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Carg22670 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGACGAGGCGAACAGAGCTGTGAGTATTTCTACTCTTCTCATCTTGTTTTTCCACTCGCCACTGCCATTTTCCGATGCATGAACTCTTGATTTTGTTTCTGGAATCAGACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTAATCTCCTTTCATTTTTCACATAAATCTTTTGTAATTACTGTCTAGATTGTTCTTATTCATATTCGTGTTTAATTTCTAAAGTAAACGAATGTTTCCTAGGTTAACTGATGAATCCAATCAATGTTCGTATTTCCAGTTTTGTCATTCTTCGATGTTTCGCTTTATTTGAATGGAGAGTTCTTGATTTATGAGTTCAAGCTGGTGTTCTTTCTCCTTGCTTTGCAGGTGCAAAGCCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACTTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGGTACTCGACAAATCTGTATTTTGTAACTGGAAATTTGTTCATTCTTTGCCTCAATCGTGATTGCTTATCATTGATTTCTTTCCATCATTCTTTGTGGTGCAGGGAGAGCGTGAGTTATGCTACAATTGATCGATCCAGTTGAAGTTAGATTTTCTTTTATCTCATAGTATATATATGAAATTCTCTTACTTTGTGTTGTCTCATCCTGACCAGGTTTGTTTTAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGTTCAAGGATAGTGAAGCTGCAATTGTCTCACTGCAGGTTCATATTAGTATTACTTTCATCTGTAGAGACAAGAGATCTTCCTTTGAGTTCCCAATTTTGTATGCCTATCATTCACGTTGTCTTTTCTTGAAGATTTTGTTAGAGCATTTTTCATTCACTAACTAACATTTTCTTGCCCTTCTATGTTCGATGTGTAACGACCCTAGATTTTTACTAACCTAAAGTCTCTACCGTCATTATACTATACTCTCTTATACTGAAAATAAACCTTGAAAATATTGTCGTAAAACATTGCCATGGACTTGTATGTTTGAAATCATCTTTAAAAGAACCCAAGGAAATACTAAATAAATCAAGTAAAACATTAAAAGTAAAAACACCCTATACTAACCTAAAGTCTAAGAGATGAAATACCACTATCCTATGCACGTGTCATGATCTCTACTTGCAATGTCCTCGTCAACTGCACAGGGGTACTTTGTCTTTACCTGAAATAGAAATAGCACACGGCTTGAGTATTTTAAGAAATACTCCGTAAGTGGGGGTCAGGGAATGCAAACACATACAATTCATGATTAGAGGCCTATCGTTAAAATCATCATAGGGGTCGTTACACTATGTTTTCTTGAAATTTTAATTCTTGCATTAACACAGAATCCGCACACACACAAAAGGGTATTTCTTATGAGGATCTGGGCATATCCAAACACTTCTTTGAACGAATTACGTTCAGTGAAGAGTTCGATGCCATCAATGCTACCTTCTTTCTTGCCAACTAGAACTTAGCTCAAGCATACACACAATATTCTTGGCTTTCAATTTTTTCTTGTCAATTTGAACATAGCTCAATCTGTGAAGGCATATAGATACAATATCCTCGACATCTAATTGAAAGCGAACTTGCTTTTCTGTTTTGGCATCTAATTGAAAGCGAACTAATCACGTTATTTGACTGGTAGAGGTGTCGTTACCAAGAGATTTGGAGAGTAGGCTGAACTTTTGTGATTGACACTATTTGGCAATGTTCTTATTTAATCTTTGATAATTGGCATTTGGGTATTTTTTTTTATTATGAACCCTTCATTGAAGATGGCTTTCTTGCACGTTTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGTCTGTAGCATAA ATGGCGGACGAGGCGAACAGAGCTACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTGCAAAGCCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACTTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGTTCAAGGATAGTGAAGCTGCAATTGTCTCACTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGTCTGTAGCATAA ATGGCGGACGAGGCGAACAGAGCTACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTGCAAAGCCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACTTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGTTCAAGGATAGTGAAGCTGCAATTGTCTCACTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGTCTGTAGCATAA MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLRELLQQDPGIARQIMSMSVA Homology
BLAST of Carg22670 vs. NCBI nr
Match: KAG7020949.1 (Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 224.9 bits (572), Expect = 3.7e-55 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Carg22670 vs. NCBI nr
Match: KAG6586128.1 (Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 218.4 bits (555), Expect = 3.5e-53 Identity = 123/129 (95.35%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of Carg22670 vs. NCBI nr
Match: XP_023536940.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52 Identity = 122/129 (94.57%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of Carg22670 vs. NCBI nr
Match: XP_022937756.1 (prefoldin subunit 1-like [Cucurbita moschata]) HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52 Identity = 121/129 (93.80%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of Carg22670 vs. NCBI nr
Match: XP_022966081.1 (prefoldin subunit 1 [Cucurbita maxima]) HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52 Identity = 120/129 (93.02%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy Swiss-Prot
Match: O60925 (Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 3.3e-06 Identity = 34/107 (31.78%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy Swiss-Prot
Match: Q3SZE2 (Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.3e-06 Identity = 34/107 (31.78%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy Swiss-Prot
Match: Q5RAM7 (Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.3e-06 Identity = 34/107 (31.78%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy Swiss-Prot
Match: Q9CWM4 (Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.3e-06 Identity = 34/107 (31.78%), Postives = 56/107 (52.34%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy Swiss-Prot
Match: Q54JS0 (Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.3e-04 Identity = 26/110 (23.64%), Postives = 60/110 (54.55%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy TrEMBL
Match: A0A6J1FB94 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 8.3e-53 Identity = 121/129 (93.80%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy TrEMBL
Match: A0A6J1HND5 (prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52 Identity = 120/129 (93.02%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy TrEMBL
Match: A0A6J1ENI7 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 9.5e-49 Identity = 114/129 (88.37%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy TrEMBL
Match: A0A6J1D9I1 (prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.7e-48 Identity = 111/129 (86.05%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of Carg22670 vs. ExPASy TrEMBL
Match: A0A0A0LJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47 Identity = 111/129 (86.05%), Postives = 116/129 (89.92%), Query Frame = 0
BLAST of Carg22670 vs. TAIR 10
Match: AT2G07340.2 (PREFOLDIN 1 ) HSP 1 Score: 174.5 bits (441), Expect = 5.3e-44 Identity = 95/127 (74.80%), Postives = 110/127 (86.61%), Query Frame = 0
BLAST of Carg22670 vs. TAIR 10
Match: AT2G07340.1 (PREFOLDIN 1 ) HSP 1 Score: 174.1 bits (440), Expect = 7.0e-44 Identity = 95/128 (74.22%), Postives = 110/128 (85.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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