Carg23135 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23135
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	VQ motif-containing protein 11-like
Location	Carg_Chr08: 3282482 .. 3282901 (+)
RNA-Seq Expression	Carg23135
Synteny	Carg23135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGCCGCCACCACCGTGCATTCCTCCACCACGACCTTCGTCGAAGCCGACCCATCATCATTCCGAGCAATAGTTCAGAAGCTAACCGGAGCACCTAACGCCCCATCAGCGTCGTTTCGTCTGCAGGAGCGGCGGCGGAGTAGCAAGAAGCTGGAGCTGGAGCTGAACGGCGGCGATGGTTTGACAGGGATCGGAATTGGAATCGAAATGGTATCGCCGGTGTCGACTTTGGATTTTGTAGCACGTGGGAATCCTTGTGAAGAGGAAGAGAAGGCCATCGCCGGAAAAGGGTTTTATTTGCACCCAAGTCCGATCAGCCCTCCCGGAGGATCCCAGCCGCCTCGGCTTTTGCCCCTGTTTCCTCTTTCTTCTCCAAGGGACTGTAATTTCAGAAACCATTCTGTTTCTTCTTAA

mRNA sequence

ATGGCCGCCGCCGCCACCACCGTGCATTCCTCCACCACGACCTTCGTCGAAGCCGACCCATCATCATTCCGAGCAATAGTTCAGAAGCTAACCGGAGCACCTAACGCCCCATCAGCGTCGTTTCGTCTGCAGGAGCGGCGGCGGAGTAGCAAGAAGCTGGAGCTGGAGCTGAACGGCGGCGATGGTTTGACAGGGATCGGAATTGGAATCGAAATGGTATCGCCGGTGTCGACTTTGGATTTTGTAGCACGTGGGAATCCTTGTGAAGAGGAAGAGAAGGCCATCGCCGGAAAAGGGTTTTATTTGCACCCAAGTCCGATCAGCCCTCCCGGAGGATCCCAGCCGCCTCGGCTTTTGCCCCTGTTTCCTCTTTCTTCTCCAAGGGACTGTAATTTCAGAAACCATTCTGTTTCTTCTTAA

Coding sequence (CDS)

ATGGCCGCCGCCGCCACCACCGTGCATTCCTCCACCACGACCTTCGTCGAAGCCGACCCATCATCATTCCGAGCAATAGTTCAGAAGCTAACCGGAGCACCTAACGCCCCATCAGCGTCGTTTCGTCTGCAGGAGCGGCGGCGGAGTAGCAAGAAGCTGGAGCTGGAGCTGAACGGCGGCGATGGTTTGACAGGGATCGGAATTGGAATCGAAATGGTATCGCCGGTGTCGACTTTGGATTTTGTAGCACGTGGGAATCCTTGTGAAGAGGAAGAGAAGGCCATCGCCGGAAAAGGGTTTTATTTGCACCCAAGTCCGATCAGCCCTCCCGGAGGATCCCAGCCGCCTCGGCTTTTGCCCCTGTTTCCTCTTTCTTCTCCAAGGGACTGTAATTTCAGAAACCATTCTGTTTCTTCTTAA

Protein sequence

MAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSPRDCNFRNHSVSS

Homology

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BLAST of Carg23135 vs. NCBI nr
Match: KAG6593385.1 (VQ motif-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025733.1 VQ motif-containing protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGG 60
           MAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGG
Sbjct: 1   MAAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGG 60

Query: 61  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 120
           DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP
Sbjct: 61  DGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLP 120

Query: 121 LFPLSSPRDCNFRNHSVSS 140
           LFPLSSPRDCNFRNHSVSS
Sbjct: 121 LFPLSSPRDCNFRNHSVSS 139

[Close]

BLAST of Carg23135 vs. NCBI nr
Match: XP_023514799.1 (VQ motif-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 5.1e-69
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 2   AAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGD 61
           AAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPS SFRLQERRRSSKKLELELNGGD
Sbjct: 3   AAAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSPSFRLQERRRSSKKLELELNGGD 62

Query: 62  GLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPL 121
           GLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPL
Sbjct: 63  GLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPL 122

Query: 122 FPLSSPRDCNFRNHSVSS 140
           FPLSSPRDCNFRNHSVSS
Sbjct: 123 FPLSSPRDCNFRNHSVSS 140

[Close]

BLAST of Carg23135 vs. NCBI nr
Match: XP_022960160.1 (VQ motif-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 3.3e-68
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MAAAAT--TVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELN 60
           MAA AT  TVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELN
Sbjct: 1   MAATATAATVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELN 60

Query: 61  GGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRL 120
           GGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRL
Sbjct: 61  GGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRL 120

Query: 121 LPLFPLSSPRDCNFRNHSVSS 140
           LPLFPLSSPRDCNFRNHSVSS
Sbjct: 121 LPLFPLSSPRDCNFRNHSVSS 141

[Close]

BLAST of Carg23135 vs. NCBI nr
Match: XP_023004337.1 (VQ motif-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 265.4 bits (677), Expect = 2.8e-67
Identity = 133/137 (97.08%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 3   AAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGDG 62
           A A TVHSSTTTFVEADPSSFRAIVQKLTGAP+APSAS+RLQERRRSSKKLELELNGGDG
Sbjct: 9   ATAATVHSSTTTFVEADPSSFRAIVQKLTGAPDAPSASYRLQERRRSSKKLELELNGGDG 68

Query: 63  LTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLF 122
           LTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLF
Sbjct: 69  LTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLF 128

Query: 123 PLSSPRDCNFRNHSVSS 140
           PLSSPRDCNFRNHSVSS
Sbjct: 129 PLSSPRDCNFRNHSVSS 145

[Close]

BLAST of Carg23135 vs. NCBI nr
Match: XP_038897860.1 (VQ motif-containing protein 11-like [Benincasa hispida])

HSP 1 Score: 207.2 bits (526), Expect = 9.0e-50
Identity = 106/132 (80.30%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 8   VHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGDGLTGIG 67
           VHS+TTTFVEADPS+FRAIVQKLTGAPN P A+FRLQERRRSSKKLELELN G    G  
Sbjct: 10  VHSATTTFVEADPSTFRAIVQKLTGAPNRPPAAFRLQERRRSSKKLELELNSGYTAAG-- 69

Query: 68  IGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 127
            GI MVSPVSTL+F+ RG+PCEEEE+AIA KGFYLHPSPIS PGGS PP LLPLFPLSSP
Sbjct: 70  -GIGMVSPVSTLEFIGRGSPCEEEERAIAEKGFYLHPSPISTPGGSDPPHLLPLFPLSSP 129

Query: 128 RDCNFRNHSVSS 140
            +CN RNHSVSS
Sbjct: 130 SNCNNRNHSVSS 138

[Close]

BLAST of Carg23135 vs. ExPASy Swiss-Prot
Match: Q9M8L3 (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.9e-20
Identity = 75/160 (46.88%), Postives = 88/160 (55.00%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGAPNAPSAS--------------------FRLQERRRSSKK 72
           T FV+ADPS+FR IVQKLTGAP   S+S                    F+L ERR+SSKK
Sbjct: 15  TMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSSKK 74

Query: 73  LELELNG----GDGLTGIGIGIEMVSPVSTLD-FVAR-----------GNPCEEEEKAIA 132
           +EL++N      D  +    G  +VSPVS LD F AR             P +EE+KAIA
Sbjct: 75  MELKVNNITNPNDAFSHFHRGF-LVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKAIA 134

Query: 133 GKGFYLHPSPISPPGGSQP-PRLLPLFPLSSPRDCNFRNH 136
            KGFY  PSP S   GS+P P LLPLFPL SP   N R H
Sbjct: 135 EKGFYFLPSPRS---GSEPAPELLPLFPLRSPNGTNHRIH 170

[Close]

BLAST of Carg23135 vs. ExPASy Swiss-Prot
Match: Q9LDZ1 (VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.5e-10
Identity = 60/179 (33.52%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGA-----------PNAPSASFRL--------QERRRSSKKL 72
           TTFV+AD SSF+ +VQ LTG+           P  PS             Q ++ S  KL
Sbjct: 37  TTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKHSGNKL 96

Query: 73  -ELELNGGDG-------------LTGIGIG---------------------IEMVSPVST 129
            E   +GG               + G G G                     + + SPV+ 
Sbjct: 97  YERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSPVTP 156

[Close]

BLAST of Carg23135 vs. ExPASy Swiss-Prot
Match: Q5M750 (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 55/182 (30.22%), Postives = 74/182 (40.66%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGAPNAP----------------------------------- 72
           TTFV+AD SSF+ +VQ LTG+   P                                   
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 73  ------SASFRLQERRRSSKKLEL-------------------ELNGGDGLTGIGIGIEM 129
                 ++ FRL ERR S K L++                   E+     L    + +  
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

[Close]

BLAST of Carg23135 vs. ExPASy Swiss-Prot
Match: Q9FNP0 (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 7   TVHSSTTTFVEADPSSFRAIVQKLTG------APNAPSASF-----------RLQERRRS 66
           T     TTFV+ D ++FR IVQ+LTG      A   P A+            +L ERR+ 
Sbjct: 11  TTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKLHERRQC 70

Query: 67  SK-KLEL-------ELNGGDGLTGIGIGIEMVSPVSTLD------FVARGNP------CE 126
            + KLE+       +  G    +  G    + SPV T         +  G P       E
Sbjct: 71  MRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPDSCTTNIE 130

Query: 127 EEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFPLSSP 128
           EEEKAI  + FYLHPSP S PG ++ P LL LFPL+SP
Sbjct: 131 EEEKAIKERRFYLHPSPRSKPGYTE-PELLTLFPLTSP 167

[Close]

BLAST of Carg23135 vs. ExPASy Swiss-Prot
Match: Q9FHZ3 (VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-08
Identity = 61/193 (31.61%), Postives = 77/193 (39.90%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGAP---------NAPSA-------------------SFRLQ 72
           TTFV+AD S+F+ +VQ LTG+           APS                    SF+L 
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 73  ERRRSSKKL---------ELELNGGDGLTGIGIGIE------------------MVSPVS 128
           ERR+++  +          L L     L   G                      ++SP S
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSP-S 168

[Close]

BLAST of Carg23135 vs. ExPASy TrEMBL
Match: A0A6J1H8B6 (VQ motif-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111460985 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-68
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MAAAAT--TVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELN 60
           MAA AT  TVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELN
Sbjct: 1   MAATATAATVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELN 60

Query: 61  GGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRL 120
           GGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRL
Sbjct: 61  GGDGLTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRL 120

Query: 121 LPLFPLSSPRDCNFRNHSVSS 140
           LPLFPLSSPRDCNFRNHSVSS
Sbjct: 121 LPLFPLSSPRDCNFRNHSVSS 141

[Close]

BLAST of Carg23135 vs. ExPASy TrEMBL
Match: A0A6J1KQ55 (VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111497685 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 133/137 (97.08%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 3   AAATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGDG 62
           A A TVHSSTTTFVEADPSSFRAIVQKLTGAP+APSAS+RLQERRRSSKKLELELNGGDG
Sbjct: 9   ATAATVHSSTTTFVEADPSSFRAIVQKLTGAPDAPSASYRLQERRRSSKKLELELNGGDG 68

Query: 63  LTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLF 122
           LTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLF
Sbjct: 69  LTGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLF 128

Query: 123 PLSSPRDCNFRNHSVSS 140
           PLSSPRDCNFRNHSVSS
Sbjct: 129 PLSSPRDCNFRNHSVSS 145

[Close]

BLAST of Carg23135 vs. ExPASy TrEMBL
Match: A0A5D3CGZ5 (VQ motif-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001850 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.8e-49
Identity = 104/136 (76.47%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 4   AATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGDGL 63
           A   +HS+TTTFVEADPS+FR+IVQKLTGAPN P A++RLQERRRSSKKLELELN G  +
Sbjct: 6   ATAVIHSATTTFVEADPSTFRSIVQKLTGAPNHPPAAYRLQERRRSSKKLELELNTGYTV 65

Query: 64  TGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFP 123
            G GIGI MVSPVSTLDF+  G+PCEEEE+AIA KG+YLHPSPI+ PGGS PP LLPLFP
Sbjct: 66  AG-GIGIGMVSPVSTLDFMGCGSPCEEEERAIAEKGYYLHPSPINTPGGSDPPHLLPLFP 125

Query: 124 LSSPRDCNFRNHSVSS 140
           LSSP DCN RN+SVSS
Sbjct: 126 LSSPSDCNNRNYSVSS 140

[Close]

BLAST of Carg23135 vs. ExPASy TrEMBL
Match: A0A1S3CF34 (VQ motif-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103500018 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.8e-49
Identity = 104/136 (76.47%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 4   AATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGDGL 63
           A   +HS+TTTFVEADPS+FR+IVQKLTGAPN P A++RLQERRRSSKKLELELN G  +
Sbjct: 6   ATAVIHSATTTFVEADPSTFRSIVQKLTGAPNHPPAAYRLQERRRSSKKLELELNTGYTV 65

Query: 64  TGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFP 123
            G GIGI MVSPVSTLDF+  G+PCEEEE+AIA KG+YLHPSPI+ PGGS PP LLPLFP
Sbjct: 66  AG-GIGIGMVSPVSTLDFMGCGSPCEEEERAIAEKGYYLHPSPINTPGGSDPPHLLPLFP 125

Query: 124 LSSPRDCNFRNHSVSS 140
           LSSP DCN RN+SVSS
Sbjct: 126 LSSPSDCNNRNYSVSS 140

[Close]

BLAST of Carg23135 vs. ExPASy TrEMBL
Match: A0A0A0K6W6 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432350 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.5e-47
Identity = 103/136 (75.74%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 4   AATTVHSSTTTFVEADPSSFRAIVQKLTGAPNAPSASFRLQERRRSSKKLELELNGGDGL 63
           A   VHSSTTTFVEADPS+FR+IVQKLTGAP+ P A++RLQERRRSSKKLELELN G   
Sbjct: 6   ATAVVHSSTTTFVEADPSTFRSIVQKLTGAPHHPPAAYRLQERRRSSKKLELELNTGYTT 65

Query: 64  TGIGIGIEMVSPVSTLDFVARGNPCEEEEKAIAGKGFYLHPSPISPPGGSQPPRLLPLFP 123
           TG GIG  MVSPVSTLDF+  G+PCEEEE+AIA KG+YLHPSPI+ PGGS PP LLPLFP
Sbjct: 66  TG-GIGNGMVSPVSTLDFMGCGSPCEEEERAIAEKGYYLHPSPINTPGGSDPPHLLPLFP 125

Query: 124 LSSPRDCNFRNHSVSS 140
           LSSP +CN RN+ VSS
Sbjct: 126 LSSPSNCNNRNYYVSS 140

[Close]

BLAST of Carg23135 vs. TAIR 10
Match: AT1G80450.1 (VQ motif-containing protein )

HSP 1 Score: 98.6 bits (244), Expect = 4.2e-21
Identity = 75/160 (46.88%), Postives = 88/160 (55.00%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGAPNAPSAS--------------------FRLQERRRSSKK 72
           T FV+ADPS+FR IVQKLTGAP   S+S                    F+L ERR+SSKK
Sbjct: 15  TMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSSKK 74

Query: 73  LELELNG----GDGLTGIGIGIEMVSPVSTLD-FVAR-----------GNPCEEEEKAIA 132
           +EL++N      D  +    G  +VSPVS LD F AR             P +EE+KAIA
Sbjct: 75  MELKVNNITNPNDAFSHFHRGF-LVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKAIA 134

Query: 133 GKGFYLHPSPISPPGGSQP-PRLLPLFPLSSPRDCNFRNH 136
            KGFY  PSP S   GS+P P LLPLFPL SP   N R H
Sbjct: 135 EKGFYFLPSPRS---GSEPAPELLPLFPLRSPNGTNHRIH 170

[Close]

BLAST of Carg23135 vs. TAIR 10
Match: AT3G15300.1 (VQ motif-containing protein )

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-11
Identity = 60/179 (33.52%), Postives = 77/179 (43.02%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGA-----------PNAPSASFRL--------QERRRSSKKL 72
           TTFV+AD SSF+ +VQ LTG+           P  PS             Q ++ S  KL
Sbjct: 37  TTFVQADSSSFKQVVQMLTGSSSPRSPDSPRPPTTPSGKGNFVIPPIKTAQPKKHSGNKL 96

Query: 73  -ELELNGGDG-------------LTGIGIG---------------------IEMVSPVST 129
            E   +GG               + G G G                     + + SPV+ 
Sbjct: 97  YERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLDFPKLALNSPVTP 156

[Close]

BLAST of Carg23135 vs. TAIR 10
Match: AT5G08480.1 (VQ motif-containing protein )

HSP 1 Score: 62.0 bits (149), Expect = 4.4e-10
Identity = 51/141 (36.17%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 7   TVHSSTTTFVEADPSSFRAIVQKLTG---------APNAPSASFRLQER-------RRSS 66
           T     TTFV+ D ++FR IVQ+LTG          P A      +Q+R       RR  
Sbjct: 11  TTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSKLHERRQC 70

Query: 67  KKLELELNGGDGLTGIGIGIEMVSPVSTLDFVARGNPC----EEEEKAIAGKGFYLHPSP 126
            + +LE+              +  P+S        + C    EEEEKAI  + FYLHPSP
Sbjct: 71  MRPKLEI--------------VKPPLSFKPTEGEPDSCTTNIEEEEKAIKERRFYLHPSP 130

Query: 127 ISPPGGSQPPRLLPLFPLSSP 128
            S PG ++ P LL LFPL+SP
Sbjct: 131 RSKPGYTE-PELLTLFPLTSP 136

[Close]

BLAST of Carg23135 vs. TAIR 10
Match: AT1G28280.1 (VQ motif-containing protein )

HSP 1 Score: 61.2 bits (147), Expect = 7.4e-10
Identity = 55/182 (30.22%), Postives = 74/182 (40.66%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGAPNAP----------------------------------- 72
           TTFV+AD SSF+ +VQ LTG+   P                                   
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 73  ------SASFRLQERRRSSKKLEL-------------------ELNGGDGLTGIGIGIEM 129
                 ++ FRL ERR S K L++                   E+     L    + +  
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

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BLAST of Carg23135 vs. TAIR 10
Match: AT1G28280.2 (VQ motif-containing protein )

HSP 1 Score: 61.2 bits (147), Expect = 7.4e-10
Identity = 55/182 (30.22%), Postives = 74/182 (40.66%), Query Frame = 0


Query: 13  TTFVEADPSSFRAIVQKLTGAPNAP----------------------------------- 72
           TTFV+AD SSF+ +VQ LTG+   P                                   
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 73  ------SASFRLQERRRSSKKLEL-------------------ELNGGDGLTGIGIGIEM 129
                 ++ FRL ERR S K L++                   E+     L    + +  
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

The following BLAST results are available for this feature:

BLAST of Carg23135 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593385.1	3.5e-70	100.00	VQ motif-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_023514799.1	5.1e-69	99.28	VQ motif-containing protein 11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960160.1	3.3e-68	97.87	VQ motif-containing protein 11-like [Cucurbita moschata]	[more]
XP_023004337.1	2.8e-67	97.08	VQ motif-containing protein 11-like [Cucurbita maxima]	[more]
XP_038897860.1	9.0e-50	80.30	VQ motif-containing protein 11-like [Benincasa hispida]	[more]

BLAST of Carg23135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8L3	5.9e-20	46.88	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
Q9LDZ1	9.5e-10	33.52	VQ motif-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=VQ19 PE=1 SV=1	[more]
Q5M750	1.0e-08	30.22	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]
Q9FNP0	1.4e-08	36.71	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
Q9FHZ3	6.8e-08	31.61	VQ motif-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=VQ33 PE=1 SV=1	[more]

BLAST of Carg23135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8B6	1.6e-68	97.87	VQ motif-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC11146098...	[more]
A0A6J1KQ55	1.3e-67	97.08	VQ motif-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111497685 ...	[more]
A0A5D3CGZ5	4.8e-49	76.47	VQ motif-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CF34	4.8e-49	76.47	VQ motif-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103500018 PE=4 SV=1	[more]
A0A0A0K6W6	3.5e-47	75.74	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432350 PE=4 SV=...	[more]

BLAST of Carg23135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80450.1	4.2e-21	46.88	VQ motif-containing protein	[more]
AT3G15300.1	6.7e-11	33.52	VQ motif-containing protein	[more]
AT5G08480.1	4.4e-10	36.17	VQ motif-containing protein	[more]
AT1G28280.1	7.4e-10	30.22	VQ motif-containing protein	[more]
AT1G28280.2	7.4e-10	30.22	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 11..37 e-value: 7.8E-12 score: 44.5
IPR039611	VQ motif-containing protein 4/11/13/19/31/33	PANTHER	PTHR33402	VQ MOTIF-CONTAINING PROTEIN 11-LIKE	coord: 4..131
None	No IPR available	PANTHER	PTHR33402:SF19	VQ MOTIF-CONTAINING PROTEIN 11	coord: 4..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23135-RA	Carg23135-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus