Carg21562 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21562
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	Carg_Chr18: 10229397 .. 10230428 (-)
RNA-Seq Expression	Carg21562
Synteny	Carg21562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAACCCACCACTTCCATTAAATCTCCGCCACCCGACACCAGTCTCGGCGCCGCTACCAGTCTCGTTTTGGACTCTGCTGACTCCAGCTCCGCCGTCGGTGGCGGCGTCGAGGCTGAATCCAGGAAGCTACCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAATGGCCGATGGGGCGCGCAGATTTACGAGAAGCACCAAAGGGTATGGCTGGGAACATTCAATGAAGAAGATGAAGCCGCACGTGCCTACGACGTGGCTGCTCAACGATTCCGTGGTCGTGACGCCGTTACCAATTTCAAAACGTTATCTCACGGCCAAGTAGACGACGTCGTATCCGCCTTTCTTAACTCTCATTCCAAAGCTGAAATCGTTGACATGCTACGTAAACATACCTACCTAGACGAACTACACCAAAGCAAACGAAACGCCGATTTGTTATCTTCGGATCGTAAAAGAAACGGTTCGTTATTATCCGGTCCGGATAATGAACCGGATTCCGCTCGGGAACTTTTATTTGAAAAAGCCGTTACGCCTAGCGATGTTGGGAAATTGAACCGTTTAGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCCGCCGGTTCCGCCGGTTCAGCAGCTTCGTCCAAAGGACTTCTCTTAAACTTCGAAGACGGCGTCGGGAAAGTGTGGCGGTTCAGGTACTCGTATTGGAATAGTAGTCAAAGCTACGTGTTGACCAAAGGGTGGAGCCGGTTCGTTAAGGAGAAGAACCTAACAGCCGGTGACGTCGTGAGCTTCTTGAAATCGACCGGTGAAGATAAGCAGCTATACATTGAATGGAAGGCGAGTAAGAGTGCAGCCTCGACCGGGTCCAACACGAACCCGGTTCAAACGGTGAGATTATTTGGAGTGGACATTATGAAAGTAACGCCGAGTAGTGGGTGCGGTGAGAAGAGGAGAAGAGAAATGGAGTTTATGAGTTCAGAATGTAACAAAAAACAAAGGATCGTCGGAGCATTGTAA

mRNA sequence

ATGGACCAACCCACCACTTCCATTAAATCTCCGCCACCCGACACCAGTCTCGGCGCCGCTACCAGTCTCGTTTTGGACTCTGCTGACTCCAGCTCCGCCGTCGGTGGCGGCGTCGAGGCTGAATCCAGGAAGCTACCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAATGGCCGATGGGGCGCGCAGATTTACGAGAAGCACCAAAGGGTATGGCTGGGAACATTCAATGAAGAAGATGAAGCCGCACGTGCCTACGACGTGGCTGCTCAACGATTCCGTGGTCGTGACGCCGTTACCAATTTCAAAACGTTATCTCACGGCCAAGTAGACGACGTCGTATCCGCCTTTCTTAACTCTCATTCCAAAGCTGAAATCGTTGACATGCTACGTAAACATACCTACCTAGACGAACTACACCAAAGCAAACGAAACGCCGATTTGTTATCTTCGGATCGTAAAAGAAACGGTTCGTTATTATCCGGTCCGGATAATGAACCGGATTCCGCTCGGGAACTTTTATTTGAAAAAGCCGTTACGCCTAGCGATGTTGGGAAATTGAACCGTTTAGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCCGCCGGTTCCGCCGGTTCAGCAGCTTCGTCCAAAGGACTTCTCTTAAACTTCGAAGACGGCGTCGGGAAAGTGTGGCGGTTCAGGTACTCGTATTGGAATAGTAGTCAAAGCTACGTGTTGACCAAAGGGTGGAGCCGGTTCGTTAAGGAGAAGAACCTAACAGCCGGTGACGTCGTGAGCTTCTTGAAATCGACCGGTGAAGATAAGCAGCTATACATTGAATGGAAGGCGAGTAAGAGTGCAGCCTCGACCGGGTCCAACACGAACCCGGTTCAAACGGTGAGATTATTTGGAGTGGACATTATGAAAGTAACGCCGAGTAGTGGGTGCGGTGAGAAGAGGAGAAGAGAAATGGAGTTTATGAGTTCAGAATGTAACAAAAAACAAAGGATCGTCGGAGCATTGTAA

Coding sequence (CDS)

ATGGACCAACCCACCACTTCCATTAAATCTCCGCCACCCGACACCAGTCTCGGCGCCGCTACCAGTCTCGTTTTGGACTCTGCTGACTCCAGCTCCGCCGTCGGTGGCGGCGTCGAGGCTGAATCCAGGAAGCTACCCTCCTCCCGTTTCAAAGGAGTGGTCCCACAGCCCAATGGCCGATGGGGCGCGCAGATTTACGAGAAGCACCAAAGGGTATGGCTGGGAACATTCAATGAAGAAGATGAAGCCGCACGTGCCTACGACGTGGCTGCTCAACGATTCCGTGGTCGTGACGCCGTTACCAATTTCAAAACGTTATCTCACGGCCAAGTAGACGACGTCGTATCCGCCTTTCTTAACTCTCATTCCAAAGCTGAAATCGTTGACATGCTACGTAAACATACCTACCTAGACGAACTACACCAAAGCAAACGAAACGCCGATTTGTTATCTTCGGATCGTAAAAGAAACGGTTCGTTATTATCCGGTCCGGATAATGAACCGGATTCCGCTCGGGAACTTTTATTTGAAAAAGCCGTTACGCCTAGCGATGTTGGGAAATTGAACCGTTTAGTTATCCCTAAACAACACGCCGAGAAAAACTTCCCTCTCCAAACCGGTTCCGCCGGTTCCGCCGGTTCAGCAGCTTCGTCCAAAGGACTTCTCTTAAACTTCGAAGACGGCGTCGGGAAAGTGTGGCGGTTCAGGTACTCGTATTGGAATAGTAGTCAAAGCTACGTGTTGACCAAAGGGTGGAGCCGGTTCGTTAAGGAGAAGAACCTAACAGCCGGTGACGTCGTGAGCTTCTTGAAATCGACCGGTGAAGATAAGCAGCTATACATTGAATGGAAGGCGAGTAAGAGTGCAGCCTCGACCGGGTCCAACACGAACCCGGTTCAAACGGTGAGATTATTTGGAGTGGACATTATGAAAGTAACGCCGAGTAGTGGGTGCGGTGAGAAGAGGAGAAGAGAAATGGAGTTTATGAGTTCAGAATGTAACAAAAAACAAAGGATCGTCGGAGCATTGTAA

Protein sequence

MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL

Homology

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BLAST of Carg21562 vs. NCBI nr
Match: KAG7013050.1 (AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 675.6 bits (1742), Expect = 2.2e-190
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60
           MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR
Sbjct: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60

Query: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN
Sbjct: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120

Query: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180
           SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV
Sbjct: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240
           TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240

Query: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300
           NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ
Sbjct: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300

Query: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL
Sbjct: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 343

[Close]

BLAST of Carg21562 vs. NCBI nr
Match: KAG6573992.1 (AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 674.5 bits (1739), Expect = 4.9e-190
Identity = 342/343 (99.71%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60
           MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR
Sbjct: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60

Query: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN
Sbjct: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120

Query: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180
           SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV
Sbjct: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240
           TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240

Query: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300
           NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ
Sbjct: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300

Query: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           TVRLFGVDIMKVTPSSGCGEKRRREMEF+SSECNKKQRIVGAL
Sbjct: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 343

[Close]

BLAST of Carg21562 vs. NCBI nr
Match: XP_023542218.1 (AP2/ERF and B3 domain-containing transcription repressor TEM1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181
Identity = 331/341 (97.07%), Postives = 333/341 (97.65%), Query Frame = 0


Query: 3   QPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWG 62
           QPTTSIKSPPPD      TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWG
Sbjct: 4   QPTTSIKSPPPD------TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWG 63

Query: 63  AQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSH 122
           AQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSH
Sbjct: 64  AQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSH 123

Query: 123 SKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAVTP 182
           SKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSG DNEPDSARELLFEKAVTP
Sbjct: 124 SKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGSDNEPDSARELLFEKAVTP 183

Query: 183 SDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNS 242
           SDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNS
Sbjct: 184 SDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNS 243

Query: 243 SQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTV 302
           SQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGS+TNPVQTV
Sbjct: 244 SQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSSTNPVQTV 303

Query: 303 RLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           RLFGVDIMKVTPSSGC EKRRREMEF+SSECNKKQRIVGAL
Sbjct: 304 RLFGVDIMKVTPSSGCSEKRRREMEFLSSECNKKQRIVGAL 338

[Close]

BLAST of Carg21562 vs. NCBI nr
Match: XP_022945896.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita moschata])

HSP 1 Score: 642.9 bits (1657), Expect = 1.6e-180
Identity = 331/343 (96.50%), Postives = 332/343 (96.79%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60
           MDQPTTSIKSPPPD      TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR
Sbjct: 1   MDQPTTSIKSPPPD------TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60

Query: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN
Sbjct: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120

Query: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180
           SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLL G DNEPDSARELLFEKAV
Sbjct: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEKAV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240
           TPSDVGKLNRLVIPKQHAEKNFPLQT   GSAGSAASSKGLLLNFEDGVGKVWRFRYSYW
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLQT---GSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240

Query: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300
           NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ
Sbjct: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300

Query: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           TVRLFGVDIMKVTPSSGCGEKRRREMEF+SSECNKKQRIVGAL
Sbjct: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 334

[Close]

BLAST of Carg21562 vs. NCBI nr
Match: XP_022968236.1 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita maxima])

HSP 1 Score: 627.1 bits (1616), Expect = 9.0e-176
Identity = 324/343 (94.46%), Postives = 327/343 (95.34%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60
           MDQPTTSIKSPP DTSLG ATS+VLDSADSS+AVG GVEAESRKLPSSRFKGVVPQPNGR
Sbjct: 1   MDQPTTSIKSPPLDTSLGGATSIVLDSADSSTAVGCGVEAESRKLPSSRFKGVVPQPNGR 60

Query: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK LSHGQVDDVVSAFLN
Sbjct: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHGQVDDVVSAFLN 120

Query: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180
           SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGS LSG DNE DSARELLFEKAV
Sbjct: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGS-LSGSDNESDSARELLFEKAV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240
           TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSA      KGLLLNFEDGVGKVWRFRYSYW
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSA------KGLLLNFEDGVGKVWRFRYSYW 240

Query: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300
           NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKS  STGSNTNPVQ
Sbjct: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSTPSTGSNTNPVQ 300

Query: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           TVRLFGVDIMKVTPSSGC EKRRREMEF+SSECNKKQRIVGAL
Sbjct: 301 TVRLFGVDIMKVTPSSGCSEKRRREMEFLSSECNKKQRIVGAL 336

[Close]

BLAST of Carg21562 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.8e-102
Identity = 213/359 (59.33%), Postives = 252/359 (70.19%), Query Frame = 0


Query: 3   QPTTSIK---SPPPDTSL------GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGV 62
           +PTT+ +   S PP TS+         +S+VLDS +       GVE ESRKLPSS++KGV
Sbjct: 23  KPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSEN-------GVETESRKLPSSKYKGV 82

Query: 63  VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDD 122
           VPQPNGRWGAQIYEKHQRVWLGTFNEE+EAA +YD+A +RFRGRDAVTNFK+   G  +D
Sbjct: 83  VPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDG--ND 142

Query: 123 VVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPD-SAR 182
             SAFL++HSKAEIVDMLRKHTY DE  QS+R    ++ D KR+G   +   N+    AR
Sbjct: 143 AESAFLDAHSKAEIVDMLRKHTYADEFEQSRRK--FVNGDGKRSGLETATYGNDAVLRAR 202

Query: 183 ELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKV 242
           E+LFEK VTPSDVGKLNRLVIPKQHAEK+FPL   +     + + +KG+L+N ED  GKV
Sbjct: 203 EVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKV 262

Query: 243 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAAST 302
           WRFRYSYWNSSQSYVLTKGWSRFVKEKNL AGDVV F +STG D+QLYI WK   S    
Sbjct: 263 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSS---- 322

Query: 303 GSNTNPVQT-VRLFGVDIMKVTPSSG-------CGEKRRREMEFMSSECNKKQRIVGAL 344
                PVQT VRLFGV+I  V+            G+KR RE +  S  C+KKQ I+  L
Sbjct: 323 -----PVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of Carg21562 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.0e-102
Identity = 217/356 (60.96%), Postives = 256/356 (71.91%), Query Frame = 0


Query: 5   TTSIK-SPPPDTSL------GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQP 64
           TT+ K SPPP  +L         +S+VLD  +       G+E ESRKLPSS++KGVVPQP
Sbjct: 20  TTAKKLSPPPAAALRLYRMGSGGSSVVLDPEN-------GLETESRKLPSSKYKGVVPQP 79

Query: 65  NGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSA 124
           NGRWGAQIYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV NFK +    ++D   A
Sbjct: 80  NGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV----LEDGDLA 139

Query: 125 FLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDR--KRNGSLLSGPDNEPDSARELL 184
           FL +HSKAEIVDMLRKHTY DEL Q+ +    LS D   KRNGS  +  D +    RE+L
Sbjct: 140 FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQND-KVLKTREVL 199

Query: 185 FEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRF 244
           FEKAVTPSDVGKLNRLVIPKQHAEK+FPL       + S A +KG+L+NFED  GKVWRF
Sbjct: 200 FEKAVTPSDVGKLNRLVIPKQHAEKHFPL------PSPSPAVTKGVLINFEDVNGKVWRF 259

Query: 245 RYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSN 304
           RYSYWNSSQSYVLTKGWSRFVKEKNL AGDVV+F +STG ++QLYI+WK       +G  
Sbjct: 260 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWK-----VRSGPR 319

Query: 305 TNPVQ-TVRLFGVDIMKVTP------SSGCGEKRRREMEFM-SSECNKKQRIVGAL 344
            NPVQ  VRLFGVDI  VT        + CG KR R+++ M +  C+KKQ I+ AL
Sbjct: 320 ENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Carg21562 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 4.9e-100
Identity = 209/337 (62.02%), Postives = 244/337 (72.40%), Query Frame = 0


Query: 17  LGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGT 76
           +G+ +S+VLDS +       GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGT
Sbjct: 36  MGSGSSVVLDSEN-------GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGT 95

Query: 77  FNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTY 136
           FNEEDEAARAYDVA  RFR RDAVTNFK +   ++D+    FLNSHSK+EIVDMLRKHTY
Sbjct: 96  FNEEDEAARAYDVAVHRFRRRDAVTNFKDV---KMDEDEVDFLNSHSKSEIVDMLRKHTY 155

Query: 137 LDELHQSKRNADLLSSDRKRNGS-----LLSGPDNEPDS-----ARELLFEKAVTPSDVG 196
            +EL QSKR        R  NG+     L SG  N+  S     + E LFEKAVTPSDVG
Sbjct: 156 NEELEQSKRR-------RNGNGNMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTPSDVG 215

Query: 197 KLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSY 256
           KLNRLVIPK HAEK+FPL +       S  S KG+LLNFED  GKVWRFRYSYWNSSQSY
Sbjct: 216 KLNRLVIPKHHAEKHFPLPS-------SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSY 275

Query: 257 VLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFG 316
           VLTKGWSRFVKEKNL AGDVVSF +S G+D+QLYI WK     + +GS+ +  + +RLFG
Sbjct: 276 VLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK-----SRSGSDLDAGRVLRLFG 335

Query: 317 VDIM-KVTPSSGCGEKRRREMEFMSSECNKKQRIVGA 343
           V+I  + + +   G KR  + E +S  C+KKQRI  A
Sbjct: 336 VNISPESSRNDVVGNKRVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of Carg21562 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.4e-91
Identity = 200/349 (57.31%), Postives = 238/349 (68.19%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTS---------LGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFK 60
           +D+ +T+  S P   S         +G+ TS+VL   DS + V   VEAESRKLPSSRFK
Sbjct: 7   VDESSTTTDSIPARKSSSPASLLYRMGSGTSVVL---DSENGVEVEVEAESRKLPSSRFK 66

Query: 61  GVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQV 120
           GVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAA RFRGRDAVTNFK  +  + 
Sbjct: 67  GVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEE 126

Query: 121 DDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSA 180
            +    FLN+HSK+EIVDMLRKHTY +EL Q KRN D  +       +L S         
Sbjct: 127 VE----FLNAHSKSEIVDMLRKHTYKEELDQRKRNRD-GNGKETTAFALASMVVMTGFKT 186

Query: 181 RELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGK 240
            ELLFEK VTPSDVGKLNRLVIPK  AEK+FPL  G+     +  S KG+LLNFED  GK
Sbjct: 187 AELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGN-----NNVSVKGMLLNFEDVNGK 246

Query: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAAS 300
           VWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++SF +S  +D++ +I WK     + 
Sbjct: 247 VWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWK-----SK 306

Query: 301 TGSNTNPVQTVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIV 341
           +G +    + +RLFGVDI   + ++    K   E+   S  C KKQR++
Sbjct: 307 SGLDLETGRVMRLFGVDI---SLNAVVVVKETTEVLMSSLRC-KKQRVL 333

[Close]

BLAST of Carg21562 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.7e-90
Identity = 196/347 (56.48%), Postives = 231/347 (66.57%), Query Frame = 0


Query: 13  PDTSLGAATSLVLDSADSSSAV------------GGGVEAESRKLPSSRFKGVVPQPNGR 72
           P   +G+  S V+D+A+  +              GGG      KLPSS+FKGVVPQPNGR
Sbjct: 33  PLERMGSGASAVVDAAEPGAEADSGSGGRVCGGGGGGAGGAGGKLPSSKFKGVVPQPNGR 92

Query: 73  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVS-AFL 132
           WGAQIYE+HQRVWLGTF  ED+AARAYDVAAQRFRGRDAVTNF+ L+    D      FL
Sbjct: 93  WGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNFRPLAEADPDAAAELRFL 152

Query: 133 NSHSKAEIVDMLRKHTYLDELHQSKRN-ADLLSSDRKRNGSLLSGPDNEPDS------AR 192
            + SKAE+VDMLRKHTY DEL QSKR  A    S      SL +G  + P S      AR
Sbjct: 153 ATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLSNGHLSSPRSPFAPAAAR 212

Query: 193 ELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKV 252
           + LF+K VTPSDVGKLNRLVIPKQHAEK+FPLQ  SAG       SKG+LLNFED  GKV
Sbjct: 213 DHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAG-----GESKGVLLNFEDAAGKV 272

Query: 253 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLK---STGEDKQLYIEWKASKSA 312
           WRFRYSYWNSSQSYVLTKGWSRFVKEK L AGDVV F +   S G+D +L+I+ K  +S 
Sbjct: 273 WRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFIDCKLVRST 332

Query: 313 ASTGSN------TNPVQTVRLFGVDIM----KVTPSSGCGEKRRREM 327
            +  ++       +PV+ VRLFGVD++     V   +GC  KR R++
Sbjct: 333 GAALASPADQPAPSPVKAVRLFGVDLLTAPAPVEQMAGC--KRARDL 372

[Close]

BLAST of Carg21562 vs. ExPASy TrEMBL
Match: A0A6J1G259 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita moschata OX=3662 GN=LOC111449999 PE=3 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 7.7e-181
Identity = 331/343 (96.50%), Postives = 332/343 (96.79%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60
           MDQPTTSIKSPPPD      TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR
Sbjct: 1   MDQPTTSIKSPPPD------TSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60

Query: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN
Sbjct: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120

Query: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180
           SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLL G DNEPDSARELLFEKAV
Sbjct: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLPGSDNEPDSARELLFEKAV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240
           TPSDVGKLNRLVIPKQHAEKNFPLQT   GSAGSAASSKGLLLNFEDGVGKVWRFRYSYW
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLQT---GSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240

Query: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300
           NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ
Sbjct: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300

Query: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           TVRLFGVDIMKVTPSSGCGEKRRREMEF+SSECNKKQRIVGAL
Sbjct: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFLSSECNKKQRIVGAL 334

[Close]

BLAST of Carg21562 vs. ExPASy TrEMBL
Match: A0A6J1HUB4 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita maxima OX=3661 GN=LOC111467534 PE=3 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.4e-176
Identity = 324/343 (94.46%), Postives = 327/343 (95.34%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTSLGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 60
           MDQPTTSIKSPP DTSLG ATS+VLDSADSS+AVG GVEAESRKLPSSRFKGVVPQPNGR
Sbjct: 1   MDQPTTSIKSPPLDTSLGGATSIVLDSADSSTAVGCGVEAESRKLPSSRFKGVVPQPNGR 60

Query: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLN 120
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK LSHGQVDDVVSAFLN
Sbjct: 61  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLSHGQVDDVVSAFLN 120

Query: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEKAV 180
           SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGS LSG DNE DSARELLFEKAV
Sbjct: 121 SHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGS-LSGSDNESDSARELLFEKAV 180

Query: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYW 240
           TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSA      KGLLLNFEDGVGKVWRFRYSYW
Sbjct: 181 TPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSA------KGLLLNFEDGVGKVWRFRYSYW 240

Query: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQ 300
           NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKS  STGSNTNPVQ
Sbjct: 241 NSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSTPSTGSNTNPVQ 300

Query: 301 TVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           TVRLFGVDIMKVTPSSGC EKRRREMEF+SSECNKKQRIVGAL
Sbjct: 301 TVRLFGVDIMKVTPSSGCSEKRRREMEFLSSECNKKQRIVGAL 336

[Close]

BLAST of Carg21562 vs. ExPASy TrEMBL
Match: A0A5A7SZL8 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00730 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.6e-149
Identity = 282/345 (81.74%), Postives = 303/345 (87.83%), Query Frame = 0


Query: 5   TTSIKSPPPDTSL----GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 64
           +T  KSPPPD SL       TS+VLDS DSS   GGGVEAESRKLPSSR+KGVVPQPNGR
Sbjct: 11  STESKSPPPDNSLCRVGSGVTSVVLDS-DSS---GGGVEAESRKLPSSRYKGVVPQPNGR 70

Query: 65  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSH--GQVDDVVSAF 124
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK L+H  G+ DD+VSAF
Sbjct: 71  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAF 130

Query: 125 LNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEK 184
           LNSHSKAEIVDMLRKHTYLDELHQSKRNA L  SDRKRN  LLSG D+EP++ARELLFEK
Sbjct: 131 LNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRN-RLLSGSDDEPETARELLFEK 190

Query: 185 AVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYS 244
           AVTPSDVGKLNRLVIPKQHAEKNFPLQT      GS ASSKGLLLNFEDG GKVWRFRYS
Sbjct: 191 AVTPSDVGKLNRLVIPKQHAEKNFPLQT------GSTASSKGLLLNFEDGGGKVWRFRYS 250

Query: 245 YWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNP 304
           YWNSSQSYVLTKGWSRFVKEKNL AGD+VSFLKSTG+DKQLYIEWKA K++ +TGS  NP
Sbjct: 251 YWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKASTTTGSAINP 310

Query: 305 VQTVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           VQT RLFGVDI+K +P+SGC EKRRRE+EF++ +C KKQRIVGAL
Sbjct: 311 VQTFRLFGVDIIKASPNSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of Carg21562 vs. ExPASy TrEMBL
Match: A0A1S3BG02 (AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis melo OX=3656 GN=LOC103489254 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.6e-149
Identity = 282/345 (81.74%), Postives = 303/345 (87.83%), Query Frame = 0


Query: 5   TTSIKSPPPDTSL----GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 64
           +T  KSPPPD SL       TS+VLDS DSS   GGGVEAESRKLPSSR+KGVVPQPNGR
Sbjct: 11  STESKSPPPDNSLCRVGSGVTSVVLDS-DSS---GGGVEAESRKLPSSRYKGVVPQPNGR 70

Query: 65  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSH--GQVDDVVSAF 124
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK L+H  G+ DD+VSAF
Sbjct: 71  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAF 130

Query: 125 LNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEK 184
           LNSHSKAEIVDMLRKHTYLDELHQSKRNA L  SDRKRN  LLSG D+EP++ARELLFEK
Sbjct: 131 LNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKRN-RLLSGSDDEPETARELLFEK 190

Query: 185 AVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYS 244
           AVTPSDVGKLNRLVIPKQHAEKNFPLQT      GS ASSKGLLLNFEDG GKVWRFRYS
Sbjct: 191 AVTPSDVGKLNRLVIPKQHAEKNFPLQT------GSTASSKGLLLNFEDGGGKVWRFRYS 250

Query: 245 YWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNP 304
           YWNSSQSYVLTKGWSRFVKEKNL AGD+VSFLKSTG+DKQLYIEWKA K++ +TGS  NP
Sbjct: 251 YWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKASTTTGSAINP 310

Query: 305 VQTVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           VQT RLFGVDI+K +P+SGC EKRRRE+EF++ +C KKQRIVGAL
Sbjct: 311 VQTFRLFGVDIIKASPNSGCSEKRRRELEFLTLQCTKKQRIVGAL 344

[Close]

BLAST of Carg21562 vs. ExPASy TrEMBL
Match: A0A0A0KR17 (DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.9e-149
Identity = 280/345 (81.16%), Postives = 303/345 (87.83%), Query Frame = 0


Query: 5   TTSIKSPPPDTSL----GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGR 64
           +T  KSPPPDTSL       TS+VLDS DSS   GGGVEAESRKLPSSR+KGVVPQPNGR
Sbjct: 11  STESKSPPPDTSLCRVGSGVTSVVLDS-DSS---GGGVEAESRKLPSSRYKGVVPQPNGR 70

Query: 65  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSH--GQVDDVVSAF 124
           WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFK L+H  G+ DD+VSAF
Sbjct: 71  WGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLTHGGGEEDDIVSAF 130

Query: 125 LNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSARELLFEK 184
           LNSHSKAEIVDMLRKHTYLDELHQSKRNA L  SDRK+N   LSG D++P++ARELLFEK
Sbjct: 131 LNSHSKAEIVDMLRKHTYLDELHQSKRNAGLSGSDRKQN-RFLSGSDDDPETARELLFEK 190

Query: 185 AVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYS 244
           AVTPSDVGKLNRLVIPKQHAEKNFPLQT      GS ASSKGLLLNFEDG GKVWRFRYS
Sbjct: 191 AVTPSDVGKLNRLVIPKQHAEKNFPLQT------GSTASSKGLLLNFEDGGGKVWRFRYS 250

Query: 245 YWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNP 304
           YWNSSQSYVLTKGWSRFVKEKNL AGD+VSFLKSTG+DKQLYIEWKA K + +TGS  NP
Sbjct: 251 YWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYIEWKARKPSTTTGSAINP 310

Query: 305 VQTVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIVGAL 344
           VQT RLFGVDI+KV+P+SGC EKRRRE+EF++ +C KKQR+VGAL
Sbjct: 311 VQTFRLFGVDIIKVSPNSGCSEKRRRELEFLTLQCTKKQRVVGAL 344

[Close]

BLAST of Carg21562 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 374.0 bits (959), Expect = 1.3e-103
Identity = 213/359 (59.33%), Postives = 252/359 (70.19%), Query Frame = 0


Query: 3   QPTTSIK---SPPPDTSL------GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGV 62
           +PTT+ +   S PP TS+         +S+VLDS +       GVE ESRKLPSS++KGV
Sbjct: 23  KPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSEN-------GVETESRKLPSSKYKGV 82

Query: 63  VPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDD 122
           VPQPNGRWGAQIYEKHQRVWLGTFNEE+EAA +YD+A +RFRGRDAVTNFK+   G  +D
Sbjct: 83  VPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDG--ND 142

Query: 123 VVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPD-SAR 182
             SAFL++HSKAEIVDMLRKHTY DE  QS+R    ++ D KR+G   +   N+    AR
Sbjct: 143 AESAFLDAHSKAEIVDMLRKHTYADEFEQSRRK--FVNGDGKRSGLETATYGNDAVLRAR 202

Query: 183 ELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKV 242
           E+LFEK VTPSDVGKLNRLVIPKQHAEK+FPL   +     + + +KG+L+N ED  GKV
Sbjct: 203 EVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKV 262

Query: 243 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAAST 302
           WRFRYSYWNSSQSYVLTKGWSRFVKEKNL AGDVV F +STG D+QLYI WK   S    
Sbjct: 263 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSS---- 322

Query: 303 GSNTNPVQT-VRLFGVDIMKVTPSSG-------CGEKRRREMEFMSSECNKKQRIVGAL 344
                PVQT VRLFGV+I  V+            G+KR RE +  S  C+KKQ I+  L
Sbjct: 323 -----PVQTVVRLFGVNIFNVSNEKPNDVAVECVGKKRSREDDLFSLGCSKKQAIINIL 361

[Close]

BLAST of Carg21562 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 372.9 bits (956), Expect = 2.8e-103
Identity = 217/356 (60.96%), Postives = 256/356 (71.91%), Query Frame = 0


Query: 5   TTSIK-SPPPDTSL------GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQP 64
           TT+ K SPPP  +L         +S+VLD  +       G+E ESRKLPSS++KGVVPQP
Sbjct: 20  TTAKKLSPPPAAALRLYRMGSGGSSVVLDPEN-------GLETESRKLPSSKYKGVVPQP 79

Query: 65  NGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSA 124
           NGRWGAQIYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV NFK +    ++D   A
Sbjct: 80  NGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV----LEDGDLA 139

Query: 125 FLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDR--KRNGSLLSGPDNEPDSARELL 184
           FL +HSKAEIVDMLRKHTY DEL Q+ +    LS D   KRNGS  +  D +    RE+L
Sbjct: 140 FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQND-KVLKTREVL 199

Query: 185 FEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRF 244
           FEKAVTPSDVGKLNRLVIPKQHAEK+FPL       + S A +KG+L+NFED  GKVWRF
Sbjct: 200 FEKAVTPSDVGKLNRLVIPKQHAEKHFPL------PSPSPAVTKGVLINFEDVNGKVWRF 259

Query: 245 RYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSN 304
           RYSYWNSSQSYVLTKGWSRFVKEKNL AGDVV+F +STG ++QLYI+WK       +G  
Sbjct: 260 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWK-----VRSGPR 319

Query: 305 TNPVQ-TVRLFGVDIMKVTP------SSGCGEKRRREMEFM-SSECNKKQRIVGAL 344
            NPVQ  VRLFGVDI  VT        + CG KR R+++ M +  C+KKQ I+ AL
Sbjct: 320 ENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Carg21562 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 372.9 bits (956), Expect = 2.8e-103
Identity = 217/356 (60.96%), Postives = 256/356 (71.91%), Query Frame = 0


Query: 5   TTSIK-SPPPDTSL------GAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQP 64
           TT+ K SPPP  +L         +S+VLD  +       G+E ESRKLPSS++KGVVPQP
Sbjct: 20  TTAKKLSPPPAAALRLYRMGSGGSSVVLDPEN-------GLETESRKLPSSKYKGVVPQP 79

Query: 65  NGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSA 124
           NGRWGAQIYEKHQRVWLGTFNE++EAAR+YD+AA RFRGRDAV NFK +    ++D   A
Sbjct: 80  NGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV----LEDGDLA 139

Query: 125 FLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDR--KRNGSLLSGPDNEPDSARELL 184
           FL +HSKAEIVDMLRKHTY DEL Q+ +    LS D   KRNGS  +  D +    RE+L
Sbjct: 140 FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQND-KVLKTREVL 199

Query: 185 FEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRF 244
           FEKAVTPSDVGKLNRLVIPKQHAEK+FPL       + S A +KG+L+NFED  GKVWRF
Sbjct: 200 FEKAVTPSDVGKLNRLVIPKQHAEKHFPL------PSPSPAVTKGVLINFEDVNGKVWRF 259

Query: 245 RYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSN 304
           RYSYWNSSQSYVLTKGWSRFVKEKNL AGDVV+F +STG ++QLYI+WK       +G  
Sbjct: 260 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWK-----VRSGPR 319

Query: 305 TNPVQ-TVRLFGVDIMKVTP------SSGCGEKRRREMEFM-SSECNKKQRIVGAL 344
            NPVQ  VRLFGVDI  VT        + CG KR R+++ M +  C+KKQ I+ AL
Sbjct: 320 ENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Carg21562 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 365.9 bits (938), Expect = 3.5e-101
Identity = 209/337 (62.02%), Postives = 244/337 (72.40%), Query Frame = 0


Query: 17  LGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGT 76
           +G+ +S+VLDS +       GVEAESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGT
Sbjct: 36  MGSGSSVVLDSEN-------GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGT 95

Query: 77  FNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQVDDVVSAFLNSHSKAEIVDMLRKHTY 136
           FNEEDEAARAYDVA  RFR RDAVTNFK +   ++D+    FLNSHSK+EIVDMLRKHTY
Sbjct: 96  FNEEDEAARAYDVAVHRFRRRDAVTNFKDV---KMDEDEVDFLNSHSKSEIVDMLRKHTY 155

Query: 137 LDELHQSKRNADLLSSDRKRNGS-----LLSGPDNEPDS-----ARELLFEKAVTPSDVG 196
            +EL QSKR        R  NG+     L SG  N+  S     + E LFEKAVTPSDVG
Sbjct: 156 NEELEQSKRR-------RNGNGNMTRTLLTSGLSNDGVSTTGFRSAEALFEKAVTPSDVG 215

Query: 197 KLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSY 256
           KLNRLVIPK HAEK+FPL +       S  S KG+LLNFED  GKVWRFRYSYWNSSQSY
Sbjct: 216 KLNRLVIPKHHAEKHFPLPS-------SNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSY 275

Query: 257 VLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAASTGSNTNPVQTVRLFG 316
           VLTKGWSRFVKEKNL AGDVVSF +S G+D+QLYI WK     + +GS+ +  + +RLFG
Sbjct: 276 VLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK-----SRSGSDLDAGRVLRLFG 335

Query: 317 VDIM-KVTPSSGCGEKRRREMEFMSSECNKKQRIVGA 343
           V+I  + + +   G KR  + E +S  C+KKQRI  A
Sbjct: 336 VNISPESSRNDVVGNKRVNDTEMLSLVCSKKQRIFHA 343

[Close]

BLAST of Carg21562 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 335.9 bits (860), Expect = 3.9e-92
Identity = 200/349 (57.31%), Postives = 238/349 (68.19%), Query Frame = 0


Query: 1   MDQPTTSIKSPPPDTS---------LGAATSLVLDSADSSSAVGGGVEAESRKLPSSRFK 60
           +D+ +T+  S P   S         +G+ TS+VL   DS + V   VEAESRKLPSSRFK
Sbjct: 7   VDESSTTTDSIPARKSSSPASLLYRMGSGTSVVL---DSENGVEVEVEAESRKLPSSRFK 66

Query: 61  GVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKTLSHGQV 120
           GVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAA RFRGRDAVTNFK  +  + 
Sbjct: 67  GVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTFEEE 126

Query: 121 DDVVSAFLNSHSKAEIVDMLRKHTYLDELHQSKRNADLLSSDRKRNGSLLSGPDNEPDSA 180
            +    FLN+HSK+EIVDMLRKHTY +EL Q KRN D  +       +L S         
Sbjct: 127 VE----FLNAHSKSEIVDMLRKHTYKEELDQRKRNRD-GNGKETTAFALASMVVMTGFKT 186

Query: 181 RELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSAGSAGSAASSKGLLLNFEDGVGK 240
            ELLFEK VTPSDVGKLNRLVIPK  AEK+FPL  G+     +  S KG+LLNFED  GK
Sbjct: 187 AELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGN-----NNVSVKGMLLNFEDVNGK 246

Query: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKSTGEDKQLYIEWKASKSAAS 300
           VWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++SF +S  +D++ +I WK     + 
Sbjct: 247 VWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWK-----SK 306

Query: 301 TGSNTNPVQTVRLFGVDIMKVTPSSGCGEKRRREMEFMSSECNKKQRIV 341
           +G +    + +RLFGVDI   + ++    K   E+   S  C KKQR++
Sbjct: 307 SGLDLETGRVMRLFGVDI---SLNAVVVVKETTEVLMSSLRC-KKQRVL 333

The following BLAST results are available for this feature:

BLAST of Carg21562 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013050.1	2.2e-190	100.00	AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbit...	[more]
KAG6573992.1	4.9e-190	99.71	AP2/ERF and B3 domain-containing transcription repressor TEM1, partial [Cucurbit...	[more]
XP_023542218.1	1.1e-181	97.07	AP2/ERF and B3 domain-containing transcription repressor TEM1-like [Cucurbita pe...	[more]
XP_022945896.1	1.6e-180	96.50	AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita mo...	[more]
XP_022968236.1	9.0e-176	94.46	AP2/ERF and B3 domain-containing transcription repressor RAV2-like [Cucurbita ma...	[more]

BLAST of Carg21562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C6M5	1.8e-102	59.33	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
P82280	4.0e-102	60.96	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q9ZWM9	4.9e-100	62.02	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
Q9LS06	5.4e-91	57.31	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
Q8RZX9	2.7e-90	56.48	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of Carg21562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G259	7.7e-181	96.50	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita ...	[more]
A0A6J1HUB4	4.4e-176	94.46	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucurbita ...	[more]
A0A5A7SZL8	1.6e-149	81.74	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A1S3BG02	1.6e-149	81.74	AP2/ERF and B3 domain-containing transcription repressor RAV2-like OS=Cucumis me...	[more]
A0A0A0KR17	5.9e-149	81.16	DNA-binding protein RAV1 OS=Cucumis sativus OX=3659 GN=Csa_5G608380 PE=3 SV=1	[more]

BLAST of Carg21562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25560.1	1.3e-103	59.33	AP2/B3 transcription factor family protein	[more]
AT1G68840.1	2.8e-103	60.96	related to ABI3/VP1 2	[more]
AT1G68840.2	2.8e-103	60.96	related to ABI3/VP1 2	[more]
AT1G13260.1	3.5e-101	62.02	related to ABI3/VP1 1	[more]
AT3G25730.1	3.9e-92	57.31	ethylene response DNA binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 176..287 e-value: 1.1E-20 score: 84.8
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 176..283 e-value: 2.2E-26 score: 91.7
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 176..287 score: 13.154529
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 175..269 e-value: 2.24579E-24 score: 93.5464
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 49..110 e-value: 7.3E-29 score: 111.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 48..96 e-value: 3.8E-9 score: 36.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 49..104 score: 20.059746
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 48..103 e-value: 6.62937E-26 score: 96.1866
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 165..296 e-value: 4.8E-44 score: 150.9
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 174..273
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 48..105 e-value: 3.6E-20 score: 73.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..169
None	No IPR available	PANTHER	PTHR31140:SF115	PROTEIN RAV1, PUTATIVE-RELATED	coord: 4..343
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 4..343
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 48..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21562-RA	Carg21562-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity