Carg22995 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22995
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Alba domain-containing protein
Location	Carg_Chr05: 10898546 .. 10900593 (+)
RNA-Seq Expression	Carg22995
Synteny	Carg22995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCGAGAAAAGAAAATCCTCTCTGTTTCTTTGATCTGTGTGAGAGTGAGAGAGTTCGAAGTGTGAAGAACAACAGAAGCAATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGGTATATATATACTAATCCTTCTTCTTTCGTTTGATTTTAATCACTGAGAATTTCGATTTTGTTCTGTTCTTGTTTCGTTCTCAAGAAATGAAATCGAAAATATATAATGTAATAACGATCCATCAATCTGTGTTCTTCTTTTTGTGATCTGAACAAATTTACTGTTGAAGATCTTTGGAAGGGAGTCTGACTAATTTAGGGAATAATCGTGGGTTTAGTTTATAAGTAAGGAATACATTTTCATTGGTACGAGGCTTTTTGGGAAATTAAAAGTCACGAGAATTCATGTTCAAAGTGGACAATACCATACTACTGTAGAGATCCGTGATTCCTACCATGATATAAGAGCCATGTCAAAGTGGACAATATCATACTATTGTGGAGAGTTGTGATTTTTAATAGGCTATAAGAGTCATGTCAAAGTAGACAATTTCATACCATTGTGGAGAGTTATGATTTTTAACATAGTATTAAAGTCATGCCCTTAACTTAGTTATATTAATAGAATTCTCAAGCGTTGTATAATGAAGTTGTGAGCCTTGAAAATGTAGTCAAAAGTGACTCAAACGTTGAACAAATGGTGTACTTTGTTTGAGGACTCCAGAAAAGGAGTTGAGCCTTGATTAATAGGAGGCTGTTCAAGGGCTCCATAGGTCTCGAGGGAGACTCTGTAGTGTACTTTGTTTGAGGTGAGGATTGTTGAGAGGGCTTAAGCTTCATACGAGGCCTTTTGGATAAACCAAAAATAAAGTCATGAGAACTTATGTTCAAAGTGGATCATATCATACTATTGTGGAGAGCCATGATTCCTTACATTTACTTCCATAATCCTCTGATTTTAGTTTATACGTTGTTTGGTTGTTTTCGATGACAACAAGTTTTTTACGTAATTGTTTTGATTCTTGATTCAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCCGCCTTGGGAATGGGTACTGTTTTAATTTTCCTCTGATCGATATACGTTGTTCTCGACGAATCATATCTGATGAACTTTTGGTTTTCTTGCATCGAATCCTTCGAAATTGTTACAGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGACTGGCTACAGAGAAGAGTAACTCTGTTTCTTCGTCTTTAATGCTAATTTCTGTTGGTAATATAAAATGGTGATGATTATTGATAATCGTATGGTTTTGCTATGAATAGAAGTTTTGACTTCCACCGTCGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAGGTTAGTTCATTTGTGAATTCTTATCAAATTTTATCGTTTTGACATCAAATTGCTCTGTTTTGTGATAGATTGAGATAGTTCTCGGAAAGTCAGAGAAATTTGATTCTCTGATGACTGCGGCTACGACAGTACCAGAGCCGGCGGTGGCGACGGCGACGGCGACAGCGATGGCGGCTCCTGTTGCTGCTGAAGAGAAAAAAGAAGAGGAAAGCAAGGAGGAGCAGTAGGGGGAGGAGGAGAGGTGAATTTGAATGTTACATTGTTGTAGTTTAAGAATCACATTGCAATGTTATAGGATAGGTTGTTTTCTTCTTTTTCTTGAACGGTCACGTTTATGAATGACATGTTTAGTGTCGTAATCCATTGTGTGATGAAGTGGATTGTGCTTCCGATCAGGTCATCTGCTCTTCTCATAGTATGGTTGTGACCATGTCATTACCCCAAAAAAATTTCAATTTTTTTCTCTCTCTACTGTGTTGAGACGTTGCATTTGGTTGGTACTTCTCTGTTGCATCTAATGAAGTAAATCTCTGATACTTCTTTT

mRNA sequence

TTCCGAGAAAAGAAAATCCTCTCTGTTTCTTTGATCTGTGTGAGAGTGAGAGAGTTCGAAGTGTGAAGAACAACAGAAGCAATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCCGCCTTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGACTGGCTACAGAGAAGAAAGTTTTGACTTCCACCGTCGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAGATTGAGATAGTTCTCGGAAAGTCAGAGAAATTTGATTCTCTGATGACTGCGGCTACGACAGTACCAGAGCCGGCGGTGGCGACGGCGACGGCGACAGCGATGGCGGCTCCTGTTGCTGCTGAAGAGAAAAAAGAAGAGGAAAGCAAGGAGGAGCAGTAGGGGGAGGAGGAGAGGTGAATTTGAATGTTACATTGTTGTAGTTTAAGAATCACATTGCAATGTTATAGGATAGGTTGTTTTCTTCTTTTTCTTGAACGGTCACGTTTATGAATGACATGTTTAGTGTCGTAATCCATTGTGTGATGAAGTGGATTGTGCTTCCGATCAGGTCATCTGCTCTTCTCATAGTATGGTTGTGACCATGTCATTACCCCAAAAAAATTTCAATTTTTTTCTCTCTCTACTGTGTTGAGACGTTGCATTTGGTTGGTACTTCTCTGTTGCATCTAATGAAGTAAATCTCTGATACTTCTTTT

Coding sequence (CDS)

ATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCCGCCTTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAGAACAATGGACTGGCTACAGAGAAGAAAGTTTTGACTTCCACCGTCGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAGATTGAGATAGTTCTCGGAAAGTCAGAGAAATTTGATTCTCTGATGACTGCGGCTACGACAGTACCAGAGCCGGCGGTGGCGACGGCGACGGCGACAGCGATGGCGGCTCCTGTTGCTGCTGAAGAGAAAAAAGAAGAGGAAAGCAAGGAGGAGCAGTAG

Protein sequence

MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ

Homology

[Close]

BLAST of Carg22995 vs. NCBI nr
Match: XP_022946134.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata] >KAG7030319.1 hypothetical protein SDJN02_08666 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.6 bits (701), Expect = 5.2e-70
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 159
           MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ
Sbjct: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 158

[Close]

BLAST of Carg22995 vs. NCBI nr
Match: KAG6599323.1 (Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.3 bits (656), Expect = 8.6e-65
Identity = 153/164 (93.29%), Postives = 153/164 (93.29%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAV-------ATATATAMAAPVAAEEKKEEESKEE 158
           MTAAT VPE AV       ATATATA AAP AAEEKKEEESKEE
Sbjct: 121 MTAATAVPEAAVATTAVVAATATATATAAPAAAEEKKEEESKEE 164

[Close]

BLAST of Carg22995 vs. NCBI nr
Match: XP_022999100.1 (uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima])

HSP 1 Score: 256.5 bits (654), Expect = 1.5e-64
Identity = 152/163 (93.25%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTP AAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPVAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAVAT-----ATATAMAAPVAAEEKKEEESKEEQ 159
           MTAAT VPE AVAT     ATAT  AAP AAEEKKEEESKEEQ
Sbjct: 121 MTAATVVPEAAVATTAVVAATATVTAAPAAAEEKKEEESKEEQ 163

[Close]

BLAST of Carg22995 vs. NCBI nr
Match: XP_023521159.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.8 bits (652), Expect = 2.5e-64
Identity = 152/165 (92.12%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPA-------VATATATAMAAPVAAEEKKEEESKEEQ 159
           MTAAT VPE A        ATAT TA AAP AAEEKKEEESKEEQ
Sbjct: 121 MTAATAVPEAAAATTAVVAATATVTATAAPAAAEEKKEEESKEEQ 165

[Close]

BLAST of Carg22995 vs. NCBI nr
Match: XP_022946135.1 (uncharacterized protein At2g34160-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63
Identity = 149/158 (94.30%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGM         EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGM---------EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 159
           MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ
Sbjct: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 149

[Close]

BLAST of Carg22995 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 85/113 (75.22%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 21  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 80
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 81  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATTVPEPAVA 134
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E A A
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAEA 126

[Close]

BLAST of Carg22995 vs. ExPASy TrEMBL
Match: A0A6J1G2Y0 (uncharacterized protein At2g34160-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450305 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 159
           MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ
Sbjct: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 158

[Close]

BLAST of Carg22995 vs. ExPASy TrEMBL
Match: A0A6J1KEC8 (uncharacterized protein At2g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493582 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.1e-65
Identity = 152/163 (93.25%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTP AAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPVAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAVAT-----ATATAMAAPVAAEEKKEEESKEEQ 159
           MTAAT VPE AVAT     ATAT  AAP AAEEKKEEESKEEQ
Sbjct: 121 MTAATVVPEAAVATTAVVAATATVTAAPAAAEEKKEEESKEEQ 163

[Close]

BLAST of Carg22995 vs. ExPASy TrEMBL
Match: A0A6J1G2Y2 (uncharacterized protein At2g34160-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450305 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.9e-64
Identity = 149/158 (94.30%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGM         EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGM---------EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 159
           MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ
Sbjct: 121 MTAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 149

[Close]

BLAST of Carg22995 vs. ExPASy TrEMBL
Match: A0A6J1KC55 (uncharacterized protein At2g34160 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493582 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.2e-58
Identity = 143/163 (87.73%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTP AAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPVAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120
           LGM         EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
Sbjct: 61  LGM---------EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL 120

Query: 121 MTAATTVPEPAVAT-----ATATAMAAPVAAEEKKEEESKEEQ 159
           MTAAT VPE AVAT     ATAT  AAP AAEEKKEEESKEEQ
Sbjct: 121 MTAATVVPEAAVATTAVVAATATVTAAPAAAEEKKEEESKEEQ 154

[Close]

BLAST of Carg22995 vs. ExPASy TrEMBL
Match: A0A0A0LG69 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.8e-52
Identity = 132/157 (84.08%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 2   ATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSAL 61
           AT+AVSGAT          ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSAL
Sbjct: 3   ATIAVSGAT---------PATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSAL 62

Query: 62  GMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLM 121
           GMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLM
Sbjct: 63  GMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLM 122

Query: 122 TAATTVPEPAVATATATAMAAPVAAEEKKEEESKEEQ 159
           TAAT VPE  VA A A       A EEKK EESKEEQ
Sbjct: 123 TAATAVPETVVAVAAA-------AEEEKKAEESKEEQ 143

[Close]

BLAST of Carg22995 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 171.4 bits (433), Expect = 5.8e-43
Identity = 108/158 (68.35%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 4   MAVSGATAAATPTPA-------------AAATETQKKNRIQVSNTKKPLFFYVNLAKRYI 63
           MA+  AT A  P P+              A  ET KKNRIQVSNTKKPLFFYVNLAKRYI
Sbjct: 1   MAMEVATPAPAPIPSERNIVLAPATTTTTATVETHKKNRIQVSNTKKPLFFYVNLAKRYI 60

Query: 64  QQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV 123
           QQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIV
Sbjct: 61  QQHNEVELSALGMAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIV 120

Query: 124 LGKSEKFDSLMTAATTVPEPAVATATATAMAAPVAAEE 149
           LGKS+KFDSL+   T    P    A+A   A+  A EE
Sbjct: 121 LGKSDKFDSLVPPVTNGKTPE-EEASAETEASVEAQEE 157

[Close]

BLAST of Carg22995 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 158.3 bits (399), Expect = 5.1e-39
Identity = 85/113 (75.22%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 21  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 80
           A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG 
Sbjct: 14  AVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGF 73

Query: 81  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATTVPEPAVA 134
           A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD LM AA    E A A
Sbjct: 74  AVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEEKEAAEA 126

[Close]

BLAST of Carg22995 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 85/113 (75.22%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 21  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 80
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 81  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATTVPEPAVA 134
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E A A
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDAEA 126

The following BLAST results are available for this feature:

BLAST of Carg22995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946134.1	5.2e-70	100.00	uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata] >KAG70303...	[more]
KAG6599323.1	8.6e-65	93.29	Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022999100.1	1.5e-64	93.25	uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima]	[more]
XP_023521159.1	2.5e-64	92.12	uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022946135.1	1.6e-63	94.30	uncharacterized protein At2g34160-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg22995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	1.6e-37	75.22	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of Carg22995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2Y0	2.5e-70	100.00	uncharacterized protein At2g34160-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KEC8	7.1e-65	93.25	uncharacterized protein At2g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1G2Y2	7.9e-64	94.30	uncharacterized protein At2g34160-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KC55	2.2e-58	87.73	uncharacterized protein At2g34160 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A0A0LG69	1.8e-52	84.08	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 S...	[more]

BLAST of Carg22995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	5.8e-43	68.35	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	5.1e-39	75.22	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	1.1e-38	75.22	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..153 e-value: 3.3E-63 score: 210.1
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 10..156
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 28..90 e-value: 3.7E-13 score: 49.1
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 26..134 e-value: 9.9E-53 score: 178.9
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 27..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..158
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 10..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22995-RA	Carg22995-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048235	pollen sperm cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding