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Carg22312 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATATATGCATTTTTGCATGGGTCACTTATTTTGGGCATCTCCCAAATAAATATGCAACTCCCTTCTAATGCTTTAATCACCTTTCTTTCTACTTTCGGCTGCTTTACCAACCTCCAATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGATGGAGAAATGCTGCGTAGGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACTCATCTCAACTGTTTGAAGGTGAGTTTACTTATTTGTATGCACAATCAAATTAGTAGTAATTTGTTGTATGTTGTGTGTTCAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAACGAGATCAGATGCTTGAATACGCTTAACCAATCGGAGCTCGATCGCTTCATGGTATGGTATTAACTCCGTATCATTCGGAATTCGAACTTTATAATAAACATCATCACGTTTGAATCATTGGATGTCGAAAGATTAATAAACCGTTAAAAATAATTACATGTCATAATATAAGTGCATTGTTGACACATGACTTAATCTTTGCACGATTTATTAGTCGTGAAACATTTTTAGGGAAAGTTACCAATCGTAGAGCATTTCTAAGAGAAGAATTGTTAAGTCGTCTGTCCTAAGTTTTATTTCAAGAGTCGAAAAGAATTGTGATTAAAGTATTTTTAGTACAAAGTGTCGAGGATCGTTGAAGAGGAGTCCGCTTATTTAGGGAATAATCATGGGTTTGTAAGTAAGAAATACATTTTTATTGGTACGGAACTTTTTGGAGAAGCCCATAACGAAGCTATGAGAGCCTGTGCTCAAAGTGAACAAAAATAATATGTTGCGTTGAAACCGAAGGAGTTATGTGTGCAGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGAAGGCAATTAGGAAGTGTAGAGTACATAACGGACATGAGTTGTTCTCTAACCCACCCTACCTACTTGTGGAGTACGGACCCAGGTCTCTAACAGGGATATGTAAGAACGGCTGTAATATGATCAGTAGCTTCTGTTTTTCACATTTAAGTAGGCTAATTTGGCTGCGTATCTAGACCATATTAA AATATATGCATTTTTGCATGGGTCACTTATTTTGGGCATCTCCCAAATAAATATGCAACTCCCTTCTAATGCTTTAATCACCTTTCTTTCTACTTTCGGCTGCTTTACCAACCTCCAATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGATGGAGAAATGCTGCGTAGGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACTCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAACGAGATCAGATGCTTGAATACGCTTAACCAATCGGAGCTCGATCGCTTCATGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGAAGGCAATTAGGAAGTGTAGAGTACATAACGGACATGAGTTGTTCTCTAACCCACCCTACCTACTTGTGGAGTACGGACCCAGGTCTCTAACAGGGATATGTAAGAACGGCTGTAATATGATCAGTAGCTTCTGTTTTTCACATTTAAGTAGGCTAATTTGGCTGCGTATCTAGACCATATTAA ATGGACTCTGGGAACCATTCTACAGACCAACCACTTCGTGTCCAACTCCAACTAAAACACGAGGAAGAAGACGATGGCGTGGATGGAGAAATGCTGCGTAGGAGAATTTCTAGCCACCCCTTATATGGCCTCTTACTTGAGACTCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAACGAGATCAGATGCTTGAATACGCTTAACCAATCGGAGCTCGATCGCTTCATGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAATCGATGGCATTCATAAACAGCATGAACTCGCAACTAAGGGAGCTGACGGCGACGGGTGCGGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACACAAAGTGA MDSGNHSTDQPLRVQLQLKHEEEDDGVDGEMLRRRISSHPLYGLLLETHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK Homology
BLAST of Carg22312 vs. NCBI nr
Match: KAG7028461.1 (Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 290.8 bits (743), Expect = 6.7e-75 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Carg22312 vs. NCBI nr
Match: KAG6596993.1 (Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 287.3 bits (734), Expect = 7.4e-74 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of Carg22312 vs. NCBI nr
Match: XP_023539616.1 (homeobox protein KNOX3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.3 bits (734), Expect = 7.4e-74 Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of Carg22312 vs. NCBI nr
Match: XP_022945492.1 (homeobox protein KNOX3 [Cucurbita moschata]) HSP 1 Score: 285.4 bits (729), Expect = 2.8e-73 Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0
BLAST of Carg22312 vs. NCBI nr
Match: XP_022974318.1 (homeobox protein KNOX3-like [Cucurbita maxima] >XP_022975290.1 homeobox protein KNOX3-like [Cucurbita maxima]) HSP 1 Score: 268.9 bits (686), Expect = 2.7e-68 Identity = 145/152 (95.39%), Postives = 146/152 (96.05%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.0e-06 Identity = 34/109 (31.19%), Postives = 52/109 (47.71%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3) HSP 1 Score: 51.6 bits (122), Expect = 9.0e-06 Identity = 50/152 (32.89%), Postives = 75/152 (49.34%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy Swiss-Prot
Match: O65034 (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica OX=39946 GN=OSH15 PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05 Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy Swiss-Prot
Match: O80416 (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH15 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05 Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy Swiss-Prot
Match: F4HXU3 (Protein KNATM OS=Arabidopsis thaliana OX=3702 GN=KNATM PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.0e-05 Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy TrEMBL
Match: A0A6J1G133 (homeobox protein KNOX3 OS=Cucurbita moschata OX=3662 GN=LOC111449708 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.4e-73 Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy TrEMBL
Match: A0A6J1IFV6 (homeobox protein KNOX3-like OS=Cucurbita maxima OX=3661 GN=LOC111472956 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68 Identity = 145/152 (95.39%), Postives = 146/152 (96.05%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy TrEMBL
Match: A0A6J1C8K6 (protein KNATM OS=Momordica charantia OX=3673 GN=LOC111008979 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47 Identity = 100/130 (76.92%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy TrEMBL
Match: A0A444Z1E2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g075536 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.9e-27 Identity = 76/133 (57.14%), Postives = 97/133 (72.93%), Query Frame = 0
BLAST of Carg22312 vs. ExPASy TrEMBL
Match: A0A151REB8 (Homeobox protein knotted-1-like 1 OS=Cajanus cajan OX=3821 GN=KK1_037823 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.6e-26 Identity = 79/148 (53.38%), Postives = 105/148 (70.95%), Query Frame = 0
BLAST of Carg22312 vs. TAIR 10
Match: AT1G14760.2 (KNOX Arabidopsis thaliana meinox ) HSP 1 Score: 75.5 bits (184), Expect = 4.1e-14 Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 0
BLAST of Carg22312 vs. TAIR 10
Match: AT1G14760.3 (KNOX Arabidopsis thaliana meinox ) HSP 1 Score: 55.1 bits (131), Expect = 5.8e-08 Identity = 36/111 (32.43%), Postives = 55/111 (49.55%), Query Frame = 0
BLAST of Carg22312 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 ) HSP 1 Score: 52.8 bits (125), Expect = 2.9e-07 Identity = 34/109 (31.19%), Postives = 52/109 (47.71%), Query Frame = 0
BLAST of Carg22312 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 ) HSP 1 Score: 51.6 bits (122), Expect = 6.4e-07 Identity = 50/152 (32.89%), Postives = 75/152 (49.34%), Query Frame = 0
BLAST of Carg22312 vs. TAIR 10
Match: AT1G14760.1 (KNOX Arabidopsis thaliana meinox ) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-06 Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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