Carg21964 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGACCGAGTCAACTCTGTCATCGCCAAGCTACCCAATTTCGCCACTTTCAATGGCGGACCCACGAGCATCACTGTCATCTCTATCTTCACCGCCGTCTTTGCCTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTGATCTCCAATTTCGCCCTTTCAGGTTTATTCTATAATCTCCGCCTTCTGCATTTTCGTTTTACTCGCATTCGTGATGGGGCGTCTTTTTTTTAATCCCAATGTTGATTGTTAACCTCCCCAGATCTTCGAACTTGAAATGATTCTGAGAGATGAGAAATGGAGTTTGTGATGGAAAAGAACTGTATGTTCAATGTTTTAGTTCTGGCACGCAAGGTGTTTGATGTAATGACTGAGTTGAATTTCTTTGTGTGGTTATGAGATATATTGCTAATTGCTATTGCCGCGATTTCTTGGTGGAATATCCTTGCTTTTTCTGTCTAAATGCTTCTTTTTCGGCAAGATTGTTGTCTATAGTATTAATTGACACTCCATGTTCCAGCCACATTCGTAGGTAAAGTGGACGCTTTCTTTTATTTGGAAATATCTGAGCTTACCTTCGCTGAGACATGATAAAGATGGTATTTATTGAGGGAAATGTATATGTACAAGCAGTCCTATTGAAGTTGTTATTGCCTGATCTTTATGTTTTAATTCAAAAGGGAAGATTGCTGAGAAAATGTGTCGATAATCTACCATGGCGTGATACTATAGCCACCATAGTGTTGTTGCATATGCATAGAAGTTAGCTAGTAAAAAATTGGTCTAAGTTATTTCTTAGTTCTTCCAGGTTCTACACCTTCTATATGCTCCACTAAAATTATTGAACTTCACTTGTTAGAGTTTTACTCTTAGCTACACACAGGGATTTCTTCTAAGATATGGGGTGATTCTCTGTTTATGAGGGAGGGACATGCATTAGGATTTTCGAGTATGGTAAGCTTGAAAATTAAATTTGTGATATTCCACAGAAGATACCCGAATCAAAGGGCGTAGGAATGCTTGTTCAAAGTCGTGATCCTCCATTCGATTTCGAGAAATATTTTCATTTCTATTTATAGAACATCTCAAATCAGATACATAACCAATTAATGGTTCATGAAAGCCGTTTTTCTTTTAGATTGTGATATGTTCAATTCACATGTCTTACAAGTTCTTTTGAATTTTCAAATTAATGTTTGAGGGACCTTGCTTCAAGAGGAGAGAAAGAGGAAGATATAGTCTCTCCATATTCTCATTTAAGCAAGGTACAACCTTAGATGGTGCCTTTCTCATGTTGTCCATTGGCTCGAGTTAGACGAGAACTAGCTTATTGATGAGGTGATAACCAAGATCAGCTATTCAATTTTCATTTCCGGATGAACCAGGAAAGTTACAAGTCTTGAATCTGGATTCTAGCACCGTCCTTCACTGTTTCTCCTTGAAGCAGTCATAGTTCTCTTCTTTTCTTCCCAGTATTATTCTTTATCCAAGGGCATTTGCAGGGATTTTAAAACATCTCAATCTCCTTGCTCTGATTCCTTCCTTGTCATAATGATTTTTTTTTGTTGTCACTTCCTTTAGAAGTTATGCTTCCAGTTTCATTTTCAACGCGGTAACACGTTGTAAAGCTCTGGATATTGATCGGTGCATTCATTCTGTCTATGGAAAATCTTTTGAAATCTCTTCCTGAACTCTATGAAGAATATTCCATATCCGATTAGAATTTTTGAGACAGAAAGTTAATAACCTTGCGTATTTTATTCAATAGAGGCAAGGGCATATATATAGCCACTTAATGATACAACAGAATTATTACAAAGTACTAAATCTAATAAGAGTCTCCATTCCGAGAGTTTTCTGTTCAAATGCCAAGAGCAAGTTCTCCCGTTTCTTTTGTGGCCATATTTGCCCCTGCACTTTCATTTGCTTTGGGTCTATGCAGAAAAAGCTTTGATCTCAGATCTCTCATTCGAAAGAATTCAGAGGATTTTGAACGCAGACATTGTTATTGGTTTGATCGTTCGAGTCAGCTCATTCCAAAGCCTCTCTTTGGTTTTATTTACAAGATATATTCTAAATTGGAAAGCTTTTATCCTTTGTAACTTTATTTTCCAACTCCATTTGGAGTTCGTATTCAAAGCTTTGTTTCTTGTTAAAAAAATTTCTAGAACTTCAGTAGGAGGAACAGTTACTGCTGCCACATGACAGCATTTAGTTGATTTTTAACTTCAGACATGTGTTTTCGACATTTACTGCTGCAACTGATGTGTATTCCTTACCTTGCAGCCTACATGTTTGCAAGTGCAAGGAAGAAGGACTTGGGGCAAATGGAGAATGATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAATAGAAAAATGCAGTGATAGTGAAATAATGGAAATACCCTCAACGTTTATGGTGGATACCACTGGCATAGTTACAGAGAACATCTCGGAAGATCAGCACCAAAAACCATTCCACTGGATTGTCGATGGTTGGAGAGAAAAAACAGGTTCGAGTAAAAAATGAATTGGTAGGTTAGAAGCTGATTCTTGAACGGCTCAATGTTCATCCTCTCCAAACTTACAGATTTGATTCACTGTTTAATGGCGATTTAAGAGATAATCTCTGCTCTCTAAAGTTTGTTTCAATGTTTGTATTTCATATTTTGATTAATTGGGCTGTTGTTCATAAACTAGTTGTACCTCGTGTTTTGTGTTGTATTTGACGCAATATCTACTCCTCAAAAGTGTGAATAGATATGAAAATATTATTACTCAACTAA AAGACCGAGTCAACTCTGTCATCGCCAAGCTACCCAATTTCGCCACTTTCAATGGCGGACCCACGAGCATCACTGTCATCTCTATCTTCACCGCCGTCTTTGCCTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTGATCTCCAATTTCGCCCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAAGGACTTGGGGCAAATGGAGAATGATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAATAGAAAAATGCAGTGATAGTGAAATAATGGAAATACCCTCAACGTTTATGGTGGATACCACTGGCATAGTTACAGAGAACATCTCGGAAGATCAGCACCAAAAACCATTCCACTGGATTGTCGATGGTTGGAGAGAAAAAACAGGTTCGAGTAAAAAATGAATTGGTAGGTTAGAAGCTGATTCTTGAACGGCTCAATGTTCATCCTCTCCAAACTTACAGATTTGATTCACTGTTTAATGGCGATTTAAGAGATAATCTCTGCTCTCTAAAGTTTGTTTCAATGTTTGTATTTCATATTTTGATTAATTGGGCTGTTGTTCATAAACTAGTTGTACCTCGTGTTTTGTGTTGTATTTGACGCAATATCTACTCCTCAAAAGTGTGAATAGATATGAAAATATTATTACTCAACTAA