Carg21393 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21393
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	30-kDa cleavage and polyadenylation specificity factor 30-like
Location	Carg_Chr13: 6388533 .. 6394262 (-)
RNA-Seq Expression	Carg21393
Synteny	Carg21393

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATTCCGAGGGCGTTCTCAGCTTCGATTTCGAGGGCGGCCTCGATGCCGGCCCCACTAACCCCGCCGCCACCTCCTCCTTGCCCATAATCCAGTCAGATTCTTCTTCCTTCCCCGCCGCTTCCGCCGTCTCCAACTCCGTTGCCGGCGCCGTCGGTCCTGCTGCTACAGCTGATGCTCCTGGCGCTCCAACCGGCAACGTCGGGAATCGGAGGAGCTTCCGGCAAACGGTTTGCCGGCATTGGCTTCGAAGCCTCTGTATGAAGGGCGACGCCTGTGGCTTCCTTCACCAGTATGATAAGTCTCGGATGCCCATTTGCCGATTCTTCCGTCTCTATGGCGAGTGCCGTGAGCAGGATTGCGTGTACAAACATACCAATGAAGATATTAAGGAGTGTAATATGTACGTCTTGGAACTTGGAATTCAATTTATGTCTTTTATTTGTTGGCTCTTTGTCAGATTTACATTCTTGGGTCTTTAATTTCTTTGTGTACTTTAAATAGGAGGTGATCAATCTCTGCTCTTATCGTTTATGCCCTTCTTCTTAATCCCTAGTTGTTGAATTTATTAGTATCATATGCAGTTCTTAGATTTTACACTGGGGATTTTTTGCCCTTCATCTTTAATATATATAATTTTGCAAACAAAATCTACATTCTCCCATGAGTATCCAAAAGAGCATCAAGATTGCAAATGAAGAACAGTTGCATAAGTCGTTGGCACTACGAACAGAAACTTATCCAAATCACAAGCCTCCTTCCGATCTCTTTCCTTTCTTGGTTACACTCTAGAATTCCCTTTTAACCATAAAGCTCACGAGATGGCCTTAGCTTCATTAATCCAAAGAGTTTCAAGCCTTTTCTTTAAAGTTTTTGCCACCCAACAACTGTGTCATTATTCTTTTAGTGGAACTATCAAGGACCTGTGAAAAGGACCCAAGAGAGAAAAATAATGAAATGGAGTATCCCTACGCCACTACTATATGAGCAAAGTAATAGTAGGTAATGTTGGACCTTGTTTGAATGCATACTTCGTTTCTTGTGTTTTCCCTCCGTCAATGAAATTAATGATTCCTCTAAGGATATTTAAGTTTTAAGTTTATGCATGTGTATGGCTGCAATAAGAACATAACTAATACATGTAGAATTGATGTTATAGTTAGATATATTTATGGTGCTAGATCTTGTGAAATCCTCATTCAAGTTTTTACAAAATGATTCCCTGGTTTTACTTGGACGACATTTATTGCATTAACATAATTTTTTAAGTTAATTTCTGCAATACATCTTTTTGGACCGATTTTTGTTCTTTAAAAAAACATTGGATGTTATACATCTGACGGCTAAACACTGTAACTGCAGGTACAAGTTTGGTTTCTGTCCAAATGGTTCTGATTGTCGATATAGGCACGCAAAGCTGCCTGGACCTCCACCTCCAGTGGAAGAAATCCTTCAGAAAGTACAGCAATTAGGTTCATACAATTATGGTTCCTCAAACAAATTCTTTTCACAACGTGGAGTTGGCTTATCCCAACAGAATGAAAAATCTCAGATTCCTCAGGGTCCGGCCCCTGTTACTCAAGGAGTTTTAGGAAACCCTTCTGCAGCAGAATCTGCTGATGTCCAACAGCCGCAAGCTCAACAGACTGCACAACAAACCAGCCAGACTCAGACACAAGGTCTTTCAAATGGCCAGCCCAATCAACTAAACACAACTGCAACGTCTTTGCCTCCAGGAATATCTAGGTGTGTCTGATGCGACCTGAAGTCTTTTTGCATATTACTTCAACTCAGTTTTTGTATCATATGGAAACAGTGTTGCAGCGATTTGTTATTTAACTTCAGCACTATCATATTTGTGATTTTGTTTGGTTACTTTAAGCCGCAGTAGTCAACATTGTTTTTCTTCCTATTAATTTGTAGTCCTTGTACCACAAGAATCTTTAGTTAGAATGGGATTCCAACTTAGTACCTTTTAAAATTTTGAGAAGAATTGCTCCTTTGGTGAGCACAATACGAGCTGCCTTTCGGCTTGGTGAAGGGTATCATTTTTTTTTTCCCTCAATATCAGAAAACTTGCTTTCATTGGGAAGAAACGCAAGAATATAGAAGGGCATGGATGGTATCATCCTAAGGTATTAATTATTTTACCAGTTCTGTATCAAGCTATTGAATTCTATGCCTAAGCTTCATTACCATGTGCTCATGTTCCATTTCAATTCATCTCATGTCAATTGCTAAGTGTCAAGAAACTACTTTCCCCAACACTTTGTTGGTTCTGTTATTGATTGGCTAGAATCTATTGGCTCATAGCTCATACTCTGTTATGTTAGGGTCTCATTAAATCTGTGGATTGACACTTCTTGCAGACCTTTTTGATTTAGTTTGCAAATACTTGAAGTTTATGTAGTCTCTCCAGCTTATAATTATACCCCCTTTGTAATTTATGCTAGGTAGAGTTGTTTTCTGTAGAACTTTATCAAGGGGGATACCCTATTTTGGTTCTGTAACCTTTTCCATTCATCTTCTGATAAAGACAAGTGGTTACCCATTCTTAATATAATTTTGCAAAAAGAAAAAAGCTCAGACTCTTACATGACCTTTTAAATACTCTGAATGTCCTAATTTATTTTTGAAAAATTAGGTACTTTATTGTTAAAAGTTGCAACCGCGAGAATTTGGAATTATCTGTACAACAAGGGGTATGGGCAACTCAAAGAAGCAATGAAGCCAAACTTAATGAAGCTTTTGATTCTGCTGATAACGTTATTTTGATTTTCTCAGTCAATCGGACTCGGCATTTTCAGGTGCTAATCATTCACATTGTGTTTGTGTATGACACTACTTGGTCATTGAGGATCGATGTGTGTTTGTTTGAGATAATCATACTGATTTAGCAATGGCTGCTTAGGGTTGTGCAAAGATGATGACCAGAATTGGTGGATCTGTCAGTGGAGGCAATTGGAAATATGCACATGGAACTGCACATTATGGGCAAAACTTTTCACTCAAATGGCTGAAGGTTTCATTTTTTTAGATCTATAGTTTTATGCAGAAAGTATTGTCTGTATTTTCTATGATACCTGGAAGCTAGCTAAAATCTGAATTTGACAAATGCATGATAAAGCTTAGAGGTCAAACTATATTATATTGTGAAGGATGATTTTGTTGCTGTCGATTTGAGTCCTGTATGATGCGATGAATAATTTTGACTTTGTTACTGTCGATTTGAGTCCTGTATGATGCGATGAATAATTTTGACTTTGTTACTTGCAGTTATGTGAACTATCCTTCCAGAAAACTCGTCATTTGAGGAATCCATATAATGAAAACTTACCAGTAAAGGTATAGAATCCCGAGCTTGATGAAGAAAGATTTCTATTTATATTTACATCTGCAGATGTTTTTGGATGCTTCTACTTTCACTTGTGTTGTGAACTCTTGAAAATATGTCCCACTTCTTTTATTTCTTATGTTTATTATTATTATATTGTTCTCCACTTTCTGGTGATAATAGATATTACTGGTTTTCTTGAAATCAAATTATCTGAGCATTCTTAAGAACTTGCAATCTTTTGGATGAAAGTTTATTCTTCTTTATTTTTTTCCCCTTGTGGGGGATCTGGGAGCTTTCTCTAGGATTTAGTTTCAAGGAAGTTACTAGAAGTGACACTCTGCCTCATGTAGACCATGCGATCTTTATTTTACTTAATCTTACAGGAATCATTTAGCAGAGAGGGCTAACATGATTGATACAATCATGAGGGATGGAAAATCCTGATTGTCCTCGCTCTTTAACTTGAGAGCATGAATTTTGTCAAGAATTTGAGAAAATCACAGTAGGCAGCAGTAGACTAACATTAGACTGTCAGAACCATTGCAAGTAATGCAAGCTTCATTTTCCTGCTAAAATAACCACCATTTCGTGAATTCTTTCCTTGACTGCAATTAAAAACTTTGGCGCAAACATAATAGACTTAAATAAAGGCTTGAATCCAACAAAAACATGAAATGATTCCAATGGAATCTTGAACATGTATGCTGATCAGTTCAGAATGCAGAACAGCAGCCGTAATTCTAGTGGTGCACTGTTCCTCCGCTCATCATCCTTGTTCACTAGTCTTTGTTTTGTTTCTAAGTTACTGTGTTGCTTGTTTTACTGTATCCTCTGTTAGTTTTACTGCGCTTCTGTTAATCCTAGTTCTTCTTTGGGTAGGTAAGTTTGTTGTTCTAAGGCTGGTTTGTAGCCTTTAAATAGTTGGTTCAATGTTGTTATCAAAAGACATTTTTGTAAAGAATACTTCGAGGTTTCTCCAAGAGCAGTGTTGCACTATTCAGATTGCTAATGTTGCCGGGCAGAGTTTAGCATCGCGTTTATCTTGTAATATCTGTTTAATTGGCACCCTGTTTCTGCTCATTGCTTTGATTTGTTTCCTGTCGACCATCCATGTTCGTGGAGAATAGTTGTTTGAAGAAGATATTTTTTTTACTTCATATCCTGTTCTGCAGTCAGTGGTAGCATTGGATACTAATTGAGCCATCATTTTTCTCGTACTCTTACAAGTGTAGATCAGTAGAGATTGCCAAGAGCTAGAGCCCTCTATTGGTGAGCAGCTGGCTTCTTTGCTTTATCTTGAGCCAGATGGTGAACTGATGGTATGCTTTGAAAATTTTGAAATACATTCCCCTGACAAAATAAGGATTACATATGCAAGCAAGCGAGGAAGAAGATGAAATTTGAGGAAGTGATAATGGCAGTTTCAGAATTTAGCTCTAGATGAATTTCCTTAGTTTATTTTTGTTACTTTTGTGATCAGGCCGTCTCAGTAGCAGCAGAATTGAAACGAGAAGAGGAGAAAGCAAGGGGAGTTAATCCTGGCAGTGGAAGTGAGAACCCAGATATTGTCCCGTTCGAGGATAACGAAGAAGAGGAAGAGGAAGACAGTGAAGAGGAGGAGGAGGAGGAGGAGAGCCTTGGCCAGTCCGTTGGTTTACCAGCTCAGGGCAGAGGAAGGGGCAGGGGAATCATGTGGCCTCCACATATGCCAATGGGACGTGGTCCTAGACCCTTTCATGGAATGCCGGGTTTTCCACCTGGGATGATGGGTCCGGATGGGCTGCCTTATGGTCCTGTTACACCTGACGGATTTCCCATGCCTGACATGTTTGGAATGGCTCCTCGTGGCTTTGGTCCATACGGTCCTAGGTTTCCCGGTGATTTTATGAATCCCCCAGCTGCTATGATGTTCCGTGGACGACCTTCTCAACCTGGGGTCATGTTCCCTCCTGGTGGATTTGGGATGATGATGGGTCAAGGACGTGGTCCCTTTATGGGTGGGATGGGGGTTCCTGGTCCTAACCCAGCTCGACCTGGTCGTCCTATGGGCGTGTCTCCGTTGTATCCACCTCCTGCATTACCGTCATCTCAAAACATCAATCGAGCTGCTAAGAGGGACCAAAGGGGAGGACCGGGTAGTGATCGGAATGATAGATATATTACAGGTCCAGACCAAAACAAGGGCCAGGAGATGCCTAGACATGATGAAGAAATGCAATATAAGCAGTCAAAAACTTATCCTGATGAGCAATATGGGCTAGGAACCACCTCTAGGAATGAAGAAAGTGAAAGTGAGGACGAGGCACCTCGACGATCGAGGCATGGAGAAGGGAAGAAGAAGCGGAGAGGCTCGGAAGGAGGAGATGCAACTGCAATCTCTGATCAGTAA

mRNA sequence

ATGGAGGATTCCGAGGGCGTTCTCAGCTTCGATTTCGAGGGCGGCCTCGATGCCGGCCCCACTAACCCCGCCGCCACCTCCTCCTTGCCCATAATCCAGTCAGATTCTTCTTCCTTCCCCGCCGCTTCCGCCGTCTCCAACTCCGTTGCCGGCGCCGTCGGTCCTGCTGCTACAGCTGATGCTCCTGGCGCTCCAACCGGCAACGTCGGGAATCGGAGGAGCTTCCGGCAAACGGTTTGCCGGCATTGGCTTCGAAGCCTCTGTATGAAGGGCGACGCCTGTGGCTTCCTTCACCAGTATGATAAGTCTCGGATGCCCATTTGCCGATTCTTCCGTCTCTATGGCGAGTGCCGTGAGCAGGATTGCGTGTACAAACATACCAATGAAGATATTAAGGAGTGTAATATGTACAAGTTTGGTTTCTGTCCAAATGGTTCTGATTGTCGATATAGGCACGCAAAGCTGCCTGGACCTCCACCTCCAGTGGAAGAAATCCTTCAGAAAGTACAGCAATTAGGTTCATACAATTATGGTTCCTCAAACAAATTCTTTTCACAACGTGGAGTTGGCTTATCCCAACAGAATGAAAAATCTCAGATTCCTCAGGGTCCGGCCCCTGTTACTCAAGGAGTTTTAGGAAACCCTTCTGCAGCAGAATCTGCTGATGTCCAACAGCCGCAAGCTCAACAGACTGCACAACAAACCAGCCAGACTCAGACACAAGGTCTTTCAAATGGCCAGCCCAATCAACTAAACACAACTGCAACGTCTTTGCCTCCAGGAATATCTAGGTACTTTATTGTTAAAAGTTGCAACCGCGAGAATTTGGAATTATCTGTACAACAAGGGGTATGGGCAACTCAAAGAAGCAATGAAGCCAAACTTAATGAAGCTTTTGATTCTGCTGATAACGTTATTTTGATTTTCTCAGTCAATCGGACTCGGCATTTTCAGGGTTGTGCAAAGATGATGACCAGAATTGGTGGATCTGTCAGTGGAGGCAATTGGAAATATGCACATGGAACTGCACATTATGGGCAAAACTTTTCACTCAAATGGCTGAAGTTATGTGAACTATCCTTCCAGAAAACTCGTCATTTGAGGAATCCATATAATGAAAACTTACCAGTAAAGATCAGTAGAGATTGCCAAGAGCTAGAGCCCTCTATTGGTGAGCAGCTGGCTTCTTTGCTTTATCTTGAGCCAGATGGTGAACTGATGGCCGTCTCAGTAGCAGCAGAATTGAAACGAGAAGAGGAGAAAGCAAGGGGAGTTAATCCTGGCAGTGGAAGTGAGAACCCAGATATTGTCCCGTTCGAGGATAACGAAGAAGAGGAAGAGGAAGACAGTGAAGAGGAGGAGGAGGAGGAGGAGAGCCTTGGCCAGTCCGTTGGTTTACCAGCTCAGGGCAGAGGAAGGGGCAGGGGAATCATGTGGCCTCCACATATGCCAATGGGACGTGGTCCTAGACCCTTTCATGGAATGCCGGGTTTTCCACCTGGGATGATGGGTCCGGATGGGCTGCCTTATGGTCCTGTTACACCTGACGGATTTCCCATGCCTGACATGTTTGGAATGGCTCCTCGTGGCTTTGGTCCATACGGTCCTAGGTTTCCCGGTGATTTTATGAATCCCCCAGCTGCTATGATGTTCCGTGGACGACCTTCTCAACCTGGGGTCATGTTCCCTCCTGGTGGATTTGGGATGATGATGGGTCAAGGACGTGGTCCCTTTATGGGTGGGATGGGGGTTCCTGGTCCTAACCCAGCTCGACCTGGTCGTCCTATGGGCGTGTCTCCGTTGTATCCACCTCCTGCATTACCGTCATCTCAAAACATCAATCGAGCTGCTAAGAGGGACCAAAGGGGAGGACCGGGTAGTGATCGGAATGATAGATATATTACAGGTCCAGACCAAAACAAGGGCCAGGAGATGCCTAGACATGATGAAGAAATGCAATATAAGCAGTCAAAAACTTATCCTGATGAGCAATATGGGCTAGGAACCACCTCTAGGAATGAAGAAAGTGAAAGTGAGGACGAGGCACCTCGACGATCGAGGCATGGAGAAGGGAAGAAGAAGCGGAGAGGCTCGGAAGGAGGAGATGCAACTGCAATCTCTGATCAGTAA

Coding sequence (CDS)

ATGGAGGATTCCGAGGGCGTTCTCAGCTTCGATTTCGAGGGCGGCCTCGATGCCGGCCCCACTAACCCCGCCGCCACCTCCTCCTTGCCCATAATCCAGTCAGATTCTTCTTCCTTCCCCGCCGCTTCCGCCGTCTCCAACTCCGTTGCCGGCGCCGTCGGTCCTGCTGCTACAGCTGATGCTCCTGGCGCTCCAACCGGCAACGTCGGGAATCGGAGGAGCTTCCGGCAAACGGTTTGCCGGCATTGGCTTCGAAGCCTCTGTATGAAGGGCGACGCCTGTGGCTTCCTTCACCAGTATGATAAGTCTCGGATGCCCATTTGCCGATTCTTCCGTCTCTATGGCGAGTGCCGTGAGCAGGATTGCGTGTACAAACATACCAATGAAGATATTAAGGAGTGTAATATGTACAAGTTTGGTTTCTGTCCAAATGGTTCTGATTGTCGATATAGGCACGCAAAGCTGCCTGGACCTCCACCTCCAGTGGAAGAAATCCTTCAGAAAGTACAGCAATTAGGTTCATACAATTATGGTTCCTCAAACAAATTCTTTTCACAACGTGGAGTTGGCTTATCCCAACAGAATGAAAAATCTCAGATTCCTCAGGGTCCGGCCCCTGTTACTCAAGGAGTTTTAGGAAACCCTTCTGCAGCAGAATCTGCTGATGTCCAACAGCCGCAAGCTCAACAGACTGCACAACAAACCAGCCAGACTCAGACACAAGGTCTTTCAAATGGCCAGCCCAATCAACTAAACACAACTGCAACGTCTTTGCCTCCAGGAATATCTAGGTACTTTATTGTTAAAAGTTGCAACCGCGAGAATTTGGAATTATCTGTACAACAAGGGGTATGGGCAACTCAAAGAAGCAATGAAGCCAAACTTAATGAAGCTTTTGATTCTGCTGATAACGTTATTTTGATTTTCTCAGTCAATCGGACTCGGCATTTTCAGGGTTGTGCAAAGATGATGACCAGAATTGGTGGATCTGTCAGTGGAGGCAATTGGAAATATGCACATGGAACTGCACATTATGGGCAAAACTTTTCACTCAAATGGCTGAAGTTATGTGAACTATCCTTCCAGAAAACTCGTCATTTGAGGAATCCATATAATGAAAACTTACCAGTAAAGATCAGTAGAGATTGCCAAGAGCTAGAGCCCTCTATTGGTGAGCAGCTGGCTTCTTTGCTTTATCTTGAGCCAGATGGTGAACTGATGGCCGTCTCAGTAGCAGCAGAATTGAAACGAGAAGAGGAGAAAGCAAGGGGAGTTAATCCTGGCAGTGGAAGTGAGAACCCAGATATTGTCCCGTTCGAGGATAACGAAGAAGAGGAAGAGGAAGACAGTGAAGAGGAGGAGGAGGAGGAGGAGAGCCTTGGCCAGTCCGTTGGTTTACCAGCTCAGGGCAGAGGAAGGGGCAGGGGAATCATGTGGCCTCCACATATGCCAATGGGACGTGGTCCTAGACCCTTTCATGGAATGCCGGGTTTTCCACCTGGGATGATGGGTCCGGATGGGCTGCCTTATGGTCCTGTTACACCTGACGGATTTCCCATGCCTGACATGTTTGGAATGGCTCCTCGTGGCTTTGGTCCATACGGTCCTAGGTTTCCCGGTGATTTTATGAATCCCCCAGCTGCTATGATGTTCCGTGGACGACCTTCTCAACCTGGGGTCATGTTCCCTCCTGGTGGATTTGGGATGATGATGGGTCAAGGACGTGGTCCCTTTATGGGTGGGATGGGGGTTCCTGGTCCTAACCCAGCTCGACCTGGTCGTCCTATGGGCGTGTCTCCGTTGTATCCACCTCCTGCATTACCGTCATCTCAAAACATCAATCGAGCTGCTAAGAGGGACCAAAGGGGAGGACCGGGTAGTGATCGGAATGATAGATATATTACAGGTCCAGACCAAAACAAGGGCCAGGAGATGCCTAGACATGATGAAGAAATGCAATATAAGCAGTCAAAAACTTATCCTGATGAGCAATATGGGCTAGGAACCACCTCTAGGAATGAAGAAAGTGAAAGTGAGGACGAGGCACCTCGACGATCGAGGCATGGAGAAGGGAAGAAGAAGCGGAGAGGCTCGGAAGGAGGAGATGCAACTGCAATCTCTGATCAGTAA

Protein sequence

MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATADAPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSSNKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQTQGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEEKARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWPPHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPGDFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSPLYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTYPDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ

Homology

[Close]

BLAST of Carg21393 vs. NCBI nr
Match: KAG6583855.1 (30-kDa cleavage and polyadenylation specificity factor 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019478.1 30-kDa cleavage and polyadenylation specificity factor 30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1408.7 bits (3645), Expect = 0.0e+00
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT
Sbjct: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG
Sbjct: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP
Sbjct: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660
           LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY
Sbjct: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660

Query: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ
Sbjct: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 709

[Close]

BLAST of Carg21393 vs. NCBI nr
Match: XP_023520093.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1391.7 bits (3601), Expect = 0.0e+00
Identity = 701/709 (98.87%), Postives = 705/709 (99.44%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSS  PAASAVSNSVAGAVGPAATAD
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSFLPAASAVSNSVAGAVGPAATAD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQK+QQLGSYNYGSS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKIQQLGSYNYGSS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT
Sbjct: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KARGVNPG GSENPDIVPFEDNEEEEEEDS EEEEEEESLGQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KARGVNPGIGSENPDIVPFEDNEEEEEEDS-EEEEEEESLGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDG+PMPDMFGMAPRGFGPYGPRFPG
Sbjct: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGYPMPDMFGMAPRGFGPYGPRFPG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP
Sbjct: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660
           LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQE+PRHDEEMQYKQSKTY
Sbjct: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEIPRHDEEMQYKQSKTY 660

Query: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISD+
Sbjct: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDE 708

[Close]

BLAST of Carg21393 vs. NCBI nr
Match: XP_022927141.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Cucurbita moschata])

HSP 1 Score: 1387.1 bits (3589), Expect = 0.0e+00
Identity = 703/709 (99.15%), Postives = 704/709 (99.29%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASA  NSVAGAVGPAATAD
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASA--NSVAGAVGPAATAD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQK+QQLGSYNYGSS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKIQQLGSYNYGSS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRGVGLSQQNEKSQIPQG APVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT
Sbjct: 181 NKFFSQRGVGLSQQNEKSQIPQGLAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELE SIGEQLASLLYLEPDGELMAVSVAAELKREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELELSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KARGVNPGSGSENPDIVPFEDNEEEEEEDS EEEEEEESLGQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDS-EEEEEEESLGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG
Sbjct: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP
Sbjct: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660
           LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY
Sbjct: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660

Query: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ
Sbjct: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 706

[Close]

BLAST of Carg21393 vs. NCBI nr
Match: XP_023001070.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Cucurbita maxima])

HSP 1 Score: 1382.9 bits (3578), Expect = 0.0e+00
Identity = 698/709 (98.45%), Postives = 702/709 (99.01%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSS  PAASAVSNSV GAVGPA TAD
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSFLPAASAVSNSVVGAVGPAVTAD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQK+QQLGSYNYGSS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKIQQLGSYNYGSS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT
Sbjct: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KARGVNPGSGSENPDIVPFEDNEEEEEEDS EEEEEEESLGQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDS-EEEEEEESLGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG
Sbjct: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFM+PPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP
Sbjct: 541 DFMSPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660
           LYPPPALPSSQNINRA KRDQR GPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQ+KTY
Sbjct: 601 LYPPPALPSSQNINRAVKRDQR-GPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQAKTY 660

Query: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           PDEQYG+GTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ
Sbjct: 661 PDEQYGIGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 707

[Close]

BLAST of Carg21393 vs. NCBI nr
Match: XP_022140120.1 (30-kDa cleavage and polyadenylation specificity factor 30 [Momordica charantia])

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 632/712 (88.76%), Postives = 655/712 (91.99%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MED EGVLSFDFEGGLDAGPTNPAAT SLP+IQSD S+ PAASAVS+S  GAVG A T +
Sbjct: 1   MEDPEGVLSFDFEGGLDAGPTNPAAT-SLPLIQSDPSAPPAASAVSSSGPGAVGHAVTVE 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           A GA TGNVG+RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  AGGAVTGNVGSRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNG DCRYRHAKLPGPPPPVEEILQK+Q L SYNYG S
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLSSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRG GLS Q EK Q PQGPA V QGV+G PS AESA+VQQPQAQQ+AQQTSQTQ 
Sbjct: 181 NKFFSQRGAGLSHQIEKPQFPQGPATVNQGVVGKPSTAESANVQQPQAQQSAQQTSQTQI 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q LSNGQPNQLN TATSLP GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QSLSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMM+RIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAE KREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KA+GVNP  GSENPDIVPFEDNEEEEEE+S  EEEEEES GQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KAKGVNPDIGSENPDIVPFEDNEEEEEEES--EEEEEESFGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRG RPFHGM GFPPGMMGPDGL YGPVTPDGFPMPD+FGMAPRGFGPYGPRF G
Sbjct: 481 PHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFM PP+AMMFRGRPSQPG MFPPGGFGMMMGQGRGPFMGGMGV G NPARPGRP+ VS 
Sbjct: 541 DFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRGPFMGGMGVTGANPARPGRPVSVSQ 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMP--RHDEEMQYKQ-S 660
           LYPPPA+P SQN+NR  KRDQR GPG+DRNDRYI GPDQ+KGQEMP   HD+EMQYKQ S
Sbjct: 601 LYPPPAVPPSQNMNRVVKRDQR-GPGNDRNDRYIAGPDQSKGQEMPGSGHDDEMQYKQGS 660

Query: 661 KTYPDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           K YPDEQYG+GTT RNEESESEDEAPRRSRHGEGKKKRRGSE GDAT +SDQ
Sbjct: 661 KAYPDEQYGIGTTFRNEESESEDEAPRRSRHGEGKKKRRGSE-GDATVVSDQ 707

[Close]

BLAST of Carg21393 vs. ExPASy Swiss-Prot
Match: A9LNK9 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana OX=3702 GN=CPSF30 PE=1 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 5.2e-221
Identity = 442/701 (63.05%), Postives = 497/701 (70.90%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MED++G LSFDFEGGLD+GP     T+S+P+   ++SS           + AV  A T D
Sbjct: 1   MEDADG-LSFDFEGGLDSGPVQ--NTASVPVAPPENSS-----------SAAVNVAPTYD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
              A     G  RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMPICRFFRLYGECREQ
Sbjct: 61  HSSATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYK GFCPNG DCRYRHAKLPGPPPPVEE+LQK+QQL +YNYG +
Sbjct: 121 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYG-T 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           N+ +  R V    Q+     PQG  P+     G P   ES ++QQ Q QQ  QQ+    +
Sbjct: 181 NRLYQARNVAPQLQDR----PQGQVPMQ----GQPQ--ESGNLQQ-QQQQQPQQSQHQVS 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q L     +Q N T+  LP G++RYF+VKS NREN ELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QTLIPNPADQTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           S +NVILIFSVNRTRHFQGCAKM +RIGG + GGNWK+ HGTA YG+NFS+KWLKLCELS
Sbjct: 301 SVENVILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           F KTR+LRNPYNENLPVKISRDCQELEPS+GEQLASLLYLEPD ELMA+S+AAE KREEE
Sbjct: 361 FHKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KA+GVNP S +ENPDIVPFEDNEEEEEE+ E EEEEE   G       QGRGRGRGIMWP
Sbjct: 421 KAKGVNPESRAENPDIVPFEDNEEEEEEEDESEEEEESMAG-----GPQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGP-DGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFP 540
           P MP+GRG RP  GM GFP G+MGP D  PYGP   +G  MPD FGM PR FGPYGPRF 
Sbjct: 481 PQMPLGRGIRPMPGMGGFPLGVMGPGDAFPYGPGGYNG--MPDPFGMGPRPFGPYGPRFG 540

Query: 541 GDFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVS 600
           GDF  P   MMF GRP Q    FP GG+G MMG GRGP MGGMG    N  R GRPM   
Sbjct: 541 GDFRGPVPGMMFPGRPPQ---QFPHGGYG-MMGGGRGPHMGGMG----NAPRGGRPM--- 600

Query: 601 PLYPP---PALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQ 660
             YPP    A P   N     + D+RG          ++G  QN               Q
Sbjct: 601 -YYPPATSSARPGPSNRKTPERSDERG----------VSGDQQN---------------Q 631

Query: 661 SKTYPDEQYGLGTTSRNEESES--EDEAPRRSRHGEGKKKR 696
             ++  EQ+ +G + RNEESES  EDEAPRRSRHGEGKK+R
Sbjct: 661 DASHDMEQFEVGNSLRNEESESEDEDEAPRRSRHGEGKKRR 631

[Close]

BLAST of Carg21393 vs. ExPASy Swiss-Prot
Match: Q0DA50 (Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0677700 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 1.1e-197
Identity = 404/709 (56.98%), Postives = 480/709 (67.70%), Query Frame = 0


Query: 5   EGVLSFDFEGGLDAGPT----NPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 64
           +G LSFDFEGGLD  P      PA  SS P                  V G  G     D
Sbjct: 3   DGDLSFDFEGGLDQPPAGGGGGPAPHSSDP----------------GGVGGGGGGGGPGD 62

Query: 65  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 124
             G   G    R S+RQTVCRHWLR LCMKG+ACGFLHQ+DK+RMP+CRFFR +GECRE 
Sbjct: 63  GGGHGRGR--GRGSYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREP 122

Query: 125 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 184
           DC YKH+ +D+KECNMYK GFCPNG +CRY+H KLPGPPPPVEE+LQK+ Q+ S+     
Sbjct: 123 DCAYKHSYDDVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSF----- 182

Query: 185 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSA----------AESADVQQPQAQQ 244
           NKF   R    +QQ E+ Q PQG     Q  + N +           A++ + Q PQ QQ
Sbjct: 183 NKFNQHRHNNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQ 242

Query: 245 TAQQTSQ--------TQTQGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQ 304
             QQ  Q         Q Q + NG  NQ    AT LP G SRYFIVKSCNRENLE+SVQQ
Sbjct: 243 QQQQQQQQQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSRYFIVKSCNRENLEISVQQ 302

Query: 305 GVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGT 364
           G+WATQRSNEAKLNEAF+S +NVILIFS+NRTR+FQGCAKM +RIGG + GGNWK AHGT
Sbjct: 303 GIWATQRSNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSAHGT 362

Query: 365 AHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEP 424
           AHYG+NFS++WLKLCELSFQKT HLRNPYN+NLPVKISRDCQELEP IGEQLASLLYLEP
Sbjct: 363 AHYGRNFSIQWLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEP 422

Query: 425 DGELMAVSVAAELKREEEKARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQ 484
           D EL A+ +AAE K+EEEKA+GV+    ++N DIV F+DNEEEEEE+SEEEEE       
Sbjct: 423 DSELTAILIAAEAKKEEEKAKGVSADEAADNQDIVLFDDNEEEEEEESEEEEEGN----- 482

Query: 485 SVGLPAQGRGRGRGIMWPPHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPD 544
             G  +QGRGRGRG+MWPP MPM RG  P  G  GFPP M+G DG  +G     GF MPD
Sbjct: 483 --GQESQGRGRGRGMMWPPQMPMLRGVGPMMGGRGFPPNMIG-DGFGFG----GGFGMPD 542

Query: 545 MFGMAPRGFGPYGPRFPGDFM--NPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMG 604
            FG+ PRGF P+GPRFPGDF    P   M+F GRP QPG MFP  G  MMMG GRGP MG
Sbjct: 543 PFGV-PRGFPPFGPRFPGDFARGGPMPGMVFPGRPPQPGGMFPM-GLEMMMGPGRGPLMG 602

Query: 605 GMGVPGPNPARPGRPMGVSPLYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQ- 664
           G+G+ G  P RP RP+G++P  PPP  P+    NR  KR+QR  PG +R DRY T  DQ 
Sbjct: 603 GLGMGG--PGRPNRPVGMAPFMPPPPPPN----NRGTKREQR-RPGGERGDRYETTSDQG 662

Query: 665 NKGQEMPRHDEEMQYKQSKTYPDEQYGLGTTSRNEESESEDE-APRRSR 688
           ++G +   +      + +++   ++YG  +  R+++SES++E APRRSR
Sbjct: 663 SRGHDATGNSGA---EGARSQSGDRYG-RSALRDDDSESDEEAAPRRSR 663

[Close]

BLAST of Carg21393 vs. ExPASy Swiss-Prot
Match: B2RR83 (3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.3e-27
Identity = 69/142 (48.59%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 264  RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKM 323
            RYFI+KS N  NLE+S Q+G+W+T  SNE KLN AF  +  V L+FSV  + HFQG ++M
Sbjct: 1304 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1363

Query: 324  MTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKISRDC 383
             + IG   S  +W    G+A  G  F ++W++   L FQ   HL NP+N+N  V+ISRD 
Sbjct: 1364 SSEIGREKS-QDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1423

Query: 384  QELEPSIGEQLASLLYLEPDGE 406
            QELEP +GEQL  L    P GE
Sbjct: 1424 QELEPQVGEQLLQLWERLPLGE 1440

[Close]

BLAST of Carg21393 vs. ExPASy Swiss-Prot
Match: Q5R746 (3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 2.3e-27
Identity = 69/142 (48.59%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 264  RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKM 323
            RYFI+KS N  NLE+S Q+G+W+T  SNE KLN AF  +  V L+FSV  + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1348

Query: 324  MTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKISRDC 383
             + IG   S  +W    G+A  G  F ++W++   L FQ   HL NP+N+N  V+ISRD 
Sbjct: 1349 SSEIGREKS-QDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1408

Query: 384  QELEPSIGEQLASLLYLEPDGE 406
            QELEP +GEQL  L    P GE
Sbjct: 1409 QELEPQVGEQLLQLWERLPLGE 1425

[Close]

BLAST of Carg21393 vs. ExPASy Swiss-Prot
Match: Q9H6S0 (3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-27
Identity = 69/142 (48.59%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 264  RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKM 323
            RYFI+KS N  NLE+S Q+G+W+T  SNE KLN AF  +  V L+FSV  + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 1348

Query: 324  MTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKISRDC 383
             + IG   S  +W    G+A  G  F ++W++   L FQ   HL NP+N+N  V+ISRD 
Sbjct: 1349 SSEIGREKS-QDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1408

Query: 384  QELEPSIGEQLASLLYLEPDGE 406
            QELEP +GEQL  L    P GE
Sbjct: 1409 QELEPLVGEQLLQLWERLPLGE 1425

[Close]

BLAST of Carg21393 vs. ExPASy TrEMBL
Match: A0A6J1EGV5 (30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucurbita moschata OX=3662 GN=LOC111434076 PE=4 SV=1)

HSP 1 Score: 1387.1 bits (3589), Expect = 0.0e+00
Identity = 703/709 (99.15%), Postives = 704/709 (99.29%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASA  NSVAGAVGPAATAD
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASA--NSVAGAVGPAATAD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQK+QQLGSYNYGSS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKIQQLGSYNYGSS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRGVGLSQQNEKSQIPQG APVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT
Sbjct: 181 NKFFSQRGVGLSQQNEKSQIPQGLAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELE SIGEQLASLLYLEPDGELMAVSVAAELKREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELELSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KARGVNPGSGSENPDIVPFEDNEEEEEEDS EEEEEEESLGQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDS-EEEEEEESLGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG
Sbjct: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP
Sbjct: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660
           LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY
Sbjct: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660

Query: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ
Sbjct: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 706

[Close]

BLAST of Carg21393 vs. ExPASy TrEMBL
Match: A0A6J1KK22 (30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucurbita maxima OX=3661 GN=LOC111495324 PE=4 SV=1)

HSP 1 Score: 1382.9 bits (3578), Expect = 0.0e+00
Identity = 698/709 (98.45%), Postives = 702/709 (99.01%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSS  PAASAVSNSV GAVGPA TAD
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSFLPAASAVSNSVVGAVGPAVTAD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQK+QQLGSYNYGSS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKIQQLGSYNYGSS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT
Sbjct: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KARGVNPGSGSENPDIVPFEDNEEEEEEDS EEEEEEESLGQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDS-EEEEEEESLGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG
Sbjct: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFM+PPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP
Sbjct: 541 DFMSPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQSKTY 660
           LYPPPALPSSQNINRA KRDQR GPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQ+KTY
Sbjct: 601 LYPPPALPSSQNINRAVKRDQR-GPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQAKTY 660

Query: 661 PDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           PDEQYG+GTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ
Sbjct: 661 PDEQYGIGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 707

[Close]

BLAST of Carg21393 vs. ExPASy TrEMBL
Match: A0A6J1CE78 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Momordica charantia OX=3673 GN=LOC111010855 PE=4 SV=1)

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 632/712 (88.76%), Postives = 655/712 (91.99%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MED EGVLSFDFEGGLDAGPTNPAAT SLP+IQSD S+ PAASAVS+S  GAVG A T +
Sbjct: 1   MEDPEGVLSFDFEGGLDAGPTNPAAT-SLPLIQSDPSAPPAASAVSSSGPGAVGHAVTVE 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           A GA TGNVG+RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  AGGAVTGNVGSRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYKFGFCPNG DCRYRHAKLPGPPPPVEEILQK+Q L SYNYG S
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLSSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           NKFFSQRG GLS Q EK Q PQGPA V QGV+G PS AESA+VQQPQAQQ+AQQTSQTQ 
Sbjct: 181 NKFFSQRGAGLSHQIEKPQFPQGPATVNQGVVGKPSTAESANVQQPQAQQSAQQTSQTQI 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q LSNGQPNQLN TATSLP GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QSLSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMM+RIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAE KREEE
Sbjct: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KA+GVNP  GSENPDIVPFEDNEEEEEE+S  EEEEEES GQSVGLPAQGRGRGRGIMWP
Sbjct: 421 KAKGVNPDIGSENPDIVPFEDNEEEEEEES--EEEEEESFGQSVGLPAQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFPG 540
           PHMPMGRG RPFHGM GFPPGMMGPDGL YGPVTPDGFPMPD+FGMAPRGFGPYGPRF G
Sbjct: 481 PHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSG 540

Query: 541 DFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVSP 600
           DFM PP+AMMFRGRPSQPG MFPPGGFGMMMGQGRGPFMGGMGV G NPARPGRP+ VS 
Sbjct: 541 DFMGPPSAMMFRGRPSQPGAMFPPGGFGMMMGQGRGPFMGGMGVTGANPARPGRPVSVSQ 600

Query: 601 LYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMP--RHDEEMQYKQ-S 660
           LYPPPA+P SQN+NR  KRDQR GPG+DRNDRYI GPDQ+KGQEMP   HD+EMQYKQ S
Sbjct: 601 LYPPPAVPPSQNMNRVVKRDQR-GPGNDRNDRYIAGPDQSKGQEMPGSGHDDEMQYKQGS 660

Query: 661 KTYPDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           K YPDEQYG+GTT RNEESESEDEAPRRSRHGEGKKKRRGSE GDAT +SDQ
Sbjct: 661 KAYPDEQYGIGTTFRNEESESEDEAPRRSRHGEGKKKRRGSE-GDATVVSDQ 707

[Close]

BLAST of Carg21393 vs. ExPASy TrEMBL
Match: A0A5D3C2W1 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00560 PE=4 SV=1)

HSP 1 Score: 1217.6 bits (3149), Expect = 0.0e+00
Identity = 629/717 (87.73%), Postives = 653/717 (91.07%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAA-----TSSLPIIQSDSSSFPAASAVSNSVAGAVGP 60
           MEDSEGVLSFDFEGGLDA PTNPAA     +SSLP+I SDSS+ P    +SNS+ G++GP
Sbjct: 1   MEDSEGVLSFDFEGGLDAAPTNPAAAAAASSSSLPLIPSDSSAPP---PLSNSLPGSLGP 60

Query: 61  AATADAPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG 120
               +  GAPT NVG RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG
Sbjct: 61  TLAPEPLGAPTANVGTRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG 120

Query: 121 ECREQDCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSY 180
           ECREQDCVYKHTNEDIKECNMYKFGFCPNG DCRYRHAKLPGPPP VEEILQK+Q LGSY
Sbjct: 121 ECREQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPSVEEILQKIQHLGSY 180

Query: 181 NYGSSNKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQT 240
           NYGSSNKFFSQRGVGL QQNEKSQ PQGPAPVTQGV+G PS AESA+VQQ Q QQ AQQT
Sbjct: 181 NYGSSNKFFSQRGVGLPQQNEKSQFPQGPAPVTQGVIGKPSTAESANVQQQQVQQPAQQT 240

Query: 241 SQTQTQGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 300
           SQTQ Q +SNGQPNQLN TATSLP GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL
Sbjct: 241 SQTQIQSVSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 300

Query: 301 NEAFDSADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLK 360
           NEAFDSADNVILIFSVNRTRHFQGCAKMM+RIGGSVSGGNWKYAHGTAHYGQNFSLKWLK
Sbjct: 301 NEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLK 360

Query: 361 LCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAEL 420
           LCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAE 
Sbjct: 361 LCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSIAAES 420

Query: 421 KREEEKARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGR 480
           KREEEKA+GVNP  G+ENPDIVPFEDNEEEEEE+S  EEEEEES GQSVGLPAQGRGRGR
Sbjct: 421 KREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEES--EEEEEESFGQSVGLPAQGRGRGR 480

Query: 481 GIMWPPHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYG 540
           GIMWPPHMPMGRG RPFHGM  FPPGMMGPDGL YGPVTPDGFPMPD+FGMAPRGFGPYG
Sbjct: 481 GIMWPPHMPMGRGARPFHGMQSFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYG 540

Query: 541 PRFPGDFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRP 600
           PRF GDFM PP+AMMFRGRPSQPG MF PGGFGMMMGQGRGPFMGGMGV G +PARPGRP
Sbjct: 541 PRFSGDFMGPPSAMMFRGRPSQPGAMFTPGGFGMMMGQGRGPFMGGMGVTGTSPARPGRP 600

Query: 601 MGVSPLYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEM--PRHDEEMQ 660
           +GVSPLYPPPA+PS+QNINRA KRDQR GP SDRNDRYI GPDQNKGQEM    HDE MQ
Sbjct: 601 VGVSPLYPPPAVPSAQNINRAIKRDQR-GPTSDRNDRYIVGPDQNKGQEMLSSGHDEGMQ 660

Query: 661 YKQ-SKTYPDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           YKQ SK YPDEQYG+GTT RNEESESEDEAPRRSRHGEGKKKRRGSE GDATAISDQ
Sbjct: 661 YKQGSKAYPDEQYGMGTTFRNEESESEDEAPRRSRHGEGKKKRRGSE-GDATAISDQ 710

[Close]

BLAST of Carg21393 vs. ExPASy TrEMBL
Match: A0A1S3BC28 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Cucumis melo OX=3656 GN=LOC103488286 PE=4 SV=1)

HSP 1 Score: 1217.6 bits (3149), Expect = 0.0e+00
Identity = 629/717 (87.73%), Postives = 653/717 (91.07%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAA-----TSSLPIIQSDSSSFPAASAVSNSVAGAVGP 60
           MEDSEGVLSFDFEGGLDA PTNPAA     +SSLP+I SDSS+ P    +SNS+ G++GP
Sbjct: 1   MEDSEGVLSFDFEGGLDAAPTNPAAAAAASSSSLPLIPSDSSAPP---PLSNSLPGSLGP 60

Query: 61  AATADAPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG 120
               +  GAPT NVG RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG
Sbjct: 61  TLAPEPLGAPTANVGTRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG 120

Query: 121 ECREQDCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSY 180
           ECREQDCVYKHTNEDIKECNMYKFGFCPNG DCRYRHAKLPGPPP VEEILQK+Q LGSY
Sbjct: 121 ECREQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPSVEEILQKIQHLGSY 180

Query: 181 NYGSSNKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQT 240
           NYGSSNKFFSQRGVGL QQNEKSQ PQGPAPVTQGV+G PS AESA+VQQ Q QQ AQQT
Sbjct: 181 NYGSSNKFFSQRGVGLPQQNEKSQFPQGPAPVTQGVIGKPSTAESANVQQQQVQQPAQQT 240

Query: 241 SQTQTQGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 300
           SQTQ Q +SNGQPNQLN TATSLP GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL
Sbjct: 241 SQTQIQSVSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 300

Query: 301 NEAFDSADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLK 360
           NEAFDSADNVILIFSVNRTRHFQGCAKMM+RIGGSVSGGNWKYAHGTAHYGQNFSLKWLK
Sbjct: 301 NEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLK 360

Query: 361 LCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAEL 420
           LCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVS+AAE 
Sbjct: 361 LCELSFQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSIAAES 420

Query: 421 KREEEKARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGR 480
           KREEEKA+GVNP  G+ENPDIVPFEDNEEEEEE+S  EEEEEES GQSVGLPAQGRGRGR
Sbjct: 421 KREEEKAKGVNPDIGNENPDIVPFEDNEEEEEEES--EEEEEESFGQSVGLPAQGRGRGR 480

Query: 481 GIMWPPHMPMGRGPRPFHGMPGFPPGMMGPDGLPYGPVTPDGFPMPDMFGMAPRGFGPYG 540
           GIMWPPHMPMGRG RPFHGM  FPPGMMGPDGL YGPVTPDGFPMPD+FGMAPRGFGPYG
Sbjct: 481 GIMWPPHMPMGRGARPFHGMQSFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYG 540

Query: 541 PRFPGDFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRP 600
           PRF GDFM PP+AMMFRGRPSQPG MF PGGFGMMMGQGRGPFMGGMGV G +PARPGRP
Sbjct: 541 PRFSGDFMGPPSAMMFRGRPSQPGAMFTPGGFGMMMGQGRGPFMGGMGVTGTSPARPGRP 600

Query: 601 MGVSPLYPPPALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEM--PRHDEEMQ 660
           +GVSPLYPPPA+PS+QNINRA KRDQR GP SDRNDRYI GPDQNKGQEM    HDE MQ
Sbjct: 601 VGVSPLYPPPAVPSAQNINRAIKRDQR-GPTSDRNDRYIVGPDQNKGQEMLSSGHDEGMQ 660

Query: 661 YKQ-SKTYPDEQYGLGTTSRNEESESEDEAPRRSRHGEGKKKRRGSEGGDATAISDQ 710
           YKQ SK YPDEQYG+GTT RNEESESEDEAPRRSRHGEGKKKRRGSE GDATAISDQ
Sbjct: 661 YKQGSKAYPDEQYGMGTTFRNEESESEDEAPRRSRHGEGKKKRRGSE-GDATAISDQ 710

[Close]

BLAST of Carg21393 vs. TAIR 10
Match: AT1G30460.1 (cleavage and polyadenylation specificity factor 30 )

HSP 1 Score: 768.8 bits (1984), Expect = 3.7e-222
Identity = 442/701 (63.05%), Postives = 497/701 (70.90%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MED++G LSFDFEGGLD+GP     T+S+P+   ++SS           + AV  A T D
Sbjct: 1   MEDADG-LSFDFEGGLDSGPVQ--NTASVPVAPPENSS-----------SAAVNVAPTYD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
              A     G  RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMPICRFFRLYGECREQ
Sbjct: 61  HSSATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYK GFCPNG DCRYRHAKLPGPPPPVEE+LQK+QQL +YNYG +
Sbjct: 121 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYG-T 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           N+ +  R V    Q+     PQG  P+     G P   ES ++QQ Q QQ  QQ+    +
Sbjct: 181 NRLYQARNVAPQLQDR----PQGQVPMQ----GQPQ--ESGNLQQ-QQQQQPQQSQHQVS 240

Query: 241 QGLSNGQPNQLNTTATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q L     +Q N T+  LP G++RYF+VKS NREN ELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QTLIPNPADQTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           S +NVILIFSVNRTRHFQGCAKM +RIGG + GGNWK+ HGTA YG+NFS+KWLKLCELS
Sbjct: 301 SVENVILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAELKREEE 420
           F KTR+LRNPYNENLPVKISRDCQELEPS+GEQLASLLYLEPD ELMA+S+AAE KREEE
Sbjct: 361 FHKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREEE 420

Query: 421 KARGVNPGSGSENPDIVPFEDNEEEEEEDSEEEEEEEESLGQSVGLPAQGRGRGRGIMWP 480
           KA+GVNP S +ENPDIVPFEDNEEEEEE+ E EEEEE   G       QGRGRGRGIMWP
Sbjct: 421 KAKGVNPESRAENPDIVPFEDNEEEEEEEDESEEEEESMAG-----GPQGRGRGRGIMWP 480

Query: 481 PHMPMGRGPRPFHGMPGFPPGMMGP-DGLPYGPVTPDGFPMPDMFGMAPRGFGPYGPRFP 540
           P MP+GRG RP  GM GFP G+MGP D  PYGP   +G  MPD FGM PR FGPYGPRF 
Sbjct: 481 PQMPLGRGIRPMPGMGGFPLGVMGPGDAFPYGPGGYNG--MPDPFGMGPRPFGPYGPRFG 540

Query: 541 GDFMNPPAAMMFRGRPSQPGVMFPPGGFGMMMGQGRGPFMGGMGVPGPNPARPGRPMGVS 600
           GDF  P   MMF GRP Q    FP GG+G MMG GRGP MGGMG    N  R GRPM   
Sbjct: 541 GDFRGPVPGMMFPGRPPQ---QFPHGGYG-MMGGGRGPHMGGMG----NAPRGGRPM--- 600

Query: 601 PLYPP---PALPSSQNINRAAKRDQRGGPGSDRNDRYITGPDQNKGQEMPRHDEEMQYKQ 660
             YPP    A P   N     + D+RG          ++G  QN               Q
Sbjct: 601 -YYPPATSSARPGPSNRKTPERSDERG----------VSGDQQN---------------Q 631

Query: 661 SKTYPDEQYGLGTTSRNEESES--EDEAPRRSRHGEGKKKR 696
             ++  EQ+ +G + RNEESES  EDEAPRRSRHGEGKK+R
Sbjct: 661 DASHDMEQFEVGNSLRNEESESEDEDEAPRRSRHGEGKKRR 631

[Close]

BLAST of Carg21393 vs. TAIR 10
Match: AT1G30460.2 (cleavage and polyadenylation specificity factor 30 )

HSP 1 Score: 276.9 bits (707), Expect = 4.4e-74
Identity = 153/264 (57.95%), Postives = 180/264 (68.18%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIIQSDSSSFPAASAVSNSVAGAVGPAATAD 60
           MED++G LSFDFEGGLD+GP     T+S+P+   ++SS           + AV  A T D
Sbjct: 1   MEDADG-LSFDFEGGLDSGPVQ--NTASVPVAPPENSS-----------SAAVNVAPTYD 60

Query: 61  APGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
              A     G  RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMPICRFFRLYGECREQ
Sbjct: 61  HSSATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGSDCRYRHAKLPGPPPPVEEILQKVQQLGSYNYGSS 180
           DCVYKHTNEDIKECNMYK GFCPNG DCRYRHAKLPGPPPPVEE+LQK+QQL +YNYG +
Sbjct: 121 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYG-T 180

Query: 181 NKFFSQRGVGLSQQNEKSQIPQGPAPVTQGVLGNPSAAESADVQQPQAQQTAQQTSQTQT 240
           N+ +  R V    Q+     PQG  P+     G P   ES ++QQ Q QQ  QQ+    +
Sbjct: 181 NRLYQARNVAPQLQDR----PQGQVPMQ----GQPQ--ESGNLQQ-QQQQQPQQSQHQVS 238

Query: 241 QGLSNGQPNQLNTTATSLPPGISR 265
           Q L     +Q N T+  LP G++R
Sbjct: 241 QTLIPNPADQTNRTSHPLPQGVNR 238

[Close]

BLAST of Carg21393 vs. TAIR 10
Match: AT4G11970.1 (YTH family protein )

HSP 1 Score: 135.6 bits (340), Expect = 1.6e-31
Identity = 75/155 (48.39%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 248 PNQLNT---TATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADN 307
           P+QL +      S P   +RYFI+KS N +N+++SV++G+WATQ  NE  L  AF  +  
Sbjct: 54  PDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGR 113

Query: 308 VILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAH-YGQNFSLKWLKLCELSFQK 367
           VILIFSVN +  FQG A+M++ +G       W    G  + +G++F +KWL+L EL FQK
Sbjct: 114 VILIFSVNMSGFFQGYAEMLSPVGWR-RDQIWSQGGGKNNPWGRSFKVKWLRLSELPFQK 173

Query: 368 TRHLRNPYNENLPVKISRDCQELEPSIGEQLASLL 399
           T HL+NP N+  PVKISRDCQEL   IGE L  LL
Sbjct: 174 TLHLKNPLNDYKPVKISRDCQELPEDIGEALCELL 207

[Close]

BLAST of Carg21393 vs. TAIR 10
Match: AT4G11970.2 (YTH family protein )

HSP 1 Score: 135.6 bits (340), Expect = 1.6e-31
Identity = 75/155 (48.39%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 248 PNQLNT---TATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADN 307
           P+QL +      S P   +RYFI+KS N +N+++SV++G+WATQ  NE  L  AF  +  
Sbjct: 54  PDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGR 113

Query: 308 VILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAH-YGQNFSLKWLKLCELSFQK 367
           VILIFSVN +  FQG A+M++ +G       W    G  + +G++F +KWL+L EL FQK
Sbjct: 114 VILIFSVNMSGFFQGYAEMLSPVGWR-RDQIWSQGGGKNNPWGRSFKVKWLRLSELPFQK 173

Query: 368 TRHLRNPYNENLPVKISRDCQELEPSIGEQLASLL 399
           T HL+NP N+  PVKISRDCQEL   IGE L  LL
Sbjct: 174 TLHLKNPLNDYKPVKISRDCQELPEDIGEALCELL 207

[Close]

BLAST of Carg21393 vs. TAIR 10
Match: AT4G11970.3 (YTH family protein )

HSP 1 Score: 135.6 bits (340), Expect = 1.6e-31
Identity = 75/155 (48.39%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 248 PNQLNT---TATSLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADN 307
           P+QL +      S P   +RYFI+KS N +N+++SV++G+WATQ  NE  L  AF  +  
Sbjct: 54  PDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGR 113

Query: 308 VILIFSVNRTRHFQGCAKMMTRIGGSVSGGNWKYAHGTAH-YGQNFSLKWLKLCELSFQK 367
           VILIFSVN +  FQG A+M++ +G       W    G  + +G++F +KWL+L EL FQK
Sbjct: 114 VILIFSVNMSGFFQGYAEMLSPVGWR-RDQIWSQGGGKNNPWGRSFKVKWLRLSELPFQK 173

Query: 368 TRHLRNPYNENLPVKISRDCQELEPSIGEQLASLL 399
           T HL+NP N+  PVKISRDCQEL   IGE L  LL
Sbjct: 174 TLHLKNPLNDYKPVKISRDCQELPEDIGEALCELL 207

The following BLAST results are available for this feature:

BLAST of Carg21393 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583855.1	0.0e+00	100.00	30-kDa cleavage and polyadenylation specificity factor 30, partial [Cucurbita ar...	[more]
XP_023520093.1	0.0e+00	98.87	30-kDa cleavage and polyadenylation specificity factor 30-like [Cucurbita pepo s...	[more]
XP_022927141.1	0.0e+00	99.15	30-kDa cleavage and polyadenylation specificity factor 30-like [Cucurbita moscha...	[more]
XP_023001070.1	0.0e+00	98.45	30-kDa cleavage and polyadenylation specificity factor 30-like [Cucurbita maxima...	[more]
XP_022140120.1	0.0e+00	88.76	30-kDa cleavage and polyadenylation specificity factor 30 [Momordica charantia]	[more]

BLAST of Carg21393 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A9LNK9	5.2e-221	63.05	30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thalian...	[more]
Q0DA50	1.1e-197	56.98	Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica OX...	[more]
B2RR83	2.3e-27	48.59	3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1	[more]
Q5R746	2.3e-27	48.59	3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2	[more]
Q9H6S0	5.1e-27	48.59	3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2	[more]

BLAST of Carg21393 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGV5	0.0e+00	99.15	30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucurbita mosc...	[more]
A0A6J1KK22	0.0e+00	98.45	30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucurbita maxi...	[more]
A0A6J1CE78	0.0e+00	88.76	30-kDa cleavage and polyadenylation specificity factor 30 OS=Momordica charantia...	[more]
A0A5D3C2W1	0.0e+00	87.73	30-kDa cleavage and polyadenylation specificity factor 30 OS=Cucumis melo var. m...	[more]
A0A1S3BC28	0.0e+00	87.73	30-kDa cleavage and polyadenylation specificity factor 30 OS=Cucumis melo OX=365...	[more]

BLAST of Carg21393 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30460.1	3.7e-222	63.05	cleavage and polyadenylation specificity factor 30	[more]
AT1G30460.2	4.4e-74	57.95	cleavage and polyadenylation specificity factor 30	[more]
AT4G11970.1	1.6e-31	48.39	YTH family protein	[more]
AT4G11970.2	1.6e-31	48.39	YTH family protein	[more]
AT4G11970.3	1.6e-31	48.39	YTH family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 440..463
None	No IPR available	GENE3D	4.10.1000.10		coord: 68..132 e-value: 1.4E-15 score: 59.1
None	No IPR available	GENE3D	3.10.590.10	ph1033 like domains	coord: 243..401 e-value: 7.4E-53 score: 180.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 658..672
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 673..701
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 578..709
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 588..607
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..475
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 642..657
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..257
None	No IPR available	PANTHER	PTHR12357	YTH YT521-B HOMOLOGY DOMAIN-CONTAINING	coord: 1..705
None	No IPR available	PANTHER	PTHR12357:SF106	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45	coord: 1..705
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 74..100 e-value: 3.5E-4 score: 29.9 coord: 130..154 e-value: 0.099 score: 21.7 coord: 102..128 e-value: 0.051 score: 22.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 74..101 score: 12.83077
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 128..155 score: 12.079642
IPR007275	YTH domain	PFAM	PF04146	YTH	coord: 263..397 e-value: 1.2E-44 score: 152.7
IPR007275	YTH domain	PROSITE	PS50882	YTH	coord: 263..398 score: 58.534847
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 74..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21393-RA	Carg21393-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:1990247	N6-methyladenosine-containing RNA binding
molecular_function	GO:0003723	RNA binding