Carg23021 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23021
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Carg_Chr05: 11138174 .. 11140321 (-)
RNA-Seq Expression	Carg23021
Synteny	Carg23021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTCTCTCTCGTTTCCACCACCACCTCCTCCTCCGCTTCCGCCGCCACCGCCGTCCTATTACCTCCACATCACCACCACCGCCGTCGCCCTACCGGAGACATTGCACTTCCTCGTCGATCCCTCCTCCTTCTCTCCACGTCCCTCTCTCTCTCCACCGCTGTCGATCCACCTCCCTCCCCGGCTTCCCCTTCGCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCAACCAACTTCCTTCCCAATCGTGAATCCGCCGATGATGGCGGCGATTCCATCCTCTGCTCCGATTCCGCCCTCCTCGGTCGCCTCGTTCTCGGCCTCTACGGCCACCTGGTTCCAATCACCGTCGCCAATTTCAAATCCATGTGTACCGGATCCTGCGGCTCCTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCTGGCCAATTCTTCCTCGCCGGTCGACAGGGTCGCCGCGACAAAGGAGCAGTCCGGCCACCGCAACAATTGCCGAGAAATACGGAGACGGTGAAGTCAGATTCGTTCTTGCTTTCGCATTCTAGAGGCGGCATTGTTTCTTTGTGCCTTTCGGAGAACGACGACGACGACGAATTGAAATTGGATCCAAATTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCGAGAACATTGTCTTCGGGACTGTGCTTGAAGGTACAAATTCAAACTAATTTCTCACGATTTACTCTTTACATTTTACATTTGATCCTTATGATTAGTTTTAGAAGTTTCAATTAATCAGTTTCATAATCCTGCATGCCATTTCTAATCCAATCCATTTAACACATTAGCTCAGGAGGGATATATGTTAAGATTTATTGGGAGGGAGTCCCACCTTCCAGAGGGGTTGATCATAGATAAGGAATAGATCTTTATTGGTATGGAGGAGCCCAAAGCAAAACCATGAAACCTTAAGCTTAAAGTAGACAATATCACACCACTGTAGAGAGTCGTGATTCCATAGTATCAGAGCTATGTTCTTAATTTAGCCATGTCAATAGAATCCAAGTGTCGAAAAAAGAAATGGCTAGCATTGAAGGTATAGTCAAAAGTGACTCATGCGTCGAATAAAGGTGTACTTTGTTCGAGGGTTGAGGAGTCAAGCCTCAAATAAGGGGAGCCTATTCGAGGGCTACATAAACCTCAGGAGAGGCGGCTCTATGGTGTACTTTCTTCGAGGGGAGGATTGTTGGGAGAGAGTTCCACATTGGCTAATTTAGGGGTTGATCATAGATTTGTAATAAAGAATACATCTCTATTGATATGAGGTCTTTTGGGGAAGCCCAAAGCAAAGCACCAATGTGGAGAGTCGTGATTCTTAATAGCATCCAAATAATGTCACTCATTTTTCACTCGAGTAAAGTTTAATCATAGCATAGATGATTTAAAACAAAGATCAAATTGTAAGGAGAAATCGAAAAACTTCACCAAATTAGTGCTAAGCAAAAGGGATGAAATTAGTACAAAAGATTTTTGATATCTGTGTAAAATTTGGGAATTTCAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTGGCTAAGTTCTTAGGAGATGAAAGGGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAACTCAAAGTTGCAAAGCCTTCACTGACTCCAACTCTGCCTTAAACACAGCCCACTTGCCCTTTGTTATCTCTCAAGGTTCCATTTCTTTGCCTTCTCATATTTCTTTGTGTTCTTCTGTGAAAATTGAACATTCCATCCCCATGTTTTTATTTTTGTTTTCTCACATGAACAAAGGGCTAACCAGGCCTCTGTTCTTGTTTTGACCATTGTCTGTGTTCAAACCAATCGGAAATCAAATTTTGATGTCAATGCTGTTGACATTTTATATGCCAAAGAAAGCACAAATTCGTTGTCGTTCACTCATTGTTATTGTTTTTGTCATGTTCGTTATATGTGAGATCTCATATCGGTTGGGGAGGGGAACAAAACATTCCTCGTAAGGGTGTAGAAACCTCTCCTTAACA

mRNA sequence

ATGGCCTTCTCTCTCGTTTCCACCACCACCTCCTCCTCCGCTTCCGCCGCCACCGCCGTCCTATTACCTCCACATCACCACCACCGCCGTCGCCCTACCGGAGACATTGCACTTCCTCGTCGATCCCTCCTCCTTCTCTCCACGTCCCTCTCTCTCTCCACCGCTGTCGATCCACCTCCCTCCCCGGCTTCCCCTTCGCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCAACCAACTTCCTTCCCAATCGTGAATCCGCCGATGATGGCGGCGATTCCATCCTCTGCTCCGATTCCGCCCTCCTCGGTCGCCTCGTTCTCGGCCTCTACGGCCACCTGGTTCCAATCACCGTCGCCAATTTCAAATCCATGTGTACCGGATCCTGCGGCTCCTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCTGGCCAATTCTTCCTCGCCGGTCGACAGGGTCGCCGCGACAAAGGAGCAGTCCGGCCACCGCAACAATTGCCGAGAAATACGGAGACGGTGAAGTCAGATTCGTTCTTGCTTTCGCATTCTAGAGGCGGCATTGTTTCTTTGTGCCTTTCGGAGAACGACGACGACGACGAATTGAAATTGGATCCAAATTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCGAGAACATTGTCTTCGGGACTGTGCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTGGCTAAGTTCTTAGGAGATGAAAGGGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAACTCAAAGTTGCAAAGCCTTCACTGACTCCAACTCTGCCTTAAACACAGCCCACTTGCCCTTTGTTATCTCTCAAGGTTCCATTTCTTTGCCTTCTCATATTTCTTTGTGTTCTTCTGTGAAAATTGAACATTCCATCCCCATGTTTTTATTTTTGTTTTCTCACATGAACAAAGGGCTAACCAGGCCTCTGTTCTTGTTTTGACCATTGTCTGTGTTCAAACCAATCGGAAATCAAATTTTGATGTCAATGCTGTTGACATTTTATATGCCAAAGAAAGCACAAATTCGTTGTCGTTCACTCATTGTTATTGTTTTTGTCATGTTCGTTATATGTGAGATCTCATATCGGTTGGGGAGGGGAACAAAACATTCCTCGTAAGGGTGTAGAAACCTCTCCTTAACA

Coding sequence (CDS)

ATGGCCTTCTCTCTCGTTTCCACCACCACCTCCTCCTCCGCTTCCGCCGCCACCGCCGTCCTATTACCTCCACATCACCACCACCGCCGTCGCCCTACCGGAGACATTGCACTTCCTCGTCGATCCCTCCTCCTTCTCTCCACGTCCCTCTCTCTCTCCACCGCTGTCGATCCACCTCCCTCCCCGGCTTCCCCTTCGCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCAACCAACTTCCTTCCCAATCGTGAATCCGCCGATGATGGCGGCGATTCCATCCTCTGCTCCGATTCCGCCCTCCTCGGTCGCCTCGTTCTCGGCCTCTACGGCCACCTGGTTCCAATCACCGTCGCCAATTTCAAATCCATGTGTACCGGATCCTGCGGCTCCTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCTGGCCAATTCTTCCTCGCCGGTCGACAGGGTCGCCGCGACAAAGGAGCAGTCCGGCCACCGCAACAATTGCCGAGAAATACGGAGACGGTGAAGTCAGATTCGTTCTTGCTTTCGCATTCTAGAGGCGGCATTGTTTCTTTGTGCCTTTCGGAGAACGACGACGACGACGAATTGAAATTGGATCCAAATTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCGAGAACATTGTCTTCGGGACTGTGCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTGGCTAAGTTCTTAGGAGATGAAAGGGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAACTCAAAGTTGCAAAGCCTTCACTGACTCCAACTCTGCCTTAA

Protein sequence

MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLTPTLP

Homology

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BLAST of Carg23021 vs. NCBI nr
Match: KAG7030345.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 627.1 bits (1616), Expect = 8.2e-176
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP
Sbjct: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV
Sbjct: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300

Query: 301 VAKPSLTPTLP 312
           VAKPSLTPTLP
Sbjct: 301 VAKPSLTPTLP 311

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BLAST of Carg23021 vs. NCBI nr
Match: XP_022946676.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata] >XP_022946677.1 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata])

HSP 1 Score: 627.1 bits (1616), Expect = 8.2e-176
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP
Sbjct: 2   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 61

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 62  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 121

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 122 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 181

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV
Sbjct: 182 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 241

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 242 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 301

Query: 301 VAKPSLTPTLP 312
           VAKPSLTPTLP
Sbjct: 302 VAKPSLTPTLP 312

[Close]

BLAST of Carg23021 vs. NCBI nr
Match: KAG6599358.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 619.8 bits (1597), Expect = 1.3e-173
Identity = 310/314 (98.73%), Postives = 310/314 (98.73%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSAS---AATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVD 60
           MAFSLVSTTTSSSAS   AATAVLLPPHHHHRR PTGDIALPRRSLLLLSTSLSLSTAVD
Sbjct: 2   MAFSLVSTTTSSSASAATAATAVLLPPHHHHRRHPTGDIALPRRSLLLLSTSLSLSTAVD 61

Query: 61  PPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYG 120
           PPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYG
Sbjct: 62  PPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYG 121

Query: 121 HLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTE 180
           HLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTE
Sbjct: 122 HLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTE 181

Query: 181 TVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVF 240
           TVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVF
Sbjct: 182 TVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVF 241

Query: 241 GTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCG 300
           GTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCG
Sbjct: 242 GTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCG 301

Query: 301 ELKVAKPSLTPTLP 312
           ELKVAKPSLTPTLP
Sbjct: 302 ELKVAKPSLTPTLP 315

[Close]

BLAST of Carg23021 vs. NCBI nr
Match: XP_022999012.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima] >XP_022999013.1 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima])

HSP 1 Score: 618.2 bits (1593), Expect = 3.8e-173
Identity = 305/311 (98.07%), Postives = 310/311 (99.68%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAFSLVSTT+SSSASAATAVLLPPHHHHRRRP GDIALPRRSLLLLSTSLSLSTAVDPPP
Sbjct: 2   MAFSLVSTTSSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTAVDPPP 61

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSP+TTITDRVF+DFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 62  SPASPSPNTTITDRVFLDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 121

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 122 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 181

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLD+ENIVFGTV
Sbjct: 182 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDNENIVFGTV 241

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 242 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 301

Query: 301 VAKPSLTPTLP 312
           VAKPSL+PTLP
Sbjct: 302 VAKPSLSPTLP 312

[Close]

BLAST of Carg23021 vs. NCBI nr
Match: XP_023545629.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 615.5 bits (1586), Expect = 2.5e-172
Identity = 307/311 (98.71%), Postives = 308/311 (99.04%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAFSLVS TTSSSASAATAVLLPPHHHHRRRP GDIALPRRSLLLLSTSLSLST VDPPP
Sbjct: 2   MAFSLVS-TTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPP 61

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 62  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 121

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 122 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 181

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV
Sbjct: 182 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 241

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 242 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 301

Query: 301 VAKPSLTPTLP 312
           VAKPSL+PTLP
Sbjct: 302 VAKPSLSPTLP 311

[Close]

BLAST of Carg23021 vs. ExPASy Swiss-Prot
Match: O65220 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP28 PE=1 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.1e-97
Identity = 188/299 (62.88%), Postives = 221/299 (73.91%), Query Frame = 0


Query: 16  AATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPPSPASPSPDTTITDRV 75
           A++++L+PP             L RR+LLL +T       V PPP    PSPD TITDRV
Sbjct: 2   ASSSILIPP------------ILTRRNLLLSTT----IATVTPPPPAKPPSPDITITDRV 61

Query: 76  FIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSC 135
           F+DFS+CPT F    + +     +  CSDS  LGR+VLGLYG  VPITV+ FK MCT S 
Sbjct: 62  FLDFSLCPTYF--RSDPSATLSSTTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS- 121

Query: 136 GSSYKGTLVHKIFPGQFFLAGRQ--GRRDKGAV-RPPQQLPRNTETVKSDSFLLSHSRGG 195
            +SYK T VHKIFPGQ+FLAGRQ  GRRD   V    + LPRNT+ V S +FLL H+R G
Sbjct: 122 STSYKNTPVHKIFPGQYFLAGRQGGGRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAG 181

Query: 196 IVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISS 255
           +VSLCLSENDDDD+++LDP+Y NVEFLITTGPGP PQLD  NIVFGTVLEGLDVV +ISS
Sbjct: 182 VVSLCLSENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 241

Query: 256 TPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLTPTLP 312
            PTYKPSE I+QFND A+FLGDERAQNAR++WNRPL+TV+IS CGELKV  PSL+PTLP
Sbjct: 242 IPTYKPSENIKQFNDFAEFLGDERAQNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 281

[Close]

BLAST of Carg23021 vs. ExPASy Swiss-Prot
Match: Q9ASS6 (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-16
Identity = 69/237 (29.11%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 67  PDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVAN 126
           P + IT +V+ D S+               G+ +      L GR+V+GLYG  VP TV N
Sbjct: 84  PQSKITHKVYFDISV---------------GNPV----GKLAGRIVIGLYGDDVPQTVEN 143

Query: 127 FKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLL 186
           F+++CTG  G  YKG+  H++    F + G  G  +KG     + +     T K ++F L
Sbjct: 144 FRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNGTGGKSV--YGRTFKDENFKL 203

Query: 187 SHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDV 246
           SH   G++S+              PN +  +F I T       LD  ++VFG V+EG++V
Sbjct: 204 SHVGPGVLSMA----------NAGPNTNGSQFFICT--IKTSWLDGRHVVFGQVIEGMEV 258

Query: 247 VAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAK 304
           V  I    T +               GD           RP + V I+DCG+L +++
Sbjct: 264 VKLIEEQETDR---------------GD-----------RPRKKVVIADCGQLPMSE 258

[Close]

BLAST of Carg23021 vs. ExPASy Swiss-Prot
Match: Q01490 (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 GN=CYPB PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.8e-16
Identity = 64/195 (32.82%), Postives = 88/195 (45.13%), Query Frame = 0


Query: 108 LGRLVLGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVR 167
           LGR+VLGLYG +VP TV NF+++ TG  G  YK +  H++    F + G    R  G   
Sbjct: 43  LGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIK-DFMIQGGDFTRGDGTGG 102

Query: 168 PPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPC 227
                    E    ++F L H+  GI+S+  +  D +            +F ITT     
Sbjct: 103 KSIY----GERFADENFKLRHTGPGILSMANAGRDTNGS----------QFFITT--VTT 162

Query: 228 PQLDSENIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRP 287
             LD  ++VFG V+EG+DVV AI +T T                 GD           RP
Sbjct: 163 SWLDGRHVVFGKVIEGMDVVTAIETTKTLP---------------GD-----------RP 194

Query: 288 LQTVYISDCGELKVA 303
              V I+DCGEL V+
Sbjct: 223 ATPVIIADCGELPVS 194

[Close]

BLAST of Carg23021 vs. ExPASy Swiss-Prot
Match: Q41651 (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 59/187 (31.55%), Postives = 86/187 (45.99%), Query Frame = 0


Query: 71  ITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSM 130
           +T ++F D  I              GG+S         GR+V+GL+G  VP TV NFK++
Sbjct: 80  VTSKIFFDIEI--------------GGES--------AGRIVIGLFGDAVPKTVENFKTL 139

Query: 131 CTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLLSHSR 190
            TG+ G  Y+G+  H+I P  F + G       G       +       + +SF L H  
Sbjct: 140 STGAKGYGYQGSFFHRIIP-NFMIQGGDFTEGNGT----GGVSIYGSKFEDESFDLKHVG 199

Query: 191 GGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAI 250
            G++S+              PN +  +F I T   P P LD+ ++VFG V+EGLDVV  +
Sbjct: 200 PGVLSMA----------NAGPNTNGSQFFICT--VPTPWLDNRHVVFGHVIEGLDVVKQL 227

Query: 251 SSTPTYK 258
            S  T K
Sbjct: 260 ESQETSK 227

[Close]

BLAST of Carg23021 vs. ExPASy Swiss-Prot
Match: P18253 (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ppi1 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.6e-15
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0


Query: 108 LGRLVLGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVR 167
           LGR+V  L+  +VP T ANF+++CTG  G  Y G+  H++ P QF L G    R  G   
Sbjct: 15  LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIP-QFMLQGGDFTRGNGTGG 74

Query: 168 PPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPC 227
                    E    ++F L H++ G++S+              PN +  +F ITT     
Sbjct: 75  KSIY----GEKFPDENFALKHNKPGLLSMA----------NAGPNTNGSQFFITT--VVT 134

Query: 228 PQLDSENIVFGTVLEGLDVVAAISSTPTYKPSERIR 264
           P LD +++VFG V EG+DVV  + S  +   + R R
Sbjct: 135 PWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRAR 153

[Close]

BLAST of Carg23021 vs. ExPASy TrEMBL
Match: A0A6J1G4B4 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450670 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 3.9e-176
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP
Sbjct: 2   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 61

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 62  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 121

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 122 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 181

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV
Sbjct: 182 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 241

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 242 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 301

Query: 301 VAKPSLTPTLP 312
           VAKPSLTPTLP
Sbjct: 302 VAKPSLTPTLP 312

[Close]

BLAST of Carg23021 vs. ExPASy TrEMBL
Match: A0A6J1KIE5 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493528 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.8e-173
Identity = 305/311 (98.07%), Postives = 310/311 (99.68%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAFSLVSTT+SSSASAATAVLLPPHHHHRRRP GDIALPRRSLLLLSTSLSLSTAVDPPP
Sbjct: 2   MAFSLVSTTSSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTAVDPPP 61

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSP+TTITDRVF+DFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 62  SPASPSPNTTITDRVFLDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 121

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 122 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 181

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLD+ENIVFGTV
Sbjct: 182 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDNENIVFGTV 241

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 242 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 301

Query: 301 VAKPSLTPTLP 312
           VAKPSL+PTLP
Sbjct: 302 VAKPSLSPTLP 312

[Close]

BLAST of Carg23021 vs. ExPASy TrEMBL
Match: A0A0A0LFD1 (PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009340 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 281/311 (90.35%), Postives = 296/311 (95.18%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAF+L+S  TSSSA+A T  LLPPHH+HRR  +GDI LPRRSLLLLSTSLSLSTAV+PPP
Sbjct: 1   MAFALLS--TSSSAAATTVALLPPHHNHRRLRSGDITLPRRSLLLLSTSLSLSTAVNPPP 60

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           S ASPSPDTTITDRVFIDFSICPTNFLPNRES DDGGDS+LCSDS LLGRLV+GLYGHLV
Sbjct: 61  SLASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVLLGRLVIGLYGHLV 120

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           P T +NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKG VRPP QLPRNTE+VK
Sbjct: 121 PTTASNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVK 180

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGG++SLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCPQLDS+NIVFGTV
Sbjct: 181 SDSFLLSHSRGGVISLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTV 240

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300

Query: 301 VAKPSLTPTLP 312
           VAKPSL+PTLP
Sbjct: 301 VAKPSLSPTLP 309

[Close]

BLAST of Carg23021 vs. ExPASy TrEMBL
Match: A0A5D3BI73 (Peptidyl-prolyl cis-trans isomerase CYP28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00920 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.8e-158
Identity = 279/311 (89.71%), Postives = 296/311 (95.18%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAF+L+S T SSSA+A T  LLPPHH++RR  +GD  LPRRSLLLLSTSLSLSTA++PPP
Sbjct: 1   MAFALLS-TYSSSAAAITTALLPPHHNYRRFRSGDTTLPRRSLLLLSTSLSLSTAINPPP 60

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSPDTTITDRVFIDFSICPTNFLPNRES DDG DS+LCSDS LLGRLV+GLYGHLV
Sbjct: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGSDSLLCSDSVLLGRLVIGLYGHLV 120

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITV+NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKG VRPP QLPRNTE+VK
Sbjct: 121 PITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVK 180

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGG+VSLCLSENDDDD+LKLDP+YHNVEFLITTGPGPCPQLDS+NIVFGTV
Sbjct: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPDYHNVEFLITTGPGPCPQLDSKNIVFGTV 240

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYIS CGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISGCGELK 300

Query: 301 VAKPSLTPTLP 312
           VAKPSL+PTLP
Sbjct: 301 VAKPSLSPTLP 310

[Close]

BLAST of Carg23021 vs. ExPASy TrEMBL
Match: A0A1S3C403 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496583 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.8e-158
Identity = 279/311 (89.71%), Postives = 296/311 (95.18%), Query Frame = 0


Query: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60
           MAF+L+S T SSSA+A T  LLPPHH++RR  +GD  LPRRSLLLLSTSLSLSTA++PPP
Sbjct: 1   MAFALLS-TYSSSAAAITTALLPPHHNYRRFRSGDTTLPRRSLLLLSTSLSLSTAINPPP 60

Query: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120
           SPASPSPDTTITDRVFIDFSICPTNFLPNRES DDG DS+LCSDS LLGRLV+GLYGHLV
Sbjct: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGSDSLLCSDSVLLGRLVIGLYGHLV 120

Query: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180
           PITV+NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKG VRPP QLPRNTE+VK
Sbjct: 121 PITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVK 180

Query: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240
           SDSFLLSHSRGG+VSLCLSENDDDD+LKLDP+YHNVEFLITTGPGPCPQLDS+NIVFGTV
Sbjct: 181 SDSFLLSHSRGGVVSLCLSENDDDDDLKLDPDYHNVEFLITTGPGPCPQLDSKNIVFGTV 240

Query: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYIS CGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISGCGELK 300

Query: 301 VAKPSLTPTLP 312
           VAKPSL+PTLP
Sbjct: 301 VAKPSLSPTLP 310

[Close]

BLAST of Carg23021 vs. TAIR 10
Match: AT5G35100.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.5e-98
Identity = 188/299 (62.88%), Postives = 221/299 (73.91%), Query Frame = 0


Query: 16  AATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPPSPASPSPDTTITDRV 75
           A++++L+PP             L RR+LLL +T       V PPP    PSPD TITDRV
Sbjct: 2   ASSSILIPP------------ILTRRNLLLSTT----IATVTPPPPAKPPSPDITITDRV 61

Query: 76  FIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSC 135
           F+DFS+CPT F    + +     +  CSDS  LGR+VLGLYG  VPITV+ FK MCT S 
Sbjct: 62  FLDFSLCPTYF--RSDPSATLSSTTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS- 121

Query: 136 GSSYKGTLVHKIFPGQFFLAGRQ--GRRDKGAV-RPPQQLPRNTETVKSDSFLLSHSRGG 195
            +SYK T VHKIFPGQ+FLAGRQ  GRRD   V    + LPRNT+ V S +FLL H+R G
Sbjct: 122 STSYKNTPVHKIFPGQYFLAGRQGGGRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAG 181

Query: 196 IVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISS 255
           +VSLCLSENDDDD+++LDP+Y NVEFLITTGPGP PQLD  NIVFGTVLEGLDVV +ISS
Sbjct: 182 VVSLCLSENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 241

Query: 256 TPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLTPTLP 312
            PTYKPSE I+QFND A+FLGDERAQNAR++WNRPL+TV+IS CGELKV  PSL+PTLP
Sbjct: 242 IPTYKPSENIKQFNDFAEFLGDERAQNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 281

[Close]

BLAST of Carg23021 vs. TAIR 10
Match: AT5G35100.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 304.7 bits (779), Expect = 8.6e-83
Identity = 168/298 (56.38%), Postives = 197/298 (66.11%), Query Frame = 0


Query: 16  AATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPPSPASPSPDTTITDRV 75
           A++++L+PP             L RR+LLL +T       V PPP    PSPD TITDRV
Sbjct: 2   ASSSILIPP------------ILTRRNLLLSTT----IATVTPPPPAKPPSPDITITDRV 61

Query: 76  FIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSC 135
           F+DFS+CPT F    + +     +  CSDS  LGR+VLGLYG  VPITV+ FK MCT S 
Sbjct: 62  FLDFSLCPTYF--RSDPSATLSSTTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS- 121

Query: 136 GSSYKGTLVHKIFPGQFFLAGRQ--GRRDKGAVRPPQQLPRNTETVKSDSFLLSHSRGGI 195
            +SYK T VHKIFPGQ+FLAGRQ  GRRD                               
Sbjct: 122 STSYKNTPVHKIFPGQYFLAGRQGGGRRD------------------------------- 181

Query: 196 VSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISST 255
                +ENDDDD+++LDP+Y NVEFLITTGPGP PQLD  NIVFGTVLEGLDVV +ISS 
Sbjct: 182 ----TAENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSI 241

Query: 256 PTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLTPTLP 312
           PTYKPSE I+QFND A+FLGDERAQNAR++WNRPL+TV+IS CGELKV  PSL+PTLP
Sbjct: 242 PTYKPSENIKQFNDFAEFLGDERAQNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 245

[Close]

BLAST of Carg23021 vs. TAIR 10
Match: AT5G13120.1 (cyclophilin 20-2 )

HSP 1 Score: 86.7 bits (213), Expect = 3.7e-17
Identity = 69/237 (29.11%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 67  PDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVAN 126
           P + IT +V+ D S+               G+ +      L GR+V+GLYG  VP TV N
Sbjct: 84  PQSKITHKVYFDISV---------------GNPV----GKLAGRIVIGLYGDDVPQTVEN 143

Query: 127 FKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLL 186
           F+++CTG  G  YKG+  H++    F + G  G  +KG     + +     T K ++F L
Sbjct: 144 FRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNGTGGKSV--YGRTFKDENFKL 203

Query: 187 SHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDV 246
           SH   G++S+              PN +  +F I T       LD  ++VFG V+EG++V
Sbjct: 204 SHVGPGVLSMA----------NAGPNTNGSQFFICT--IKTSWLDGRHVVFGQVIEGMEV 258

Query: 247 VAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAK 304
           V  I    T +               GD           RP + V I+DCG+L +++
Sbjct: 264 VKLIEEQETDR---------------GD-----------RPRKKVVIADCGQLPMSE 258

[Close]

BLAST of Carg23021 vs. TAIR 10
Match: AT5G13120.2 (cyclophilin 20-2 )

HSP 1 Score: 86.7 bits (213), Expect = 3.7e-17
Identity = 69/237 (29.11%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 67  PDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVAN 126
           P + IT +V+ D S+               G+ +      L GR+V+GLYG  VP TV N
Sbjct: 80  PQSKITHKVYFDISV---------------GNPV----GKLAGRIVIGLYGDDVPQTVEN 139

Query: 127 FKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLL 186
           F+++CTG  G  YKG+  H++    F + G  G  +KG     + +     T K ++F L
Sbjct: 140 FRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNGTGGKSV--YGRTFKDENFKL 199

Query: 187 SHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDV 246
           SH   G++S+              PN +  +F I T       LD  ++VFG V+EG++V
Sbjct: 200 SHVGPGVLSMA----------NAGPNTNGSQFFICT--IKTSWLDGRHVVFGQVIEGMEV 254

Query: 247 VAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAK 304
           V  I    T +               GD           RP + V I+DCG+L +++
Sbjct: 260 VKLIEEQETDR---------------GD-----------RPRKKVVIADCGQLPMSE 254

[Close]

BLAST of Carg23021 vs. TAIR 10
Match: AT4G34960.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 76.3 bits (186), Expect = 5.0e-14
Identity = 71/245 (28.98%), Postives = 110/245 (44.90%), Query Frame = 0


Query: 30  RRPTGDIALPRRSLLLLSTSLSLSTAV--DPPPSPASPSPDTTITDRVFIDFSICPTNFL 89
           RR    +  PR  LLL++ ++ L  A+             D  IT+RVF+D  I      
Sbjct: 2   RREISFLLQPRCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDI------ 61

Query: 90  PNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSCGSS-------YK 149
                           D   LGR+V+GLYG +VP TV NF+++CTG  G +       YK
Sbjct: 62  ----------------DGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYK 121

Query: 150 GTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSE 209
           GT  H+I  G F + G  G    G  +    +     T   ++F + HS  G+V++    
Sbjct: 122 GTPFHRIISG-FVIQG--GDIIHGDGKSSDSIYGG--TFPDENFKIQHSHAGMVAMA--- 181

Query: 210 NDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAI---SSTPTYK 263
                     P+ +  +F ITT       L+ E++V G V++G+D V AI   + T + K
Sbjct: 182 -------NTGPDSNGSQFFITT--VKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGK 207

The following BLAST results are available for this feature:

BLAST of Carg23021 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030345.1	8.2e-176	100.00	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita arg...	[more]
XP_022946676.1	8.2e-176	100.00	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata] >X...	[more]
KAG6599358.1	1.3e-173	98.73	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita arg...	[more]
XP_022999012.1	3.8e-173	98.07	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima] >XP_...	[more]
XP_023545629.1	2.5e-172	98.71	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita pepo subsp. ...	[more]

BLAST of Carg23021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65220	2.1e-97	62.88	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana...	[more]
Q9ASS6	5.2e-16	29.11	Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis t...	[more]
Q01490	6.8e-16	32.82	Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 ...	[more]
Q41651	2.0e-15	31.55	Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV...	[more]
P18253	2.6e-15	33.33	Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / A...	[more]

BLAST of Carg23021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4B4	3.9e-176	100.00	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita moschata O...	[more]
A0A6J1KIE5	1.8e-173	98.07	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita maxima OX=...	[more]
A0A0A0LFD1	1.2e-159	90.35	PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A5D3BI73	4.8e-158	89.71	Peptidyl-prolyl cis-trans isomerase CYP28 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C403	4.8e-158	89.71	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucumis melo OX=3656...	[more]

BLAST of Carg23021 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35100.1	1.5e-98	62.88	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G35100.2	8.6e-83	56.38	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G13120.1	3.7e-17	29.11	cyclophilin 20-2	[more]
AT5G13120.2	3.7e-17	29.11	cyclophilin 20-2	[more]
AT4G34960.1	5.0e-14	28.98	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 144..156 score: 24.27 coord: 115..130 score: 40.36 coord: 232..247 score: 46.32
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 108..260 e-value: 1.2E-18 score: 67.9
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 108..298 score: 20.258257
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 64..270 e-value: 9.1E-28 score: 99.3
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 107..299
IPR044178	Peptidyl-prolyl cis-trans isomerase CYP28-like	PANTHER	PTHR47875	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP28, CHLOROPLASTIC	coord: 8..311
None	No IPR available	CDD	cd00317	cyclophilin	coord: 109..263 e-value: 2.27926E-26 score: 99.6456

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23021-RA	Carg23021-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity