Carg21605 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21605
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	auxin-responsive protein SAUR36-like
Location	Carg_Chr06: 4036324 .. 4036782 (+)
RNA-Seq Expression	Carg21605
Synteny	Carg21605

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAAGAACCAGAGGTTTCAAATTGAAAATCAAGCTCCTCAAGATCTTCAAATCCACACCCAATTTCAACTTCAATCTTCCCCCATCCTCCAATCCCTTCTCCAACCTCTTCTCCCTCGCCACCGCTTCCTTTTCTCGCCGCCTCGGCTACGGCCGCTTGGAACGCCGTCGCTCCCCTCCGCCTCCACCGCCCAAAGGGTATCTCGCCGTGCACGTCGGCGGACCCGAGGATCAAACGGAGACCCATCTTGTCCCCGTCATTTACTTCAACCATCCCATGTTTGGGAAATTGCTGCAGGCGGCCGAGAGGATTTATGGGTTTGATTATCCTGGTCGGATCGTCATTCCGGTTGGCGTCTCGGAGTTTGAGGAGGTTAGGAATTGCATTGCTGCGGCCGACCACAGTCGATCCAGGCGGCGGAGTGGCGGCTGCCGGCGCCGGCTCTGGGGAAAGTAG

mRNA sequence

ATGCGAAGAACCAGAGGTTTCAAATTGAAAATCAAGCTCCTCAAGATCTTCAAATCCACACCCAATTTCAACTTCAATCTTCCCCCATCCTCCAATCCCTTCTCCAACCTCTTCTCCCTCGCCACCGCTTCCTTTTCTCGCCGCCTCGGCTACGGCCGCTTGGAACGCCGTCGCTCCCCTCCGCCTCCACCGCCCAAAGGGTATCTCGCCGTGCACGTCGGCGGACCCGAGGATCAAACGGAGACCCATCTTGTCCCCGTCATTTACTTCAACCATCCCATGTTTGGGAAATTGCTGCAGGCGGCCGAGAGGATTTATGGGTTTGATTATCCTGGTCGGATCGTCATTCCGGTTGGCGTCTCGGAGTTTGAGGAGGTTAGGAATTGCATTGCTGCGGCCGACCACAGTCGATCCAGGCGGCGGAGTGGCGGCTGCCGGCGCCGGCTCTGGGGAAAGTAG

Coding sequence (CDS)

ATGCGAAGAACCAGAGGTTTCAAATTGAAAATCAAGCTCCTCAAGATCTTCAAATCCACACCCAATTTCAACTTCAATCTTCCCCCATCCTCCAATCCCTTCTCCAACCTCTTCTCCCTCGCCACCGCTTCCTTTTCTCGCCGCCTCGGCTACGGCCGCTTGGAACGCCGTCGCTCCCCTCCGCCTCCACCGCCCAAAGGGTATCTCGCCGTGCACGTCGGCGGACCCGAGGATCAAACGGAGACCCATCTTGTCCCCGTCATTTACTTCAACCATCCCATGTTTGGGAAATTGCTGCAGGCGGCCGAGAGGATTTATGGGTTTGATTATCCTGGTCGGATCGTCATTCCGGTTGGCGTCTCGGAGTTTGAGGAGGTTAGGAATTGCATTGCTGCGGCCGACCACAGTCGATCCAGGCGGCGGAGTGGCGGCTGCCGGCGCCGGCTCTGGGGAAAGTAG

Protein sequence

MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGVSEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK

Homology

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BLAST of Carg21605 vs. NCBI nr
Match: KAG6596841.1 (Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028368.1 Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.9 bits (803), Expect = 7.5e-82
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60
           MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP
Sbjct: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60

Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV
Sbjct: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120

Query: 121 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK
Sbjct: 121 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 152

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BLAST of Carg21605 vs. NCBI nr
Match: XP_022946182.1 (auxin-responsive protein SAUR36-like [Cucurbita moschata])

HSP 1 Score: 310.8 bits (795), Expect = 6.3e-81
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60
           MRR RGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP
Sbjct: 1   MRRVRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60

Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV
Sbjct: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120

Query: 121 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEVRNCIAAADHSRSRRR+GGCRRRLWGK
Sbjct: 121 SEFEEVRNCIAAADHSRSRRRTGGCRRRLWGK 152

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BLAST of Carg21605 vs. NCBI nr
Match: XP_023540788.1 (auxin-responsive protein SAUR36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 1.8e-80
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60
           MRRTRGFKLKIKLL IFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP
Sbjct: 1   MRRTRGFKLKIKLLNIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60

Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV
Sbjct: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120

Query: 121 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEVRNCIAAA+HSRSRRR+GGCRRRLWGK
Sbjct: 121 SEFEEVRNCIAAAEHSRSRRRTGGCRRRLWGK 152

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BLAST of Carg21605 vs. NCBI nr
Match: XP_023005960.1 (auxin-induced protein 15A-like [Cucurbita maxima])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 137/152 (90.13%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60
           MR TRGFKLKIKLLKI        FNLPPSSN FSNLFSLATASFSRRLGYGRLERRRSP
Sbjct: 1   MRTTRGFKLKIKLLKI--------FNLPPSSNLFSNLFSLATASFSRRLGYGRLERRRSP 60

Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           PPPPPKGYL+VHVGGPEDQTE+HLVPVIYFNHP+FGKLLQAAERIYGFDYPGRIVIPVGV
Sbjct: 61  PPPPPKGYLSVHVGGPEDQTESHLVPVIYFNHPLFGKLLQAAERIYGFDYPGRIVIPVGV 120

Query: 121 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEVRNCIAAA+HSRSRRRSGGCR RLWGK
Sbjct: 121 SEFEEVRNCIAAAEHSRSRRRSGGCRHRLWGK 144

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BLAST of Carg21605 vs. NCBI nr
Match: XP_008448892.1 (PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 4.7e-52
Identity = 117/152 (76.97%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSPP 61
           RRT+GFKLKIKLLKIFK   +F FNL   SNPFS LFSLATA FSRR+GY RL R RS P
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHF-FNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTP 62

Query: 62  P-PPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 121
               PKGYLAVHVGGPED+TE HLVPVIYFNHPMF KLLQAAE IYGFDYPGRIVIPV V
Sbjct: 63  AVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDV 122

Query: 122 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEV+N IAAA++ R  RRSGG RRR  GK
Sbjct: 123 SEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

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BLAST of Carg21605 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.2e-15
Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 46  SRRLGYGRLERRRSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERI 105
           +RR  Y  ++ +++   P P+G+LA++VG  +      LVP++YFNHP+FG+LL+ AE+ 
Sbjct: 63  TRRSAYIPVDHKKA--DPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKE 122

Query: 106 YGFDYPGRIVIPVGVSEFEEVRNCIAAADHSR 138
           YGF + G I IP   S+FE V+  IA+   SR
Sbjct: 123 YGFCHEGGITIPCLYSDFERVKTRIASGSSSR 152

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BLAST of Carg21605 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.5e-12
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 65  PKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGVSEFE 124
           PKG LA+ VG   ++ +  +VPV+YFNHP+F +LL+ AE  YGFD  G I IP  V EF 
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFR 84

Query: 125 EVRNCI 131
            V+  I
Sbjct: 85  YVQALI 90

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BLAST of Carg21605 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 31/83 (37.35%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 49  LGYGRLERRRSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGF 108
           LG  ++ RR S     P+G++AV+VG  + + + ++VPV Y N P+F +LL  +E  +G+
Sbjct: 8   LGAKQIIRRES--SSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGY 67

Query: 109 DYP-GRIVIPVGVSEFEEVRNCI 131
           D+P G + IP   S F  V + I
Sbjct: 68  DHPMGGLTIPCHESLFFTVTSQI 88

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BLAST of Carg21605 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.7e-05
Identity = 24/70 (34.29%), Postives = 37/70 (52.86%), Query Frame = 0


Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           P   PKG+  V+VG   +    ++VP+ +  HP F  LLQ AE  +GFD+   + IP   
Sbjct: 40  PLDVPKGHFPVYVG---ENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDE 99

Query: 121 SEFEEVRNCI 131
             F+ + + I
Sbjct: 100 LVFQTLTSMI 106

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BLAST of Carg21605 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.9e-04
Identity = 24/71 (33.80%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           P   PKG+  V+VG   ++   ++VP+   +HP F  LLQ +E  +GF++   I+IP   
Sbjct: 36  PNDVPKGHFVVYVG---ERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQE 95

Query: 121 SEFEEVRNCIA 132
            +F    + IA
Sbjct: 96  VDFLSFFSMIA 103

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BLAST of Carg21605 vs. ExPASy TrEMBL
Match: A0A6J1G318 (auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC111450339 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.1e-81
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60
           MRR RGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP
Sbjct: 1   MRRVRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60

Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV
Sbjct: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120

Query: 121 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEVRNCIAAADHSRSRRR+GGCRRRLWGK
Sbjct: 121 SEFEEVRNCIAAADHSRSRRRTGGCRRRLWGK 152

[Close]

BLAST of Carg21605 vs. ExPASy TrEMBL
Match: A0A6J1KYV6 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111498817 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.4e-71
Identity = 137/152 (90.13%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSP 60
           MR TRGFKLKIKLLKI        FNLPPSSN FSNLFSLATASFSRRLGYGRLERRRSP
Sbjct: 1   MRTTRGFKLKIKLLKI--------FNLPPSSNLFSNLFSLATASFSRRLGYGRLERRRSP 60

Query: 61  PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 120
           PPPPPKGYL+VHVGGPEDQTE+HLVPVIYFNHP+FGKLLQAAERIYGFDYPGRIVIPVGV
Sbjct: 61  PPPPPKGYLSVHVGGPEDQTESHLVPVIYFNHPLFGKLLQAAERIYGFDYPGRIVIPVGV 120

Query: 121 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEVRNCIAAA+HSRSRRRSGGCR RLWGK
Sbjct: 121 SEFEEVRNCIAAAEHSRSRRRSGGCRHRLWGK 144

[Close]

BLAST of Carg21605 vs. ExPASy TrEMBL
Match: A0A1S3BLN7 (auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 117/152 (76.97%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSPP 61
           RRT+GFKLKIKLLKIFK   +F FNL   SNPFS LFSLATA FSRR+GY RL R RS P
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHF-FNLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTP 62

Query: 62  P-PPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 121
               PKGYLAVHVGGPED+TE HLVPVIYFNHPMF KLLQAAE IYGFDYPGRIVIPV V
Sbjct: 63  AVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDV 122

Query: 122 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEV+N IAAA++ R  RRSGG RRR  GK
Sbjct: 123 SEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of Carg21605 vs. ExPASy TrEMBL
Match: A0A5D3D7D7 (Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001430 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 8.7e-52
Identity = 116/152 (76.32%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSPP 61
           RRT+GFKLKIKLLKIFK   +F F+L   SNPFS LFSLATA FSRR+GY RL R RS P
Sbjct: 3   RRTKGFKLKIKLLKIFKWRTHF-FDLHTYSNPFSKLFSLATAPFSRRVGYARLNRVRSTP 62

Query: 62  P-PPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 121
               PKGYLAVHVGGPED+TE HLVPVIYFNHPMF KLLQAAE IYGFDYPGRIVIPV V
Sbjct: 63  AVATPKGYLAVHVGGPEDETERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDV 122

Query: 122 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEV+N IAAA++ R  RRSGG RRR  GK
Sbjct: 123 SEFEEVKNGIAAAENGRYCRRSGGYRRRRCGK 153

[Close]

BLAST of Carg21605 vs. ExPASy TrEMBL
Match: A0A0A0L5M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45
Identity = 106/152 (69.74%), Postives = 115/152 (75.66%), Query Frame = 0


Query: 2   RRTRGFKLKIKLLKIFKSTPNFNFNLPPSSNPFSNLFSLATASFSRRLGYGRLERRRSPP 61
           R T+GFKLK+KLLK+FK    F FNL   SNPFS LFSLAT  FSR + Y RL R RS P
Sbjct: 3   RTTKGFKLKLKLLKVFKWRTPF-FNLHTYSNPFSKLFSLATDPFSRPVRYARLNRVRSTP 62

Query: 62  P-PPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGV 121
           P   PKGYLAVHVGGPE++ E HLVPVIYFNHPMF KLLQAAE IYGFDYPGRIVIPV V
Sbjct: 63  PVATPKGYLAVHVGGPENERERHLVPVIYFNHPMFRKLLQAAEVIYGFDYPGRIVIPVDV 122

Query: 122 SEFEEVRNCIAAADHSRSRRRSGGCRRRLWGK 153
           SEFEEV+N IAA ++ R   R GG RR   GK
Sbjct: 123 SEFEEVKNGIAATENGRCCPRRGGYRRWRCGK 153

[Close]

BLAST of Carg21605 vs. TAIR 10
Match: AT4G12410.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFNLPPS--SNPFSNLFSLA--TASFSRRL------- 60
           M+R RGFK+  + +KIFK  P    N  P+  +NP + + SLA   +  ++RL       
Sbjct: 1   MKRVRGFKIGHRFVKIFKWIPR---NRCPTRITNPVTGIRSLARCLSRGAKRLCGGSKKN 60

Query: 61  -GYGRLERRRSPPPP---PPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERI 120
            G  ++   + P       P+G+L VHVG  +D T   +VPVIYFNHP+FG+LL+ AER+
Sbjct: 61  PGQNQIRLGKDPKKSNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGELLEQAERV 120

Query: 121 YGFDYPGRIVIPVGVSEFEEVRNCIAAADHSRSR 140
           +GFD PGRI IP  VS+FE+V+  IAA DH R +
Sbjct: 121 HGFDQPGRITIPCRVSDFEKVQLRIAAWDHCRRK 151

[Close]

BLAST of Carg21605 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 67/156 (42.95%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 1   MRRTRGFKLKIKLLKIFKSTPNFNFN-------LPPSSNPFSNLFSLATASFSRRLGYGR 60
           M+R RGFK+  + +KIFK       N       L    NP + ++SLA     R  G  R
Sbjct: 1   MKRLRGFKIGHRFVKIFKWIIRSRRNQTGKRQCLTGILNPVTKIYSLARRCLRR--GANR 60

Query: 61  LERRRSP----------PPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAE 120
           L     P           P  P+G+L VHVG   + T   +VPVIYFNHP+FG+LL+ AE
Sbjct: 61  LCGGMKPGQTRLGNEPKTPTVPRGHLVVHVGESGEDTRRVVVPVIYFNHPLFGELLEQAE 120

Query: 121 RIYGFDYPGRIVIPVGVSEFEEVRNCIAAADHSRSR 140
           R+YGF+ PGRI+IP  VS+FE+V+  IAA DH R +
Sbjct: 121 RVYGFEQPGRIMIPCRVSDFEKVQMRIAAWDHCRRK 154

[Close]

BLAST of Carg21605 vs. TAIR 10
Match: AT2G45210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 46  SRRLGYGRLERRRSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERI 105
           +RR  Y  ++ +++   P P+G+LA++VG  +      LVP++YFNHP+FG+LL+ AE+ 
Sbjct: 63  TRRSAYIPVDHKKA--DPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKE 122

Query: 106 YGFDYPGRIVIPVGVSEFEEVRNCIAAADHSR 138
           YGF + G I IP   S+FE V+  IA+   SR
Sbjct: 123 YGFCHEGGITIPCLYSDFERVKTRIASGSSSR 152

[Close]

BLAST of Carg21605 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 58  RSPPPPPPKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIP 117
           R  P P PKG+ AV++G  +   +  LVP++YFNHP+FG+LL+ AE  +GF   G I IP
Sbjct: 82  REKPDPVPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIP 141

Query: 118 VGVSEFEEVRNCI 131
              S+F+ V+  I
Sbjct: 142 CPYSDFKRVQTRI 154

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BLAST of Carg21605 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-13
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 65  PKGYLAVHVGGPEDQTETHLVPVIYFNHPMFGKLLQAAERIYGFDYPGRIVIPVGVSEFE 124
           PKG LA+ VG   ++ +  +VPV+YFNHP+F +LL+ AE  YGFD  G I IP  V EF 
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFR 84

Query: 125 EVRNCI 131
            V+  I
Sbjct: 85  YVQALI 90

The following BLAST results are available for this feature:

BLAST of Carg21605 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596841.1	7.5e-82	100.00	Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022946182.1	6.3e-81	98.68	auxin-responsive protein SAUR36-like [Cucurbita moschata]	[more]
XP_023540788.1	1.8e-80	98.03	auxin-responsive protein SAUR36-like [Cucurbita pepo subsp. pepo]	[more]
XP_023005960.1	1.7e-70	90.13	auxin-induced protein 15A-like [Cucurbita maxima]	[more]
XP_008448892.1	4.7e-52	76.97	PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo]	[more]

BLAST of Carg21605 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22150	8.2e-15	42.39	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
Q9ZUZ3	8.5e-12	50.00	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
Q41220	2.2e-07	37.35	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
O65695	7.7e-05	34.29	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	2.9e-04	33.80	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]

BLAST of Carg21605 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G318	3.1e-81	98.68	auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1KYV6	8.4e-71	90.13	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111498817 PE=3 ...	[more]
A0A1S3BLN7	2.3e-52	76.97	auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=...	[more]
A0A5D3D7D7	8.7e-52	76.32	Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0L5M2	1.6e-45	69.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1	[more]

BLAST of Carg21605 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12410.1	1.2e-24	43.51	SAUR-like auxin-responsive protein family	[more]
AT4G22620.1	3.4e-24	42.95	SAUR-like auxin-responsive protein family	[more]
AT2G45210.1	5.8e-16	42.39	SAUR-like auxin-responsive protein family	[more]
AT3G60690.1	1.2e-13	45.21	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	6.0e-13	50.00	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 57..128 e-value: 2.8E-13 score: 49.9
None	No IPR available	PANTHER	PTHR31374:SF210	AUXIN-RESPONSIVE PROTEIN-LIKE	coord: 47..140
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 47..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21605-RA	Carg21605-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin