Homology
BLAST of Carg22680 vs. NCBI nr
Match:
XP_022938027.1 (ribosomal RNA processing protein 1 homolog isoform X1 [Cucurbita moschata] >KAG6586118.1 Ribosomal RNA processing protein 1-like B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020939.1 Ribosomal RNA processing protein 1-like B, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1068.9 bits (2763), Expect = 1.4e-308
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 0
Query: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW
Sbjct: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
Query: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF
Sbjct: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
Query: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG
Sbjct: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
Query: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIVVY 240
KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIVVY
Sbjct: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIVVY 240
Query: 241 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 300
GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD
Sbjct: 241 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 300
Query: 301 GDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISD 360
GDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISD
Sbjct: 301 GDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISD 360
Query: 361 LVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDN 420
LVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDN
Sbjct: 361 LVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDN 420
Query: 421 DMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMKNN 480
DMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMKNN
Sbjct: 421 DMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMKNN 480
Query: 481 LVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVR 540
LVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVR
Sbjct: 481 LVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVR 540
Query: 541 SLPVKRLKKPKSKST 556
SLPVKRLKKPKSKST
Sbjct: 541 SLPVKRLKKPKSKST 555
BLAST of Carg22680 vs. NCBI nr
Match:
XP_023538012.1 (ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1033.9 bits (2672), Expect = 5.2e-298
Identity = 541/557 (97.13%), Postives = 548/557 (98.38%), Query Frame = 0
Query: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVW
Sbjct: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 60
Query: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
HADKLPVQTELINRLASLLL+LELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF
Sbjct: 61 HADKLPVQTELINRLASLLLHLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
Query: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
MHQFFALLKKNSWDLELCRR VQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG
Sbjct: 121 MHQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
Query: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGE-INSDDDIVV 240
K+VIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQL+ERRKCGE INSDDDIVV
Sbjct: 181 KEVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVV 240
Query: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ
Sbjct: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
Query: 301 DGDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA-KNTNGI 360
DGDEVPTLVPIS EEISMADVDV++EITDKALKKKKKTKK SDGSGKKKAKKA KNTNGI
Sbjct: 301 DGDEVPTLVPISSEEISMADVDVSDEITDKALKKKKKTKKVSDGSGKKKAKKAKKNTNGI 360
Query: 361 SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG 420
SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG
Sbjct: 361 SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG 420
Query: 421 DNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMK 480
DN M+PVISANGSVKKRKRAKKVDVQ THDVVLPNQVDTEGNT AKSGENSVKKVRFSMK
Sbjct: 421 DNVMTPVISANGSVKKRKRAKKVDVQQTHDVVLPNQVDTEGNTAAKSGENSVKKVRFSMK 480
Query: 481 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 540
NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV MRAKKG
Sbjct: 481 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVTMRAKKG 540
Query: 541 VRSLPVKRLKKPKSKST 556
VRSLPVKRLKKPKSKST
Sbjct: 541 VRSLPVKRLKKPKSKST 557
BLAST of Carg22680 vs. NCBI nr
Match:
XP_022965500.1 (ribosomal RNA processing protein 1 homolog isoform X1 [Cucurbita maxima])
HSP 1 Score: 1025.8 bits (2651), Expect = 1.4e-295
Identity = 537/557 (96.41%), Postives = 546/557 (98.03%), Query Frame = 0
Query: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVW
Sbjct: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 60
Query: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
HADKL VQTELINRLASLLL+LELPLAFQYFSIFL+TMRREWAGIDALRLDKFYLLIRRF
Sbjct: 61 HADKLHVQTELINRLASLLLHLELPLAFQYFSIFLVTMRREWAGIDALRLDKFYLLIRRF 120
Query: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
MHQFFALLKKNSWDLELCRR VQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG
Sbjct: 121 MHQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
Query: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGE-INSDDDIVV 240
K+VIDI+FKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQL+ERRKCGE INSDDDIVV
Sbjct: 181 KEVIDIVFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVV 240
Query: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ
Sbjct: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
Query: 301 DGDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA-KNTNGI 360
DGDEVPTLVPIS EEISMADVDV++EITDKALKKKKKTKKA+DGSGKKK KKA KNTNGI
Sbjct: 301 DGDEVPTLVPISSEEISMADVDVSDEITDKALKKKKKTKKATDGSGKKKTKKAKKNTNGI 360
Query: 361 SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG 420
SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG
Sbjct: 361 SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG 420
Query: 421 DNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMK 480
DN MSPVISANGSVKKRKRAKK DVQ THDVVLPNQVDTEGNT AKSGENSVKKVRFSMK
Sbjct: 421 DNVMSPVISANGSVKKRKRAKKADVQQTHDVVLPNQVDTEGNTAAKSGENSVKKVRFSMK 480
Query: 481 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 540
NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG
Sbjct: 481 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 540
Query: 541 VRSLPVKRLKKPKSKST 556
VRSLPVKR KKPKSKST
Sbjct: 541 VRSLPVKRSKKPKSKST 557
BLAST of Carg22680 vs. NCBI nr
Match:
XP_038875379.1 (ribosomal RNA processing protein 1 homolog [Benincasa hispida])
HSP 1 Score: 908.7 bits (2347), Expect = 2.5e-260
Identity = 475/564 (84.22%), Postives = 516/564 (91.49%), Query Frame = 0
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQ S+SDGDMKKLWKGLFYC+WH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQKSLSDGDMKKLWKGLFYCIWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+LPLA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCR VQVLEERVFF DDKFHGNGVNYQIASVFLEEL+PFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCSVQVLEERVFFADDKFHGNGVNYQIASVFLEELKPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+VID+LFKPF+ SM KL DKV+LGKIKSNLFDV+LKMGKQL++RRKCG +++S DDIVV+
Sbjct: 183 EVIDVLFKPFLCSMVKLPDKVLLGKIKSNLFDVILKMGKQLLDRRKCGDDVDSGDDIVVF 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GTI TNLFS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK FISSG+EIS+P LQEQD
Sbjct: 243 GTISFTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFISSGVEISLPGLQEQD 302
Query: 302 GDEVPTLVPISGE-----EISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAK-- 361
GDEVPTLVP+S E EISM DVDVN + TDKALKK+KK+KKA+D SGKKKAKKAK
Sbjct: 303 GDEVPTLVPVSSEEEAPSEISMVDVDVNADSTDKALKKQKKSKKATDDSGKKKAKKAKKA 362
Query: 362 --NTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
TNGISDLVS NT +NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFER
Sbjct: 363 KETTNGISDLVSENTPVNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERA 422
Query: 422 AAEAEFGDNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVK 481
AAEA+F D+ SPV+SANGSVKKRKRAK VD H+VVL +QVD EGNT AKS E SVK
Sbjct: 423 AAEADFEDSFASPVMSANGSVKKRKRAKNVDGSQKHEVVLSSQVDAEGNTAAKSEEKSVK 482
Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542
Query: 542 AMRAKKGVRSLPVKRLKKPKSKST 556
AMRAKKGVRSLPVKRLKK KSKST
Sbjct: 543 AMRAKKGVRSLPVKRLKKLKSKST 566
BLAST of Carg22680 vs. NCBI nr
Match:
XP_008450828.1 (PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa] >TYK14953.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 903.3 bits (2333), Expect = 1.1e-258
Identity = 475/564 (84.22%), Postives = 512/564 (90.78%), Query Frame = 0
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCR LVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSMAKL DKV+ GKIKSNLFDV+LKMGKQL+E RK G +I+S DD VY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GTI LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISGE-----EISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPI E EISM DVDV+ E TDKALKK+K++KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
K TNGISDLVS N+ NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFE+V
Sbjct: 363 KKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKV 422
Query: 422 AAEAEFGDNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVK 481
AAEA+FGD+ +SPVIS NGSVKKRKRAK VD HDV LP++ EGNT AKS E SVK
Sbjct: 423 AAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVK 482
Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542
Query: 542 AMRAKKGVRSLPVKRLKKPKSKST 556
+MR KKGVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKKGVRSLPVKRLKKLKSKST 566
BLAST of Carg22680 vs. ExPASy Swiss-Prot
Match:
Q91YK2 (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)
HSP 1 Score: 113.6 bits (283), Expect = 7.1e-24
Identity = 79/230 (34.35%), Postives = 121/230 (52.61%), Query Frame = 0
Query: 17 LASSNKATRDKTLRVIIKTWLPTQT-----SISDGDMKKLWKGLFYCVWHADKLPVQTEL 76
LASS K RD+ +R ++ +L +T S S ++ K+WKGLFYC+W D+ +Q EL
Sbjct: 16 LASSEKGVRDRAVRK-LRQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75
Query: 77 INRLASLLLNLELPLAFQYFSI--FLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLK 136
N + S L+++ L QY I F TM REW GID L+LDK+Y+LIR + Q F +LK
Sbjct: 76 AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135
Query: 137 KNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLGKDVIDIL 196
+N+W+ + +L + + + + NGV + V+LEEL L D L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195
Query: 197 FKPFILSMAKLSDKVMLGKIKSNLFDVLLKMG----KQLIERRKCGEINS 234
PF AK D ++ + +F+V++ ++ +E RK E S
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKEDGS 242
BLAST of Carg22680 vs. ExPASy Swiss-Prot
Match:
Q14684 (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)
HSP 1 Score: 107.8 bits (268), Expect = 3.9e-22
Identity = 72/210 (34.29%), Postives = 112/210 (53.33%), Query Frame = 0
Query: 17 LASSNKATRDKTLR-----VIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLPVQTEL 76
LASS K RD+ ++ + +KT T S ++ K+WKGLFYC+W D+ +Q EL
Sbjct: 16 LASSEKGIRDRAVKKLRQYISVKTQRET-GGFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75
Query: 77 INRLASLLLNLELPLAFQYF-SIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKK 136
N +A L+ + A F F TM REW GID LRLDK+Y+LIR + Q F +LK+
Sbjct: 76 ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135
Query: 137 NSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVI---DIL 196
N W+ + + VL + V + + NGV + ++L+EL GK+++ ++
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSKV--GGKELLADQNLK 195
Query: 197 F-KPFILSMAKLSDKVMLGKIKSNLFDVLL 217
F PF AK D ++ I +F+ ++
Sbjct: 196 FIDPFCKIAAKTKDHTLVQTIARGVFEAIV 221
BLAST of Carg22680 vs. ExPASy Swiss-Prot
Match:
P56182 (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 1.3e-20
Identity = 72/234 (30.77%), Postives = 116/234 (49.57%), Query Frame = 0
Query: 13 LIKLLASSNKATRDKTLRVIIKTWLPTQTSISDG-----DMKKLWKGLFYCVWHADKLPV 72
L + LA + + TRD+ +R + K ++ +T + G ++ K+WKGLFYC+W DK +
Sbjct: 13 LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKPLL 72
Query: 73 QTELINRLASLLLNLELPLAFQYF-SIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFA 132
Q EL ++ L+ + A F F TM REW GID LRLDKFY+L+R +++
Sbjct: 73 QEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESLK 132
Query: 133 LLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLGKDVI 192
+LK W+ L+++L + + NGV +FLEEL L D
Sbjct: 133 VLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTKVGAEELTADQN 192
Query: 193 DILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIV 239
PF A+ D ++L I +F+ +++ IE E+++ D+ V
Sbjct: 193 LKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE-DLLNELDTQDEEV 243
BLAST of Carg22680 vs. ExPASy Swiss-Prot
Match:
P56183 (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)
HSP 1 Score: 101.7 bits (252), Expect = 2.8e-20
Identity = 70/221 (31.67%), Postives = 110/221 (49.77%), Query Frame = 0
Query: 13 LIKLLASSNKATRDKTLRVIIKTWLPTQTSISDG-----DMKKLWKGLFYCVWHADKLPV 72
L + LA + + TRD+ LR + K ++ ++ + G ++ K+WKGLFYC+W DK P+
Sbjct: 13 LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72
Query: 73 QTELINRLASLLLNL--ELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFF 132
Q E + R + L++ Q+ F TM REW GID LRLDKFY+L+R + +
Sbjct: 73 QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132
Query: 133 ALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPF--LPLGKDV 192
+K WD +L+++L + D + +GV +FLEEL L D
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTADQ 192
Query: 193 IDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIE 225
PF A+ D +L KI ++F +++ IE
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIE 230
BLAST of Carg22680 vs. ExPASy Swiss-Prot
Match:
Q9Y7M6 (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 6.2e-20
Identity = 73/196 (37.24%), Postives = 105/196 (53.57%), Query Frame = 0
Query: 14 IKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLPVQTELIN 73
IK LA++++ TRDK L ++ +L + D KLWKGLFYC+W ADK Q +L +
Sbjct: 8 IKKLAANDRKTRDKALE-SLQRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67
Query: 74 RLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFALLKKNSW 133
LA+L+ + + + S F TM REW GID LR DKFYLL+RRF F ++ S
Sbjct: 68 NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127
Query: 134 DLELCRRLV---QVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVIDILFKP 193
L + + Q+ + F T++ NG+ + +A ++ EELR P D + P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYPEDVPKAD-WYLP 187
Query: 194 FILSMAKLSDKVMLGK 207
F S K S V+L K
Sbjct: 188 FD-STIKSSHNVVLRK 200
BLAST of Carg22680 vs. ExPASy TrEMBL
Match:
A0A6J1FCV3 (ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444239 PE=4 SV=1)
HSP 1 Score: 1068.9 bits (2763), Expect = 7.0e-309
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 0
Query: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW
Sbjct: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
Query: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF
Sbjct: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
Query: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG
Sbjct: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
Query: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIVVY 240
KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIVVY
Sbjct: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGEINSDDDIVVY 240
Query: 241 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 300
GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD
Sbjct: 241 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 300
Query: 301 GDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISD 360
GDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISD
Sbjct: 301 GDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISD 360
Query: 361 LVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDN 420
LVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDN
Sbjct: 361 LVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDN 420
Query: 421 DMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMKNN 480
DMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMKNN
Sbjct: 421 DMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMKNN 480
Query: 481 LVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVR 540
LVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVR
Sbjct: 481 LVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKGVR 540
Query: 541 SLPVKRLKKPKSKST 556
SLPVKRLKKPKSKST
Sbjct: 541 SLPVKRLKKPKSKST 555
BLAST of Carg22680 vs. ExPASy TrEMBL
Match:
A0A6J1HNW4 (ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465388 PE=4 SV=1)
HSP 1 Score: 1025.8 bits (2651), Expect = 6.8e-296
Identity = 537/557 (96.41%), Postives = 546/557 (98.03%), Query Frame = 0
Query: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVW 60
MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVW
Sbjct: 1 MEVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 60
Query: 61 HADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRF 120
HADKL VQTELINRLASLLL+LELPLAFQYFSIFL+TMRREWAGIDALRLDKFYLLIRRF
Sbjct: 61 HADKLHVQTELINRLASLLLHLELPLAFQYFSIFLVTMRREWAGIDALRLDKFYLLIRRF 120
Query: 121 MHQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
MHQFFALLKKNSWDLELCRR VQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG
Sbjct: 121 MHQFFALLKKNSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLG 180
Query: 181 KDVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGE-INSDDDIVV 240
K+VIDI+FKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQL+ERRKCGE INSDDDIVV
Sbjct: 181 KEVIDIVFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLLERRKCGEDINSDDDIVV 240
Query: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ
Sbjct: 241 YGTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQ 300
Query: 301 DGDEVPTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA-KNTNGI 360
DGDEVPTLVPIS EEISMADVDV++EITDKALKKKKKTKKA+DGSGKKK KKA KNTNGI
Sbjct: 301 DGDEVPTLVPISSEEISMADVDVSDEITDKALKKKKKTKKATDGSGKKKTKKAKKNTNGI 360
Query: 361 SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG 420
SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG
Sbjct: 361 SDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFG 420
Query: 421 DNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMK 480
DN MSPVISANGSVKKRKRAKK DVQ THDVVLPNQVDTEGNT AKSGENSVKKVRFSMK
Sbjct: 421 DNVMSPVISANGSVKKRKRAKKADVQQTHDVVLPNQVDTEGNTAAKSGENSVKKVRFSMK 480
Query: 481 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 540
NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG
Sbjct: 481 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 540
Query: 541 VRSLPVKRLKKPKSKST 556
VRSLPVKR KKPKSKST
Sbjct: 541 VRSLPVKRSKKPKSKST 557
BLAST of Carg22680 vs. ExPASy TrEMBL
Match:
A0A5A7U008 (Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00010 PE=4 SV=1)
HSP 1 Score: 903.3 bits (2333), Expect = 5.1e-259
Identity = 475/564 (84.22%), Postives = 512/564 (90.78%), Query Frame = 0
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCR LVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSMAKL DKV+ GKIKSNLFDV+LKMGKQL+E RK G +I+S DD VY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GTI LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISGE-----EISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPI E EISM DVDV+ E TDKALKK+K++KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
K TNGISDLVS N+ NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFE+V
Sbjct: 363 KKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKV 422
Query: 422 AAEAEFGDNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVK 481
AAEA+FGD+ +SPVIS NGSVKKRKRAK VD HDV LP++ EGNT AKS E SVK
Sbjct: 423 AAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVK 482
Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542
Query: 542 AMRAKKGVRSLPVKRLKKPKSKST 556
+MR KKGVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKKGVRSLPVKRLKKLKSKST 566
BLAST of Carg22680 vs. ExPASy TrEMBL
Match:
A0A1S3BR64 (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)
HSP 1 Score: 903.3 bits (2333), Expect = 5.1e-259
Identity = 475/564 (84.22%), Postives = 512/564 (90.78%), Query Frame = 0
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
EVVEGDQ+FTSL+KLLASSNKATRDKTLRVIIKTWLPTQTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 EVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK+PVQ+ELINRLASLLL+L+L LA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFALLKK+SWDLELCR LVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL K
Sbjct: 123 HQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLQK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSMAKL DKV+ GKIKSNLFDV+LKMGKQL+E RK G +I+S DD VY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTAVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GTI LTN FS+TFYELGSSPDCCQ NRKVLFAMHEE+QKLEK F SSGIEIS PDLQEQD
Sbjct: 243 GTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQEQD 302
Query: 302 GDEVPTLVPISGE-----EISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKA--- 361
GDEVPTLVPI E EISM DVDV+ E TDKALKK+K++KKA+DGSGKKKAKKA
Sbjct: 303 GDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAKKA 362
Query: 362 -KNTNGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERV 421
K TNGISDLVS N+ NKD+ENIVVANGENSNNEQISDGNMITFDE+VISNLQMQFE+V
Sbjct: 363 KKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFEKV 422
Query: 422 AAEAEFGDNDMSPVISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVK 481
AAEA+FGD+ +SPVIS NGSVKKRKRAK VD HDV LP++ EGNT AKS E SVK
Sbjct: 423 AAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKSVK 482
Query: 482 KVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 541
KVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEFPATTKRTKRRAV
Sbjct: 483 KVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRRAV 542
Query: 542 AMRAKKGVRSLPVKRLKKPKSKST 556
+MR KKGVRSLPVKRLKK KSKST
Sbjct: 543 SMRTKKGVRSLPVKRLKKLKSKST 566
BLAST of Carg22680 vs. ExPASy TrEMBL
Match:
A0A6J1D805 (ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111018204 PE=4 SV=1)
HSP 1 Score: 897.1 bits (2317), Expect = 3.6e-257
Identity = 473/566 (83.57%), Postives = 513/566 (90.64%), Query Frame = 0
Query: 2 EVVEGDQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWH 61
E+VEGDQDFTSLIK LASSNKATRDKTLR+I+KTWLP QTS+SDGDMKKLWKGLFYCVWH
Sbjct: 3 ELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCVWH 62
Query: 62 ADKLPVQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFM 121
ADK PVQ+ELINRL++LLL+L+LPLA QYFS+FLLTMRREWAGIDALRLDKFYLLIRRF+
Sbjct: 63 ADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFL 122
Query: 122 HQFFALLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGK 181
HQFFAL+KK+SWDLELCRRL+QVLEERVFFTDDKFHGNGVNY IASVFLEELRPFLPL K
Sbjct: 123 HQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPLRK 182
Query: 182 DVIDILFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCG-EINSDDDIVVY 241
+V+D+LFKPF+LSMAKL DKV++GKIKSNLFDVLLKMGKQL+E RKCG +++S DDIVVY
Sbjct: 183 EVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIVVY 242
Query: 242 GTIPLTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQD 301
GT+ LTNLFSSTFYELGSSP+CCQ NRKVLFA+HEEYQKLEK FISSGIEIS+PDL EQD
Sbjct: 243 GTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHEQD 302
Query: 302 GDEVPTLVPISGEE-----ISMADVDVNNEITDKALKKKKKTKKASDGSGK----KKAKK 361
GDEVPTLVP+S EE ISM DVDV E TDKALKK+KK KKA+D SGK KKAKK
Sbjct: 303 GDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKAKK 362
Query: 362 AKNT-NGISDLVSNNTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFER 421
AK T NGISDLVS NT MNKD+ENI VANGENSNNEQISDGNMI FDESVISNLQMQFER
Sbjct: 363 AKKTMNGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQFER 422
Query: 422 VAAEAEFGDNDMSPVISANGSVKKRKRAKKVD-VQHTHDVVLPNQVDTEGNTVAKSGENS 481
VAAEA+F D+ + PV+SANGSVKKRKRAK D Q TH +VLP+QVD E N AKSGE S
Sbjct: 423 VAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGEKS 482
Query: 482 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRR 541
VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFP TKRTKRR
Sbjct: 483 VKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTKRR 542
Query: 542 AVAMRAKKGVRSLPVKRLKKPKSKST 556
AVAMR+KKGVRSLPVKRLKK KSK+T
Sbjct: 543 AVAMRSKKGVRSLPVKRLKKLKSKTT 567
BLAST of Carg22680 vs. TAIR 10
Match:
AT5G20600.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )
HSP 1 Score: 464.2 bits (1193), Expect = 1.5e-130
Identity = 264/554 (47.65%), Postives = 362/554 (65.34%), Query Frame = 0
Query: 7 DQDFTSLIKLLASSNKATRDKTLRVIIKTWLPTQTSISDGDMKKLWKGLFYCVWHADKLP 66
++D SLIK LAS ++ RD++LR +++TWLP QT ISD DMKKLW+G+FYCVWHADK
Sbjct: 17 EEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVWHADKSL 76
Query: 67 VQTELINRLASLLLNLELPLAFQYFSIFLLTMRREWAGIDALRLDKFYLLIRRFMHQFFA 126
Q+ELI+RL+S L +L LPL+ YF++FL TMRREW+ ID LRLDKFYLLIRRF+H FF+
Sbjct: 77 YQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLHGFFS 136
Query: 127 LLKKNSWDLELCRRLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPLGKDVIDI 186
L+ NSWDLE RRL+ +L + DDKF GNGVNY I S F+EELRPFLPL K+V+++
Sbjct: 137 LIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLRKEVLEL 196
Query: 187 LFKPFILSMAKLSDKVMLGKIKSNLFDVLLKMGKQLIERRKCGE--INSDDDIVVYGTIP 246
LF PF+ M ++DK+++GKIKSNLFD LLKMGK+L+ ++ G+ + DDD+VV G+I
Sbjct: 197 LFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVVVLGSIA 256
Query: 247 LTNLFSSTFYELGSSPDCCQSNRKVLFAMHEEYQKLEKSFISSGIEISMPDLQEQDGDEV 306
L+ F+ FYELGSSP+C Q NRK++FA+H+E+ +LEK SS IE+S+ + DEV
Sbjct: 257 LSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASRPGNDEV 316
Query: 307 PTLVPISGEEISMADVDVNNEITDKALKKKKKTKKASDGSGKKKAKKAKNTNGISDLVSN 366
P VP+S ++ V + +I KKK K + K KK + + DL
Sbjct: 317 PESVPVSESNTNV--VSKSKKIVANGSSSKKKGLKKCSKTKKDSVKKGAVMDSVVDL--- 376
Query: 367 NTHMNKDDENIVVANGENSNNEQISDGNMITFDESVISNLQMQFERVAAEAEFGDNDMSP 426
NKD+ +FDE++IS+L+ +FE++A+E ++++
Sbjct: 377 ---GNKDE----------------------SFDETMISDLRQEFEKIASEMSPSKSEVAS 436
Query: 427 V------ISANGSVKKRKRAKKVDVQHTHDVVLPNQVDTEGNTVAKSGENSVKKVRFSMK 486
V +S + KKRKR K + Q V N+ E + S E S K+VRF+MK
Sbjct: 437 VCDVAEPVSVSKKTKKRKRENKGEEQ----VSTVNRDAAETSLAGPSSEKSSKRVRFAMK 496
Query: 487 NNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPATTKRTKRRAVAMRAKKG 546
NNLVWKPH PLPP+ LR PP+ TPRGSALK+GIP GP+ E +++TK++ V A++G
Sbjct: 497 NNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVREL--ASRKTKKK-VKPAARRG 531
Query: 547 VRSLPVKRLKKPKS 553
V+S +K LKK S
Sbjct: 557 VKS--IKNLKKKLS 531
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022938027.1 | 1.4e-308 | 100.00 | ribosomal RNA processing protein 1 homolog isoform X1 [Cucurbita moschata] >KAG6... | [more] |
XP_023538012.1 | 5.2e-298 | 97.13 | ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] | [more] |
XP_022965500.1 | 1.4e-295 | 96.41 | ribosomal RNA processing protein 1 homolog isoform X1 [Cucurbita maxima] | [more] |
XP_038875379.1 | 2.5e-260 | 84.22 | ribosomal RNA processing protein 1 homolog [Benincasa hispida] | [more] |
XP_008450828.1 | 1.1e-258 | 84.22 | PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556... | [more] |
Match Name | E-value | Identity | Description | |
Q91YK2 | 7.1e-24 | 34.35 | Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P... | [more] |
Q14684 | 3.9e-22 | 34.29 | Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE... | [more] |
P56182 | 1.3e-20 | 30.77 | Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=... | [more] |
P56183 | 2.8e-20 | 31.67 | Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE... | [more] |
Q9Y7M6 | 6.2e-20 | 37.24 | Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FCV3 | 7.0e-309 | 100.00 | ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HNW4 | 6.8e-296 | 96.41 | ribosomal RNA processing protein 1 homolog isoform X1 OS=Cucurbita maxima OX=366... | [more] |
A0A5A7U008 | 5.1e-259 | 84.22 | Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A1S3BR64 | 5.1e-259 | 84.22 | ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922... | [more] |
A0A6J1D805 | 3.6e-257 | 83.57 | ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC... | [more] |
Match Name | E-value | Identity | Description | |
AT5G20600.1 | 1.5e-130 | 47.65 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ... | [more] |