query: 301 KD 303
           KD
Sbjct: 301 KD 258

[Close]

BLAST of Carg23173 vs. NCBI nr
Match: XP_022922241.1 (uncharacterized protein LOC111430282 [Cucurbita moschata])

HSP 1 Score: 474.9 bits (1221), Expect = 5.0e-130
Identity = 256/302 (84.77%), Postives = 257/302 (85.10%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQ EGIKSPGGVGRKRAAAAAAFLSFQ
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQ-EGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                     SFMEGVAGN+RFS PIRVFVPVLYNARRVFTLTE
Sbjct: 181 --------------------------SFMEGVAGNDRFSMPIRVFVPVLYNARRVFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 258

Query: 301 KD 303
           KD
Sbjct: 301 KD 258

[Close]

BLAST of Carg23173 vs. ExPASy TrEMBL
Match: A0A6J1I7I0 (uncharacterized protein LOC111471524 OS=Cucurbita maxima OX=3661 GN=LOC111471524 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.4e-132
Identity = 256/302 (84.77%), Postives = 257/302 (85.10%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                     SFMEGVAGN+RFSTPIRVFVPVLYN RRVFTLTE
Sbjct: 181 --------------------------SFMEGVAGNDRFSTPIRVFVPVLYNTRRVFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKA KRYYSVKKS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKAFKRYYSVKKS 259

Query: 301 KD 303
           KD
Sbjct: 301 KD 259

[Close]

BLAST of Carg23173 vs. ExPASy TrEMBL
Match: A0A6J1E3L1 (uncharacterized protein LOC111430282 OS=Cucurbita moschata OX=3662 GN=LOC111430282 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.4e-130
Identity = 256/302 (84.77%), Postives = 257/302 (85.10%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQ EGIKSPGGVGRKRAAAAAAFLSFQ
Sbjct: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQ-EGIKSPGGVGRKRAAAAAAFLSFQ 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR
Sbjct: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                     SFMEGVAGN+RFS PIRVFVPVLYNARRVFTLTE
Sbjct: 181 --------------------------SFMEGVAGNDRFSMPIRVFVPVLYNARRVFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 258

Query: 301 KD 303
           KD
Sbjct: 301 KD 258

[Close]

BLAST of Carg23173 vs. ExPASy TrEMBL
Match: A0A5D3C472 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001060 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.9e-98
Identity = 199/302 (65.89%), Postives = 220/302 (72.85%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLP EQE +HKE+ DPKQ            GGVGR++   AAAFLS +
Sbjct: 1   MSGGVGPTCSDISLPKEQESIHKEAWDPKQ------------GGVGRRK---AAAFLSLR 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVV+IFSASGMVCAEDLAFVVFS+MYMYFISRVAFP + GAG+  VF  ENR+LR
Sbjct: 61  QLNALAVVIIFSASGMVCAEDLAFVVFSIMYMYFISRVAFPRMGGAGDAAVFGPENRVLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LY  F  ++G FLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYVLFAAMIGLFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                      FMEGVA N+RFSTPIRVFVPV YN+RR+FTLTE
Sbjct: 181 --------------------------VFMEGVAANDRFSTPIRVFVPVFYNSRRIFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRR M+GR LAV NMA+WSFNLFG LLP+Y+P+A KRYYS+ KS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYSLYKS 244

Query: 301 KD 303
           KD
Sbjct: 301 KD 244

[Close]

BLAST of Carg23173 vs. ExPASy TrEMBL
Match: A0A1S3AUS6 (uncharacterized protein LOC103482907 OS=Cucumis melo OX=3656 GN=LOC103482907 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.9e-98
Identity = 199/302 (65.89%), Postives = 220/302 (72.85%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPTCSDISLP EQE +HKE+ DPKQ            GGVGR++   AAAFLS +
Sbjct: 1   MSGGVGPTCSDISLPKEQESIHKEAWDPKQ------------GGVGRRK---AAAFLSLR 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVV+IFSASGMVCAEDLAFVVFS+MYMYFISRVAFP + GAG+  VF  ENR+LR
Sbjct: 61  QLNALAVVIIFSASGMVCAEDLAFVVFSIMYMYFISRVAFPRMGGAGDAAVFGPENRVLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LY  F  ++G FLPIAYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYVLFAAMIGLFLPIAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                      FMEGVA N+RFSTPIRVFVPV YN+RR+FTLTE
Sbjct: 181 --------------------------VFMEGVAANDRFSTPIRVFVPVFYNSRRIFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLRDEFAKEDKEYSGSVRR M+GR LAV NMA+WSFNLFG LLP+Y+P+A KRYYS+ KS
Sbjct: 241 WLRDEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYSLYKS 244

Query: 301 KD 303
           KD
Sbjct: 301 KD 244

[Close]

BLAST of Carg23173 vs. ExPASy TrEMBL
Match: A0A0A0KK26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141070 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.7e-94
Identity = 191/302 (63.25%), Postives = 215/302 (71.19%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGP C DISLP EQE +HKE+ DPKQ            G VGR++   AAAFLS +
Sbjct: 1   MSGGVGPICGDISLPKEQESIHKEAWDPKQ----------GGGSVGRRK---AAAFLSLR 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAGEPTVFSQENRLLR 120
           QLNALAVV+IFSASGMVCAEDL FV+FS+MYMYF+SRVAFP + GAG+  VF  ENR+LR
Sbjct: 61  QLNALAVVIIFSASGMVCAEDLVFVMFSIMYMYFLSRVAFPRIGGAGDAAVFGPENRVLR 120

Query: 121 LYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKD 180
           LY  F  +VG FLP+AYILEGFFEEDKEGIKAASPHVFLLASQ                 
Sbjct: 121 LYVLFAAMVGLFLPVAYILEGFFEEDKEGIKAASPHVFLLASQ----------------- 180

Query: 181 VETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTE 240
                                      FMEGVA N+ FSTPIRVFVPV YN+RR+FTLTE
Sbjct: 181 --------------------------VFMEGVAANDSFSTPIRVFVPVFYNSRRIFTLTE 240

Query: 241 WLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKS 300
           WLR+EFAKEDKEYSGSVRR M+GR LAV NMA+WSFNLFG LLP+Y+P+A KRYYS+ KS
Sbjct: 241 WLRNEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFKRYYSLYKS 246

Query: 301 KD 303
           KD
Sbjct: 301 KD 246

[Close]

BLAST of Carg23173 vs. TAIR 10
Match: AT5G52420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 205.7 bits (522), Expect = 5.3e-53
Identity = 116/300 (38.67%), Postives = 163/300 (54.33%), Query Frame = 0


Query: 1   MSGGVGPTCSDISLPTEQEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQ 60
           MSGGVGPT +DI+LP E+E         ++ Q Q    + S G          A F SF+
Sbjct: 1   MSGGVGPTYNDITLPKEEE---------EEHQTQSTSTVSSTG--------KPAGFFSFR 60

Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPLAGAG-EPTVFSQENRLL 120
           QLN LA++++ SASG+V  +D  F + +++Y +F+S++ FPP      +  + S  N++ 
Sbjct: 61  QLNILAIIIVLSASGLVTIQDFIFTILTLIYFFFLSKLIFPPHNNPNRDAPLTSSTNKIF 120

Query: 121 RLYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYK 180
           R+Y     +VG  +PI YI EG  E+DK G+ AA+PHVFLLASQ                
Sbjct: 121 RIYVTAAGIVGLIIPICYIFEGIVEDDKNGVSAAAPHVFLLASQ---------------- 180

Query: 181 DVETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLT 240
                                       FMEG+A    FS P R+ VP++YNARRV TL 
Sbjct: 181 ---------------------------IFMEGLATMFGFSAPARILVPIVYNARRVLTLV 240

Query: 241 EWLRDEFAKEDKEYSGSVRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKK 300
           EW+  EF++ED   + S RR   G+ LA  N+ +WSFNLFG+L+P+Y+P+A KRYY   K
Sbjct: 241 EWIMSEFSREDVTGTVSARRMYAGKVLAAANLGIWSFNLFGVLIPVYLPRAFKRYYGSDK 240

[Close]

BLAST of Carg23173 vs. TAIR 10
Match: AT5G23920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 5.9e-28
Identity = 83/286 (29.02%), Postives = 136/286 (47.55%), Query Frame = 0


Query: 18  QEILHKESCDPKQQQQQQEEGIKSPGGVGRKRAAAAAAFLSFQQLNALAVVVIFSASGMV 77
           +EI  K+  D K    Q        G + RKR           QL  L+ +++ +A G+V
Sbjct: 3   EEIREKDLTDSKPSPPQPP---PKRGLISRKR-----------QLVFLSFMILLAAKGLV 62

Query: 78  CAEDLAFVVFSMMYMY-FISRVAFPPLAGAGEPTVFSQENRLLRLYGFFTIVVGFFLPIA 137
              ++AFV+   +Y+Y F+SR AFP      +  + + +N+L + Y   T ++G   P+ 
Sbjct: 63  GIGEIAFVILCYIYLYEFLSRFAFPRKQTEQKKRLSNPKNKLFQAYFLATAIIGLLFPLC 122

Query: 138 YILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYKDVETSPIDWRRKRGNVC 197
           YI +G +  D  G  AA+PH+FLL+ Q                                 
Sbjct: 123 YIGDGIYRGDIHGAGAAAPHLFLLSGQ--------------------------------- 182

Query: 198 QRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLTEWLRDEFAKEDKEYSGS 257
                     +F E +  ++++S PI +  PV YNARR+F L +W++ EF+  D +  G 
Sbjct: 183 ----------AFTEPIGFSDKYSMPIGILGPVFYNARRIFALLDWVKAEFS--DTQRPGG 229

Query: 258 VRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYYSVKKSKD 303
             R   GR +A VN  +W +NLFG+LLP+++P++ + Y+S     D
Sbjct: 243 PLRLYGGRVIASVNTVMWFYNLFGLLLPVFLPRSCEIYFSGDNKDD 229

[Close]

BLAST of Carg23173 vs. TAIR 10
Match: AT1G27990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-23
Identity = 71/239 (29.71%), Postives = 117/239 (48.95%), Query Frame = 0


Query: 61  QLNALAVVVIFSASGMVCAEDLAFVVFSMMYMYFISRVAFPPL-AGAGEPTVFSQENRLL 120
           +L  +A +++FSASG+V   D+ F  F+ +Y+  +SR+AFP        P VF + ++L 
Sbjct: 47  ELQLVAFILVFSASGLVPILDMLFPAFASIYIIALSRLAFPSHGVSTASPEVF-RGSKLF 106

Query: 121 RLYGFFTIVVGFFLPIAYILEGFFEEDKEGIKAASPHVFLLASQDLTTTSVGESNETLYK 180
           RLY      +G FLP+AY+L GF   D   +++A+PH+FLL+ Q LT             
Sbjct: 107 RLYVISGTTIGLFLPLAYVLGGFARGDDHAVRSATPHLFLLSCQILTE------------ 166

Query: 181 DVETSPIDWRRKRGNVCQRERWPKRWRSFMEGVAGNNRFSTPIRVFVPVLYNARRVFTLT 240
                         NV                ++G + FS P+R  VP+LY   R+F + 
Sbjct: 167 --------------NV----------------ISGLSLFSPPVRALVPLLYTVWRIFVII 226

Query: 241 EWLRDEFAKEDKEYSGS---VRRQMIGRGLAVVNMAVWSFNLFGILLPLYVPKALKRYY 296
            W +D +  +    + +   V     GR LA+ N+  +  NL   L+P ++P+A ++Y+
Sbjct: 227 GWSKDVWFNKSLPINATPNVVTWFWFGRYLALANLGYFGVNLLCFLIPRFLPRAFEQYF 242

The following BLAST results are available for this feature:

BLAST of Carg23173 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016859.1	8.8e-167	100.00	hypothetical protein SDJN02_21970, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6579378.1	6.3e-133	85.43	hypothetical protein SDJN03_23826, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022973006.1	9.2e-132	84.77	uncharacterized protein LOC111471524 [Cucurbita maxima]	[more]
XP_023551347.1	2.9e-130	84.77	uncharacterized protein LOC111809194 [Cucurbita pepo subsp. pepo]	[more]
XP_022922241.1	5.0e-130	84.77	uncharacterized protein LOC111430282 [Cucurbita moschata]	[more]

BLAST of Carg23173 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7I0	4.4e-132	84.77	uncharacterized protein LOC111471524 OS=Cucurbita maxima OX=3661 GN=LOC111471524...	[more]
A0A6J1E3L1	2.4e-130	84.77	uncharacterized protein LOC111430282 OS=Cucurbita moschata OX=3662 GN=LOC1114302...	[more]
A0A5D3C472	1.9e-98	65.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AUS6	1.9e-98	65.89	uncharacterized protein LOC103482907 OS=Cucumis melo OX=3656 GN=LOC103482907 PE=...	[more]
A0A0A0KK26	3.7e-94	63.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G141070 PE=4 SV=1	[more]

BLAST of Carg23173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52420.1	5.3e-53	38.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G23920.1	5.9e-28	29.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G27990.1	1.5e-23	29.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..44
None	No IPR available	PANTHER	PTHR33829	OSJNBA0044M19.10 PROTEIN	coord: 1..165
None	No IPR available	PANTHER	PTHR33829:SF1	TRANSMEMBRANE PROTEIN	coord: 1..165 coord: 208..301
None	No IPR available	PANTHER	PTHR33829	OSJNBA0044M19.10 PROTEIN	coord: 208..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23173-RA	Carg23173-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane