Carg22909 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22909
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	thioredoxin H2-like
Location	Carg_Chr11: 5449943 .. 5451076 (+)
RNA-Seq Expression	Carg22909
Synteny	Carg22909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTTCTTTTCTCAACGATCGGCACTCTTGTTTCTAAATGGTTCGGCCCCTCAACGGCGAGTGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTCTTCTTTTCATTCGTCGGCTAGATGGAAACTCCACTTCGATTCCGTTCAGGAATCCTCCAAGCTCGTAAGAATCAATTTTACCTTTTCCATTGCCAGTCGTTTGATTGAAAGGATTTTTTTTCTAGGACTACTGTTGAGCGGTGATATGATTTTGTCTCTTCCTTGAATTTTTTGCGACTGTTGGAGAGTAGATGGTGATTGATTTCTCGGCGACTTGGTGTGGACCTTGTAGGCTGATGGAGCCGTCCTTCAACGCCATGGCCAGTACATATACTGATGTTGAGTTCATCAAAATCGATGTCGACGAGTTATCTGTATGTCTTTCTACTTCTAATTTGGCATTCCTTGTTTCTGTAGCCGATTCTTAATTGCAATTGTTCCTAATTATAAATTTTGGTGGTTGATGTTAGGGTGTTCGTCAGTTTAGTCTCTGTTGCTTTAATAATATCCTTCTGTTTGCCTATGTTGAAATTGACTGATAGTAGTTAGTTATCATAAGCTTAGAAGAGGAATTGGGCATATAAGAGTGAAAAATTTGCAATTTCTGCTAATTTCTTAGAAGCTTGGAGTCGAAATACGAAACTTTTCTCTCTGAATAGGTATGATATCATGTAAGTTCATCATAGACACTTGGAGGAGTTACTTATGGAAATGATATTATTGCAAATTATGCCATCGTAGCTCCTGCTCACAGCTCAACCTATGTATCCTCAATTAAAATGTTAGAGATTTGAATCTCCATCCCAACATGTTATTGAATTCTAGAATAATATTCAAACATAATTTGCTAGATTGAATCTTTTTGACACGGACTAAAGTGAAAAAATGACAAAGAAATTTACCCTGAATCCAATTGTAAGAATGACACGAGTGTCTCTGTAATCAGGATGTAGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTATTGCTGAGGAGAGGGAAAGTGTTGGATACGGTGGTTGGAGCACGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTGGAACTTAA

mRNA sequence

ATGGGAGTTCTTTTCTCAACGATCGGCACTCTTGTTTCTAAATGGTTCGGCCCCTCAACGGCGAGTGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTCTTCTTTTCATTCGTCGGCTAGATGGAAACTCCACTTCGATTCCGTTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCGGCGACTTGGTGTGGACCTTGTAGGCTGATGGAGCCGTCCTTCAACGCCATGGCCAGTACATATACTGATGTTGAGTTCATCAAAATCGATGTCGACGAGTTATCTGATGTAGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTATTGCTGAGGAGAGGGAAAGTGTTGGATACGGTGGTTGGAGCACGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTGGAACTTAA

Coding sequence (CDS)

ATGGGAGTTCTTTTCTCAACGATCGGCACTCTTGTTTCTAAATGGTTCGGCCCCTCAACGGCGAGTGCCGAAGCTGCCTCGTCGGAGCCGTCGTCGGTGTCTTCTTTTCATTCGTCGGCTAGATGGAAACTCCACTTCGATTCCGTTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCGGCGACTTGGTGTGGACCTTGTAGGCTGATGGAGCCGTCCTTCAACGCCATGGCCAGTACATATACTGATGTTGAGTTCATCAAAATCGATGTCGACGAGTTATCTGATGTAGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTATTGCTGAGGAGAGGGAAAGTGTTGGATACGGTGGTTGGAGCACGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTGGAACTTAA

Protein sequence

MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT

Homology

[Close]

BLAST of Carg22909 vs. NCBI nr
Match: XP_022928736.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023531187.1 thioredoxin H2-like isoform X3 [Cucurbita pepo subsp. pepo] >KAG6588389.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022236.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASGGT 145
           TVVGARKEELEKKIQKHRSASGGT
Sbjct: 121 TVVGARKEELEKKIQKHRSASGGT 144

[Close]

BLAST of Carg22909 vs. NCBI nr
Match: XP_022971509.1 (thioredoxin H2-like [Cucurbita maxima])

HSP 1 Score: 278.9 bits (712), Expect = 2.5e-71
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVLFSTIGTL+SKWFGPS ASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLLSKWFGPSMASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASGGT 145
           TVVGARKEELEKKIQKHRSASGGT
Sbjct: 121 TVVGARKEELEKKIQKHRSASGGT 144

[Close]

BLAST of Carg22909 vs. NCBI nr
Match: XP_038903635.1 (thioredoxin H2 [Benincasa hispida])

HSP 1 Score: 250.4 bits (638), Expect = 9.6e-63
Identity = 126/142 (88.73%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVL S IG L+S WFGP TASAEAASSEPSSV SFHSSARW+LH++S QESSKLMVIDF
Sbjct: 1   MGVLLSRIGVLLSNWFGPPTASAEAASSEPSSVLSFHSSARWQLHYNSAQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQ FGVQAMPTFVLLR+GKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQHFGVQAMPTFVLLRKGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Carg22909 vs. NCBI nr
Match: XP_008443435.2 (PREDICTED: thioredoxin H2 [Cucumis melo] >TYK25664.1 thioredoxin H2 [Cucumis melo var. makuwa])

HSP 1 Score: 245.4 bits (625), Expect = 3.1e-61
Identity = 122/144 (84.72%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVL S IG L+S WFGP TA+AEAASSEPSSV SFHSSARW+LHF+SVQE+SKLMVIDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEP+FNAMAS YTDVEF KIDVDEL+DVAQ FGVQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASGGT 145
           TVVGARKEELEKKI+KHRS SG T
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

[Close]

BLAST of Carg22909 vs. NCBI nr
Match: XP_023531185.1 (thioredoxin H2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 6.9e-61
Identity = 133/155 (85.81%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKL+ I+F
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLVRINF 60

Query: 61  SATWCGPC-----------RLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPT 120
           + +                RLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPT
Sbjct: 61  TFSIASRLIEGVFSRTTVDRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPT 120

Query: 121 FVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT 145
           FVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT
Sbjct: 121 FVLLRRGKVLDTVVGARKEELEKKIQKHRSASGGT 155

[Close]

BLAST of Carg22909 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 6.5e-38
Identity = 74/133 (55.64%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 8   IGTLVSKWFGP-STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCG 67
           +G  +S  FG    A+A    SEPS V  F SSARW+LHF+ ++ES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA  + DV+F+K+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

[Close]

BLAST of Carg22909 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 65/129 (50.39%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 19  STASAEAASSE---PSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSF 78
           ST+  + A+ E    S+V + HS A+W   +D+ + ++KL+VIDFSA+WCGPC++MEP F
Sbjct: 6   STSKPKPAAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVF 65

Query: 79  NAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQ 138
             MA  +TDV F+K+DVDEL++VA+ + V+AMPTFVL R G+ +  +VGA K+ELEK I 
Sbjct: 66  KEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTIN 125

Query: 139 KHRSASGGT 145
             RS+S  T
Sbjct: 126 TLRSSSSST 134

[Close]

BLAST of Carg22909 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26
Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 8   IGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQES-SKLMVIDFSATWCG 67
           +G+  S  F P  A+ +   S    V + HS+A W   + + + + +KL+VIDFSATWCG
Sbjct: 1   MGSFFSTMFTPPPAADDGGDSR---VVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCG 60

Query: 68  PCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR +EP+F  MA  + D  F KIDVDELS+VA+ + V+AMPTFVL++ GK +  VVGA+
Sbjct: 61  PCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAK 120

Query: 128 KEELEKKIQKHRSAS 142
           K+ELE+K+    S+S
Sbjct: 121 KDELERKVNMFISSS 132

[Close]

BLAST of Carg22909 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.2e-25
Identity = 54/112 (48.21%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 27  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTY-TDV 86
           ++E   V   H++  W +  D  +ES+KL+VIDF+A+WC PCR++ P FN +A  + +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Carg22909 vs. ExPASy Swiss-Prot
Match: O64394 (Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 8.3e-25
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 19  STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAM 78
           +TA+A AA+     V S HS  +W +  +    + KL+VIDF+A+WCGPCR+M P F  +
Sbjct: 6   ATATATAAAVGAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADL 65

Query: 79  ASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           A  +    F+K+DVDEL  +A+ F V+AMPTF+ ++ G V D VVGA KEEL  K+  H
Sbjct: 66  AKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLH 124

[Close]

BLAST of Carg22909 vs. ExPASy TrEMBL
Match: A0A6J1EL53 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASGGT 145
           TVVGARKEELEKKIQKHRSASGGT
Sbjct: 121 TVVGARKEELEKKIQKHRSASGGT 144

[Close]

BLAST of Carg22909 vs. ExPASy TrEMBL
Match: A0A6J1I8S1 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVLFSTIGTL+SKWFGPS ASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLLSKWFGPSMASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASGGT 145
           TVVGARKEELEKKIQKHRSASGGT
Sbjct: 121 TVVGARKEELEKKIQKHRSASGGT 144

[Close]

BLAST of Carg22909 vs. ExPASy TrEMBL
Match: A0A5D3DQ11 (Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008280 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61
Identity = 122/144 (84.72%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVL S IG L+S WFGP TA+AEAASSEPSSV SFHSSARW+LHF+SVQE+SKLMVIDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEP+FNAMAS YTDVEF KIDVDEL+DVAQ FGVQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASGGT 145
           TVVGARKEELEKKI+KHRS SG T
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

[Close]

BLAST of Carg22909 vs. ExPASy TrEMBL
Match: A0A1S3B804 (thioredoxin H2 OS=Cucumis melo OX=3656 GN=LOC103487024 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61
Identity = 122/144 (84.72%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVL S IG L+S WFGP TA+AEAASSEPSSV SFHSSARW+LHF+SVQE+SKLMVIDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEP+FNAMAS YTDVEF KIDVDEL+DVAQ FGVQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASGGT 145
           TVVGARKEELEKKI+KHRS SG T
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

[Close]

BLAST of Carg22909 vs. ExPASy TrEMBL
Match: A0A6J1F1R9 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60
Identity = 121/138 (87.68%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60
           MGVL S IG L+S WFGPSTA AE ASSEPSSV SFHSSARW+LHF+S +ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Carg22909 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 158.3 bits (399), Expect = 4.6e-39
Identity = 74/133 (55.64%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 8   IGTLVSKWFGP-STASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCG 67
           +G  +S  FG    A+A    SEPS V  F SSARW+LHF+ ++ES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA  + DV+F+K+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

[Close]

BLAST of Carg22909 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 54/112 (48.21%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 27  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTY-TDV 86
           ++E   V   H++  W +  D  +ES+KL+VIDF+A+WC PCR++ P FN +A  + +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Carg22909 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 114.4 bits (285), Expect = 7.7e-26
Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = 0


Query: 27  SSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVE 86
           +SE   V + H+   W        ES  L+V+DF+A+WCGPCR + P F  +A    +V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 87  FIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           F+K+D DEL  VA D+ +QAMPTF+ L+ GK+LD VVGA+K+EL+  I KH
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Carg22909 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 33  VSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDV 92
           V + H+   W        ES KL+VIDF+A+WC PCR + P F  MA  +T+V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 93  DELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           DEL  VAQ+F V+AMPTFV ++ G ++D VVGA K+E+ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Carg22909 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 112.8 bits (281), Expect = 2.2e-25
Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 33  VSSFHSSARWKLHFDSVQESSKLMVIDFSATWCGPCRLMEPSFNAMASTYTDVEFIKIDV 92
           V + H+   W     +  ES KL+VIDF+ATWC PCR + P F  +A  + DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 93  DELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRS 140
           DEL+ VA++F VQAMPTF+ ++ G++ +TVVGA KEE+   ++KH++
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

The following BLAST results are available for this feature:

BLAST of Carg22909 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928736.1	2.3e-72	100.00	thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like iso...	[more]
XP_022971509.1	2.5e-71	98.61	thioredoxin H2-like [Cucurbita maxima]	[more]
XP_038903635.1	9.6e-63	88.73	thioredoxin H2 [Benincasa hispida]	[more]
XP_008443435.2	3.1e-61	84.72	PREDICTED: thioredoxin H2 [Cucumis melo] >TYK25664.1 thioredoxin H2 [Cucumis mel...	[more]
XP_023531185.1	6.9e-61	85.81	thioredoxin H2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22909 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	6.5e-38	55.64	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q6Z4I3	1.6e-28	50.39	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S...	[more]
Q851R5	1.2e-26	47.41	Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 S...	[more]
Q39239	2.2e-25	48.21	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
O64394	8.3e-25	46.22	Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3	[more]

BLAST of Carg22909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL53	1.1e-72	100.00	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1	[more]
A0A6J1I8S1	1.2e-71	98.61	thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1	[more]
A0A5D3DQ11	1.5e-61	84.72	Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00828...	[more]
A0A1S3B804	1.5e-61	84.72	thioredoxin H2 OS=Cucumis melo OX=3656 GN=LOC103487024 PE=4 SV=1	[more]
A0A6J1F1R9	1.7e-60	87.68	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1	[more]

BLAST of Carg22909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	4.6e-39	55.64	thioredoxin 2	[more]
AT1G19730.1	1.5e-26	48.21	Thioredoxin superfamily protein	[more]
AT3G51030.1	7.7e-26	46.85	thioredoxin H-type 1	[more]
AT1G45145.1	1.0e-25	50.48	thioredoxin H-type 5	[more]
AT5G42980.1	2.2e-25	47.66	thioredoxin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 64..73 score: 58.06 coord: 103..114 score: 36.11 coord: 56..64 score: 45.12
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 14..141 e-value: 7.9E-39 score: 134.4
None	No IPR available	PANTHER	PTHR10438:SF413	THIOREDOXIN H2	coord: 9..140
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 9..140
None	No IPR available	CDD	cd02947	TRX_family	coord: 45..135 e-value: 3.95075E-38 score: 123.052
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 47..136 e-value: 4.2E-28 score: 97.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 14..139 score: 14.037317
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 57..75
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 47..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22909-RA	Carg22909-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen