Carg21095 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGCCCGACCTTCATCGTCAACTGAAGTGCCACTCACCAGTTTCTTCCTCCAATGACTTCCAGGTTCTCTAACTCATCGCCTTTCTTCCTCTCTTCTCATCATGTTTCAAATCTCTTCTCATTCCGCCCTTTCCTTTTCATTTTTAAATCTCAGGCGATTGAGAGCTTTCAAGCGATGGATGGCATCCCAAGGCATTCAATACACCGACGCTCTCGAATTCACGGATAGCTGCGGCGATGGAATTTCCGTCAAAGCCTTGTGCGATTTGCAGGAAGGGGATGTTGTTGCAACCATTCCTAAACTTGCTTGCCTCACCGTCAAGACCAGCAGTGCCTGTCCGATCATAGAAGAAGCCGGTTTGGGTGGCTATTTGGGGCTTTCGGTCGCTCTTATGTATGAGAGAAGTTTAGGGGAGAACTCTAATTGGGCTGGCTATCTCCAGCTTCTGCCCGACAAAGAGTTATTACCCTTGCTCTGGTCTCTACAAGATGTGGACCAGTTTCTTTGTGGAACTGAGCTACACAAGGTACGTCCACTTCTTTTTTCTCGGCTTCTATTTTAATCTCTGCTCTGTTAGGGAGTTTATGTATGGAATTATGTGCGAATATAGAATTAGTTTAAAGGTTCTGATGGATTCTTTGGCAGCTATTGTACATCTATCTAATTCACGAGGATGATTATATTATGACACTTCTCTTTAGTCTTGGAATGTATATGATCCATCGACTTTGTAGTTAGCTCAGAAATGTGGTGCCAAGAATTGCTGGGGCCTCAAATCTACCTCTGGGCTTCCCATTGATAATAATCGGGTTGTTTACACTCTATAGTGCTTTGGACGTACAAGAATTAAGAAACTAGAGATCTTGGTTATAATTAAGTTCTTGGATTGGTTGGACAAGGAGGGTACTTTGAGGTCGGGGAGGAGGAATATATCATGGTGAAAGTAGGACTATAAGGAGCTGGTTTGGGGGGAGTAAAACTTGTTGGAAACCGAAAGCTAAGGACTGTAAGTGTGTCAGCAGCATTACGATACTTCCCATTTTCAAAAAATTGCGAGGCAATTAAGAGACTTGTCATTCCGGGTTACACTTTGTGTTTTGAAAACACTGCTGTGAACCAGAACCTTTGGCATACAAAATGTTTATCCAGGACGCTTCAGTTAACTCTGTCGTAGGCCTTCGTGATATCGAGCTTAACAGCACCACATCTTTCTTCTTACACCTCCACTCTCATTGTTAATTTCCACTGAACTAGGGAGATATTCTCATTCTGACTCGAGAAGATTTCAACAATCAAGTTCTTGCTTCTTAGGGCTAAGAGTGTTGGGAGGGAGTCCCACATTAGCTAATATAGGGAATGATCATGTGTTTATAAGTAAGGAATACATCTTCATTGGTATGAGGCCTTTTAGGGAAATCCAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAAGATCATATCATTGTGGAGGGTTGTGATTCCTAACAAAGAGAAGGTGATGAAAGGAGCTGTCGGTATTTTATTTAAACATGTATTTTTGACCCAGAAGAGTATGTTCCTATGTGTTCAAGAACTGAAGAGGGATAGGGCTATCCTTCCTAGGAGATCTATCAGCTGGAGAGAGAGGGATGTATGTGACAAGATTCAGAAGTCCCAATAGTTTTTATTTACGTTATGTTCTGTATATACAAAAATCTGTAAAAAAAATTCTATTAATAATGGTCTTTCAATTAGTGAAAGAAAATACTTGAGGTCATATGGTTTTGTGTTTACTTCCTGCCTTCAAGTAGGTTCACCATTTTGTTATTTCTACTTATGATAAAGCGATGATGCAGTGACTTTTAAGTGTAATCTATGTAGATGATTTTTCTTACACTTTTAGGCAGACGGTGAAAGAAGACAAGACCCTTATGTTTGAGGACTGGAAAGAGAATATCGTGCCTCTTATGATGTCTGCACCTTTGATGTTCAGTCCAGAATTTTTTGGCGTTGAACAATATTTTTCTGTGAGGAGCCTCATTTCTTCTAGATCTTTCGAGATTGATGACTTTCATGGGTTTGGGATGGTCCCTTTGGCAGATCTGTAAGTTAATCCTCCTTCTAAATTGTTATCAATATATATACTTACCATTTTCAATTCTATGCATTATATATGGCCTCTAGAGTGCGGGAGAGGTACTAAGCTTATCGAAAGTCTGGCCAAATGGTAACTATTTTTTCTAAACTAAATAGTAGCAAATAGAGTTGCTTTGAGTCCTGTCAAGGACTTGTTTCTCAAAAGGATCCACCTAAAAGTGGTGGAGGAGCTTTGAGTCCTATCAAGGACTTGTTTTTTCATCTCATTTTTCTTGTCATGTGTCTATGTCTCGTCTCGAATTAGGTATTGGAGATGCTTAGGATTTAGGCACCTGATATGAATTATTTATACCTGTTGAATTATTGATCCTTCAACTTACGTATTATGTGTTTTTCACTTTAGTTTGAATATTTTGTTTGTCTTAACTTTTATAATATTATATTTTGATCTTCTGGTTAATTTTTCATATATATATATATATTTACAAAATCTTTAGTCTGCCAGTGTCCAATTTAACTATGGTGTAAAAGTTAAGAATTTTTTGGGAACATCCATGATCAAAAGAAAATATTTGAAGGCTCTTGAATTTGGTATAGTGGGTTAATTTTTACCTCCAACTTTTAATTTAATCAAATTGGACTTTAAATTTAAGTTTCATGATGCTCACCTTATGTTAGGTTTTTGTTTGAAGAATCAGTAAAAAGAAAAATATTGTGACCTGTGTTCAATGGACTACATGATCAAAGGTCTCTATGAAATTGTTTTGAAGAAGGATGAAATTTTGGCTAGATTTTATTTATTTATTTAGTTTTATTATTATTATTTTGAAATTGGTGAGTGTTGGTAGATTCATTGAGGACTAGAACTTGAAATTTTATCGTATTTATAAATATAAATTCTATATTAGAATAAGTATGATTCTCAAGGAATAAAATGGAATTTGAACTTGAATAATCATCATGATTCAGTTTGAATTAAGAACTCGGTGTTTATCATCTCTCATTAATTCATTGAAACCTAGGTTTAACCACAAGACGAATGCTGAGGATGTACACTTTACCTTGGTGTCTTCTGATGTCGAGTCTGATAATAGTACTTCTGACCTAAACGATGTACATCCATATGACGAGGAGTCCAAATGCTGGAATTCTCCTCCGGACAAAGAAGAACCAGATTCTCTTCTAACTGAGCTAAACAATGCATATGATACTGACTCAAACTCTTCGGAACTCGGAGGTGATCCCACCACGCTTGAGATGATCATGGTGAAGAATGTCGAAGCTGGCAGTGAGGTTAGTTTTTCGTTTCGTTAAATGAGAGATATTTCTCTTCACTCGGAACCAAATCTTGTCGACCTCTGTAGTTGCCATGTAAATGTTCAGTTGAAGGGGTTTGGAATAACTTTTTCGTTTCTTCTGCTGGACATTAGGTGTTCAATACATATGGTTTGCTGGGTAACGCTGCTTTGCTACACAGATACGGATTTACGGAAGCAAATAATCCCTACGATATCGTTAACATTGATTTGAATCTGGTTATTGATTGGAGTTCATCTCGATTTTCGAGGCGATACAGTAGAGCAAGAGTATCACTATGGAGAAAGTTGGAGTACCGTGGTTGTGGCAATGAAGACACTGAATATTTTGAGATATCATACGATGGGGAACCACAAACTGAACTACTGATATTAATTTACATAATGTTGCTACCAGAGGTTGCATTTAATCACTTTGATATGACTACATCATTATCAGGGAATTATAGTGGCGTTATGTTGTATCAAAAAGGAAACACCATCTGGGTTGAAGATTCAAAACTTACCCGGGATGTATTGTTGACTAAAGATGTTCGTAGAGCTCTCGTGTCGCTTGCAGATATGCGGGAAAGCTTATACGGTTCAAGATGTTTAGAAAAAGACGTCGAGATGGTATGTGGCGTACAAGATAGGAAGTTATATCATTCTTGGATGCTATGTGAGAGCGAGAGGATGATTCTGAAGAAACTCAGAGCTTATGCTGCTGTGGCTGGTCAGTCGTCGAGAACTGGAAGGCCATCGTCTCTGAGGAAGCACAGATGAACAAGTAATTTCATAATTTATGAGCTCATTCATCTTCAAATTTCACTCTCAATTATTTTTGTTGCTTCACTTGAATCATCTTCAAATTTCACTCAATTATTTTTGTTGCTTCACTTGAATCATCTTCAAATTTCTTCTTGTTTCTCCATCTCTACTCCTAACATTTGTTATTTTGAGGAGTTTGTCACCAAGGGATACTTTAG ACGCCCGACCTTCATCGTCAACTGAAGTGCCACTCACCAGTTTCTTCCTCCAATGACTTCCAGGCGATTGAGAGCTTTCAAGCGATGGATGGCATCCCAAGGCATTCAATACACCGACGCTCTCGAATTCACGGATAGCTGCGGCGATGGAATTTCCGTCAAAGCCTTGTGCGATTTGCAGGAAGGGGATGTTGTTGCAACCATTCCTAAACTTGCTTGCCTCACCGTCAAGACCAGCAGTGCCTGTCCGATCATAGAAGAAGCCGGTTTGGGTGGCTATTTGGGGCTTTCGGTCGCTCTTATGTATGAGAGAAGTTTAGGGGAGAACTCTAATTGGGCTGGCTATCTCCAGCTTCTGCCCGACAAAGAGTTATTACCCTTGCTCTGGTCTCTACAAGATGTGGACCAGTTTCTTTGTGGAACTGAGCTACACAAGGCAGACGGTGAAAGAAGACAAGACCCTTATGTTTGAGGACTGGAAAGAGAATATCGTGCCTCTTATGATGTCTGCACCTTTGATGTTCAGTCCAGAATTTTTTGGCGTTGAACAATATTTTTCTGTGAGGAGCCTCATTTCTTCTAGATCTTTCGAGATTGATGACTTTCATGGGTTTGGGATGGTCCCTTTGGCAGATCTGTTTAACCACAAGACGAATGCTGAGGATGTACACTTTACCTTGGTGTCTTCTGATGTCGAGTCTGATAATAGTACTTCTGACCTAAACGATGTACATCCATATGACGAGGAGTCCAAATGCTGGAATTCTCCTCCGGACAAAGAAGAACCAGATTCTCTTCTAACTGAGCTAAACAATGCATATGATACTGACTCAAACTCTTCGGAACTCGGAGGTGATCCCACCACGCTTGAGATGATCATGGTGAAGAATGTCGAAGCTGGCAGTGAGGTGTTCAATACATATGGTTTGCTGGGTAACGCTGCTTTGCTACACAGATACGGATTTACGGAAGCAAATAATCCCTACGATATCGTTAACATTGATTTGAATCTGGTTATTGATTGGAGTTCATCTCGATTTTCGAGGCGATACAGTAGAGCAAGAGTATCACTATGGAGAAAGTTGGAGTACCGTGGTTGTGGCAATGAAGACACTGAATATTTTGAGATATCATACGATGGGGAACCACAAACTGAACTACTGATATTAATTTACATAATGTTGCTACCAGAGGTTGCATTTAATCACTTTGATATGACTACATCATTATCAGGGAATTATAGTGGCGTTATGTTGTATCAAAAAGGAAACACCATCTGGGTTGAAGATTCAAAACTTACCCGGGATGTATTGTTGACTAAAGATGTTCGTAGAGCTCTCGTGTCGCTTGCAGATATGCGGGAAAGCTTATACGGTTCAAGATGTTTAGAAAAAGACGTCGAGATGGTATGTGGCGTACAAGATAGGAAGTTATATCATTCTTGGATGCTATGTGAGAGCGAGAGGATGATTCTGAAGAAACTCAGAGCTTATGCTGCTGTGGCTGGTCAGTCGTCGAGAACTGGAAGGCCATCGTCTCTGAGGAAGCACAGATGAACAAGTAATTTCATAATTTATGAGCTCATTCATCTTCAAATTTCACTCTCAATTATTTTTGTTGCTTCACTTGAATCATCTTCAAATTTCTTCTTGTTTCTCCATCTCTACTCCTAACATTTGTTATTTTGAGGAGTTTGTCACCAAGGGATACTTTAG ATGTGGACCAGTTTCTTTGTGGAACTGAGCTACACAAGGCAGACGGTGAAAGAAGACAAGACCCTTATGTTTGAGGACTGGAAAGAGAATATCGTGCCTCTTATGATGTCTGCACCTTTGATGTTCAGTCCAGAATTTTTTGGCGTTGAACAATATTTTTCTGTGAGGAGCCTCATTTCTTCTAGATCTTTCGAGATTGATGACTTTCATGGGTTTGGGATGGTCCCTTTGGCAGATCTGTTTAACCACAAGACGAATGCTGAGGATGTACACTTTACCTTGGTGTCTTCTGATGTCGAGTCTGATAATAGTACTTCTGACCTAAACGATGTACATCCATATGACGAGGAGTCCAAATGCTGGAATTCTCCTCCGGACAAAGAAGAACCAGATTCTCTTCTAACTGAGCTAAACAATGCATATGATACTGACTCAAACTCTTCGGAACTCGGAGGTGATCCCACCACGCTTGAGATGATCATGGTGAAGAATGTCGAAGCTGGCAGTGAGGTGTTCAATACATATGGTTTGCTGGGTAACGCTGCTTTGCTACACAGATACGGATTTACGGAAGCAAATAATCCCTACGATATCGTTAACATTGATTTGAATCTGGTTATTGATTGGAGTTCATCTCGATTTTCGAGGCGATACAGTAGAGCAAGAGTATCACTATGGAGAAAGTTGGAGTACCGTGGTTGTGGCAATGAAGACACTGAATATTTTGAGATATCATACGATGGGGAACCACAAACTGAACTACTGATATTAATTTACATAATGTTGCTACCAGAGGTTGCATTTAATCACTTTGATATGACTACATCATTATCAGGGAATTATAGTGGCGTTATGTTGTATCAAAAAGGAAACACCATCTGGGTTGAAGATTCAAAACTTACCCGGGATGTATTGTTGACTAAAGATGTTCGTAGAGCTCTCGTGTCGCTTGCAGATATGCGGGAAAGCTTATACGGTTCAAGATGTTTAGAAAAAGACGTCGAGATGGTATGTGGCGTACAAGATAGGAAGTTATATCATTCTTGGATGCTATGTGAGAGCGAGAGGATGATTCTGAAGAAACTCAGAGCTTATGCTGCTGTGGCTGGTCAGTCGTCGAGAACTGGAAGGCCATCGTCTCTGAGGAAGCACAGATGA MWTSFFVELSYTRQTVKEDKTLMFEDWKENIVPLMMSAPLMFSPEFFGVEQYFSVRSLISSRSFEIDDFHGFGMVPLADLFNHKTNAEDVHFTLVSSDVESDNSTSDLNDVHPYDEESKCWNSPPDKEEPDSLLTELNNAYDTDSNSSELGGDPTTLEMIMVKNVEAGSEVFNTYGLLGNAALLHRYGFTEANNPYDIVNIDLNLVIDWSSSRFSRRYSRARVSLWRKLEYRGCGNEDTEYFEISYDGEPQTELLILIYIMLLPEVAFNHFDMTTSLSGNYSGVMLYQKGNTIWVEDSKLTRDVLLTKDVRRALVSLADMRESLYGSRCLEKDVEMVCGVQDRKLYHSWMLCESERMILKKLRAYAAVAGQSSRTGRPSSLRKHR Homology
BLAST of Carg21095 vs. NCBI nr
Match: KAG7027673.1 (RKM3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 775.4 bits (2001), Expect = 2.3e-220 Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
BLAST of Carg21095 vs. NCBI nr
Match: KAG6595711.1 (PHD finger protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 742.7 bits (1916), Expect = 1.6e-210 Identity = 369/372 (99.19%), Postives = 371/372 (99.73%), Query Frame = 0
BLAST of Carg21095 vs. NCBI nr
Match: XP_022925290.1 (ribosomal lysine N-methyltransferase 3 isoform X1 [Cucurbita moschata]) HSP 1 Score: 725.7 bits (1872), Expect = 2.1e-205 Identity = 362/372 (97.31%), Postives = 365/372 (98.12%), Query Frame = 0
BLAST of Carg21095 vs. NCBI nr
Match: XP_022925291.1 (ribosomal lysine N-methyltransferase 3 isoform X2 [Cucurbita moschata]) HSP 1 Score: 725.7 bits (1872), Expect = 2.1e-205 Identity = 362/372 (97.31%), Postives = 365/372 (98.12%), Query Frame = 0
BLAST of Carg21095 vs. NCBI nr
Match: XP_022966283.1 (N-lysine methyltransferase setd6 [Cucurbita maxima]) HSP 1 Score: 720.7 bits (1859), Expect = 6.7e-204 Identity = 358/380 (94.21%), Postives = 369/380 (97.11%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy Swiss-Prot
Match: P38222 (Ribosomal lysine N-methyltransferase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RKM3 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 3.3e-12 Identity = 50/172 (29.07%), Postives = 84/172 (48.84%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy Swiss-Prot
Match: Q5ZK17 (N-lysine methyltransferase SETD6 OS=Gallus gallus OX=9031 GN=SETD6 PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 3.0e-05 Identity = 48/201 (23.88%), Postives = 73/201 (36.32%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy Swiss-Prot
Match: E1BI64 (N-lysine methyltransferase SETD6 OS=Bos taurus OX=9913 GN=SETD6 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.9e-04 Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy Swiss-Prot
Match: Q6INM2 (N-lysine methyltransferase setd6 OS=Xenopus laevis OX=8355 GN=setd6 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.9e-04 Identity = 30/89 (33.71%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy Swiss-Prot
Match: C0H8I2 (N-lysine methyltransferase setd6 OS=Salmo salar OX=8030 GN=setd6 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.5e-04 Identity = 30/96 (31.25%), Postives = 48/96 (50.00%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy TrEMBL
Match: A0A6J1EHI5 (N-lysine methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111432572 PE=3 SV=1) HSP 1 Score: 725.7 bits (1872), Expect = 1.0e-205 Identity = 362/372 (97.31%), Postives = 365/372 (98.12%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy TrEMBL
Match: A0A6J1EBT9 (N-lysine methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111432572 PE=3 SV=1) HSP 1 Score: 725.7 bits (1872), Expect = 1.0e-205 Identity = 362/372 (97.31%), Postives = 365/372 (98.12%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy TrEMBL
Match: A0A6J1HRK8 (N-lysine methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111465992 PE=3 SV=1) HSP 1 Score: 720.7 bits (1859), Expect = 3.2e-204 Identity = 358/380 (94.21%), Postives = 369/380 (97.11%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy TrEMBL
Match: A0A5D3DYS1 (N-lysine methyltransferase setd6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00830 PE=4 SV=1) HSP 1 Score: 603.6 bits (1555), Expect = 5.8e-169 Identity = 304/373 (81.50%), Postives = 335/373 (89.81%), Query Frame = 0
BLAST of Carg21095 vs. ExPASy TrEMBL
Match: A0A5A7TUJ6 (N-lysine methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00180 PE=3 SV=1) HSP 1 Score: 601.3 bits (1549), Expect = 2.9e-168 Identity = 303/372 (81.45%), Postives = 334/372 (89.78%), Query Frame = 0
BLAST of Carg21095 vs. TAIR 10
Match: AT3G56570.1 (SET domain-containing protein ) HSP 1 Score: 340.5 bits (872), Expect = 1.8e-93 Identity = 197/397 (49.62%), Postives = 255/397 (64.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|