Carg21943 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21943
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Hydroxyproline-rich glycoprotein family protein
Location	Carg_Chr11: 3226425 .. 3227345 (+)
RNA-Seq Expression	Carg21943
Synteny	Carg21943

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCAAACAGCGACCCACCACCGTACTGGTCGCCGCCGACGATGCACCGCCGTAGATCCTCGTCTCCGCCGTTTATTTCTTTGCCGGTTTTGATTATTCTCTTGCCGACGCTCGCTTTGATTATATTGTTCTTTGCAATCCGTCCTCTTCTTTCGCTCACTCCTCAGCTTTTTAGACCAAATTCGGTGAAGAAGAGCTGGGATTCTTTCAATGTTTTTCTTCTTTTGATTGCGATTATCTGCGGGATTTTTGCTAGAAGAAACGACGACGTACCGACCGCCGCTGATGTCGACGGTAGTCGTCGTTCTGATCGCAGGACGGTTGATGCTGCCGGAGTTAAGGTGAACGGGGACTTGGAGTTTCCGCAGCAGTGGTTTGGATTTGCAGAGAGGAGATTTTCCGAACAGTCTGGGAGAACGCCGGGAACGGCGATGAGGTTGAGGAGGAATAGCTCTTATCCAGATCTGAGGCAGGAATCGCCGTGGGAAACTGGTAACGATGGTAATCAGTTTCGATTCTATGATGATTTTGAAATTAACAAGTTTCGATCACGATCCTTCGCGTATCGAACGCGAGGAAGTGAAATAGAAGAATCGCCGGCGGAGATTAAGGTTATTCCGGTTGATTCGTTTGTGGCTAATTCGTCGCCGACGCCTCAAAGGTTGATGTCTTCCAATCCGCCGCCTCCACCGCCTCCGCCGTTGCCGGTTACTCAGAGGAAATCGAGACGGACATATCAGACCATCCAGAGAAAGGAGGAAGTTCAAGAGGACAATACGAATGACGCTGAATTCGCGAAGTCGTATACGCCGCCGTCTCCGCCTCCGCTGCCTCCGCGAACGGTTATCCCTCCATCGCCGGTCCGAGTTCGACTGGAGGAGAGATTTGGAAGGAGTGAACGGAAAAACAAATGTTAA

mRNA sequence

ATGGAGCCAAACAGCGACCCACCACCGTACTGGTCGCCGCCGACGATGCACCGCCGTAGATCCTCGTCTCCGCCGTTTATTTCTTTGCCGGTTTTGATTATTCTCTTGCCGACGCTCGCTTTGATTATATTGTTCTTTGCAATCCGTCCTCTTCTTTCGCTCACTCCTCAGCTTTTTAGACCAAATTCGGTGAAGAAGAGCTGGGATTCTTTCAATGTTTTTCTTCTTTTGATTGCGATTATCTGCGGGATTTTTGCTAGAAGAAACGACGACGTACCGACCGCCGCTGATGTCGACGGTAGTCGTCGTTCTGATCGCAGGACGGTTGATGCTGCCGGAGTTAAGGTGAACGGGGACTTGGAGTTTCCGCAGCAGTGGTTTGGATTTGCAGAGAGGAGATTTTCCGAACAGTCTGGGAGAACGCCGGGAACGGCGATGAGGTTGAGGAGGAATAGCTCTTATCCAGATCTGAGGCAGGAATCGCCGTGGGAAACTGGTAACGATGGTAATCAGTTTCGATTCTATGATGATTTTGAAATTAACAAGTTTCGATCACGATCCTTCGCGTATCGAACGCGAGGAAGTGAAATAGAAGAATCGCCGGCGGAGATTAAGGTTATTCCGGTTGATTCGTTTGTGGCTAATTCGTCGCCGACGCCTCAAAGGTTGATGTCTTCCAATCCGCCGCCTCCACCGCCTCCGCCGTTGCCGGTTACTCAGAGGAAATCGAGACGGACATATCAGACCATCCAGAGAAAGGAGGAAGTTCAAGAGGACAATACGAATGACGCTGAATTCGCGAAGTCGTATACGCCGCCGTCTCCGCCTCCGCTGCCTCCGCGAACGGTTATCCCTCCATCGCCGGTCCGAGTTCGACTGGAGGAGAGATTTGGAAGGAGTGAACGGAAAAACAAATGTTAA

Coding sequence (CDS)

ATGGAGCCAAACAGCGACCCACCACCGTACTGGTCGCCGCCGACGATGCACCGCCGTAGATCCTCGTCTCCGCCGTTTATTTCTTTGCCGGTTTTGATTATTCTCTTGCCGACGCTCGCTTTGATTATATTGTTCTTTGCAATCCGTCCTCTTCTTTCGCTCACTCCTCAGCTTTTTAGACCAAATTCGGTGAAGAAGAGCTGGGATTCTTTCAATGTTTTTCTTCTTTTGATTGCGATTATCTGCGGGATTTTTGCTAGAAGAAACGACGACGTACCGACCGCCGCTGATGTCGACGGTAGTCGTCGTTCTGATCGCAGGACGGTTGATGCTGCCGGAGTTAAGGTGAACGGGGACTTGGAGTTTCCGCAGCAGTGGTTTGGATTTGCAGAGAGGAGATTTTCCGAACAGTCTGGGAGAACGCCGGGAACGGCGATGAGGTTGAGGAGGAATAGCTCTTATCCAGATCTGAGGCAGGAATCGCCGTGGGAAACTGGTAACGATGGTAATCAGTTTCGATTCTATGATGATTTTGAAATTAACAAGTTTCGATCACGATCCTTCGCGTATCGAACGCGAGGAAGTGAAATAGAAGAATCGCCGGCGGAGATTAAGGTTATTCCGGTTGATTCGTTTGTGGCTAATTCGTCGCCGACGCCTCAAAGGTTGATGTCTTCCAATCCGCCGCCTCCACCGCCTCCGCCGTTGCCGGTTACTCAGAGGAAATCGAGACGGACATATCAGACCATCCAGAGAAAGGAGGAAGTTCAAGAGGACAATACGAATGACGCTGAATTCGCGAAGTCGTATACGCCGCCGTCTCCGCCTCCGCTGCCTCCGCGAACGGTTATCCCTCCATCGCCGGTCCGAGTTCGACTGGAGGAGAGATTTGGAAGGAGTGAACGGAAAAACAAATGTTAA

Protein sequence

MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFRPNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDLEFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEINKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQRKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRSERKNKC

Homology

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BLAST of Carg21943 vs. NCBI nr
Match: KAG7021954.1 (hypothetical protein SDJN02_15682, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 600.5 bits (1547), Expect = 8.0e-168
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60
           MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR
Sbjct: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60

Query: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120
           PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL
Sbjct: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120

Query: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180
           EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI
Sbjct: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180

Query: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240
           NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ
Sbjct: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240

Query: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300
           RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS
Sbjct: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300

Query: 301 ERKNKC 307
           ERKNKC
Sbjct: 301 ERKNKC 306

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BLAST of Carg21943 vs. NCBI nr
Match: KAG6588059.1 (hypothetical protein SDJN03_16624, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 589.7 bits (1519), Expect = 1.4e-164
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 0


Query: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60
           MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR
Sbjct: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60

Query: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120
           PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL
Sbjct: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120

Query: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180
           EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI
Sbjct: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180

Query: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240
           NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ
Sbjct: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240

Query: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300
           RKSRRTYQTIQRKEEVQE NTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS
Sbjct: 241 RKSRRTYQTIQRKEEVQEANTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300

Query: 301 ERK 304
           ERK
Sbjct: 301 ERK 303

[Close]

BLAST of Carg21943 vs. NCBI nr
Match: XP_022927291.1 (uncharacterized protein LOC111434169 [Cucurbita moschata])

HSP 1 Score: 579.7 bits (1493), Expect = 1.5e-161
Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 0


Query: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60
           MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR
Sbjct: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60

Query: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120
           PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL
Sbjct: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120

Query: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180
           EFPQQWFGFAERRFS+QSGRTPGTAMRLRRNSSYPDLRQESP ETGNDGNQFRFYDDFEI
Sbjct: 121 EFPQQWFGFAERRFSDQSGRTPGTAMRLRRNSSYPDLRQESPGETGNDGNQFRFYDDFEI 180

Query: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240
           NKFRSRSF YRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRL SSNPPPPPPPPLPVTQ
Sbjct: 181 NKFRSRSFVYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLKSSNPPPPPPPPLPVTQ 240

Query: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300
           RKSRRTYQTIQRKEEVQE NTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS
Sbjct: 241 RKSRRTYQTIQRKEEVQEANTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300

Query: 301 ERK 304
           ERK
Sbjct: 301 ERK 303

[Close]

BLAST of Carg21943 vs. NCBI nr
Match: XP_023530368.1 (wiskott-Aldrich syndrome protein family member 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.5 bits (1469), Expect = 8.9e-159
Identity = 292/303 (96.37%), Postives = 295/303 (97.36%), Query Frame = 0


Query: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60
           MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR
Sbjct: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60

Query: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120
           PNSVKKSWDSFNVFLLLIAIICG+FARRNDDVPTAADVD  RRS RRTVDAAGVKVNGDL
Sbjct: 61  PNSVKKSWDSFNVFLLLIAIICGVFARRNDDVPTAADVDDRRRSGRRTVDAAGVKVNGDL 120

Query: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180
           EFPQQWFGFAERRFS+QSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI
Sbjct: 121 EFPQQWFGFAERRFSDQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180

Query: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240
           NKFRSRSF YRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRL SSNPPPPPPPPLPVTQ
Sbjct: 181 NKFRSRSFVYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLKSSNPPPPPPPPLPVTQ 240

Query: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300
           RKS R YQTIQRKEEVQE NTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFG+S
Sbjct: 241 RKSIRIYQTIQRKEEVQEANTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGKS 300

Query: 301 ERK 304
           ERK
Sbjct: 301 ERK 303

[Close]

BLAST of Carg21943 vs. NCBI nr
Match: XP_023003290.1 (serine/arginine repetitive matrix protein 1-like [Cucurbita maxima])

HSP 1 Score: 568.5 bits (1464), Expect = 3.4e-158
Identity = 292/303 (96.37%), Postives = 295/303 (97.36%), Query Frame = 0


Query: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60
           MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQ+FR
Sbjct: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQIFR 60

Query: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120
           PNSVKKSWDSFNV LLLIAIICGIFARRNDDVPTAADVD SRRSDRRTVDAAGVKVNGDL
Sbjct: 61  PNSVKKSWDSFNVLLLLIAIICGIFARRNDDVPTAADVDDSRRSDRRTVDAAGVKVNGDL 120

Query: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180
           EFPQQWFGFAERRFS+QS RTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI
Sbjct: 121 EFPQQWFGFAERRFSDQSVRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180

Query: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240
           NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSP  QRL SSNPPPPPPPPLPVTQ
Sbjct: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPAHQRLKSSNPPPPPPPPLPVTQ 240

Query: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300
           RKSRRTYQTIQRKEEVQE NTNDAEFAKSYTPP PPPLPPRTVIPPSP+RVRLEERFGRS
Sbjct: 241 RKSRRTYQTIQRKEEVQEANTNDAEFAKSYTPPPPPPLPPRTVIPPSPLRVRLEERFGRS 300

Query: 301 ERK 304
           ERK
Sbjct: 301 ERK 303

[Close]

BLAST of Carg21943 vs. ExPASy TrEMBL
Match: A0A6J1EH96 (uncharacterized protein LOC111434169 OS=Cucurbita moschata OX=3662 GN=LOC111434169 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 7.1e-162
Identity = 298/303 (98.35%), Postives = 299/303 (98.68%), Query Frame = 0


Query: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60
           MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR
Sbjct: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60

Query: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120
           PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL
Sbjct: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120

Query: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180
           EFPQQWFGFAERRFS+QSGRTPGTAMRLRRNSSYPDLRQESP ETGNDGNQFRFYDDFEI
Sbjct: 121 EFPQQWFGFAERRFSDQSGRTPGTAMRLRRNSSYPDLRQESPGETGNDGNQFRFYDDFEI 180

Query: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240
           NKFRSRSF YRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRL SSNPPPPPPPPLPVTQ
Sbjct: 181 NKFRSRSFVYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLKSSNPPPPPPPPLPVTQ 240

Query: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300
           RKSRRTYQTIQRKEEVQE NTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS
Sbjct: 241 RKSRRTYQTIQRKEEVQEANTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300

Query: 301 ERK 304
           ERK
Sbjct: 301 ERK 303

[Close]

BLAST of Carg21943 vs. ExPASy TrEMBL
Match: A0A6J1KRD2 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496940 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.6e-158
Identity = 292/303 (96.37%), Postives = 295/303 (97.36%), Query Frame = 0


Query: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLFR 60
           MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQ+FR
Sbjct: 1   MEPNSDPPPYWSPPTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQIFR 60

Query: 61  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 120
           PNSVKKSWDSFNV LLLIAIICGIFARRNDDVPTAADVD SRRSDRRTVDAAGVKVNGDL
Sbjct: 61  PNSVKKSWDSFNVLLLLIAIICGIFARRNDDVPTAADVDDSRRSDRRTVDAAGVKVNGDL 120

Query: 121 EFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180
           EFPQQWFGFAERRFS+QS RTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI
Sbjct: 121 EFPQQWFGFAERRFSDQSVRTPGTAMRLRRNSSYPDLRQESPWETGNDGNQFRFYDDFEI 180

Query: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRLMSSNPPPPPPPPLPVTQ 240
           NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSP  QRL SSNPPPPPPPPLPVTQ
Sbjct: 181 NKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPAHQRLKSSNPPPPPPPPLPVTQ 240

Query: 241 RKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEERFGRS 300
           RKSRRTYQTIQRKEEVQE NTNDAEFAKSYTPP PPPLPPRTVIPPSP+RVRLEERFGRS
Sbjct: 241 RKSRRTYQTIQRKEEVQEANTNDAEFAKSYTPPPPPPLPPRTVIPPSPLRVRLEERFGRS 300

Query: 301 ERK 304
           ERK
Sbjct: 301 ERK 303

[Close]

BLAST of Carg21943 vs. ExPASy TrEMBL
Match: A0A5A7UIX1 (Ras-associated and pleckstrin-like proteiny domains-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001860 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.8e-118
Identity = 238/308 (77.27%), Postives = 261/308 (84.74%), Query Frame = 0


Query: 1   MEPNSDPPPYWSP-PTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLF 60
           MEPNSDPPP+WSP P + R RS SPPFISLP+LIILLPTLALI+LFFAIRPLLSLT Q++
Sbjct: 1   MEPNSDPPPFWSPSPPIRRPRSYSPPFISLPLLIILLPTLALILLFFAIRPLLSLTNQVY 60

Query: 61  RPNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRT-VDAAGVKVNG 120
           +P SVKKSWDSFNVFL+L+AIICGIFARRNDDVPT AD D SR SD+RT VD  GVKVNG
Sbjct: 61  KPTSVKKSWDSFNVFLVLVAIICGIFARRNDDVPTTADAD-SRGSDQRTVVDTGGVKVNG 120

Query: 121 DLEFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDG-NQFRFYDD 180
           D E  Q+WFGF+ERRFS+  GR P T  RLRRNSSYPDLRQES WE GNDG NQFRF+DD
Sbjct: 121 DSELSQEWFGFSERRFSDPMGRAPVTT-RLRRNSSYPDLRQESLWENGNDGINQFRFFDD 180

Query: 181 FEINKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRL--MSSNPPPPPPPP 240
           FEINK+RSRSF YRTRG+E EESPAEIKVIPVDSFVANSSP P+++   S NPPPPPPPP
Sbjct: 181 FEINKYRSRSFVYRTRGNEREESPAEIKVIPVDSFVANSSPAPEKIKSQSPNPPPPPPPP 240

Query: 241 LPVTQRKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEE 300
           LPVTQRK RRTYQ IQ+KEE+ E   N AEF    TPP PPPLPPR VIPPSPVRVRLEE
Sbjct: 241 LPVTQRKPRRTYQNIQKKEEIPE---NKAEF----TPPPPPPLPPRAVIPPSPVRVRLEE 299

Query: 301 RFGRSERK 304
           +FG+S RK
Sbjct: 301 KFGKSVRK 299

[Close]

BLAST of Carg21943 vs. ExPASy TrEMBL
Match: A0A1S3BRX6 (LOW QUALITY PROTEIN: ras-associated and pleckstrin homology domains-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103492531 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.8e-118
Identity = 238/308 (77.27%), Postives = 261/308 (84.74%), Query Frame = 0


Query: 1   MEPNSDPPPYWSP-PTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLF 60
           MEPNSDPPP+WSP P + R RS SPPFISLP+LIILLPTLALI+LFFAIRPLLSLT Q++
Sbjct: 1   MEPNSDPPPFWSPSPPIRRPRSYSPPFISLPLLIILLPTLALILLFFAIRPLLSLTNQVY 60

Query: 61  RPNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRT-VDAAGVKVNG 120
           +P SVKKSWDSFNVFL+L+AIICGIFARRNDDVPT AD D SR SD+RT VD  GVKVNG
Sbjct: 61  KPTSVKKSWDSFNVFLVLVAIICGIFARRNDDVPTTADAD-SRGSDQRTVVDTGGVKVNG 120

Query: 121 DLEFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGNDG-NQFRFYDD 180
           D E  Q+WFGF+ERRFS+  GR P T  RLRRNSSYPDLRQES WE GNDG NQFRF+DD
Sbjct: 121 DSELSQEWFGFSERRFSDPMGRAPVTT-RLRRNSSYPDLRQESLWENGNDGINQFRFFDD 180

Query: 181 FEINKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRL--MSSNPPPPPPPP 240
           FEINK+RSRSF YRTRG+E EESPAEIKVIPVDSFVANSSP P+++   S NPPPPPPPP
Sbjct: 181 FEINKYRSRSFVYRTRGNEREESPAEIKVIPVDSFVANSSPAPEKIKSQSPNPPPPPPPP 240

Query: 241 LPVTQRKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEE 300
           LPVTQRK RRTYQ IQ+KEE+ E   N AEF    TPP PPPLPPR VIPPSPVRVRLEE
Sbjct: 241 LPVTQRKPRRTYQNIQKKEEIPE---NKAEF----TPPPPPPLPPRAVIPPSPVRVRLEE 299

Query: 301 RFGRSERK 304
           +FG+S RK
Sbjct: 301 KFGKSVRK 299

[Close]

BLAST of Carg21943 vs. ExPASy TrEMBL
Match: A0A0A0LYY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G590250 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 8.8e-112
Identity = 231/308 (75.00%), Postives = 255/308 (82.79%), Query Frame = 0


Query: 1   MEPNSDPPPYWSP-PTMHRRRSSSPPFISLPVLIILLPTLALIILFFAIRPLLSLTPQLF 60
           MEPNSDPPP+W P P +HRRRS SPPFISLPVLIILLPTLALI+LFFAIRPLLSL  Q++
Sbjct: 1   MEPNSDPPPFWPPSPPIHRRRSYSPPFISLPVLIILLPTLALILLFFAIRPLLSLINQVY 60

Query: 61  RPNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRT-VDAAGVKVNG 120
           +P+SVKKSWDSFNVFL+L AIICGIF+RRNDDVPT AD D +R SD+ T VD  GVKVNG
Sbjct: 61  KPSSVKKSWDSFNVFLVLFAIICGIFSRRNDDVPTTADGD-TRGSDQMTVVDTGGVKVNG 120

Query: 121 DLEFPQQWFGFAERRFSEQSGRTPGTAMRLRRNSSYPDLRQESPWETGND-GNQFRFYDD 180
           D E  QQWFGF+ERRFS+ +GR P T  RLRRNSSYPDLRQES W  G+D  NQFRF+DD
Sbjct: 121 DSESSQQWFGFSERRFSDPTGRAPVTT-RLRRNSSYPDLRQESLWGNGDDSNNQFRFFDD 180

Query: 181 FEINKFRSRSFAYRTRGSEIEESPAEIKVIPVDSFVANSSPTPQRL--MSSNPPPPPPPP 240
           FEINKFRSRSF YRTRG+E EESPA    IPVDSFV NSSP P+++   S NPPPPPPPP
Sbjct: 181 FEINKFRSRSFVYRTRGNEREESPA----IPVDSFVVNSSPAPEKMKSQSPNPPPPPPPP 240

Query: 241 LPVTQRKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPPPLPPRTVIPPSPVRVRLEE 300
           LPVTQRK RRTYQ IQ+KEE+ E   N AEF    TPP PPPLPPRTVIPPSPVRVRLEE
Sbjct: 241 LPVTQRKPRRTYQNIQKKEEIPE---NKAEF----TPPPPPPLPPRTVIPPSPVRVRLEE 295

Query: 301 RFGRSERK 304
           +FG+S RK
Sbjct: 301 KFGKSVRK 295

[Close]

BLAST of Carg21943 vs. TAIR 10
Match: AT5G57070.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-35
Identity = 115/321 (35.83%), Postives = 172/321 (53.58%), Query Frame = 0


Query: 4   NSDPPPYWS--PPTMHRRRSSSPPFISLPVLI-ILLPTLALIILFFAIRPLLSLTPQLFR 63
           +  PP  W     T + RR SS P I +P +I +    + L+ + F +   LS+T Q+ +
Sbjct: 2   DDQPPLIWPQFDSTGYARRRSSIPAILVPAMIGVTSAAIFLVFVTFVVPTFLSVTSQILQ 61

Query: 64  PNSVKKSWDSFNVFLLLIAIICGIFARRNDDVPTAADVDGSRRSDRRTVDAAGVKVNGDL 123
           P SVK+ WDS NV L++ AI+CG+ ARRNDD  ++  + G    +       G   NG++
Sbjct: 62  PASVKRGWDSINVVLVVFAILCGVLARRNDDGLSSESLHGGEEEE----VGGGAVTNGEM 121

Query: 124 -------------EFPQQWF-------------GFAERRFSEQSGRTPGTAMRLRRNSSY 183
                           +QWF               + R FS     T    +R R +SSY
Sbjct: 122 TVGEISKISSSSSTVSEQWFDDVYDSDRLKIYESVSSRSFSHGLPVTGNVPLR-RSSSSY 181

Query: 184 PDLRQESPWETGNDGNQFRFYDDFEINKFRSR-SFAYR----TRGSEIEESPAEIKVIPV 243
           PDLRQ    ETG+   +FRFYDDFEI+K+RS+ S +Y+       +EIEE  +E K I +
Sbjct: 182 PDLRQGVFRETGD--RRFRFYDDFEIDKYRSQDSSSYQQFQNLSKTEIEEEESEPKEIQI 241

Query: 244 DSFVANSSPTPQRLMSSNPPPPPPPPLPVTQRKSRRTYQTIQRKEEVQEDNTNDAEFAKS 290
           D+FV   S  PQ+  ++ PPPPPPPP+ V Q K RRT+++++ ++  +    ++ +F ++
Sbjct: 242 DTFVVKPSSPPQQPPATPPPPPPPPPVEVPQ-KPRRTHRSVRNRDLQENAKRSETKFKRT 301

[Close]

BLAST of Carg21943 vs. TAIR 10
Match: AT1G72790.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-10
Identity = 77/282 (27.30%), Postives = 120/282 (42.55%), Query Frame = 0


Query: 33  IILLPTLALIILFFAIRPLLSLTPQLFRPNSVKKSWDSFNVFLLLIAIICGIFAR--RND 92
           I    T A++I+ F I P  S   Q+FRP+ V+KSWD  N  L+L A++CG  +R   ND
Sbjct: 40  IFFAGTAAILIVVFIIPPFFSSVSQIFRPHLVRKSWDYLNFVLVLFAVLCGFLSRNTNND 99

Query: 93  DVPTAADVD-GSRRSDRRTVDAAGVKVNGDLEFPQQWFGFAERRFSEQSGRTPGTAMRLR 152
           +     + D  ++ S   ++     +V+     P+ W    +R              RLR
Sbjct: 100 ESNHHKEEDIRNKFSTSPSIIDRRSRVSNSGTTPRYWND--DRGGGGGDQTVYKRFSRLR 159

Query: 153 RNSSYPDLRQESPWETGNDGNQFRFYDDFEINKFRSRSF-------AYRT---------- 212
             SSYPDLR    +E      ++RFYDD  +++ R           +YR           
Sbjct: 160 SVSSYPDLRLRE-YEA---DERWRFYDDTRVSQCRYEDVDPIYPNQSYRNWHEEGKPPPE 219

Query: 213 -----------RGSEIEESPAEIKVIPV----DSFVANSSPTPQR---LMSSNPPPPPPP 272
                       GS++    +E + + V    ++ V      P     + S  P PP PP
Sbjct: 220 DVDQTEDGDNGEGSKVRNGGSETEKVEVVATAEAEVVEELKVPSAPPYIPSPPPSPPRPP 279

Query: 273 PLPVTQRKSRRTYQTIQRKEEVQEDNTNDAEFAKSYTPPSPP 277
           P    +RK+ R YQ +  +EE +E +    +F  + TP  PP
Sbjct: 280 PAKQAKRKTNRVYQDVSPQEEKKERD----DFVATTTPIPPP 311

The following BLAST results are available for this feature:

BLAST of Carg21943 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021954.1	8.0e-168	100.00	hypothetical protein SDJN02_15682, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6588059.1	1.4e-164	99.67	hypothetical protein SDJN03_16624, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927291.1	1.5e-161	98.35	uncharacterized protein LOC111434169 [Cucurbita moschata]	[more]
XP_023530368.1	8.9e-159	96.37	wiskott-Aldrich syndrome protein family member 2 [Cucurbita pepo subsp. pepo]	[more]
XP_023003290.1	3.4e-158	96.37	serine/arginine repetitive matrix protein 1-like [Cucurbita maxima]	[more]

BLAST of Carg21943 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21943 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EH96	7.1e-162	98.35	uncharacterized protein LOC111434169 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]
A0A6J1KRD2	1.6e-158	96.37	serine/arginine repetitive matrix protein 1-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5A7UIX1	4.8e-118	77.27	Ras-associated and pleckstrin-like proteiny domains-containing protein 1 OS=Cucu...	[more]
A0A1S3BRX6	4.8e-118	77.27	LOW QUALITY PROTEIN: ras-associated and pleckstrin homology domains-containing p...	[more]
A0A0A0LYY7	8.8e-112	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G590250 PE=4 SV=1	[more]

BLAST of Carg21943 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57070.1	2.3e-35	35.83	hydroxyproline-rich glycoprotein family protein	[more]
AT1G72790.1	1.5e-10	27.30	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..306
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 1..303
None	No IPR available	PANTHER	PTHR33098:SF71	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 1..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21943-RA	Carg21943-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane