Carg21596 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTCTTCACTTCCATACTCCTTTTCTCTCTCATCCATCACTGTCACCTTTTTCCTCTCTTCCAGTATATATTTCTCTTGCAGTTCCTCCTACAAAGCGCACATACACATACACAGATTTCGGTTCTTCAGGCTTCTGAGACCACAGCAATGTCGGCCATTAAGGACGAAGATCCTCGCATCAATGGAATCCGAACGAACATCCGCGTCGTTCCCGATTTTCCGAAGCCAGGTTTAATTTCTTCTACTTTTTGTTTGTTTTTCCTCTTCTTCTCTCGATTTTTGAGGTTTTTGATCAGCTATTTATTACCGATTTAGGTATCATGTTCCAGGATATTACTACTCTGTTGCTTGAACCGAAGGTCTTCAAGGATGCGATTGACATGTTCGTGGAGCGATACAAGGGGAAAAATATCACCGTCGTTGCAGGTAACGAAAATAAACACAGATTCTCTCTTCCTACTCGTTTTTGCTGCAATTTCTTTTCGCGATTAGGAGTTTTGGATTTAGAAGCGGTGTTCGTCATAATCCGTGCCGATTGTTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTCGTATTTGAACGGTTGAGGAGGAATCGAGTGGAAATCGTGATTCTGTCAGTGTGTGTGTGAGATCCGATTTGCATGGATATGATTGTGGCCCCTTGATGGAGGTCTGGATAGGGCCGCCAGTGCCTTGTTCTGTTCGTCGCGACTACAAATGTGGATTTCTACGCCTTGCGATTCTATGCCTCGTCTATTTCTCTTTGTTTGTCATCTTCTTTGAATTGCTAGTTGTGTCCAATGATGAAGATGTTGATTTTGTGAACGATTTTGCATTTTCTCTCCATTGCAACGATGGAATTTAATTGAGATATATTCAAATTTGAAAAGCTAATAAAAAGAATTTTAAAATAATAATAAATAAACAAACAAAACAGAAAAAGCTGCAATAAATTTTTTCTTTTCTTTTCTTTTTTTTTATATTTTTTAAGTTTTCTATTAGATTAACTCTTTTAAAAGTTTTCCTTTCCTATTGTTTTTAAATCTATAAAAATTGTTTGGATGCATTCTTTTTGTTACTGTGAAATCAATTATTTTCTTACCTGTTTATTTAAAATTAATAATTGCTGCACATTTAATTGAGAAAATATCACCTAACAAAATTGACAAATTCTTTTTTCAATATGGGAACTTGTTTGTTTTGTTTATGGACATATTATGGAATGGGCCTAGAATCAGGTTATTATTTACATATGCAAACTCTAATTTTGTATTGTTTTTTTTTTTTTCATATGGGATTTTATATGATCTTGAAAATGAATTTATCACGATTTAAAATTTTAATTTTAAGAAATAAAAATAATTAGTTTCCATTTTTCAGTGACTTCAAGCTTTTAACATTATCACACTTATTTCTCCAACATGTTACCAAAATGATTGAAATCAACTTCTCCTTTATCATTTATCACCATCGCTTCAATGTTCTTACATTTTCATGCTATTCCAGTTTTTCCATTAATATCTCAGACAAAGCTTGTGTATTATTAACATAATTGGCTCGTTGGTCTTTTTCTTCAGCTTTTATCATTAGTTCTTCTCTCTCTCTCTCTCTCTCTCAAGATGTTGAAAATATAGACTTACCTAATTAAAAACAACCACAAACTTTTCAATTTAGTTCCATTATTTCCCCCATCATAATACATGAACATTGCATCTGTTCAACAAAGCTGTTGAATAATAGTGATCCATTATAAGAATCAAGTTCATATTTATTAAAGCCGAAGCAAGTTCGTTATGTGGCTATCTTCCTTTCTTCCCCACCCTTATTATTTCCACTTCACCAACCACAGGACCATATTTCTTTTCATGGGTTATTAGGATTTCCACTTCCTCTTCTGGTCCAAAGTGGTTGAGTTTTTTAATATTTGATATAGTTAAAGTTCTTATTTACTCAGCTTGGTGATTTTAAATGGCACTGAATGTGAAGACGTGTGTGTGTGTACGGACACCTATAGTTTTGTTTCCTCTTAAGTTAATATAAGTGTTTGATATAATTCAATACATCATAACCCATAAATTTAAACGACCAAAATTTTAACTCACCACAACTTTTGAAGTGAAAAGGTCGAGATCTTTAGTTTTTCTTGTGTTTCACTTGTGTGTTAATTGACTTGAGTTTGTGTTAAAAAAATTAGGCTGCTCTTGGCTGTAATCATGTGGAATCTGGTTTTAGCATATGTATTGAATTACCTAGTCTTGAATCTACTTAGAATGCTGGAGTCTTAAATGGGATATGACTGTTCTATAGTTGAAGTCAAGGTTGATGTATGATTTTGATTGAACAGCTTATTTTGTTGACTAAGAACTATAGGTAAGATTTAATCAAAATATCGGCATGGTCCTGTAATAAAAGAAGACTTGAAAGTCAAAATAATTGTTTTCTTCCCTTTTTTGTCCGATGTGTGTTGTTTTTTTTTTTTTTTTTTTTTTTTCTTAAATAGTGTACTCAGTCAAGCTTTTCTTTCACATCGATGGTGATGGGAATCTGTTTGATTTACATTTGCAGGAATTGAAGCGCGTGGGTTTATTTTTGGTCCTCCAATTGCGTTGGCTATCGGAGCAAAGTTTGTGCCTCTGAGAAAACCAAAGAAATTGCCTGGTATTGCCTTCAGTTCTTTAAAATTAATGTTAAAAAACACATCACAAGAAACAACAACATTACCGAACAATTTTGTGTGATCAATTGAGCTGCATGTCATCTAAATCTCAGACACTCCATTTCCAAGAAGCAAAACGAAAGATTACAACCCAAGTGGAAGATCACATTGGTTGCCTTTCTGACTTAGTAGAGGCAGATCATGTGAAATAATGTAAGATATATTTGCAGGTGGAGTTATGTCCGAAGCGTACATCTTGGAATATGGAAGGGATTGCCTAGAAATGCATGTTGGTGCTGTCGAGGCCAACGAACGTGCCTTGGTTGTTGATGACTTGGTTGCCACTGGTGGCACTCTCTGTGCAGCCATCAATTTACTTGGTATTTTTCTCCAACCCCTTCACTTTGTTCGCCTACTTTGTCCTTTTAAATCATGTTCTTGCCTTAAAATTATGGATCCCATTTCTAGCATGGTATGTTTTTCTTGATAGATGTCAATTCGTGCCACCATTATTAGAGACATGCAACAAATGGAGCCAAATGGAGTATAAATCCATTTGGAACATTGCACACTATAATAAAAGTTATAGGTAGTGGGCCATTGGCCATACGTTAGTAATCACGACTCTCTACTATAGTATGATATTGTCCACTTTGAGTATAAGCTCTTATGGCTTTGATTTTGGTTTCCCCAAAAAGACTTGTATCAATGGAGATGTATTCCTTACTTATAAAATCATGATCATTTTCTAAATTAGACAATATAGACGCTCTCCTAACAATTCTCAACATCATAGTTTAGCGGGACGGAGTTCCATTGAAATTAATATTTAGTGTTATGTTTTTAGAATGCATTATGTTGTGCTTTAAAATCAAAATTAGTTAGTGAATTTCCGTTTACATAACTGATTGACTAAGAAATAAGAAAAAGAAGCTGATAACCAATATTTTGGTTCGTAGAACGAGCTGGAGCAGAAGTGGTTGAATGTGCATGCGTGATTGAAATACCAGAATTAAAGGTAAGAATATTCTTCTACAATCGCCATTAAAATTCGTTTCATTCACATTAAAAAAATTCATATATTGCCATATATACCGTTTACATTTGGAGTGAACTTTTCCAAAGTTATTTTGAATCTTTTGTATCAAAAAATTATATGATTTTTTCCATCTTGCACTCACCTAAATTCAATCTGACTATGTTATGTGTATTATGCCGGTAATGAAATTCAAATAATTATATCCATATTTTAAATTTCCATATAAATATATGTTTAGATATGTTTATAAATATATTTTGTTACAATATATGTTTTTTTATTTTTTTTAAGAAAAAAGAAGCATGAAATATAAGAACCTGGAAACCCTAAGAGTAAAAAGGGACACGAACTTTTTTGCAGGGTCGAGAGAGACTAAAAGGGAAACCACTGTACACTTTAGTGGAGTACCGATGAATGCGGCGGCGTCAGATGGTTGAATCGCTGCCGATGACGACCCAAAAACAAGTGTG TCTCTCTCTTCACTTCCATACTCCTTTTCTCTCTCATCCATCACTGTCACCTTTTTCCTCTCTTCCAGTATATATTTCTCTTGCAGTTCCTCCTACAAAGCGCACATACACATACACAGATTTCGGTTCTTCAGGCTTCTGAGACCACAGCAATGTCGGCCATTAAGGACGAAGATCCTCGCATCAATGGAATCCGAACGAACATCCGCGTCGTTCCCGATTTTCCGAAGCCAGGTATCATGTTCCAGGATATTACTACTCTGTTGCTTGAACCGAAGGTCTTCAAGGATGCGATTGACATGTTCGTGGAGCGATACAAGGGGAAAAATATCACCGTCGTTGCAGGAATTGAAGCGCGTGGGTTTATTTTTGGTCCTCCAATTGCGTTGGCTATCGGAGCAAAGTTTGTGCCTCTGAGAAAACCAAAGAAATTGCCTGGTGGAGTTATGTCCGAAGCGTACATCTTGGAATATGGAAGGGATTGCCTAGAAATGCATGTTGGTGCTGTCGAGGCCAACGAACGTGCCTTGGTTGTTGATGACTTGGTTGCCACTGGTGGCACTCTCTGTGCAGCCATCAATTTACTTGAACGAGCTGGAGCAGAAGTGGTTGAATGTGCATGCGTGATTGAAATACCAGAATTAAAGGGTCGAGAGAGACTAAAAGGGAAACCACTGTACACTTTAGTGGAGTACCGATGAATGCGGCGGCGTCAGATGGTTGAATCGCTGCCGATGACGACCCAAAAACAAGTGTG ATGTCGGCCATTAAGGACGAAGATCCTCGCATCAATGGAATCCGAACGAACATCCGCGTCGTTCCCGATTTTCCGAAGCCAGGTATCATGTTCCAGGATATTACTACTCTGTTGCTTGAACCGAAGGTCTTCAAGGATGCGATTGACATGTTCGTGGAGCGATACAAGGGGAAAAATATCACCGTCGTTGCAGGAATTGAAGCGCGTGGGTTTATTTTTGGTCCTCCAATTGCGTTGGCTATCGGAGCAAAGTTTGTGCCTCTGAGAAAACCAAAGAAATTGCCTGGTGGAGTTATGTCCGAAGCGTACATCTTGGAATATGGAAGGGATTGCCTAGAAATGCATGTTGGTGCTGTCGAGGCCAACGAACGTGCCTTGGTTGTTGATGACTTGGTTGCCACTGGTGGCACTCTCTGTGCAGCCATCAATTTACTTGAACGAGCTGGAGCAGAAGTGGTTGAATGTGCATGCGTGATTGAAATACCAGAATTAAAGGGTCGAGAGAGACTAAAAGGGAAACCACTGTACACTTTAGTGGAGTACCGATGA MSAIKDEDPRINGIRTNIRVVPDFPKPGIMFQDITTLLLEPKVFKDAIDMFVERYKGKNITVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGGVMSEAYILEYGRDCLEMHVGAVEANERALVVDDLVATGGTLCAAINLLERAGAEVVECACVIEIPELKGRERLKGKPLYTLVEYR Homology
BLAST of Carg21596 vs. NCBI nr
Match: XP_022942938.1 (adenine phosphoribosyltransferase 3-like [Cucurbita moschata] >XP_023005570.1 adenine phosphoribosyltransferase 3-like [Cucurbita maxima] >XP_023539208.1 adenine phosphoribosyltransferase 3-like [Cucurbita pepo subsp. pepo] >KAG6596847.1 Adenine phosphoribosyltransferase 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028377.1 Adenine phosphoribosyltransferase 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 363.2 bits (931), Expect = 1.3e-96 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg21596 vs. NCBI nr
Match: XP_022923284.1 (adenine phosphoribosyltransferase 3-like [Cucurbita moschata]) HSP 1 Score: 338.2 bits (866), Expect = 4.4e-89 Identity = 164/182 (90.11%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg21596 vs. NCBI nr
Match: XP_023552043.1 (adenine phosphoribosyltransferase 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 337.8 bits (865), Expect = 5.8e-89 Identity = 163/182 (89.56%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg21596 vs. NCBI nr
Match: XP_022965193.1 (adenine phosphoribosyltransferase 3-like [Cucurbita maxima]) HSP 1 Score: 337.8 bits (865), Expect = 5.8e-89 Identity = 164/182 (90.11%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg21596 vs. NCBI nr
Match: KAG6577615.1 (Adenine phosphoribosyltransferase 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG6577620.1 Adenine phosphoribosyltransferase 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015662.1 Adenine phosphoribosyltransferase 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 337.0 bits (863), Expect = 9.9e-89 Identity = 163/182 (89.56%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy Swiss-Prot
Match: Q9SUW2 (Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=APT3 PE=1 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 3.9e-80 Identity = 146/178 (82.02%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy Swiss-Prot
Match: Q9SU38 (Adenine phosphoribosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=APT4 PE=1 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.4e-77 Identity = 143/182 (78.57%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy Swiss-Prot
Match: Q43199 (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum OX=4565 GN=APT1 PE=2 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 5.3e-69 Identity = 123/173 (71.10%), Postives = 150/173 (86.71%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy Swiss-Prot
Match: Q42563 (Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=APT2 PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.2e-68 Identity = 128/173 (73.99%), Postives = 148/173 (85.55%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy Swiss-Prot
Match: P31166 (Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APT1 PE=1 SV=2) HSP 1 Score: 260.0 bits (663), Expect = 2.0e-68 Identity = 125/174 (71.84%), Postives = 149/174 (85.63%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy TrEMBL
Match: A0A6J1KXS0 (Adenine phosphoribosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111498514 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 6.2e-97 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy TrEMBL
Match: A0A6J1FW04 (Adenine phosphoribosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111447820 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 6.2e-97 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy TrEMBL
Match: A0A6J1E5Y7 (Adenine phosphoribosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111431026 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.1e-89 Identity = 164/182 (90.11%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy TrEMBL
Match: A0A6J1HN58 (Adenine phosphoribosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111465123 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 2.8e-89 Identity = 164/182 (90.11%), Postives = 176/182 (96.70%), Query Frame = 0
BLAST of Carg21596 vs. ExPASy TrEMBL
Match: A0A6J1DID2 (Adenine phosphoribosyltransferase OS=Momordica charantia OX=3673 GN=LOC111021357 PE=3 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 9.0e-88 Identity = 166/182 (91.21%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of Carg21596 vs. TAIR 10
Match: AT4G22570.1 (adenine phosphoribosyl transferase 3 ) HSP 1 Score: 298.9 bits (764), Expect = 2.8e-81 Identity = 146/178 (82.02%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Carg21596 vs. TAIR 10
Match: AT4G12440.2 (adenine phosphoribosyl transferase 4 ) HSP 1 Score: 290.4 bits (742), Expect = 9.9e-79 Identity = 143/182 (78.57%), Postives = 162/182 (89.01%), Query Frame = 0
BLAST of Carg21596 vs. TAIR 10
Match: AT1G80050.1 (adenine phosphoribosyl transferase 2 ) HSP 1 Score: 260.8 bits (665), Expect = 8.4e-70 Identity = 128/173 (73.99%), Postives = 148/173 (85.55%), Query Frame = 0
BLAST of Carg21596 vs. TAIR 10
Match: AT1G27450.1 (adenine phosphoribosyl transferase 1 ) HSP 1 Score: 260.0 bits (663), Expect = 1.4e-69 Identity = 125/174 (71.84%), Postives = 149/174 (85.63%), Query Frame = 0
BLAST of Carg21596 vs. TAIR 10
Match: AT1G27450.2 (adenine phosphoribosyl transferase 1 ) HSP 1 Score: 260.0 bits (663), Expect = 1.4e-69 Identity = 125/174 (71.84%), Postives = 149/174 (85.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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