Carg23151 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAACCCATCTTTCATCCATGGAAAAACAACCCCTTGGACTCGAGATCACCGAGCTTCGTCTCGGTCTCCCTGGCAATGGCCAAAAAAACGAGAAGAAACGAGCCTACGTTGCCATTGTAGGCGAAGATGAACCGACCAGGGATGATGTCGAGCGGAAGAATAACATGAATAAGGGACAAGTTGTAGGGTGGCCACCAGTGTGTTCGTATCGAAGAAAGAATAGTTTTGAAGAGAAAGAGTCGTTGCATGAGAATAAGAACTCAAAAATATACGTGAAGATTAGTATGGATGGAGCTCCATTTCTTCGTAAACTTGACTTGGGTTCTCATAATGGATATTCGGATCTTGCTCTCGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACGGGTAAATTTAGTGCTCTTTCTCGTATTTGTTTTATTTTCTCGTAAATTTAGTACATAAATATCATATCATAAAGTAATGGTATGTTTGTAAAATGACAGCAAAGACATCAAAGCATGTAAAAGGTTCCGATTACGTTCCGATTTACGAAGACAAAGACGGAGATTGGATGCTTGTGGGAGACGTCCCTTGGGAGTAAGTTCACGTTCTTTTTAGTACAACAAATATACATTATTCAAATTTGGACTTCAAATCTTTAGATCTACAATTAGATTTCCGTCCCTCATTTTTCTTTTTACCTAACTCAAAATTTCACTAACAATTTAAATTCATATTATTTCATTTGTTAAGGGTCGATCCGGTTTCGACCAACCAAAAATTTTGGGTTGATCGGGTTGGTGGCCCAAGCAACCCGAATAGACTTTATAACCGTAAACCCTACTCAACTTGAGGGTTCTTTTTTAAAAAATAAAATAAAAAATACTTATCAATAATATTTGTTATATTAATAACTAAAATCACATAAAATTTAAAAATAAAAAATTCATATGTTATAACGCATCATTAATATCAGTTACATACATCAAATATTCTTATTTTTCGTAAAAATTTTAAAAGTACGGTATGGTTGGGTTAGGTTATAACTTTATTATCAAGTTGGTCGGTTGAACTGACAAAAAAAAATATGTCAACCCCCAGACGTGCTCGAATTTTTTAGTTTTTCAAAAATTCGACTCAGTTCAAACCGAAAAAATTTAATATAGATATATACTAAAGTTTTTTTTTGTTGCTCTATATATATATGTATATATTTATTTATTTATTTGGTGTTACCGTTATTAACGGTGCTTAAAATTGAAGCCTCCTAGTCAAAGTCAAAGTCGATTTGATTTGATAGACACAAATTGGGATTAAGAATTAAGTTTTAATTAGACATTTAATTAGGAAGATAGTGACAGAGAGGGCAAAATGGTCTTTTCATATACCCTGCCCATTCATTAACTAACACGACATGATGCCGACAGGAAGCAGACCTTAATAATAGTGTCAGCCAGATTACAAAGTTGTCCCTGAATTCAATTCCCCTTGCCCCCTCCCGACATATCCCATGCCTATAATTTAAAATCAAAATAATAATCCAAATTTGCATTTAATTATGATAATATTTTTCCAGGATGTTTGCCAAATCGTGCAAGAGACTGAGGATCATGAAGAGATCGGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATAAGTTTAAGAAATATGTTTTCCTTCACTTTTATGACTTTATTTAGCTTCAAAATAGACGTAACAGTAATTCCCTTAATTAATATTAATTGTTCAGTTTTATGGTTACAATGTCCAGGTAGCTTTATATGAAGTTTGTTTGGGTATTTTTTGTTTTAATTCTTCACTTATATAGTATTATAGTTTGTTGAGTTATATTAAGG AACAACCCATCTTTCATCCATGGAAAAACAACCCCTTGGACTCGAGATCACCGAGCTTCGTCTCGGTCTCCCTGGCAATGGCCAAAAAAACGAGAAGAAACGAGCCTACGTTGCCATTGTAGGCGAAGATGAACCGACCAGGGATGATGTCGAGCGGAAGAATAACATGAATAAGGGACAAGTTGTAGGGTGGCCACCAGTGTGTTCGTATCGAAGAAAGAATAGTTTTGAAGAGAAAGAGTCGTTGCATGAGAATAAGAACTCAAAAATATACGTGAAGATTAGTATGGATGGAGCTCCATTTCTTCGTAAACTTGACTTGGGTTCTCATAATGGATATTCGGATCTTGCTCTCGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACGGCAAAGACATCAAAGCATGTAAAAGGTTCCGATTACGTTCCGATTTACGAAGACAAAGACGGAGATTGGATGCTTGTGGGAGACGTCCCTTGGGAGATGTTTGCCAAATCGTGCAAGAGACTGAGGATCATGAAGAGATCGGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATAAGTTTAAGAAATATGTTTTCCTTCACTTTTATGACTTTATTTAGCTTCAAAATAGACGTAACAGTAATTCCCTTAATTAATATTAATTGTTCAGTTTTATGGTTACAATGTCCAGGTAGCTTTATATGAAGTTTGTTTGGGTATTTTTTGTTTTAATTCTTCACTTATATAGTATTATAGTTTGTTGAGTTATATTAAGG ATGGAAAAACAACCCCTTGGACTCGAGATCACCGAGCTTCGTCTCGGTCTCCCTGGCAATGGCCAAAAAAACGAGAAGAAACGAGCCTACGTTGCCATTGTAGGCGAAGATGAACCGACCAGGGATGATGTCGAGCGGAAGAATAACATGAATAAGGGACAAGTTGTAGGGTGGCCACCAGTGTGTTCGTATCGAAGAAAGAATAGTTTTGAAGAGAAAGAGTCGTTGCATGAGAATAAGAACTCAAAAATATACGTGAAGATTAGTATGGATGGAGCTCCATTTCTTCGTAAACTTGACTTGGGTTCTCATAATGGATATTCGGATCTTGCTCTCGCTCTTGAAAAGCTCTTTGCTTGCTTTGGAACGGCAAAGACATCAAAGCATGTAAAAGGTTCCGATTACGTTCCGATTTACGAAGACAAAGACGGAGATTGGATGCTTGTGGGAGACGTCCCTTGGGAGATGTTTGCCAAATCGTGCAAGAGACTGAGGATCATGAAGAGATCGGAGGCCAAAGGGTTCGGCCTGCAATTTAAGGATCTATAA MEKQPLGLEITELRLGLPGNGQKNEKKRAYVAIVGEDEPTRDDVERKNNMNKGQVVGWPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKLFACFGTAKTSKHVKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGLQFKDL Homology
BLAST of Carg23151 vs. NCBI nr
Match: KAG7025749.1 (Auxin-induced protein AUX22 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 379.4 bits (973), Expect = 1.7e-101 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg23151 vs. NCBI nr
Match: KAG6593402.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100 Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Carg23151 vs. NCBI nr
Match: XP_023004863.1 (auxin-induced protein AUX22-like [Cucurbita maxima]) HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98 Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0
BLAST of Carg23151 vs. NCBI nr
Match: XP_023514526.1 (auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365.9 bits (938), Expect = 2.0e-97 Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Carg23151 vs. NCBI nr
Match: KAG7014105.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 321.2 bits (822), Expect = 5.6e-84 Identity = 156/183 (85.25%), Postives = 165/183 (90.16%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.1e-61 Identity = 120/190 (63.16%), Postives = 140/190 (73.68%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 7.2e-58 Identity = 116/191 (60.73%), Postives = 138/191 (72.25%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 7.2e-58 Identity = 112/188 (59.57%), Postives = 135/188 (71.81%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55 Identity = 111/181 (61.33%), Postives = 131/181 (72.38%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy Swiss-Prot
Match: O24409 (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=2) HSP 1 Score: 194.5 bits (493), Expect = 1.0e-48 Identity = 108/194 (55.67%), Postives = 126/194 (64.95%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy TrEMBL
Match: A0A6J1L0Q4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.1e-98 Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy TrEMBL
Match: A0A6J1GPU1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84 Identity = 155/183 (84.70%), Postives = 165/183 (90.16%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy TrEMBL
Match: A0A6J1JTD7 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82 Identity = 153/183 (83.61%), Postives = 163/183 (89.07%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy TrEMBL
Match: A0A0A0KC02 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76 Identity = 152/194 (78.35%), Postives = 164/194 (84.54%), Query Frame = 0
BLAST of Carg23151 vs. ExPASy TrEMBL
Match: A0A1S3CF19 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.8e-73 Identity = 150/194 (77.32%), Postives = 161/194 (82.99%), Query Frame = 0
BLAST of Carg23151 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 ) HSP 1 Score: 194.5 bits (493), Expect = 7.4e-50 Identity = 108/194 (55.67%), Postives = 126/194 (64.95%), Query Frame = 0
BLAST of Carg23151 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 ) HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44 Identity = 98/197 (49.75%), Postives = 121/197 (61.42%), Query Frame = 0
BLAST of Carg23151 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 ) HSP 1 Score: 169.1 bits (427), Expect = 3.3e-42 Identity = 100/180 (55.56%), Postives = 115/180 (63.89%), Query Frame = 0
BLAST of Carg23151 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 168.3 bits (425), Expect = 5.7e-42 Identity = 91/183 (49.73%), Postives = 114/183 (62.30%), Query Frame = 0
BLAST of Carg23151 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein ) HSP 1 Score: 161.0 bits (406), Expect = 9.0e-40 Identity = 88/177 (49.72%), Postives = 112/177 (63.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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