Carg22101 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22101
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein O-glucosyltransferase 1 isoform X1
Location	Carg_Chr18: 11353276 .. 11353759 (+)
RNA-Seq Expression	Carg22101
Synteny	Carg22101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACAAGTCAAATTTCGCCGGACCACCTCTCCTCCGCCCACTGTCAACTGCGCCGGTGGGCCTGAAGCTGAAGAGTCGCAACGTTAAACAATGAGGGACGCCGGATTCCACCAGAGGTTTTCAAATTATGCCTCTTGGGTCTCTCGCCACTTCTCAGATCATCTCTTGAAGCCATCTCTCAAATCTCCGGCGAGATTCTCTCTCGTTCTCTTCTTCTCTCTCTTCCTCCTCGCCGGCGCGTTCCTCTCCACGCGTCTCCTCGATTCAAATGTAAGTTTCTTAATGCATAATAGTATTTTAAAAAAATTCCTTTTTTTTTTTTTTTTTTTTTGTCTAAATTCCGGAAATTAAGGAGGATTTTATTGATTTCAGAGGGCAGGGGGTAATTTTAGAGGGAGCAACAACACTTCCCAAATACCGAAAATGCCACTCCGACGACGACAAGTCGAATTCCCACTCGATTGCACGTCCTTCAATAACGTGA

mRNA sequence

CGACAAGTCAAATTTCGCCGGACCACCTCTCCTCCGCCCACTGTCAACTGCGCCGGTGGGCCTGAAGCTGAAGAGTCGCAACGTTAAACAATGAGGGACGCCGGATTCCACCAGAGGTTTTCAAATTATGCCTCTTGGGTCTCTCGCCACTTCTCAGATCATCTCTTGAAGCCATCTCTCAAATCTCCGGCGAGATTCTCTCTCGTTCTCTTCTTCTCTCTCTTCCTCCTCGCCGGCGCGTTCCTCTCCACGCGTCTCCTCGATTCAAATGGGGTAATTTTAGAGGGAGCAACAACACTTCCCAAATACCGAAAATGCCACTCCGACGACGACAAGTCGAATTCCCACTCGATTGCACGTCCTTCAATAACGTGA

Coding sequence (CDS)

ATGAGGGACGCCGGATTCCACCAGAGGTTTTCAAATTATGCCTCTTGGGTCTCTCGCCACTTCTCAGATCATCTCTTGAAGCCATCTCTCAAATCTCCGGCGAGATTCTCTCTCGTTCTCTTCTTCTCTCTCTTCCTCCTCGCCGGCGCGTTCCTCTCCACGCGTCTCCTCGATTCAAATGGGGTAATTTTAGAGGGAGCAACAACACTTCCCAAATACCGAAAATGCCACTCCGACGACGACAAGTCGAATTCCCACTCGATTGCACGTCCTTCAATAACGTGA

Protein sequence

MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSNGVILEGATTLPKYRKCHSDDDKSNSHSIARPSIT

Homology

[Close]

BLAST of Carg22101 vs. NCBI nr
Match: KAG7013233.1 (hypothetical protein SDJN02_25991 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-44
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60

Query: 61 GVILEGATTLPKYRKCHSDDDKSNSHSIARPSIT 95
          GVILEGATTLPKYRKCHSDDDKSNSHSIARPSIT
Sbjct: 61 GVILEGATTLPKYRKCHSDDDKSNSHSIARPSIT 94

[Close]

BLAST of Carg22101 vs. NCBI nr
Match: XP_022944811.1 (O-glucosyltransferase rumi homolog isoform X2 [Cucurbita moschata])

HSP 1 Score: 120.6 bits (301), Expect = 7.5e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. NCBI nr
Match: KAG6574177.1 (Protein O-glucosyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.6 bits (301), Expect = 7.5e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. NCBI nr
Match: XP_022944810.1 (protein O-glucosyltransferase 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 120.6 bits (301), Expect = 7.5e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. NCBI nr
Match: XP_022968464.1 (protein O-glucosyltransferase 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-23
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYA+WVSRHFSDHLLKPSLKSPARFSL+LFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYAAWVSRHFSDHLLKPSLKSPARFSLILFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. ExPASy TrEMBL
Match: A0A6J1FZ41 (O-glucosyltransferase rumi homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449238 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.6e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. ExPASy TrEMBL
Match: A0A6J1FZ46 (protein O-glucosyltransferase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449238 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.6e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. ExPASy TrEMBL
Match: A0A6J1HX90 (O-glucosyltransferase rumi homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467701 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYA+WVSRHFSDHLLKPSLKSPARFSL+LFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYAAWVSRHFSDHLLKPSLKSPARFSLILFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. ExPASy TrEMBL
Match: A0A6J1HZQ4 (protein O-glucosyltransferase 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467701 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MRDAGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLVLFFSLFLLAGAFLSTRLLDSN 60
          MRDAGFHQRFSNYA+WVSRHFSDHLLKPSLKSPARFSL+LFFSLFLLAGAFLSTRLLDSN
Sbjct: 1  MRDAGFHQRFSNYAAWVSRHFSDHLLKPSLKSPARFSLILFFSLFLLAGAFLSTRLLDSN 60

[Close]

BLAST of Carg22101 vs. ExPASy TrEMBL
Match: A0A5D3DHB1 (O-glucosyltransferase rumi-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00560 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-07
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 4  AGFHQRFSNYASWVSRHFSDHLLKPSLKSPARFSLV-LFFSLFLLAGAFLSTRLLDSN 61
          + F  RFS+YAS     FSDH+ KP +KSPA FSL+ LFFSLFLLAG FLSTRLL S+
Sbjct: 7  SSFLNRFSHYAS-----FSDHIFKPFIKSPATFSLLFLFFSLFLLAGIFLSTRLLHSS 59

The following BLAST results are available for this feature:

BLAST of Carg22101 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013233.1	1.7e-44	100.00	hypothetical protein SDJN02_25991 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944811.1	7.5e-24	100.00	O-glucosyltransferase rumi homolog isoform X2 [Cucurbita moschata]	[more]
KAG6574177.1	7.5e-24	100.00	Protein O-glucosyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944810.1	7.5e-24	100.00	protein O-glucosyltransferase 1 isoform X1 [Cucurbita moschata]	[more]
XP_022968464.1	2.2e-23	96.67	protein O-glucosyltransferase 1 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg22101 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg22101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ41	3.6e-24	100.00	O-glucosyltransferase rumi homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1FZ46	3.6e-24	100.00	protein O-glucosyltransferase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HX90	1.1e-23	96.67	O-glucosyltransferase rumi homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HZQ4	1.1e-23	96.67	protein O-glucosyltransferase 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5D3DHB1	4.0e-07	65.52	O-glucosyltransferase rumi-like protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Carg22101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22101-RA	Carg22101-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity