![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Carg22017 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTCATTTAGTTGGTGGGACTGCGATCTTCTTTTGTCCAATCTTATGGCCGATGCCGCTTCGGCTTAATTATCTCTCACCCATTTTTCAACCAAGCCTCTTTACTTTCTTTCCTTCGTTTCTTCATTCGTTCATTAATTAATTTCTTCTCCTTTCTCTCTAGAAATTCTCTGAACCTCTCTCTGCATTCTATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGGTGAGTTCTTCAAAACCCCTTTTCTCTTCTCTCTGTTCCTTTCTTTTCTGGGTTTTTTTTTTTTTTTTTTTTGTTTTGTTTTAATCTTCGCTTAATTGCGTGATTGATCGTTGTTTCCGAAGCTGTTGGGTTTATTGGGACTTTTGGAATTGTGGGTTTTCTTGTTTGGAGTTTGGGTTTTGATGGAATTGTTGTTTAGTGATCGTTTAGTGATGGGGTTGATTCCTTAGATTCGAATTCTTATTGGCCGTGTGTTTGATTGGATTATTTGGTGGTCTTTCAAATAACAATGAAGCTTCTCTAACCTATTTGACCAAGTTATTTAAATTTATTGTTGTTATGAGTCATGGATGATCGAATTAGTTCATATAACGAAAGGGATGAATGCAATTTTAAACTTGGAACTGTGGATCCGCGGCTGATGAATTTTGAGAAGGAACCTAAGTTCTAATTGACTAATGACCCTTTTCCAATCTCCTGACGAACTTCAAAAATATCACAACCACTTCAGGTTATGACCGTGGCATGCCAGTCTTTAGAAGTAGGGTGAATGTTCTTTGCTTATCTCTCAGAAACAACTTTTGCGGAACTGTTAAGTATCAAATCATCTAGTCCTCTAGAATCTTCATCTTGTTAATTTGAAGATATTTTTCATTTTTATGCTTGTTTGAACTAATTACTGCTCTGAGAATGTTGTCTGCTTGGATTACTGCATTGTGAAATTGATTTCAGTCATTTAGAGTTGTAAAATATTTCGTTTTCTTACAAGTTCATGTACCTTGTTATTGCAACCTGTTTGAAATCAAGATTGCACAGTTGGTATGCATCACTCTGCATTCTGGATGCACAACAACCTATTTCAACGATCAAGTTGCCTTCGAATCTACATCAATCTTGCTAAAGAATGATGTCAGGCCCTATAAAGCTTCATCCTATTTATCGATATTGTTATCCACTCCAAATTAGCAAGTTGATTGAACCTAAGAAGGAAAATATAAGTAAGATTAAGAGAAAAAAAAGATGGATAATGAAAGCCTAGTGAACTTAGATTCAGTTAGTGCAACTGCCAACACAATACCCACGAAGGAACATCTAGCCCGCCAACTTATGTAGCTGGAACTCGACTACAATTTGCTAGCCAGGATTGTTGCTCGGAGTGCAAGGGTACTGGTGTTAATTTTAACCCTGTAAACAGTAACCCTGTTTCAGACATCTCTTGATGACTAGTGGTTAGATAGCTTAGATATTCACCTTTATGTAGATGTTCCAACAACTGAGGATATTATTCAGTATGTTTTCGAATGCAAGTCCAACTTATGATCAATTGTGGAGGCTTAGAAAAAGGGGTCGAGAATATACAGATACAGGAGGGTGATGAAAATTTCCCTCCCATTGATTATCCATGTACAGAAGGAAAAGAAAGCTGACTTGTGGATTAGCTAATGAAAATGGTAGCTCCTTGGTGAGGGAGGAAGGTATTGAACCTATGATTATCATGAGCTGGGTTTTTACCTTCACATCTATTTTATCCAGACCCTCAACTCTCGTCTCTTGTATTCAATTAGTTGTTGGCAACAACAATTGCCATTTACTGGTTGAAAATCAAATAACAGGAAGCAAATTGAGTTCCTCATCGTTCGTTCCGTTGTCCGCTACTTTTTGTGGTTTGTGTGACATAGTCCTCAATGATATTTCCTTATCATTTCTTTGCCTTTATCAACCTGATAAACTGTGAGTGGTCCAACCTTTAGTGCTTCATCACGTAGCCTCTATGAATTGACAATATGATCGAACTGTTGGCTCAACTTTTAACCAGTGCTTGGAGTGGCTTGTTTTCTTATTCCTTATTTTCTTTCCACTTTTGTGGTTTGGTTCCGGTTTAGTCAGAAAATCTAATCCTATTGAATCGAACTGCATACACCTTTAGAGACAGCTACCATGTGTTGCAACTTTGAAGTATGATAGTTTTAGCTTGCTAACTATTGTCTTCGCTTGACTGATCCATACGTCTGTTTGTTTGCAGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGTGATGGAACTGTGAGCTATGGCATGGATGATCCAGATGACTTATTAATGCAGTCTTGGACTGGGACCATTATTGGTCCACCTAATGTAAGTTTCGACTTTTCTGCTTTTGGGTTGCCATCTTTTTCTTGTTTTCCTGAAAATTTTGAGTATTCAATTCAAGTTTGAAGTCGATGTCTTCGCGTTCTCAGAGAAAGTGGATTTTATTTGCTCCTAAGTTGCACTTTTTATGAAGATCTTGTCATATTTTAAAAAAATGTATGGAAAGAAGATGGCTGCAGTTTCCCTTAAGCTATTTGTTTCACTTAAAGAAAATTGATGGCCTGATGTGTTGTGTGTTTTTAGACTGTTCATGAAGGGAGAATCTACCAACTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCGGCTGTTAGATTCCAAAGTAGGATAAACATGTCCTGTGTCAATCCAGAAACTGGAATGGTATGAACCATTTCTGTAGCCATTTGTAGCCATTTCATAATTTGAAATAATGAATGCTTGCTGTAATTACCAGGTTGAAAGGAACCTTCTCCCCATGCTTGCTAAATGGCAAAGGGAATATACAATGGAGGATATATTGACTCAACTGAAGAAAGAAATGATGTCATCTCATAATCGGAAGCTTGTTCAGCCTCTTGAAGGTTCTTACTTTATTTTCCAATTAAAATTGTTCATACAATTGCTTAAGAGACGAGACATCTATAACAGTTAGAATTAACATGTATTAGTCTCTTAACTCTATTTAGTTTGTGTCTAGCTTAAGTTGTATTTCTTGGATTTCTTTGTTTAAAATCATTTTTCAAACTGATGATTCAAATCGGCTTCTCGTGTTTTAAATCTCGTTTATTTTTCCACTTATAAATTTTAAAAATACCACCCCCATTCTTAAATTGTTTTTACCATTTCAAGACCTTACTTCGGAACAACCCAAGCCTACCACTAGCTGATATTGTCCTCTTTGGGCTTTTCTTTTCGGGCTTCCCCTCAAGATTTTTAGATCACGTCTTCTAGGGAGAGGTTCCACACTCTTATAAAAAAATGTTTCGTTCTCCTTCCTAATACTTTGTATACTCTTCTTACTGCTAACTTGGGTATGAAGCGTGCGTGACATTCTGTGGTTAAGTTAGTATATCATCTAATCAGGTTTGTGATGATTTAATGACATTTTCAGGTAATGAAGAGGGAAGGACGGAGCAAAAGGGTCTGGTCCTGAAATGTTGCATTCTTTGATTCAGGTCAGAATTTGATGCAACATAATTGCATGACATGATTAAGTTATGATCAGGGAGATCAACATAACTGGTGACTGATCCCATATATCATCTCCAATTCTCTTTCGACAGCGCATATAATTTTTAAACCTGACACCTTGTCATGATAGACTGCATTTACATGATGTTTTCTTTATGCATTGCATCATATCTTCAAATTGAACTAGGACAACCCTTCTCGAATATGAACATATGGACCCAGAACCAAGCATGTTTCCTTTATTAAGTGTTTGATCAAATTGTAGGTATAGTCCCTAGGATTGTGTCTATTTAGCACCCACACTTTAACGAGTTTCTAAGAGGTCTCTACGTTGAGCTCGGTTAGCCCTCCAGACTTTAATACCAGTTAGTTGACTGACAGAATTGATTATAGTAGTCTATTAACAGATTGGGTGTCTAAAATCTTGAAAATCCTATTAGAAACGTAGACATATTCTGAAAAGTTGAGGGGCCAAATTTGTAAGTAATGGTATGTTGATATCCGTAACTGCAGATTTTGGGAAAGACTGAGGCGTACAAGGAGCATCAGATAGCAGTATGGCAAAGGCTTGTTGTAGTTTCAGCTACCTCCGTTTATAGCTGTTAACATAGCAATATGAATTTGGTAAGCTCTGAAAGAGCGAGCTTGGTTTCTAAAGTAAATGATGTGTTATCTTACATATGAATCTGGAAGATTGATGGATTTTCTGATATGTTCTGGTCTGTGTAAATGAGTTAATATATCAAAGTTTGAAGTTGAAAACAAATCACTATGGTCATGGGATTCACAAAATGAAAGCACATATAAATACGGAATTCTACTGTTAATTTGTGACACAAACTAGAGATGTTCATTTTTCTTGTTTCTTGTTCTCGAATAAATGTTTTTTTTTAATATTAAAATTTATGAGATATTGTTTGAACCATGGTAGACTCTTTTATACTATAATTATTATTATTTTTTTTT AGTCATTTAGTTGGTGGGACTGCGATCTTCTTTTGTCCAATCTTATGGCCGATGCCGCTTCGGCTTAATTATCTCTCACCCATTTTTCAACCAAGCCTCTTTACTTTCTTTCCTTCGTTTCTTCATTCGTTCATTAATTAATTTCTTCTCCTTTCTCTCTAGAAATTCTCTGAACCTCTCTCTGCATTCTATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGTGATGGAACTGTGAGCTATGGCATGGATGATCCAGATGACTTATTAATGCAGTCTTGGACTGGGACCATTATTGGTCCACCTAATACTGTTCATGAAGGGAGAATCTACCAACTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCGGCTGTTAGATTCCAAAGTAGGATAAACATGTCCTGTGTCAATCCAGAAACTGGAATGGTTGAAAGGAACCTTCTCCCCATGCTTGCTAAATGGCAAAGGGAATATACAATGGAGGATATATTGACTCAACTGAAGAAAGAAATGATGTCATCTCATAATCGGAAGCTTGTTCAGCCTCTTGAAGGTAATGAAGAGGGAAGGACGGAGCAAAAGGGTCTGATTTTGGGAAAGACTGAGGCGTACAAGGAGCATCAGATAGCAGTATGGCAAAGGCTTGTTGTAGTTTCAGCTACCTCCGTTTATAGCTGTTAACATAGCAATATGAATTTGGTAAGCTCTGAAAGAGCGAGCTTGGTTTCTAAAGTAAATGATGTGTTATCTTACATATGAATCTGGAAGATTGATGGATTTTCTGATATGTTCTGGTCTGTGTAAATGAGTTAATATATCAAAGTTTGAAGTTGAAAACAAATCACTATGGTCATGGGATTCACAAAATGAAAGCACATATAAATACGGAATTCTACTGTTAATTTGTGACACAAACTAGAGATGTTCATTTTTCTTGTTTCTTGTTCTCGAATAAATGTTTTTTTTTAATATTAAAATTTATGAGATATTGTTTGAACCATGGTAGACTCTTTTATACTATAATTATTATTATTTTTTTTT ATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGTGATGGAACTGTGAGCTATGGCATGGATGATCCAGATGACTTATTAATGCAGTCTTGGACTGGGACCATTATTGGTCCACCTAATACTGTTCATGAAGGGAGAATCTACCAACTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCGGCTGTTAGATTCCAAAGTAGGATAAACATGTCCTGTGTCAATCCAGAAACTGGAATGGTTGAAAGGAACCTTCTCCCCATGCTTGCTAAATGGCAAAGGGAATATACAATGGAGGATATATTGACTCAACTGAAGAAAGAAATGATGTCATCTCATAATCGGAAGCTTGTTCAGCCTCTTGAAGGTAATGAAGAGGGAAGGACGGAGCAAAAGGGTCTGATTTTGGGAAAGACTGAGGCGTACAAGGAGCATCAGATAGCAGTATGGCAAAGGCTTGTTGTAGTTTCAGCTACCTCCGTTTATAGCTGTTAA MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMSCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMMSSHNRKLVQPLEGNEEGRTEQKGLILGKTEAYKEHQIAVWQRLVVVSATSVYSC Homology
BLAST of Carg22017 vs. NCBI nr
Match: KAG7030593.1 (Ubiquitin-conjugating enzyme E2 variant 1B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375.6 bits (963), Expect = 2.5e-100 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg22017 vs. NCBI nr
Match: XP_022943228.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_022990538.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima] >XP_023516004.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita pepo subsp. pepo] >XP_023516754.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita pepo subsp. pepo] >KAG6599914.1 Ubiquitin-conjugating enzyme E2 variant 1B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 320.5 bits (820), Expect = 9.6e-84 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22017 vs. NCBI nr
Match: XP_022990687.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima]) HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Carg22017 vs. NCBI nr
Match: XP_008464712.1 (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_008464713.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_038893127.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Benincasa hispida]) HSP 1 Score: 312.4 bits (799), Expect = 2.6e-81 Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Carg22017 vs. NCBI nr
Match: XP_022942022.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_023516869.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita pepo subsp. pepo] >KAG6600841.1 Ubiquitin-conjugating enzyme E2 variant 1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031476.1 Ubiquitin-conjugating enzyme E2 variant 1B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 312.0 bits (798), Expect = 3.4e-81 Identity = 149/154 (96.75%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy Swiss-Prot
Match: Q9CAB6 (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 5.3e-69 Identity = 120/154 (77.92%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy Swiss-Prot
Match: Q93YP0 (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 1.7e-67 Identity = 117/151 (77.48%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy Swiss-Prot
Match: Q9SVD7 (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 6.3e-62 Identity = 112/141 (79.43%), Postives = 122/141 (86.52%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy Swiss-Prot
Match: Q9SJ44 (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.2e-60 Identity = 110/137 (80.29%), Postives = 120/137 (87.59%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy Swiss-Prot
Match: Q54D06 (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=44689 GN=ube2v PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.2e-42 Identity = 75/132 (56.82%), Postives = 101/132 (76.52%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy TrEMBL
Match: A0A6J1JTK4 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111487383 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy TrEMBL
Match: A0A6J1FWK4 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111448021 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy TrEMBL
Match: A0A6J1JJH8 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111487499 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 5.7e-82 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy TrEMBL
Match: A0A1S3CM86 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC103502532 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81 Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Carg22017 vs. ExPASy TrEMBL
Match: A0A6J1FP33 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447210 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81 Identity = 149/154 (96.75%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Carg22017 vs. TAIR 10
Match: AT1G70660.1 (MMS ZWEI homologue 2 ) HSP 1 Score: 261.9 bits (668), Expect = 3.8e-70 Identity = 120/154 (77.92%), Postives = 139/154 (90.26%), Query Frame = 0
BLAST of Carg22017 vs. TAIR 10
Match: AT1G23260.1 (MMS ZWEI homologue 1 ) HSP 1 Score: 256.9 bits (655), Expect = 1.2e-68 Identity = 117/151 (77.48%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of Carg22017 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 251.9 bits (642), Expect = 3.9e-67 Identity = 114/149 (76.51%), Postives = 135/149 (90.60%), Query Frame = 0
BLAST of Carg22017 vs. TAIR 10
Match: AT1G70660.2 (MMS ZWEI homologue 2 ) HSP 1 Score: 248.4 bits (633), Expect = 4.3e-66 Identity = 114/144 (79.17%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of Carg22017 vs. TAIR 10
Match: AT3G52560.1 (ubiquitin E2 variant 1D-4 ) HSP 1 Score: 238.4 bits (607), Expect = 4.4e-63 Identity = 112/141 (79.43%), Postives = 122/141 (86.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|