Carg23094 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAAGAATTCCACGAATCCGACATCATCTTCTCCGACCACCGCCGCCGCCTCTTCCACTCTTCCCTCGACCATACCCAAATCCCCGTCACACCTCATCGGAACTCCAAAAACAACCACAAACATTCCGCCGCCTCTAGTCTCCCCATCAAAATCCCAGAAACCGTTTTCCGTTCCCCCTCCAACGCCGGGGAGCTGGACGAGGAATGGGAGAGTGACGACAATATAATCCCGCCGCACATGATCATCAGGCGGCGCCTGGCCGGAAAGATGGCCTTCTCTGTCTGCACCGGCGATGGAAGGACGCTTAAAGGAAGAGATTTATGCCACGTTCGAAATTCAATTCTTAGGATGACTGGATTTCTCGAAACTAATTGA ATGGCTGAAGAATTCCACGAATCCGACATCATCTTCTCCGACCACCGCCGCCGCCTCTTCCACTCTTCCCTCGACCATACCCAAATCCCCGTCACACCTCATCGGAACTCCAAAAACAACCACAAACATTCCGCCGCCTCTAGTCTCCCCATCAAAATCCCAGAAACCGTTTTCCGTTCCCCCTCCAACGCCGGGGAGCTGGACGAGGAATGGGAGAGTGACGACAATATAATCCCGCCGCACATGATCATCAGGCGGCGCCTGGCCGGAAAGATGGCCTTCTCTGTCTGCACCGGCGATGGAAGGACGCTTAAAGGAAGAGATTTATGCCACGTTCGAAATTCAATTCTTAGGATGACTGGATTTCTCGAAACTAATTGA ATGGCTGAAGAATTCCACGAATCCGACATCATCTTCTCCGACCACCGCCGCCGCCTCTTCCACTCTTCCCTCGACCATACCCAAATCCCCGTCACACCTCATCGGAACTCCAAAAACAACCACAAACATTCCGCCGCCTCTAGTCTCCCCATCAAAATCCCAGAAACCGTTTTCCGTTCCCCCTCCAACGCCGGGGAGCTGGACGAGGAATGGGAGAGTGACGACAATATAATCCCGCCGCACATGATCATCAGGCGGCGCCTGGCCGGAAAGATGGCCTTCTCTGTCTGCACCGGCGATGGAAGGACGCTTAAAGGAAGAGATTTATGCCACGTTCGAAATTCAATTCTTAGGATGACTGGATTTCTCGAAACTAATTGA MAEEFHESDIIFSDHRRRLFHSSLDHTQIPVTPHRNSKNNHKHSAASSLPIKIPETVFRSPSNAGELDEEWESDDNIIPPHMIIRRRLAGKMAFSVCTGDGRTLKGRDLCHVRNSILRMTGFLETN Homology
BLAST of Carg23094 vs. NCBI nr
Match: KAG7026498.1 (hypothetical protein SDJN02_10498, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 262.3 bits (669), Expect = 2.1e-66 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Carg23094 vs. NCBI nr
Match: XP_023518163.1 (uncharacterized protein LOC111781708 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.5 bits (589), Expect = 4.0e-57 Identity = 115/130 (88.46%), Postives = 119/130 (91.54%), Query Frame = 0
BLAST of Carg23094 vs. NCBI nr
Match: XP_023003525.1 (uncharacterized protein LOC111497106 [Cucurbita maxima]) HSP 1 Score: 228.4 bits (581), Expect = 3.4e-56 Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of Carg23094 vs. NCBI nr
Match: XP_038881487.1 (uncharacterized protein LOC120073009 [Benincasa hispida]) HSP 1 Score: 175.6 bits (444), Expect = 2.6e-40 Identity = 93/142 (65.49%), Postives = 107/142 (75.35%), Query Frame = 0
BLAST of Carg23094 vs. NCBI nr
Match: XP_022925703.1 (uncharacterized protein LOC111433041 [Cucurbita moschata] >KAG7034675.1 hypothetical protein SDJN02_04405, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175.3 bits (443), Expect = 3.4e-40 Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = 0
BLAST of Carg23094 vs. ExPASy TrEMBL
Match: A0A6J1KS02 (uncharacterized protein LOC111497106 OS=Cucurbita maxima OX=3661 GN=LOC111497106 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.7e-56 Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0
BLAST of Carg23094 vs. ExPASy TrEMBL
Match: A0A6J1EG03 (uncharacterized protein LOC111433041 OS=Cucurbita moschata OX=3662 GN=LOC111433041 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40 Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = 0
BLAST of Carg23094 vs. ExPASy TrEMBL
Match: A0A6J1IQW7 (uncharacterized protein LOC111477622 OS=Cucurbita maxima OX=3661 GN=LOC111477622 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 7.0e-39 Identity = 90/132 (68.18%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Carg23094 vs. ExPASy TrEMBL
Match: A0A1S3AZZ7 (uncharacterized protein LOC103484414 OS=Cucumis melo OX=3656 GN=LOC103484414 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 8.5e-37 Identity = 94/153 (61.44%), Postives = 106/153 (69.28%), Query Frame = 0
BLAST of Carg23094 vs. ExPASy TrEMBL
Match: A0A0A0KNP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G520440 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36 Identity = 93/153 (60.78%), Postives = 108/153 (70.59%), Query Frame = 0
BLAST of Carg23094 vs. TAIR 10
Match: AT2G34340.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 107.8 bits (268), Expect = 6.3e-24 Identity = 63/140 (45.00%), Postives = 87/140 (62.14%), Query Frame = 0
BLAST of Carg23094 vs. TAIR 10
Match: AT1G29640.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 99.0 bits (245), Expect = 2.9e-21 Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 0
BLAST of Carg23094 vs. TAIR 10
Match: AT5G45630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 86.7 bits (213), Expect = 1.5e-17 Identity = 55/128 (42.97%), Postives = 75/128 (58.59%), Query Frame = 0
BLAST of Carg23094 vs. TAIR 10
Match: AT4G18980.1 (AtS40-3 ) HSP 1 Score: 71.2 bits (173), Expect = 6.5e-13 Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of Carg23094 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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