Carg23141 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg23141
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSodium channel protein type 10 subunit alpha like
LocationCarg_Chr08: 3315025 .. 3317202 (-)
RNA-Seq ExpressionCarg23141
SyntenyCarg23141
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTACTATTCTTTGCTGGTGTTTTTCGTGCTTAATTCATTTATTGGACTGAACTGCTCGTGTTAAGGCTTAGAAATTTTAGTGCATAGAGCTTGGTTATGTGTTTACTTATTTCTATTTCGTTTTTCCATGAACGGTTGTGGAGTTTGCGTTATCCTTATCCCTATAGCATGCCTTCATAACCGAAAATAAAAATTATTAGCTCCTGAATTTTGCTCGGATTGTGCTATACTGCTAGTGGTCCTTATTTCTCGATTGCTACAACTAATAACAGTGTTTTTTATCCATTTGAGTTCTGGTTGTTTAGAAGCTAATCATCCATAAATATTTTTCGTTTTTTTAGTCATCTGGAAATTTGTTCCGCTAGGTCCGCGGATACATATGTGCTTAGCAATTATATCTAATTTTCTCGTGATTTATTTTGAAAGTTTGTTAGATAGAAAGTTCTGCTCAATACGTCATAGATATGTCGAAATCTCAACGGAAAAGAAATAATGGTGTTTGGAGTGTGCGATTCATTAGGTTCAACTACTCCGTAATCATTTTTCATTAACCGCGTCAGCGAAGTTCAATTGTCAATTTTAATGAGCAATTCGTAAACATATCTGAGTATAGATGTTTACCTGCAAATATAAAGCCATTTCCCCCTCCATAACAACAGTTATATATATTTGCTTTCGTGCAAGAATCATAGCGATTTCTTAGGATTCAACTTTCCGATTGTTAGATGAAGTGTCTTCTTCTTTTCTAGCCCCTTATCGTATAGCTGCTTGGCTTGGATAACTTAGGCCTTTGATAATCATTTGGCTTCCGGAAATTGTGTTTGATTTCTTATTAATTCTCTACTATGAGTTTCATCTTTCTTAACCAAACACTTAAAGTTTTAGCCAAATTCCAAAAACAGTAGCATGTTTTAATTTTTTTTTTTTTTAAGTTTTCAAAACTTGACTGGTTTTTTAAAGCATAGATAACAAAATAAAGGAATTCATAGGCCAAAGTAATATTTATAGACTTAAATTTCAAAAATCAAACTGTTATCAAACAAGATTTTAATTTTTCTTTCAATTCATTTTTTGACACTCCCTTGGCCAAATATTAATTTTGGTTCATGATGCCTAACATGTGATCATTTAGTATGAAATAGGATGAATTGGAAAGGATATTCCGGTGATTTGAGACGTATCTAGGTTTTCTACCTTAAATTAGCTCTTTCCAAACTTCTTTTTTGTAACTATAGCTTCTTGATTATAGCCAATTGGAGTGCTTTTCTGCAGTTTTCTTGCATTCTGGGAGATTGTTAAGCTTCATCGTCTGTATTAGATTAAAACTGTTGGTGTTGGTAATACTCTGAAATTCTACCGAGTCATTATATATTTTTGATGTTAGAACTTAGTACTAATTTTCTTGCATGTAATTCATATTGTAACTTGTTTGGTTTGAATTGCTTTGATCATGCTGAGGTTCTTTGATGTGGATGAACTATGTTTCCTTATTTCTCTTCGTATTATAATTTGAGCAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAAAGCATTCTTTTGTAAAGGATTGCAGGTTAATATAAATAGTGTTAAGCTGCTTGATTTTAACTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTCAATTAGATGTTGATACCAAAAGTAAACTGTCATGGAAAGCCCTATTCTGTATCATATTCTTATCAAGTGTCTTAAAAATTTCCTGAATCCTTCTCTAATTATTAACCTTTTTTTCTTTTTTGAACCTTTTCTTGATTTGTGC

mRNA sequence

ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAAAGCATTCTTTTGTAAAGGATTGCAGGTTAATATAAATAGTGTTAAGCTGCTTGATTTTAACTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTCAATTAGATGTTGATACCAAAAGTAAACTGTCATGGAAAGCCCTATTCTGTATCATATTCTTATCAAGTGTCTTAAAAATTTCCTGAATCCTTCTCTAATTATTAACCTTTTTTTCTTTTTTGAACCTTTTCTTGATTTGTGC

Coding sequence (CDS)

ATGGCAGCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACCGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCCTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGCCGTTCATCTCTCTTGCTCTCTTCTAATCCCTGTGCTAAATCCGCCGTTTGTACAGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAG

Protein sequence

MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Homology
[Close]
BLAST of Carg23141 vs. NCBI nr
Match: KAG6593392.1 (hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025739.1 hypothetical protein SDJN02_12237, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.2 bits (674), Expect = 5.8e-67
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60
           MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS
Sbjct: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120
           AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK
Sbjct: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120

Query: 121 NRPNKGSRFRR 132
           NRPNKGSRFRR
Sbjct: 121 NRPNKGSRFRR 131

[Close]
BLAST of Carg23141 vs. NCBI nr
Match: XP_022959617.1 (uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 1.4e-65
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60
           MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNP AKS
Sbjct: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPRAKS 60

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120
           AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK
Sbjct: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120

Query: 121 NRPNKGSRFRR 132
           NRPNKGSRFRR
Sbjct: 121 NRPNKGSRFRR 131

[Close]
BLAST of Carg23141 vs. NCBI nr
Match: XP_023513765.1 (uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 5.5e-65
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0 

Query: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60
           MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS
Sbjct: 1   MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120
           AVC AAVRPPPDSDPPPDEDPIRLKGF AIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK
Sbjct: 61  AVCPAAVRPPPDSDPPPDEDPIRLKGFTAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120

Query: 121 NRPNKGSRFRR 132
           NRPNKGSRFRR
Sbjct: 121 NRPNKGSRFRR 131

[Close]
BLAST of Carg23141 vs. NCBI nr
Match: XP_023004358.1 (uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima])

HSP 1 Score: 257.3 bits (656), Expect = 7.1e-65
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0 

Query: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60
           MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NPCAKS
Sbjct: 1   MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKS 60

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120
           AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK
Sbjct: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120

Query: 121 NRPNKGSRFRR 132
           NRPNKGSRFRR
Sbjct: 121 NRPNKGSRFRR 131

[Close]
BLAST of Carg23141 vs. NCBI nr
Match: XP_022145821.1 (uncharacterized protein LOC111015178 [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-44
Identity = 93/119 (78.15%), Postives = 99/119 (83.19%), Query Frame = 0 

Query: 13  YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPD 72
           YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C+AAVRPPPD
Sbjct: 5   YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPD 64

Query: 73  SDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 132
           S PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 65  SGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 123

[Close]
BLAST of Carg23141 vs. ExPASy TrEMBL
Match: A0A6J1H516 (uncharacterized protein LOC111460643 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460643 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.0e-66
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60
           MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNP AKS
Sbjct: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPRAKS 60

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120
           AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK
Sbjct: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120

Query: 121 NRPNKGSRFRR 132
           NRPNKGSRFRR
Sbjct: 121 NRPNKGSRFRR 131

[Close]
BLAST of Carg23141 vs. ExPASy TrEMBL
Match: A0A6J1KZ93 (uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497700 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 128/131 (97.71%), Postives = 129/131 (98.47%), Query Frame = 0 

Query: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60
           MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NPCAKS
Sbjct: 1   MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKS 60

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120
           AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK
Sbjct: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK 120

Query: 121 NRPNKGSRFRR 132
           NRPNKGSRFRR
Sbjct: 121 NRPNKGSRFRR 131

[Close]
BLAST of Carg23141 vs. ExPASy TrEMBL
Match: A0A6J1CXJ1 (uncharacterized protein LOC111015178 OS=Momordica charantia OX=3673 GN=LOC111015178 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 93/119 (78.15%), Postives = 99/119 (83.19%), Query Frame = 0 

Query: 13  YHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVRPPPD 72
           YH + ++TA  IA+PL S F  PPEI FS  H RRSSLLLSSNP A SA C+AAVRPPPD
Sbjct: 5   YHSTHSLTASTIAVPLCSRFRVPPEICFSSHHRRRSSLLLSSNPYASSAACSAAVRPPPD 64

Query: 73  SDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 132
           S PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 65  SGPPPDKDPIRAKGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 123

[Close]
BLAST of Carg23141 vs. ExPASy TrEMBL
Match: A0A1S3CE06 (uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.9e-40
Identity = 88/123 (71.54%), Postives = 98/123 (79.67%), Query Frame = 0 

Query: 9   SNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAVCTAAVR 68
           S +L+  S +V A +IA+PL S+FH   +I FSP   R S L  SSN  AKS VC+AAVR
Sbjct: 3   STSLHRSSHSVAASSIALPLCSTFHFRSKICFSPPRRRLSPLFFSSNSYAKSVVCSAAVR 62

Query: 69  PPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSR 128
           PPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFWMSLFFWTSALDGKNRPNKGSR
Sbjct: 63  PPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGKNRPNKGSR 122

Query: 129 FRR 132
           FRR
Sbjct: 123 FRR 125

[Close]
BLAST of Carg23141 vs. ExPASy TrEMBL
Match: A0A0A0K8T0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.3e-39
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 0 

Query: 9   SNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRR-SSLLLSSNPCAKSAVCTAAV 68
           S +L+  S++V A +IA+PL S+FH   EI FS LH RR S L  SSN  A+S VC+AAV
Sbjct: 5   STSLHRSSQSVAASSIALPLCSTFHLRSEICFS-LHRRRLSPLFFSSNSYAESVVCSAAV 64

Query: 69  RPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGS 128
           RPPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFWMSLFFWTSALDG+NRPNKGS
Sbjct: 65  RPPPDSDPPPEEDPVRLTGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGRNRPNKGS 124

Query: 129 RFRR 132
           RFRR
Sbjct: 125 RFRR 127

[Close]
BLAST of Carg23141 vs. TAIR 10
Match: AT3G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 6.1e-14
Identity = 49/132 (37.12%), Postives = 66/132 (50.00%), Query Frame = 0 

Query: 1   MAAPSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKS 60
           MA  + +TS  LYH S           + S F  P  +      HRR+++LL+S    + 
Sbjct: 3   MALSNPTTSTNLYHYS-----------ILSPFSPPYHL------HRRNTVLLASPRRLRR 62

Query: 61  AVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALD-- 120
                    PP  DPPP ED  +L+G     ++  DRV+IF AV FWM LFFW +  D  
Sbjct: 63  LAVAGGPPSPPGPDPPPPEDTTQLEGLVGAVTRVQDRVKIFLAVFFWMFLFFWVTVTDGT 117

Query: 121 GKNRPNKGSRFR 131
           GK +  KGSRF+
Sbjct: 123 GKGKGKKGSRFK 117

[Close]
BLAST of Carg23141 vs. TAIR 10
Match: AT1G52550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast hits to 51 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11
Identity = 47/133 (35.34%), Postives = 64/133 (48.12%), Query Frame = 0 

Query: 3   APSLSTSNALYHPSRAVTAPAIAIPLFSSFHAPPEISFSPLHHRRSSLLLSSNPCAKSAV 62
           A + S+SN   H  R    P  +   FS F +      SPL  +   L+ +  P  + AV
Sbjct: 6   ANTTSSSNLYLHRCRK-NHPLPSPSFFSPFRS------SPLPSQTLFLVPTPKPVRRIAV 65

Query: 63  CTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGK-- 122
                  PP  DPPP ++   L     + S   DRV+IF +VL W+SLFFW SAL G+  
Sbjct: 66  APLGPPTPPSPDPPPPKNTTELTSLVGVASMIQDRVKIFLSVLIWISLFFWASALQGRGS 125

Query: 123 ---NRPNKGSRFR 131
               +  KGSRF+
Sbjct: 126 KGNGKGKKGSRFK 131

The following BLAST results are available for this feature:
BLAST of Carg23141 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593392.15.8e-67100.00hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022959617.11.4e-6599.24uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata][more]
XP_023513765.15.5e-6597.71uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023004358.17.1e-6597.71uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima][more]
XP_022145821.12.4e-4478.15uncharacterized protein LOC111015178 [Momordica charantia][more]
BLAST of Carg23141 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg23141 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H5167.0e-6699.24uncharacterized protein LOC111460643 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KZ933.5e-6597.71uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1CXJ11.2e-4478.15uncharacterized protein LOC111015178 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A1S3CE063.9e-4071.54uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=... [more]
A0A0A0K8T04.3e-3971.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1[more]
BLAST of Carg23141 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G15780.16.1e-1437.12unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G52550.13.7e-1135.34unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37706TRANSMEMBRANE PROTEINcoord: 27..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23141-RACarg23141-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane