Carg21410 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTTTTTAATAAAAAAATTATAATCATATTGCAGAACCACAGACCAAACTGATTCCAGATTTTATAAAATGGGGTTTCTAAAAAACTAGAAAATGAGAAGAAAGAGATTATTAAAGGAACTTATTTTCTTACTTGAAAAAAGAAGTAATAAACACAAACCATATCGAACAAATCTTTCAACTTTTTAACTTTACAATGATGCAATAAGTTAAATGATTGTTTATGAGCTTGTTCTACAAGCCAATTCTTTACCAACAATGATTGAATGGTTTACCATATTAAAGCATGATCATTTGCTCATGGTATCATTCGAACGACAAAAAACTTCAACAACTCCTATAAACGATATTTTGAGTTTAACCTGTGGAAGTCTGAATTCAAACTTCCAACTTTTTGGTCGAGGATATACGTTTCAACCAAATGAGATAGGTTCAGATTGACACAGCTTCCACAAGCATGACCCGTATACCAACACCCTCGAGATCAAATTAATAGAAACAAACTGCAAATACACTTAAAAAGGCAGAAAAACAGCTTCTTGGAACAATTTCCAAACAGCAGTAGATTAACACAAAAAGACAACCATAAAAGGATGAGAAAAATGAGAAATTGAATACAGACAGACATAGATGATTATAATTTGTGAATACCTAAAGGGAGAGTGGTCCACTTGTTCCCTACATGTAAGTGCGCATGGGAAAGAGCCATAACTTTGTTCCTTTCTCAAAGGCAACTAAAATCAGATTATTGGGTCACCCCCAAAGATTTTCTTCATATATTTGTATGCCTTTTCTCTAAGTCCAAACTAAAACATCACAGAAATAGCCTCACGCTTGGTCCTTGAGGCCCCAAAAAGCCTTTGCTGACTGATTTTCAAAGCCTAAGATGGTAGGTTGTAACTTAAACAATGATTCGTTTTGCACCCAATTTTTCAACTTCTTCCTATAAATACCTCAGCTTCTTTATTTCTTCTCCTACAAACTTAAACATCCAGTAAATTTGACTCGACATCGCCATTTGTTCCTGTTCTTCCAATATAAACTTCTAGACATATTATCTTCCTTGTTTCTAATGGCCTGTAATGCCTGTATATTAGCTATTTCATTTCTAGCACTACCCTTCTTTATTGCTTTGGCAGCTGACCAGAGCCCTATTCAAGATTTCTGTGTAGCAGATACTGGAAGTACAGGTATTGTTTGATCTCTCCAGCTTGTTTTGGGTCCTATGCTTAGCAGTTTTAACAATTTATCTTAGTTGCTAATGAGAAGATGCTCATATTATTTTCTAAATCTTCAGCAATCTCTAGCTTAGCTACAATTTTGTTGCCTATTTCTATGGTATAGCCAACCAATGTAAGGGAGTAATCATATTCATTTATGCTAATACATCTCATTTGTGCTCTTTCTTTTAATAACTAGTCTTTCTTTCCTTCATGCTTGCATCTTTAACACATTTGTGTAGGATAATCATGATTTGCTTTCTTTCTAAGTTATCTGTCATCTTTTTCAGAAAATATAAAGTTTCTTAGATGCTACCCTTTTCCATGATTCTACTAGGACTTATCACTAAAGCATCTCATGCTGTTAGAAATTGATTGCAGTGTTACTAAATGGACTAACCTGCAAGGACCCAAAGCATGTTGTTGCCGATGACTTTTCCTTTGGCGGGCTTCACCTTGCAGCTAACACATCAAATGCTCTGGGGTGTCATGTGACTCCAGTAACTCCATCAGAAATGCCTGGACTCAACACTCTCGGCATCTCCATCATTAGAATAGACTATGCACCACGAGGCATCAACCCTCTGCACACGCACCCTCGAGCTTCTGAGCTATTGATTGTCTTGGAAGGCAGCCTAGAAGTAGGATTCATCACATCGTATCCTGAAAATCGACATATAGGGAAAGTGTTGCAGAAGGGCGATGTGTTTGTGTTCCCTATTGGTCTTGTTCACTACCAGAGAAATCCAGGTCCTACCAATGCGGTTGCTGTTGCTGCTCTCAGCAGCCAAAATCCAGGAGTTATTATGGTTGCAAATGCAGTATTTGGTTCTACTCCAAATATTTCCAGTGACATTCTAGAGAAGTCTTTTCAAATCAATAAAAATGTTATCGGCTACCTTCAAACTAAGTTCTAGATCAGAAATCTAAAAATCAGAATGTCAGAAGAGCTGATACATGATATTGTTCTACAGAATCATTTACGTCTGCTTGTTTGTAATATGCAGTACATGCATTGAATTTTCCTGAAAGAAATATCATTTTCAGTTCAAGTGAATCTCCTATTAGGTTCCCATAATAGTAGCAGAATGTGGAAGTGGTTCATGATGTAACA AATTTTTTTAATAAAAAAATTATAATCATATTGCAGAACCACAGACCAAACTGATTCCAGATTTTATAAAATGGGGTTTCTAAAAAACTAGAAAATGAGAAGAAAGAGATTATTAAAGGAACTTATTTTCTTACTTGAAAAAAGAAGTAATAAACACAAACCATATCGAACAAATCTTTCAACTTTTTAACTTTACAATGATGCAATAAGTTAAATGATTGTTTATGAGCTTGTTCTACAAGCCAATTCTTTACCAACAATGATTGAATGGTTTACCATATTAAAGCATGATCATTTGCTCATGGTATCATTCGAACGACAAAAAACTTCAACAACTCCTATAAACGATATTTTGAGTTTAACCTGTGGAAGTCTGAATTCAAACTTCCAACTTTTTGGTCGAGGATATACGTTTCAACCAAATGAGATAGGTTCAGATTGACACAGCTTCCACAAGCATGACCCGTATACCAACACCCTCGAGATCAAATTAATAGAAACAAACTGCAAATACACTTAAAAAGGCAGAAAAACAGCTTCTTGGAACAATTTCCAAACAGCAGTAGATTAACACAAAAAGACAACCATAAAAGGATGAGAAAAATGAGAAATTGAATACAGACAGACATAGATGATTATAATTTGTGAATACCTAAAGGGAGAGTGGTCCACTTGTTCCCTACATGTAAGTGCGCATGGGAAAGAGCCATAACTTTGTTCCTTTCTCAAAGGCAACTAAAATCAGATTATTGGGTCACCCCCAAAGATTTTCTTCATATATTTGTATGCCTTTTCTCTAAGTCCAAACTAAAACATCACAGAAATAGCCTCACGCTTGGTCCTTGAGGCCCCAAAAAGCCTTTGCTGACTGATTTTCAAAGCCTAAGATGGTAGGTTGTAACTTAAACAATGATTCGTTTTGCACCCAATTTTTCAACTTCTTCCTATAAATACCTCAGCTTCTTTATTTCTTCTCCTACAAACTTAAACATCCAGTAAATTTGACTCGACATCGCCATTTGTTCCTGTTCTTCCAATATAAACTTCTAGACATATTATCTTCCTTGTTTCTAATGGCCTGTAATGCCTGTATATTAGCTATTTCATTTCTAGCACTACCCTTCTTTATTGCTTTGGCAGCTGACCAGAGCCCTATTCAAGATTTCTGTGTAGCAGATACTGGAAGTACAGTGTTACTAAATGGACTAACCTGCAAGGACCCAAAGCATGTTGTTGCCGATGACTTTTCCTTTGGCGGGCTTCACCTTGCAGCTAACACATCAAATGCTCTGGGGTGTCATGTGACTCCAGTAACTCCATCAGAAATGCCTGGACTCAACACTCTCGGCATCTCCATCATTAGAATAGACTATGCACCACGAGGCATCAACCCTCTGCACACGCACCCTCGAGCTTCTGAGCTATTGATTGTCTTGGAAGGCAGCCTAGAAGTAGGATTCATCACATCGTATCCTGAAAATCGACATATAGGGAAAGTGTTGCAGAAGGGCGATGTGTTTGTGTTCCCTATTGGTCTTGTTCACTACCAGAGAAATCCAGGTCCTACCAATGCGGTTGCTGTTGCTGCTCTCAGCAGCCAAAATCCAGGAGTTATTATGGTTGCAAATGCAGTATTTGGTTCTACTCCAAATATTTCCAGTGACATTCTAGAGAAGTCTTTTCAAATCAATAAAAATGTTATCGGCTACCTTCAAACTAAGTTCTAGATCAGAAATCTAAAAATCAGAATGTCAGAAGAGCTGATACATGATATTGTTCTACAGAATCATTTACGTCTGCTTGTTTGTAATATGCAGTACATGCATTGAATTTTCCTGAAAGAAATATCATTTTCAGTTCAAGTGAATCTCCTATTAGGTTCCCATAATAGTAGCAGAATGTGGAAGTGGTTCATGATGTAACA ATGGCCTGTAATGCCTGTATATTAGCTATTTCATTTCTAGCACTACCCTTCTTTATTGCTTTGGCAGCTGACCAGAGCCCTATTCAAGATTTCTGTGTAGCAGATACTGGAAGTACAGTGTTACTAAATGGACTAACCTGCAAGGACCCAAAGCATGTTGTTGCCGATGACTTTTCCTTTGGCGGGCTTCACCTTGCAGCTAACACATCAAATGCTCTGGGGTGTCATGTGACTCCAGTAACTCCATCAGAAATGCCTGGACTCAACACTCTCGGCATCTCCATCATTAGAATAGACTATGCACCACGAGGCATCAACCCTCTGCACACGCACCCTCGAGCTTCTGAGCTATTGATTGTCTTGGAAGGCAGCCTAGAAGTAGGATTCATCACATCGTATCCTGAAAATCGACATATAGGGAAAGTGTTGCAGAAGGGCGATGTGTTTGTGTTCCCTATTGGTCTTGTTCACTACCAGAGAAATCCAGGTCCTACCAATGCGGTTGCTGTTGCTGCTCTCAGCAGCCAAAATCCAGGAGTTATTATGGTTGCAAATGCAGTATTTGGTTCTACTCCAAATATTTCCAGTGACATTCTAGAGAAGTCTTTTCAAATCAATAAAAATGTTATCGGCTACCTTCAAACTAAGTTCTAG MACNACILAISFLALPFFIALAADQSPIQDFCVADTGSTVLLNGLTCKDPKHVVADDFSFGGLHLAANTSNALGCHVTPVTPSEMPGLNTLGISIIRIDYAPRGINPLHTHPRASELLIVLEGSLEVGFITSYPENRHIGKVLQKGDVFVFPIGLVHYQRNPGPTNAVAVAALSSQNPGVIMVANAVFGSTPNISSDILEKSFQINKNVIGYLQTKF Homology
BLAST of Carg21410 vs. NCBI nr
Match: XP_022927176.1 (putative germin-like protein 2-1 [Cucurbita moschata] >KAG7019461.1 putative germin-like protein 2-3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 438.3 bits (1126), Expect = 3.7e-119 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Carg21410 vs. NCBI nr
Match: KAG6583841.1 (putative germin-like protein 2-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 437.6 bits (1124), Expect = 6.4e-119 Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Carg21410 vs. NCBI nr
Match: XP_023001039.1 (putative germin-like protein 2-1 [Cucurbita maxima]) HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117 Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 0
BLAST of Carg21410 vs. NCBI nr
Match: XP_008445501.1 (PREDICTED: putative germin-like protein 2-1 [Cucumis melo] >KAA0063762.1 putative germin-like protein 2-1 [Cucumis melo var. makuwa] >TYK05514.1 putative germin-like protein 2-1 [Cucumis melo var. makuwa]) HSP 1 Score: 405.2 bits (1040), Expect = 3.5e-109 Identity = 196/217 (90.32%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of Carg21410 vs. NCBI nr
Match: XP_038894216.1 (putative germin-like protein 2-1 [Benincasa hispida]) HSP 1 Score: 404.1 bits (1037), Expect = 7.8e-109 Identity = 195/214 (91.12%), Postives = 207/214 (96.73%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy Swiss-Prot
Match: Q6K5P9 (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491700 PE=3 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 9.1e-68 Identity = 124/198 (62.63%), Postives = 152/198 (76.77%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy Swiss-Prot
Match: Q6K5P8 (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491800 PE=3 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.6e-67 Identity = 124/197 (62.94%), Postives = 152/197 (77.16%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy Swiss-Prot
Match: Q6K5Q0 (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491600 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 8.5e-66 Identity = 121/208 (58.17%), Postives = 153/208 (73.56%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy Swiss-Prot
Match: Q6YZ99 (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0189850 PE=2 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.0e-63 Identity = 125/218 (57.34%), Postives = 155/218 (71.10%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy Swiss-Prot
Match: Q6YZY5 (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0190100 PE=1 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 3.0e-63 Identity = 122/218 (55.96%), Postives = 156/218 (71.56%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy TrEMBL
Match: A0A6J1EGZ0 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434103 PE=3 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 1.8e-119 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy TrEMBL
Match: A0A6J1KLM3 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495293 PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 5.8e-118 Identity = 213/217 (98.16%), Postives = 215/217 (99.08%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy TrEMBL
Match: A0A5D3C2J3 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00130 PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109 Identity = 196/217 (90.32%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy TrEMBL
Match: A0A1S3BCE6 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103488497 PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109 Identity = 196/217 (90.32%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of Carg21410 vs. ExPASy TrEMBL
Match: A0A6J1K448 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111490481 PE=3 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107 Identity = 193/217 (88.94%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of Carg21410 vs. TAIR 10
Match: AT3G05950.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 236.5 bits (602), Expect = 2.0e-62 Identity = 118/207 (57.00%), Postives = 152/207 (73.43%), Query Frame = 0
BLAST of Carg21410 vs. TAIR 10
Match: AT5G38940.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 230.3 bits (586), Expect = 1.4e-60 Identity = 119/213 (55.87%), Postives = 150/213 (70.42%), Query Frame = 0
BLAST of Carg21410 vs. TAIR 10
Match: AT5G39110.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 225.3 bits (573), Expect = 4.6e-59 Identity = 117/220 (53.18%), Postives = 155/220 (70.45%), Query Frame = 0
BLAST of Carg21410 vs. TAIR 10
Match: AT5G39130.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.4e-58 Identity = 113/219 (51.60%), Postives = 151/219 (68.95%), Query Frame = 0
BLAST of Carg21410 vs. TAIR 10
Match: AT5G39160.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.4e-58 Identity = 114/219 (52.05%), Postives = 151/219 (68.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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