Carg22931 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22931
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	epimerase family protein SDR39U1 homolog, chloroplastic-like
Location	Carg_Chr11: 5600443 .. 5605719 (-)
RNA-Seq Expression	Carg22931
Synteny	Carg22931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCTCTGGTGCCACTTCTTTCTCATGGAGCCGTACTGTCTCCCATTCTATTCGCATCCCTCAACACCTTGCAGTAAGTGTTCGATTCTCGTAATTTCATTTATTAGCTTTGCTTCGGCGTTGAAGAGTTTGTGGTTTCTCTGTTTTTCTTACTTTAAATTCTCTTTTTGCTTGAAGATATGTGGCAAGAGGCTTAAGGTTTTCTGCGCCATTGATGAAACAGAGATGGTATGTACTTACTTGAATTTCTGTGTTTATGCTTTATTGTGATTGAGAATTGTAATGTGTGTTAATTTGAAGTCAGTTTGTTGATCGTATTTCCTGTGTTTTATTATTGTTTTCCTATATTTTTGTAGCTATTTTTGTCATTGATCGTACAAAATTTATTGATTTTTCAAGGTTGACGTTTGGGGCTAGGTAATTTGAGATTTCGTAATGAAGCTCTATTGACTAAATGGTTGTGGCGGTTTCCATTGAAGTAGAAGTATGGTCCTTACTCTCTCTAGTGAGCCTTGGTTTGTGGGTTTATAGGCACTTTCTAGAGTTCTTCGAAGGCTATCTCTTGGGGCTTTCCCATCTTTTCTAATTCTGTGAAGTGCTCAGTTGGAGATGGTTCAAACACTCTAGTTTTTGGAGGACTACCGGTTGGGTGATTGTGAGATTCTACATCGGTTGGAGAGGAGAACGAAACATTACTTTATAAGGGTGTATGAACCTCTCCCTAATAGACGCGTTTTAAAATCGTGAGGCGCTACGTAACAGGCCAAAGTGGACAATACCTGCTAGCGGTGGGTGAGCTGTTACAAATGGTATAAGAGGTGGTCACCGGACGGTGCAAGAGGGCTAGACCTTCTCCATAGTAGATGCATTTTAAAACTATAAGGTTGACGACTATATGTAATGGCCAAAGCAGACAATATCTATTCCCTTCCTTGTACCCTCTTTCCTCCTTGAGGTTGTGGTTGTGTCCCATAGCTTGGTCTTTTAATTTTGGTTTTCATCCTCTTTCGAACAGGGAATCATATGAGTATCTGCTCTTTTTTCTTTATTGGGAGACTTCCATATTCATCCGACTAGATGGCGTATTCGTTTTTGGTTCCTTAATGCCTCATACGGGTTCCCTTGTTCATTTTTCGTTATTTCGGGTTGCCATTATGCTTCTAGAAATTCAAGGTTGAAATTTTGAAGGTCATTTTCTTAGTTAGATCTGTGGTTGGTTAGGTCCTATTTTTTTAGTTGTTTTTCAAGCCCTTTTGTGTTCTTTCATTTTGCTCTGCTCAATTTCTTGTTTAAAATAATTGTTGCAGAAAAATCAGCTCACTGTATCAATAACTGGAGCTACAGGCTTCATCGGTAGAAGACTTGTGCGACGGCTAAATGCAGGTTATTATATTCTATCGAGCTAAACATCTCGAAAAATCAAAGACATCAATCAAATCTTGCTCTTTTTTTTTTGACCCCATAGTTTGTATCTGTAAGCTTCCAGCTCCAATCTGCTTCTCACAATGTAGTAGATAAACGACTGATTAAGAATTCTTTGATGTGTTTCTGGTCATAGATAACCATAATATTCGAGTTCTGACACGTTCTAAATCTAAAGCTAAGTTGATTTTTCCGGGTAAGAAGGTAATACATGTCAATCGTCTTTCTTTGTTTTACTGTATCTTCTGAATCTTCTTCTGTTTAATTATTGAACTACATTCCACAATTTGTAGCCAGGGAATTTCCAGGAATCGTGATCGCAGAGGAGCCAGGGTGGAAAGACTGCATCCAAGGTTCAGATGGTGTTGTTAACTTGGCTGGGATGCCCATAAGTACCAGGTGGTCTTCTGAGGTTAGTACATATTTCCTATGGATTTTGACCCTTTCTAACATGATTTATGATCCCATATACTACACAAGCAAGTAATAAACTGTTCAGTTAAATACTACTTGCTTGTACGGTAATTAAAAACTAATCTTGGGATAGAGCTTAGATGAACCGTCTCGGTAGAATTAGATTCAGGACGTGCTTTTGGTCGGTTGATCTGACAGTTTGTAATTTGTATGTAAAACAACTAACATTATGTAATAGCTCAAGCCCACTTATAACAGATATTGTCCTCTTTGGGCTTTTCCTTTCGAGCTTTCCTCAAAGTTTTTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATGAAAGATGTTTCGTTCTCCCCAACCAATGTGGGATCTCACACACCCCCCTTCGGGGCCCAACATCTCCGCTGGCACTCGTTCCTTTCTCCAATCGATGTGGGACCCCCCTAATCCACCCTCTTTGGGGCCCAACGTCCTTTCTGGCACACGGCCTCATGTCCACCCCCTTGGGGGCTCAACCTTCTCGCTGGCACATCGCCCCGTGTCTGGTTTTGATACCATTTATAACCGCCCAAACCCGCCGCTAGTAGATATTGTTCTATTTGGACTTTTCCTTATGGGTTTCCTCTCAAGGTTTTTAAAACGCATCTACTAGGGAGAGATTTTCACACCCTTATAAAGCGTTCTCCTCAACCAAGGTATGATCTCACCCATTATCTCTTACCTTACTTGTTTGACAATCTGAGGACTGATCTCACCCATTATCTCTTACCCTACTTGTTTGACAATCTGAGGACTGGTTATATAATCTATAATATATAATTTGTGCCCATTGTAATGCAGATCAAGAAAGAGATAAAGCAAAGCAGGATCAGAGTCACCTCAAAGGTAAGAAGTATAGAGTACTGCAAACAGTTTAAGGGACTTCTTTCCATTTCTAGCTTACAAATGCAAAACCTGATACGTAGCAATATTCACTGCCTCGTTTACATGGTTACTTAACTGATGTGAAGGTTGTAAGGTTAATTAACAATGCACCAGATGCTGCTCGCCCTACCGTTCTTGTTAGCTCAACTGCTGTTGGTTACTACGGTACGTGCTTCTATCTACATTTACTCGACTCTCCCTCTCGAAAAACTATTTGAAAGAACAGATCACACTATTTTTATTTCGTTTTTTTTTCATCCTTTTCGTATTGGGACTGCCCAGTTTCTCAGTTTTGATGTGAGAATCATGTAATCTTCTATTGGATCACATTCATAATCTAAACTTTACTCCTTTTGCTCTCTCTCTCTCTCTCTCTCTCAGGCACAAGTGAAACAGCAATATTTGACGAACGAAGCCCGTCTGGAAACGATTACTTGGCCGAGGTGAGGAGAGCAGTTAGATAGAGCTAATTAACGAGCGATTTTATTTGTTTTTCTTCGTAAACGAAGATGAAAAGAGTTAAAGCACAATCTTTTGCTTGTGTTTAAACCAAATTTCCATCAATAATAGAGCATAGTGACAATTCTGGGTCCTTTTTTTAATCTTTTGTAGTTCAAGCTTGTGATGGGAACTGTTTGCCACAAGTATCTTAGATTGAGCTAGTAAAACTTATGTATCATTAAAATGGAGTCATGAAATTATACATGTTCCTGTAGTTCACTCGACCGTTCTCTAGTGCGAAGCGGTTTATCGACGAGTATTAAGATTTCCTTCTATTCGCCATATTGAAATTCTTCACTATTTTGTGTACTTTCATTCGGGTGTTTGTTTGCTTAAGACAGTGAGTTTCCAGGTTTGTAGGGAATGGGAAGCAACAGCCCTGGGAGTAAACAAGAATGTCAGAGTGGCTCTTATTCGTATAGGTGTTGTTCTTGGTAAAGAAGGTGGTGCTTTAGGTATGGAAAAATTCTTAATTATTAGGTTTAATTTGTTAGCTTTTTTTCCACTTTGTTCGAAAACATGTTTATTTTGGTCATTGTACTTTTTAAACGTTATCATTCTCGTCCTTTTGTTTTACATTTTATCTTTTTTTTTTTTTTAAATCTCAGTTTCAGCTTAATGCTCTCGATTAGTTTTTTTAAAAATTATCATACTTCTATGTTATAAGGATTACTTTTTCTAAAGATTCTCGTTCTAGGGACTAAAATAGAATAAACTTGAAAAAAATAGACAAAATAGACGATTATAAACAAAATAAAATATAAATTCAATTATTATATAGTTTGTTGAATCAGCTTTCCACATTAAATTACTTGAAGTTGAAAAGGTTTATGTTAATTTCTAAATCTTTTTTGAATCCATATTTATCTGTGTGCATTTGCCAGCCAAAATGATCCCCCTCTTCATGATGTATGCTGGAGGTCCAATGGGATCTGGAAAACAATGGTAATACTCTCCCCCAACACTCCATTATACATTCTTGTTACATTTTTTTTATTAAAGTTACAAATTTGATCCCTATAGTTACGAGATAATTCAAATCCCTACGATTTTGATATCAAACAAAACTATAGGGACTAATTTCTAAATTTTTTTAACAAAATATATATCTTTTTTTTTTTACTCAATAGTGAATTTTATAATAAAATGAGTTTGCAGGTTTTCCTGGATTCATTTGGACGACATTGTGGACCTAATATATGAAGCATTGATCAATCCATCTTATAAGGGTAATAAACTTTTAATTACAAAAGTAAAAAAAACGCAGAATTAGCCTTATTTAAAGTTAAATCATGTATTATTCATGGAAATGACACAGGTGTAATAAATGGAACGGCACCTAACCCGGTTAAATTGTCTGAATTATGTGAGCGGTTGGGAGCCGCCATGGGCAGACCTTCATGGCTTCCCGTACCTGACTTCGCCCTCAAAGCCGTCCTTGGAGATGGAGCTTCTGTGGTCACTCTCTCTCTCTCTCTTTTATCCCTTCCTTCTTTTTACTCCTTAAATTAATCTTATAAACCATAGGCCTCTATTAGAGAACCCTACAACTTCTTAGACAAGAAGTTCAAGCCAATTTGTTAGCCTCAGATCAATAAGAACACCTGAATTTCCTGCAGGTTTTGGAAGGGCAAAGGGTAGTGCCTGCCAGAGCCAAGGAATTGGGGTTTTCATTCAAGTACCCGTCTGTGAAAGACGCACTCAAGGCCATTCTTTCCTAAGGGAATCAAATATAAATCTGAAGAATAGTAGCATCATCTTCCATTTACATCTATATATATATCATAACACACTATTGACGAGGTCGATTTTTTGTTCAGTAATTTGATTTTTGGGTTTGGTTTCGGTTTCCCGCTCAAATGAAACGGAATGGGAAGGTCATAAATATATGATTGGGAGGTTTAAGGTATGTAGAAAGAAATTGGCTTTGTTTTTGTTCCAACCGTTCGGATTTATGCCCTGAAGCCTCATAATTAATTATTTAGTTTTTAACAATAACTTT

