Carg21272 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21272
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1
Location	Carg_Chr15: 9037609 .. 9038779 (+)
RNA-Seq Expression	Carg21272
Synteny	Carg21272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGCCAAAATCGTTTTCTGAATTTTTGGGGCTGAAAATCTCAAAGATGATAACCCATCTCTCTTCTCTTCGTCAAGCTCCAACCTCCCTGTTTGTCTCAACTTTTACGAGTTCTTCTCCTTCACCGCCCAATGTCGGAGCAATCCCTCACCGGATTTCACTTGAGCGCCATCCTCTCAGAAACCGAAGCTTCATCAGTAGAAGAAACGGGATTATCTGTGCGGCAATCTTGCCTGTGGATCCATGGGCGCCCAACATCGATTCTCAGAGCGTAGCCTCACAGATCTTTGCCTTTTCCCTGTTTCCGTACATCGGTTTCTTGTACTTCATCACCAAATCAAAGACGGCTCCGAAGCTCACTCTCTTCGGATTCTATTTCTTGCTTGCCTTCGTTGGCGCTACCAGTGAGTTCTCCTAGTTCATCTCCTTTGTTTTAGGTTTTAATTTGATTTACAGTTCGATGTGAATATCTTTTCCCTTTTGTTTTGAGTATCCATTGAAATTGATCGCAAAAGTTCTTGAAATTCTATAGCAATTGGCATGTGCGTCTATGAATTACCACTGATTTTGAAGCTTTGAATGATTAGATTCGGATATTTCTAACCATTTGTATCCATTTTGTTGAATGAAAAGTTTACCTAACGCTTATTGTTCATTGCTGATAACTACTTGATTTCGACTCATGTTGGGCACAACTCTGCAGTTCCTGCTGGAATATATGGTAATTATAGCTCATCAAACAACATTTTCTGTTCATATGGCTTTCTTTTTTGCTTAATTTCCAATGGTTTTGCTCTCTTGGAACAGCAAAGGTTCAATATGGAACCTCCTTGTCTAATGTTGATTGGTTACATGGAGGGGCTGAATCGCTTCTCACTCTGACAAATCTATTCATTGTGTTGGGTTTGAGAGGAGCTCTTAGGAAGTATGAGAAGGATGAAATCTCTACTTCCTCCCCTGTTCTTGAGTTGGAGAAAGAGAAAGCTTAAGTTCTTTGTTTAGAATTATTCAAATTAGACAGGATCCTTGTTGGTAGAATAATTCGAATCTCAAACAAGTTTTCTTGTCTTAAGATATTCGATTAACGAGGTAATCCGAATCTTATGAACTAATTTGATGCTTTTACTGATGCAGCCATGCTGTCTATTGTACACCATTTCTTCACTCTAG

mRNA sequence

ATTAGCCAAAATCGTTTTCTGAATTTTTGGGGCTGAAAATCTCAAAGATGATAACCCATCTCTCTTCTCTTCGTCAAGCTCCAACCTCCCTGTTTGTCTCAACTTTTACGAGTTCTTCTCCTTCACCGCCCAATGTCGGAGCAATCCCTCACCGGATTTCACTTGAGCGCCATCCTCTCAGAAACCGAAGCTTCATCAGTAGAAGAAACGGGATTATCTGTGCGGCAATCTTGCCTGTGGATCCATGGGCGCCCAACATCGATTCTCAGAGCGTAGCCTCACAGATCTTTGCCTTTTCCCTGTTTCCGTACATCGGTTTCTTGTACTTCATCACCAAATCAAAGACGGCTCCGAAGCTCACTCTCTTCGGATTCTATTTCTTGCTTGCCTTCGTTGGCGCTACCACAAAGGTTCAATATGGAACCTCCTTGTCTAATGTTGATTGGTTACATGGAGGGGCTGAATCGCTTCTCACTCTGACAAATCTATTCATTGTGTTGGGTTTGAGAGGAGCTCTTAGGAAGTATGAGAAGGATGAAATCTCTACTTCCTCCCCTGTTCTTGAGTTGGAGAAAGAGAAAGCTTAAGTTCTTTGTTTAGAATTATTCAAATTAGACAGGATCCTTGTTGGTAGAATAATTCGAATCTCAAACAAGTTTTCTTGTCTTAAGATATTCGATTAACGAGGTAATCCGAATCTTATGAACTAATTTGATGCTTTTACTGATGCAGCCATGCTGTCTATTGTACACCATTTCTTCACTCTAG

Coding sequence (CDS)

ATGATAACCCATCTCTCTTCTCTTCGTCAAGCTCCAACCTCCCTGTTTGTCTCAACTTTTACGAGTTCTTCTCCTTCACCGCCCAATGTCGGAGCAATCCCTCACCGGATTTCACTTGAGCGCCATCCTCTCAGAAACCGAAGCTTCATCAGTAGAAGAAACGGGATTATCTGTGCGGCAATCTTGCCTGTGGATCCATGGGCGCCCAACATCGATTCTCAGAGCGTAGCCTCACAGATCTTTGCCTTTTCCCTGTTTCCGTACATCGGTTTCTTGTACTTCATCACCAAATCAAAGACGGCTCCGAAGCTCACTCTCTTCGGATTCTATTTCTTGCTTGCCTTCGTTGGCGCTACCACAAAGGTTCAATATGGAACCTCCTTGTCTAATGTTGATTGGTTACATGGAGGGGCTGAATCGCTTCTCACTCTGACAAATCTATTCATTGTGTTGGGTTTGAGAGGAGCTCTTAGGAAGTATGAGAAGGATGAAATCTCTACTTCCTCCCCTGTTCTTGAGTTGGAGAAAGAGAAAGCTTAA

Protein sequence

MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAAILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATTKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLELEKEKA

Homology

[Close]

BLAST of Carg21272 vs. NCBI nr
Match: KAG7017010.1 (hypothetical protein SDJN02_22121 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60
           MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA
Sbjct: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60

Query: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATT 120
           ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATT
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATT 120

Query: 121 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLELEKEKA 180
           KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLELEKEKA
Sbjct: 121 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLELEKEKA 179

[Close]

BLAST of Carg21272 vs. NCBI nr
Match: XP_022928766.1 (uncharacterized protein LOC111435592 [Cucurbita moschata])

HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89
Identity = 177/185 (95.68%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60
           MITHLSSLRQAPTSLFVSTF SSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA
Sbjct: 1   MITHLSSLRQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60

Query: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT- 120
           ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 -----TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180
                 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180

[Close]

BLAST of Carg21272 vs. NCBI nr
Match: XP_023522500.1 (uncharacterized protein LOC111786481 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.9 bits (847), Expect = 7.0e-87
Identity = 173/185 (93.51%), Postives = 174/185 (94.05%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60
           MITHL SLRQAPTSLFVSTF SSSPSPPNVGAIPHRISLERHPL NRSF S+RNGIICAA
Sbjct: 1   MITHLCSLRQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLGNRSFNSKRNGIICAA 60

Query: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT- 120
           ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 -----TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180
                 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180

[Close]

BLAST of Carg21272 vs. NCBI nr
Match: XP_022970106.1 (uncharacterized protein LOC111469097 [Cucurbita maxima])

HSP 1 Score: 330.5 bits (846), Expect = 9.1e-87
Identity = 172/185 (92.97%), Postives = 175/185 (94.59%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60
           MITHLS+LRQAPTSLFVSTF SSSPSPPNVGAIPHRISLERHPLRNRSF S+RNGIICAA
Sbjct: 1   MITHLSTLRQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLRNRSFNSKRNGIICAA 60

Query: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT- 120
           ILPVDPWAPNIDSQSVASQIFA SLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAISLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 -----TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180
                 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALR+YEKDEISTSSPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALREYEKDEISTSSPVLEL 180

[Close]

BLAST of Carg21272 vs. NCBI nr
Match: XP_023549839.1 (uncharacterized protein LOC111808225 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.2 bits (840), Expect = 4.5e-86
Identity = 172/185 (92.97%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60
           MITHL SL QAPTSLFVSTF SSSPSPPNVGAIPHRISLERHPL NRSF S+RNGIICAA
Sbjct: 1   MITHLCSLPQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLGNRSFNSKRNGIICAA 60

Query: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT- 120
           ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 -----TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180
                 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180

[Close]

BLAST of Carg21272 vs. ExPASy TrEMBL
Match: A0A6J1EL81 (uncharacterized protein LOC111435592 OS=Cucurbita moschata OX=3662 GN=LOC111435592 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.5e-90
Identity = 177/185 (95.68%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60
           MITHLSSLRQAPTSLFVSTF SSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA
Sbjct: 1   MITHLSSLRQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60

Query: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT- 120
           ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 -----TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180
                 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180

[Close]

BLAST of Carg21272 vs. ExPASy TrEMBL
Match: A0A6J1HZP6 (uncharacterized protein LOC111469097 OS=Cucurbita maxima OX=3661 GN=LOC111469097 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.4e-87
Identity = 172/185 (92.97%), Postives = 175/185 (94.59%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSPPNVGAIPHRISLERHPLRNRSFISRRNGIICAA 60
           MITHLS+LRQAPTSLFVSTF SSSPSPPNVGAIPHRISLERHPLRNRSF S+RNGIICAA
Sbjct: 1   MITHLSTLRQAPTSLFVSTFPSSSPSPPNVGAIPHRISLERHPLRNRSFNSKRNGIICAA 60

Query: 61  ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT- 120
           ILPVDPWAPNIDSQSVASQIFA SLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 
Sbjct: 61  ILPVDPWAPNIDSQSVASQIFAISLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATI 120

Query: 121 -----TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLEL 180
                 KVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALR+YEKDEISTSSPVLEL
Sbjct: 121 PAGIYAKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALREYEKDEISTSSPVLEL 180

[Close]

BLAST of Carg21272 vs. ExPASy TrEMBL
Match: A0A5A7TH63 (DUF3593 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G001880 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 160/180 (88.89%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSP-PNVGAIPHRISLERHPLRNRSFISRRNGIICA 60
           MITHL SLRQAPT  FVSTF SSSPS  PNVGA P+RIS+E HPLRNRSF S+RNGIIC 
Sbjct: 1   MITHLCSLRQAPTFPFVSTFLSSSPSSFPNVGANPYRISVEPHPLRNRSFKSKRNGIICG 60

Query: 61  AILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120
           AILPVDPWAPNIDSQS+ASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 61  AILPVDPWAPNIDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120

Query: 121 TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLELEKEKA 180
           TKV YGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKY + E +TSSPVLELEKEKA
Sbjct: 121 TKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENTTSSPVLELEKEKA 180

[Close]

BLAST of Carg21272 vs. ExPASy TrEMBL
Match: A0A5D3C2E2 (1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001940 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.4e-77
Identity = 159/186 (85.48%), Postives = 165/186 (88.71%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSP-PNVGAIPHRISLERHPLRNRSFISRRNGIICA 60
           MITHL SLRQAPT  FVSTF SSSPS  PNVGA P+RIS+E HPLRNRSF S+RNGIIC 
Sbjct: 1   MITHLCSLRQAPTFPFVSTFLSSSPSSFPNVGANPYRISVEPHPLRNRSFKSKRNGIICG 60

Query: 61  AILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120
           AILPVDPWAPNIDSQS+ASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 61  AILPVDPWAPNIDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120

Query: 121 ------TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLE 180
                  KV YGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKY + E +TSSPVLE
Sbjct: 121 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENTTSSPVLE 180

[Close]

BLAST of Carg21272 vs. ExPASy TrEMBL
Match: A0A0A0KKE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150460 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 156/186 (83.87%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 1   MITHLSSLRQAPTSLFVSTFTSSSPSP-PNVGAIPHRISLERHPLRNRSFISRRNGIICA 60
           MITHL SLR  PTS F+STF SSSPS  P+VGA P+RIS+E HPLRNRSFIS+RNGIIC 
Sbjct: 1   MITHLCSLRHPPTSPFISTFLSSSPSSFPSVGANPYRISVEPHPLRNRSFISKRNGIICG 60

Query: 61  AILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120
           AILPVDPWAPNIDSQS+ASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 61  AILPVDPWAPNIDSQSIASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 120

Query: 121 ------TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDEISTSSPVLE 180
                  KV YGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKY + E STSS VLE
Sbjct: 121 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENSTSSSVLE 180

[Close]

BLAST of Carg21272 vs. TAIR 10
Match: AT1G64355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 301 Blast hits to 301 proteins in 96 species: Archae - 0; Bacteria - 143; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). )

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44
Identity = 103/172 (59.88%), Postives = 118/172 (68.60%), Query Frame = 0


Query: 11  APTSLFVSTFTSSSPSPPNVGAIPHRISLER------HPLRNRSFISRRN----GIICAA 70
           +PT +    F  SSP     G     +S+ R      H    +   +RR+     I+C A
Sbjct: 8   SPTLISAVRFVGSSPFTTR-GLSQSTVSISRNKSFFFHFTETKEKNARRDYLRVSIVCDA 67

Query: 71  --ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGA 130
             + PVDPWAP IDSQS+ASQ+FA SLFPYIGFLYF+TKSK+APKLTLFGFYFLLAFVGA
Sbjct: 68  GGMFPVDPWAPTIDSQSIASQLFAVSLFPYIGFLYFLTKSKSAPKLTLFGFYFLLAFVGA 127

Query: 131 T------TKVQYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYEKDE 165
           T       KV YGTSLSNVDWLHGGAESLL LTNLFIVLGLR ALRK + D+
Sbjct: 128 TIPAGIYAKVHYGTSLSNVDWLHGGAESLLALTNLFIVLGLRQALRKSQDDD 178

[Close]

BLAST of Carg21272 vs. TAIR 10
Match: AT1G64355.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3593 (InterPro:IPR021995); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 111.7 bits (278), Expect = 6.2e-25
Identity = 66/121 (54.55%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 11  APTSLFVSTFTSSSPSPPNVGAIPHRISLER------HPLRNRSFISRRN----GIICAA 70
           +PT +    F  SSP     G     +S+ R      H    +   +RR+     I+C A
Sbjct: 8   SPTLISAVRFVGSSPFTTR-GLSQSTVSISRNKSFFFHFTETKEKNARRDYLRVSIVCDA 67

Query: 71  --ILPVDPWAPNIDSQSVASQIFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGA 120
             + PVDPWAP IDSQS+ASQ+FA SLFPYIGFLYF+TKSK+APKLTLFGFYFLLAFVGA
Sbjct: 68  GGMFPVDPWAPTIDSQSIASQLFAVSLFPYIGFLYFLTKSKSAPKLTLFGFYFLLAFVGA 127

The following BLAST results are available for this feature:

BLAST of Carg21272 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017010.1	1.1e-92	100.00	hypothetical protein SDJN02_22121 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022928766.1	2.0e-89	95.68	uncharacterized protein LOC111435592 [Cucurbita moschata]	[more]
XP_023522500.1	7.0e-87	93.51	uncharacterized protein LOC111786481 [Cucurbita pepo subsp. pepo]	[more]
XP_022970106.1	9.1e-87	92.97	uncharacterized protein LOC111469097 [Cucurbita maxima]	[more]
XP_023549839.1	4.5e-86	92.97	uncharacterized protein LOC111808225 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg21272 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL81	9.5e-90	95.68	uncharacterized protein LOC111435592 OS=Cucurbita moschata OX=3662 GN=LOC1114355...	[more]
A0A6J1HZP6	4.4e-87	92.97	uncharacterized protein LOC111469097 OS=Cucurbita maxima OX=3661 GN=LOC111469097...	[more]
A0A5A7TH63	1.5e-79	88.89	DUF3593 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C2E2	5.4e-77	85.48	1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform 1 OS=Cucumis melo v...	[more]
A0A0A0KKE9	1.3e-75	83.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G150460 PE=4 SV=1	[more]

BLAST of Carg21272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64355.1	1.2e-44	59.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G64355.2	6.2e-25	54.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021995	Protein of unknown function DUF3593	PFAM	PF12159	DUF3593	coord: 78..157 e-value: 2.3E-29 score: 101.3
IPR021995	Protein of unknown function DUF3593	PANTHER	PTHR35473	FAMILY NOT NAMED	coord: 9..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21272-RA	Carg21272-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016746	acyltransferase activity