
Carg21952 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATTTCAAATCCAACTCCTATGTGGATGGAAGAATGCAGATTGAGAACTACTATGGAAACGAATCAAGAGGAGGACCGAACGGTTCCGGCGGAATGGGTATGCAAGATTTTCGTTGTTACAGTGCGTCGTATGCTTCGTCTGCGAATCCAACTCAGATGGGGAATGATTTGAAGCTCAAGAAAGGGAAATCGACGAATGGATTCTCGTCGAAGAGCTGGAGTTTCAACGATCCGGAGATGCAGAGAAAGAGGAGGGTTGCTAGCTACAAGGTTTATACTGTGGAAGGCAAAGTCAAAGGGTCTTTTAGAAAGAGCTTCAGGTGGCTCAAGGAAAGATGCTCTCGAATGGTCTTTGGATGGTAA ATGGAGGATTTCAAATCCAACTCCTATGTGGATGGAAGAATGCAGATTGAGAACTACTATGGAAACGAATCAAGAGGAGGACCGAACGGTTCCGGCGGAATGGGTATGCAAGATTTTCGTTGTTACAGTGCGTCGTATGCTTCGTCTGCGAATCCAACTCAGATGGGGAATGATTTGAAGCTCAAGAAAGGGAAATCGACGAATGGATTCTCGTCGAAGAGCTGGAGTTTCAACGATCCGGAGATGCAGAGAAAGAGGAGGGTTGCTAGCTACAAGGTTTATACTGTGGAAGGCAAAGTCAAAGGGTCTTTTAGAAAGAGCTTCAGGTGGCTCAAGGAAAGATGCTCTCGAATGGTCTTTGGATGGTAA ATGGAGGATTTCAAATCCAACTCCTATGTGGATGGAAGAATGCAGATTGAGAACTACTATGGAAACGAATCAAGAGGAGGACCGAACGGTTCCGGCGGAATGGGTATGCAAGATTTTCGTTGTTACAGTGCGTCGTATGCTTCGTCTGCGAATCCAACTCAGATGGGGAATGATTTGAAGCTCAAGAAAGGGAAATCGACGAATGGATTCTCGTCGAAGAGCTGGAGTTTCAACGATCCGGAGATGCAGAGAAAGAGGAGGGTTGCTAGCTACAAGGTTTATACTGTGGAAGGCAAAGTCAAAGGGTCTTTTAGAAAGAGCTTCAGGTGGCTCAAGGAAAGATGCTCTCGAATGGTCTTTGGATGGTAA MEDFKSNSYVDGRMQIENYYGNESRGGPNGSGGMGMQDFRCYSASYASSANPTQMGNDLKLKKGKSTNGFSSKSWSFNDPEMQRKRRVASYKVYTVEGKVKGSFRKSFRWLKERCSRMVFGW Homology
BLAST of Carg21952 vs. NCBI nr
Match: XP_022933710.1 (uncharacterized protein LOC111441046 [Cucurbita moschata] >XP_022933711.1 uncharacterized protein LOC111441046 [Cucurbita moschata] >XP_022968547.1 uncharacterized protein LOC111467745 [Cucurbita maxima] >XP_022968557.1 uncharacterized protein LOC111467745 [Cucurbita maxima] >XP_023531244.1 uncharacterized protein LOC111793547 [Cucurbita pepo subsp. pepo] >XP_023531245.1 uncharacterized protein LOC111793547 [Cucurbita pepo subsp. pepo] >KAG6588051.1 hypothetical protein SDJN03_16616, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021945.1 hypothetical protein SDJN02_15673, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251.9 bits (642), Expect = 2.8e-63 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg21952 vs. NCBI nr
Match: XP_004144117.1 (uncharacterized protein LOC101207995 [Cucumis sativus] >KGN66259.1 hypothetical protein Csa_007550 [Cucumis sativus]) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of Carg21952 vs. NCBI nr
Match: XP_008450877.1 (PREDICTED: uncharacterized protein LOC103492339 [Cucumis melo] >KAA0055810.1 uncharacterized protein E6C27_scaffold181G002000 [Cucumis melo var. makuwa] >TYK10061.1 uncharacterized protein E5676_scaffold16G001950 [Cucumis melo var. makuwa]) HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51 Identity = 108/122 (88.52%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Carg21952 vs. NCBI nr
Match: XP_038878627.1 (uncharacterized protein LOC120070815 [Benincasa hispida]) HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51 Identity = 108/124 (87.10%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Carg21952 vs. NCBI nr
Match: XP_022147659.1 (uncharacterized protein LOC111016528 [Momordica charantia]) HSP 1 Score: 202.6 bits (514), Expect = 1.9e-48 Identity = 106/124 (85.48%), Postives = 111/124 (89.52%), Query Frame = 0
BLAST of Carg21952 vs. ExPASy TrEMBL
Match: A0A6J1HTT0 (uncharacterized protein LOC111467745 OS=Cucurbita maxima OX=3661 GN=LOC111467745 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg21952 vs. ExPASy TrEMBL
Match: A0A6J1EZU0 (uncharacterized protein LOC111441046 OS=Cucurbita moschata OX=3662 GN=LOC111441046 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Carg21952 vs. ExPASy TrEMBL
Match: A0A0A0LYX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G589660 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.3e-53 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of Carg21952 vs. ExPASy TrEMBL
Match: A0A5A7UKZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001950 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51 Identity = 108/122 (88.52%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Carg21952 vs. ExPASy TrEMBL
Match: A0A1S3BPN1 (uncharacterized protein LOC103492339 OS=Cucumis melo OX=3656 GN=LOC103492339 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51 Identity = 108/122 (88.52%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Carg21952 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 118.2 bits (295), Expect = 4.5e-27 Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of Carg21952 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24 Identity = 66/123 (53.66%), Postives = 80/123 (65.04%), Query Frame = 0
BLAST of Carg21952 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14 Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of Carg21952 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 67.4 bits (163), Expect = 9.1e-12 Identity = 45/104 (43.27%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of Carg21952 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 64.7 bits (156), Expect = 5.9e-11 Identity = 27/49 (55.10%), Postives = 41/49 (83.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|