ATGGCGGACCCACGAGCATCACTGTCATCTCTATCTTCACCGCCGTCTTTGCCTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTGATCTCCAATTTCGCCCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAAGGACTTGGGGCAAATGGAGAATGATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAATAGAAAAATGCAGTGATAGTGAAATAATGGAAATACCCTCAACGTTTATGGTGGATACCACTGGCATAGTTACAGAGAACATCTCGGAAGATCAGCACCAAAAACCATTCCACTGGATTGTCGATGGTTGGAGAGAAAAAACAGGTTCGAGTAAAAAATGA MADPRASLSSLSSPPSLPPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENDEAEKDLGQLENDGIEKCSDSEIMEIPSTFMVDTTGIVTENISEDQHQKPFHWIVDGWREKTGSSKK Homology
BLAST of Carg21964 vs. NCBI nr
Match: KAG6588036.1 (hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021933.1 hypothetical protein SDJN02_15661 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 254.2 bits (648), Expect = 5.8e-64 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Carg21964 vs. NCBI nr
Match: XP_023530326.1 (uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251.9 bits (642), Expect = 2.9e-63 Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Carg21964 vs. NCBI nr
Match: XP_022968528.1 (uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]) HSP 1 Score: 250.4 bits (638), Expect = 8.4e-63 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Carg21964 vs. NCBI nr
Match: XP_022926648.1 (uncharacterized protein LOC111433716 [Cucurbita moschata]) HSP 1 Score: 248.4 bits (633), Expect = 3.2e-62 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Carg21964 vs. NCBI nr
Match: XP_004135711.1 (uncharacterized protein LOC101210247 isoform X1 [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 5.3e-33 Identity = 82/127 (64.57%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of Carg21964 vs. ExPASy TrEMBL
Match: A0A6J1HYA0 (uncharacterized protein LOC111467730 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467730 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 4.1e-63 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Carg21964 vs. ExPASy TrEMBL
Match: A0A6J1EIP0 (uncharacterized protein LOC111433716 OS=Cucurbita moschata OX=3662 GN=LOC111433716 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Carg21964 vs. ExPASy TrEMBL
Match: A0A0A0M1X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G587470 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.6e-33 Identity = 82/127 (64.57%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of Carg21964 vs. ExPASy TrEMBL
Match: A0A1S3BR82 (uncharacterized protein LOC103492320 OS=Cucumis melo OX=3656 GN=LOC103492320 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 77/127 (60.63%), Postives = 90/127 (70.87%), Query Frame = 0
BLAST of Carg21964 vs. ExPASy TrEMBL
Match: A0A6J1D315 (uncharacterized protein LOC111016544 OS=Momordica charantia OX=3673 GN=LOC111016544 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28 Identity = 74/115 (64.35%), Postives = 83/115 (72.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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