mRNA sequence

ATGGAGCTCTCTGGTGCCACTTCTTTCTCATGGAGCCGTACTGTCTCCCATTCTATTCGCATCCCTCAACACCTTGCAATATGTGGCAAGAGGCTTAAGGTTTTCTGCGCCATTGATGAAACAGAGATGAAAAATCAGCTCACTGTATCAATAACTGGAGCTACAGGCTTCATCGGTAGAAGACTTGTGCGACGGCTAAATGCAGATAACCATAATATTCGAGTTCTGACACGTTCTAAATCTAAAGCTAAGTTGATTTTTCCGGGTAAGAAGGTAATACATGTCAATCGTCTTTCTTTGTTTTACTCCAGGGAATTTCCAGGAATCGTGATCGCAGAGGAGCCAGGGTGGAAAGACTGCATCCAAGGTTCAGATGGTGTTGTTAACTTGGCTGGGATGCCCATAAGTACCAGGTGGTCTTCTGAGATCAAGAAAGAGATAAAGCAAAGCAGGATCAGAGTCACCTCAAAGGTTGTAAGGTTAATTAACAATGCACCAGATGCTGCTCGCCCTACCGTTCTTGTTAGCTCAACTGCTGTTGGTTACTACGGCACAAGTGAAACAGCAATATTTGACGAACGAAGCCCGTCTGGAAACGATTACTTGGCCGAGACAGTGAGTTTCCAGGTTTGTAGGGAATGGGAAGCAACAGCCCTGGGAGTAAACAAGAATGTCAGAGTGGCTCTTATTCGTATAGGTGTTGTTCTTGGTAAAGAAGGTGGTGCTTTAGCCAAAATGATCCCCCTCTTCATGATGTATGCTGGAGGTCCAATGGGATCTGGAAAACAATGGTTTTCCTGGATTCATTTGGACGACATTGTGGACCTAATATATGAAGCATTGATCAATCCATCTTATAAGGGTGTAATAAATGGAACGGCACCTAACCCGGTTAAATTGTCTGAATTATGTGAGCGGTTGGGAGCCGCCATGGGCAGACCTTCATGGCTTCCCGTACCTGACTTCGCCCTCAAAGCCGTCCTTGGAGATGGAGCTTCTGTGGTTTTGGAAGGGCAAAGGGTAGTGCCTGCCAGAGCCAAGGAATTGGGGTTTTCATTCAAGTACCCGTCTGTGAAAGACGCACTCAAGGCCATTCTTTCCTAAGGGAATCAAATATAAATCTGAAGAATAGTAGCATCATCTTCCATTTACATCTATATATATATCATAACACACTATTGACGAGGTCGATTTTTTGTTCAGTAATTTGATTTTTGGGTTTGGTTTCGGTTTCCCGCTCAAATGAAACGGAATGGGAAGGTCATAAATATATGATTGGGAGGTTTAAGGTATGTAGAAAGAAATTGGCTTTGTTTTTGTTCCAACCGTTCGGATTTATGCCCTGAAGCCTCATAATTAATTATTTAGTTTTTAACAATAACTTT

Coding sequence (CDS)

ATGGAGCTCTCTGGTGCCACTTCTTTCTCATGGAGCCGTACTGTCTCCCATTCTATTCGCATCCCTCAACACCTTGCAATATGTGGCAAGAGGCTTAAGGTTTTCTGCGCCATTGATGAAACAGAGATGAAAAATCAGCTCACTGTATCAATAACTGGAGCTACAGGCTTCATCGGTAGAAGACTTGTGCGACGGCTAAATGCAGATAACCATAATATTCGAGTTCTGACACGTTCTAAATCTAAAGCTAAGTTGATTTTTCCGGGTAAGAAGGTAATACATGTCAATCGTCTTTCTTTGTTTTACTCCAGGGAATTTCCAGGAATCGTGATCGCAGAGGAGCCAGGGTGGAAAGACTGCATCCAAGGTTCAGATGGTGTTGTTAACTTGGCTGGGATGCCCATAAGTACCAGGTGGTCTTCTGAGATCAAGAAAGAGATAAAGCAAAGCAGGATCAGAGTCACCTCAAAGGTTGTAAGGTTAATTAACAATGCACCAGATGCTGCTCGCCCTACCGTTCTTGTTAGCTCAACTGCTGTTGGTTACTACGGCACAAGTGAAACAGCAATATTTGACGAACGAAGCCCGTCTGGAAACGATTACTTGGCCGAGACAGTGAGTTTCCAGGTTTGTAGGGAATGGGAAGCAACAGCCCTGGGAGTAAACAAGAATGTCAGAGTGGCTCTTATTCGTATAGGTGTTGTTCTTGGTAAAGAAGGTGGTGCTTTAGCCAAAATGATCCCCCTCTTCATGATGTATGCTGGAGGTCCAATGGGATCTGGAAAACAATGGTTTTCCTGGATTCATTTGGACGACATTGTGGACCTAATATATGAAGCATTGATCAATCCATCTTATAAGGGTGTAATAAATGGAACGGCACCTAACCCGGTTAAATTGTCTGAATTATGTGAGCGGTTGGGAGCCGCCATGGGCAGACCTTCATGGCTTCCCGTACCTGACTTCGCCCTCAAAGCCGTCCTTGGAGATGGAGCTTCTGTGGTTTTGGAAGGGCAAAGGGTAGTGCCTGCCAGAGCCAAGGAATTGGGGTTTTCATTCAAGTACCCGTCTGTGAAAGACGCACTCAAGGCCATTCTTTCCTAA

Protein sequence

MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGRRLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDCIQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAVGYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEGGALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKLSELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKDALKAILS

Homology

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BLAST of Carg22931 vs. NCBI nr
Match: KAG7022257.1 (Epimerase family protein SDR39U1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 732.3 bits (1889), Expect = 2.1e-207
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR
Sbjct: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC
Sbjct: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD
Sbjct: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 367

[Close]

BLAST of Carg22931 vs. NCBI nr
Match: KAG6588414.1 (Epimerase family protein SDR39U1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 675.6 bits (1742), Expect = 2.4e-190
Identity = 346/367 (94.28%), Postives = 347/367 (94.55%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           MELSGATS SWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR
Sbjct: 1   MELSGATSLSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLVRRLNADNHNIRVLTRSKSKAKLIFP              +REFPGIVIAEEPGWKDC
Sbjct: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFP--------------AREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAE     VCREWEATALGVNKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAE-----VCREWEATALGVNKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD
Sbjct: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 348

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 348

[Close]

BLAST of Carg22931 vs. NCBI nr
Match: XP_022924930.1 (epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 674.1 bits (1738), Expect = 6.9e-190
Identity = 345/367 (94.01%), Postives = 347/367 (94.55%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           MELSGA+S SWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR
Sbjct: 1   MELSGASSLSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLVRRLNADNHNIRVLTRSKSKAKLIFP              +REFPGIVIAEEPGWKDC
Sbjct: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFP--------------AREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAE     VCREWEATALGVNKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAE-----VCREWEATALGVNKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD
Sbjct: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 348

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 348

[Close]

BLAST of Carg22931 vs. NCBI nr
Match: XP_023530645.1 (epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 673.7 bits (1737), Expect = 9.0e-190
Identity = 345/367 (94.01%), Postives = 347/367 (94.55%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           MELSGATS SWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR
Sbjct: 1   MELSGATSLSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLVRRLNADNHNIRVLTRSKSKAKLIFP              +REFPGIVIAEEPGWKDC
Sbjct: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFP--------------AREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLIN+APDAARPTVLVSSTAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINDAPDAARPTVLVSSTAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAE     VCREWEATALGVNKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAE-----VCREWEATALGVNKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD
Sbjct: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 348

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 348

[Close]

BLAST of Carg22931 vs. NCBI nr
Match: XP_022971004.1 (epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 661.8 bits (1706), Expect = 3.5e-186
Identity = 340/367 (92.64%), Postives = 346/367 (94.28%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           M+LSGATS SWSRTVSHSIRIPQHLAICGKRL+VFCAIDETEMKNQLTVSITGATGFIGR
Sbjct: 1   MKLSGATSLSWSRTVSHSIRIPQHLAICGKRLQVFCAIDETEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLVRRLNADNHNIRVLTRSKSKA+LIFP              +REFPGIVIAEEPGWKDC
Sbjct: 61  RLVRRLNADNHNIRVLTRSKSKAELIFP--------------AREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAE     VCREWEATALGVNKNVRVALIRIGVVLGK G
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAE-----VCREWEATALGVNKNVRVALIRIGVVLGK-G 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMMYAGGP+GSGKQWFSWIHLDDIVDLIYEAL+NPSYKGVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFMMYAGGPLGSGKQWFSWIHLDDIVDLIYEALMNPSYKGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD
Sbjct: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 347

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 347

[Close]

BLAST of Carg22931 vs. ExPASy Swiss-Prot
Match: Q9SJU9 (Epimerase family protein SDR39U1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GC1 PE=2 SV=2)

HSP 1 Score: 494.2 bits (1271), Expect = 1.3e-138
Identity = 251/365 (68.77%), Postives = 296/365 (81.10%), Query Frame = 0


Query: 3   LSGATSFSWSRTVSHSIRIPQHLAICG-KRLKVFCAIDETEMKNQLTVSITGATGFIGRR 62
           L   TS S S  +S ++ +P+  ++ G +R  V C+   ++ ++Q+TVS+TGATGFIGRR
Sbjct: 4   LCSPTSLSSSFALSSALLVPRSFSMPGTRRFMVLCS---SQKESQMTVSVTGATGFIGRR 63

Query: 63  LVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDCI 122
           LV+RL ADNH IRVLTRSKSKA+ IFP K              +FPGIVIAEE  WK+C+
Sbjct: 64  LVQRLRADNHAIRVLTRSKSKAEQIFPAK--------------DFPGIVIAEESEWKNCV 123

Query: 123 QGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAVG 182
           QGS  VVNLAG+PISTRWS EIKKEIK SRIRVTSKVV LINN+P  ARPTVLVS+TAVG
Sbjct: 124 QGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNSPAEARPTVLVSATAVG 183

Query: 183 YYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEGG 242
           YYGTSET +FDE SPSG DYLAE     VCREWE TAL  NK+VRVALIRIGVVLGK+GG
Sbjct: 184 YYGTSETGVFDENSPSGKDYLAE-----VCREWEGTALKANKDVRVALIRIGVVLGKDGG 243

Query: 243 ALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKLS 302
           ALA MIP F M+AGGP+GSG+QWFSWIH+DD+V+LIYEAL NPSYKGVINGTAPNPV+L 
Sbjct: 244 ALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVINGTAPNPVRLG 303

Query: 303 ELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKDA 362
           E+C++LG+ + RPSWLPVPDFALKA+LG+GA+VVLEGQ+V+P RAKELGF FKY  VKDA
Sbjct: 304 EMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVRAKELGFEFKYKYVKDA 346

Query: 363 LKAIL 367
           L+AI+
Sbjct: 364 LRAIM 346

[Close]

BLAST of Carg22931 vs. ExPASy Swiss-Prot
Match: P73467 (Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1223 PE=3 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 7.1e-73
Identity = 147/322 (45.65%), Postives = 200/322 (62.11%), Query Frame = 0


Query: 47  LTVSITGATGFIGRRLVRRLNADNHNIRVLTRSKSKAKLIF-PGKKVIHVNRLSLFYSRE 106
           + + +TGATGF+G  LV  L+   H + +L RS SKA+ +F PG           F   +
Sbjct: 1   MKIILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGS----------FPQLK 60

Query: 107 FPGIVIAEEPGWKDCIQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNA 166
                  +   W+  + G D V+NLAG PIS RW+   K EI  SR   T K+V  I  A
Sbjct: 61  AIAYEATKSGDWQKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKA 120

Query: 167 PDAARPTVLVSSTAVGYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNK-N 226
               +P V++S +A+GYYGTSETA F E S  G+D+LAE     VC+ WE  A  V +  
Sbjct: 121 D--RKPQVMISGSAIGYYGTSETATFTESSKPGDDFLAE-----VCQAWENAAHQVEQLG 180

Query: 227 VRVALIRIGVVLGKEGGALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINP 286
           VR+ + RIG+VLG +GGALAKM+P F ++AGGP+GSG+QWFSWI   D++ LI +AL + 
Sbjct: 181 VRLVVFRIGIVLGADGGALAKMLPPFKLFAGGPLGSGEQWFSWIDRRDLIALIDKALTDS 240

Query: 287 SYKGVINGTAPNPVKLSELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPA 346
           + +G  N TAPNPVK+ E C  LG  + RPSWLPVPD AL+ +LG+GA +VLEGQ V+P 
Sbjct: 241 TLRGTYNATAPNPVKMKEFCHTLGKVLARPSWLPVPDIALELLLGEGAKLVLEGQEVLPG 300

Query: 347 RAKELGFSFKYPSVKDALKAIL 367
              +  F F+ P ++ +L+ IL
Sbjct: 301 AISKTDFQFQAPDLETSLRQIL 305

[Close]

BLAST of Carg22931 vs. ExPASy Swiss-Prot
Match: P77775 (Epimerase family protein YfcH OS=Escherichia coli (strain K12) OX=83333 GN=yfcH PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-49
Identity = 118/322 (36.65%), Postives = 180/322 (55.90%), Query Frame = 0


Query: 47  LTVSITGATGFIGRRLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREF 106
           + + ITG TG IGR L+ RL    H I V+TR+  KA  +                    
Sbjct: 1   MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLG------------------ 60

Query: 107 PGIVIAEEPGWKDCIQGSDGVVNLAGMPIS-TRWSSEIKKEIKQSRIRVTSKVVRLINNA 166
           P + + +    +  + G D V+NLAG PI+  RW+ E K+ + QSR  +T K+V LI NA
Sbjct: 61  PRVTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLI-NA 120

Query: 167 PDAARPTVLVSSTAVGYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKN- 226
            D   P+VL+S +A GYYG     +  E  P  N++     + ++C  WE  A     + 
Sbjct: 121 SDTP-PSVLISGSATGYYGDLGEVVVTEEEPPHNEF-----THKLCARWEEIACRAQSDK 180

Query: 227 VRVALIRIGVVLGKEGGALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINP 286
            RV L+R GVVL  +GG L KM+P F +  GGP+GSG+Q+ +WIH+DD+V+ I   L N 
Sbjct: 181 TRVCLLRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN- 240

Query: 287 SYKGVINGTAPNPVKLSELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPA 346
             +G  N  +P PV+  +    LG A+ RP+ L VP  A++ ++G+ + +VL GQR +P 
Sbjct: 241 ELRGPFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPK 296

Query: 347 RAKELGFSFKYPSVKDALKAIL 367
           R +E GF+F++  +++AL  ++
Sbjct: 301 RLEEAGFAFRWYDLEEALADVV 296

[Close]

BLAST of Carg22931 vs. ExPASy Swiss-Prot
Match: Q5M8N4 (Epimerase family protein SDR39U1 OS=Mus musculus OX=10090 GN=Sdr39u1 PE=1 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-44
Identity = 113/326 (34.66%), Postives = 176/326 (53.99%), Query Frame = 0


Query: 47  LTVSITGATGFIGRRLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREF 106
           + V + G TGFIG  + + L    H +++++R         PG   I  + LS       
Sbjct: 1   MRVLVGGGTGFIGTAVTQLLRGRGHEVKLVSRQ--------PGPGRITWSELS------- 60

Query: 107 PGIVIAEEPGWKDCIQGSDGVVNLAGMPIST---RWSSEIKKEIKQSRIRVTSKVVRLIN 166
                  E G   C    D V+NLAG  I     RW+   +KE+  SR+  T  + + I 
Sbjct: 61  -------ESGLPLC----DVVINLAGENILNPLRRWNETFQKEVLTSRLDTTHLLAKAIT 120

Query: 167 NAPDAARPTVLVSSTAVGYYGTSETAIFDERSPSGN-DYLAETVSFQVCREWEATALGVN 226
                 +  +LV  T V YY  S T  +DE SP GN D+ +  V+     +WEA A    
Sbjct: 121 ETAHPPQAWILV--TGVAYYQPSLTKEYDEDSPGGNFDFFSNLVT-----KWEAAARLPG 180

Query: 227 KNVRVALIRIGVVLGKEGGALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALI 286
           ++ R  ++R GVVLG+ GGA++ M+  F +  GGP+GSG+Q+F WIH+ D+  ++  AL 
Sbjct: 181 ESTRQVVVRSGVVLGRGGGAISHMLLPFRLGLGGPIGSGRQFFPWIHIGDLAGILNYALE 240

Query: 287 NPSYKGVINGTAP-NPVKLSELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRV 346
               +GV+NG AP +    +E  + LGAA+GRP+++PVP   ++AV G+ A ++LEGQ+V
Sbjct: 241 ANHVQGVLNGVAPASTTTNAEFAQALGAALGRPAFIPVPSTVVRAVFGERAIMLLEGQKV 293

Query: 347 VPARAKELGFSFKYPSVKDALKAILS 368
           VP R    G+ + +P ++ ALK +++
Sbjct: 301 VPRRTLATGYQYSFPELRAALKDVVA 293

[Close]

BLAST of Carg22931 vs. ExPASy Swiss-Prot
Match: Q9NRG7 (Epimerase family protein SDR39U1 OS=Homo sapiens OX=9606 GN=SDR39U1 PE=1 SV=3)

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-44
Identity = 116/329 (35.26%), Postives = 172/329 (52.28%), Query Frame = 0


Query: 47  LTVSITGATGFIGRRLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREF 106
           + V + G TGFIG  L + LNA  H + +++R         PG                 
Sbjct: 1   MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRK--------PG----------------- 60

Query: 107 PGIVIAEE---PGWKDCIQGSDGVVNLAGMPIST---RWSSEIKKEIKQSRIRVTSKVVR 166
           PG +  +E    G   C    D  VNLAG  I     RW+   +KE+  SR+  T  + +
Sbjct: 61  PGRITWDELAASGLPSC----DAAVNLAGENILNPLRRWNETFQKEVIGSRLETTQLLAK 120

Query: 167 LINNAPDAARPTVLVSSTAVGYYGTSETAIFDERSPSGN-DYLAETVSFQVCREWEATAL 226
            I  AP   +  VLV  T V YY  S TA +DE SP G+ D+ +  V+     +WEA A 
Sbjct: 121 AITKAPQPPKAWVLV--TGVAYYQPSLTAEYDEDSPGGDFDFFSNLVT-----KWEAAAR 180

Query: 227 GVNKNVRVALIRIGVVLGKEGGALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYE 286
               + R  ++R GVVLG+ GGA+  M+  F +  GGP+GSG Q+F WIH+ D+  ++  
Sbjct: 181 LPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTH 240

Query: 287 ALINPSYKGVINGTAPNPVKLSELCERLGAAMGRPSWLPVPDFALKAVLG-DGASVVLEG 346
           AL      GV+NG AP+    +E  + LGAA+GR +++P+P   ++AV G   A ++LEG
Sbjct: 241 ALEANHVHGVLNGVAPSSATNAEFAQTLGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEG 293

Query: 347 QRVVPARAKELGFSFKYPSVKDALKAILS 368
           Q+V+P R    G+ + +P +  ALK I++
Sbjct: 301 QKVIPQRTLATGYQYSFPELGAALKEIVA 293

[Close]

BLAST of Carg22931 vs. ExPASy TrEMBL
Match: A0A6J1EGF9 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432329 PE=3 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.3e-190
Identity = 345/367 (94.01%), Postives = 347/367 (94.55%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           MELSGA+S SWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR
Sbjct: 1   MELSGASSLSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLVRRLNADNHNIRVLTRSKSKAKLIFP              +REFPGIVIAEEPGWKDC
Sbjct: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFP--------------AREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAE     VCREWEATALGVNKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAE-----VCREWEATALGVNKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD
Sbjct: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 348

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 348

[Close]

BLAST of Carg22931 vs. ExPASy TrEMBL
Match: A0A6J1I7C1 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111469802 PE=3 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.7e-186
Identity = 340/367 (92.64%), Postives = 346/367 (94.28%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           M+LSGATS SWSRTVSHSIRIPQHLAICGKRL+VFCAIDETEMKNQLTVSITGATGFIGR
Sbjct: 1   MKLSGATSLSWSRTVSHSIRIPQHLAICGKRLQVFCAIDETEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLVRRLNADNHNIRVLTRSKSKA+LIFP              +REFPGIVIAEEPGWKDC
Sbjct: 61  RLVRRLNADNHNIRVLTRSKSKAELIFP--------------AREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAE     VCREWEATALGVNKNVRVALIRIGVVLGK G
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAE-----VCREWEATALGVNKNVRVALIRIGVVLGK-G 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMMYAGGP+GSGKQWFSWIHLDDIVDLIYEAL+NPSYKGVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFMMYAGGPLGSGKQWFSWIHLDDIVDLIYEALMNPSYKGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD
Sbjct: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 347

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 347

[Close]

BLAST of Carg22931 vs. ExPASy TrEMBL
Match: A0A6J1GNA8 (epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455484 PE=3 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 2.0e-174
Identity = 312/367 (85.01%), Postives = 333/367 (90.74%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           M+  GA SFSW+RTVSHSIRIPQH+AICGKR + FCAID TEMKNQLTVSITGATGFIGR
Sbjct: 1   MKTPGAISFSWTRTVSHSIRIPQHVAICGKRFRAFCAIDATEMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLV+RL+ DNHNIRVLTRSKSKA+LIFP              +REFPGIVIAEEPGWKDC
Sbjct: 61  RLVQRLHTDNHNIRVLTRSKSKAELIFP--------------AREFPGIVIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAG+PISTRWS EIKKEIKQSRIRVTSKVV LIN+APD ARPTVLVS+TAV
Sbjct: 121 IQGSDGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVSLINDAPDVARPTVLVSATAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETAIFDERSPSGNDYLAE     VCREWEATALG NKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETAIFDERSPSGNDYLAE-----VCREWEATALGANKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLF ++AGGP+GSG+QWFSWIHLDDIV+LIYEAL NPSY GVINGTAPNPVKL
Sbjct: 241 GALAKMIPLFNLFAGGPLGSGRQWFSWIHLDDIVNLIYEALTNPSYNGVINGTAPNPVKL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
           +ELCERLGAAMGRPSWLPVPDFALKAVLG+GASVVLEGQRVVP RAKELGF+FKYP+VK+
Sbjct: 301 AELCERLGAAMGRPSWLPVPDFALKAVLGEGASVVLEGQRVVPTRAKELGFTFKYPTVKE 348

Query: 361 ALKAILS 368
           ALKAILS
Sbjct: 361 ALKAILS 348

[Close]

BLAST of Carg22931 vs. ExPASy TrEMBL
Match: A0A1S3BBD1 (epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488077 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.3e-174
Identity = 314/367 (85.56%), Postives = 333/367 (90.74%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           M+L  A SFSWSRTVSHS+RIPQHLAICG R +VFC ID T+MKNQLTVSITGATGFIGR
Sbjct: 1   MDLPPAISFSWSRTVSHSLRIPQHLAICGNRCRVFCVIDATKMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLV+RL+AD HNIRVLTRSKSKA+LIFP              +REFPGI+IAEEPGWKDC
Sbjct: 61  RLVQRLHADKHNIRVLTRSKSKAELIFP--------------AREFPGIMIAEEPGWKDC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVV LIN+APDAARPTVLVS+TAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVSLINDAPDAARPTVLVSATAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETA FDERSPSGNDYLAE     VCREWEATALGVNKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETATFDERSPSGNDYLAE-----VCREWEATALGVNKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMM+AGGP+GSGKQWFSWIHLDDIV+LIYEALINPSY+GVINGTAPNPV L
Sbjct: 241 GALAKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEALINPSYQGVINGTAPNPVTL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
            ELC+ LGA MGRPSWLPVPDFALKAVLG+GASVVLEGQRVVP RAKELGFS+KYPSVKD
Sbjct: 301 GELCKGLGAEMGRPSWLPVPDFALKAVLGEGASVVLEGQRVVPTRAKELGFSYKYPSVKD 348

Query: 361 ALKAILS 368
           ALK+ILS
Sbjct: 361 ALKSILS 348

[Close]

BLAST of Carg22931 vs. ExPASy TrEMBL
Match: A0A0A0K2D2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006290 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.7e-174
Identity = 313/367 (85.29%), Postives = 334/367 (91.01%), Query Frame = 0


Query: 1   MELSGATSFSWSRTVSHSIRIPQHLAICGKRLKVFCAIDETEMKNQLTVSITGATGFIGR 60
           M+L  A SFSWSRTVSHS+RIPQHLAICG R +VFCAID T+MKNQLTVSITGATGFIGR
Sbjct: 1   MDLPPAISFSWSRTVSHSLRIPQHLAICGNRFRVFCAIDATKMKNQLTVSITGATGFIGR 60

Query: 61  RLVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDC 120
           RLV+RL+AD HNIRVLTRSKSKA+LIFP              +REFPGI+IAEEPGWK+C
Sbjct: 61  RLVQRLHADKHNIRVLTRSKSKAELIFP--------------AREFPGIMIAEEPGWKNC 120

Query: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAV 180
           IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVV LIN+APDAARPTVLVS+TAV
Sbjct: 121 IQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVSLINDAPDAARPTVLVSATAV 180

Query: 181 GYYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEG 240
           GYYGTSETA FDERSPSGNDYLA     QVCREWEATALGVNKNVRVALIRIGVVLGKEG
Sbjct: 181 GYYGTSETATFDERSPSGNDYLA-----QVCREWEATALGVNKNVRVALIRIGVVLGKEG 240

Query: 241 GALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKL 300
           GALAKMIPLFMM+AGGP+GSGKQWFSWIHLDDIV+LIYEALINPSY+GVINGTAPNPV L
Sbjct: 241 GALAKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEALINPSYQGVINGTAPNPVTL 300

Query: 301 SELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKD 360
            ELC+ LGA MGRPSWLPVPDFALKAVLG+GASVVLEGQ+VVP RAKELGFS+KYPSVKD
Sbjct: 301 GELCKGLGAEMGRPSWLPVPDFALKAVLGEGASVVLEGQKVVPTRAKELGFSYKYPSVKD 348

Query: 361 ALKAILS 368
           ALK+ILS
Sbjct: 361 ALKSILS 348

[Close]

BLAST of Carg22931 vs. TAIR 10
Match: AT2G21280.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 494.2 bits (1271), Expect = 9.1e-140
Identity = 251/365 (68.77%), Postives = 296/365 (81.10%), Query Frame = 0


Query: 3   LSGATSFSWSRTVSHSIRIPQHLAICG-KRLKVFCAIDETEMKNQLTVSITGATGFIGRR 62
           L   TS S S  +S ++ +P+  ++ G +R  V C+   ++ ++Q+TVS+TGATGFIGRR
Sbjct: 4   LCSPTSLSSSFALSSALLVPRSFSMPGTRRFMVLCS---SQKESQMTVSVTGATGFIGRR 63

Query: 63  LVRRLNADNHNIRVLTRSKSKAKLIFPGKKVIHVNRLSLFYSREFPGIVIAEEPGWKDCI 122
           LV+RL ADNH IRVLTRSKSKA+ IFP K              +FPGIVIAEE  WK+C+
Sbjct: 64  LVQRLRADNHAIRVLTRSKSKAEQIFPAK--------------DFPGIVIAEESEWKNCV 123

Query: 123 QGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVRLINNAPDAARPTVLVSSTAVG 182
           QGS  VVNLAG+PISTRWS EIKKEIK SRIRVTSKVV LINN+P  ARPTVLVS+TAVG
Sbjct: 124 QGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNSPAEARPTVLVSATAVG 183

Query: 183 YYGTSETAIFDERSPSGNDYLAETVSFQVCREWEATALGVNKNVRVALIRIGVVLGKEGG 242
           YYGTSET +FDE SPSG DYLAE     VCREWE TAL  NK+VRVALIRIGVVLGK+GG
Sbjct: 184 YYGTSETGVFDENSPSGKDYLAE-----VCREWEGTALKANKDVRVALIRIGVVLGKDGG 243

Query: 243 ALAKMIPLFMMYAGGPMGSGKQWFSWIHLDDIVDLIYEALINPSYKGVINGTAPNPVKLS 302
           ALA MIP F M+AGGP+GSG+QWFSWIH+DD+V+LIYEAL NPSYKGVINGTAPNPV+L 
Sbjct: 244 ALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVINGTAPNPVRLG 303

Query: 303 ELCERLGAAMGRPSWLPVPDFALKAVLGDGASVVLEGQRVVPARAKELGFSFKYPSVKDA 362
           E+C++LG+ + RPSWLPVPDFALKA+LG+GA+VVLEGQ+V+P RAKELGF FKY  VKDA
Sbjct: 304 EMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVRAKELGFEFKYKYVKDA 346

Query: 363 LKAIL 367
           L+AI+
Sbjct: 364 LRAIM 346

The following BLAST results are available for this feature:

BLAST of Carg22931 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022257.1	2.1e-207	100.00	Epimerase family protein SDR39U1-like, chloroplastic, partial [Cucurbita argyros...	[more]
KAG6588414.1	2.4e-190	94.28	Epimerase family protein SDR39U1-like, chloroplastic, partial [Cucurbita argyros...	[more]
XP_022924930.1	6.9e-190	94.01	epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita moschata...	[more]
XP_023530645.1	9.0e-190	94.01	epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita pepo sub...	[more]
XP_022971004.1	3.5e-186	92.64	epimerase family protein SDR39U1 homolog, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Carg22931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJU9	1.3e-138	68.77	Epimerase family protein SDR39U1 homolog, chloroplastic OS=Arabidopsis thaliana ...	[more]
P73467	7.1e-73	45.65	Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
P77775	1.4e-49	36.65	Epimerase family protein YfcH OS=Escherichia coli (strain K12) OX=83333 GN=yfcH ...	[more]
Q5M8N4	1.8e-44	34.66	Epimerase family protein SDR39U1 OS=Mus musculus OX=10090 GN=Sdr39u1 PE=1 SV=2	[more]
Q9NRG7	3.1e-44	35.26	Epimerase family protein SDR39U1 OS=Homo sapiens OX=9606 GN=SDR39U1 PE=1 SV=3	[more]

BLAST of Carg22931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGF9	3.3e-190	94.01	epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1I7C1	1.7e-186	92.64	epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucurbita maxima...	[more]
A0A6J1GNA8	2.0e-174	85.01	epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X2 OS=Cucur...	[more]
A0A1S3BBD1	3.3e-174	85.56	epimerase family protein SDR39U1 homolog, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A0A0K2D2	5.7e-174	85.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006290 PE=3 SV=1	[more]

BLAST of Carg22931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21280.1	9.1e-140	68.77	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 49..367 e-value: 2.3E-73 score: 249.3
None	No IPR available	PANTHER	PTHR11092	SUGAR NUCLEOTIDE EPIMERASE RELATED	coord: 45..366
None	No IPR available	CDD	cd05242	SDR_a8	coord: 48..366 e-value: 3.62737E-128 score: 367.709
IPR010099	Epimerase family protein SDR39U1	TIGRFAM	TIGR01777	TIGR01777	coord: 49..362 e-value: 3.2E-100 score: 333.4
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 50..284 e-value: 6.3E-16 score: 58.6
IPR013549	Domain of unknown function DUF1731	PFAM	PF08338	DUF1731	coord: 319..365 e-value: 3.1E-19 score: 68.5
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 42..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22931-RA	Carg22931-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity