Carg20947 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20947
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein L25
LocationCarg_Chr20: 11162018 .. 11169130 (-)
RNA-Seq ExpressionCarg20947
SyntenyCarg20947
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCTCAACTCCTCGCTATTCCGGCTGCCATTGTTAATATCTCCGACCGATCATGGCCAAGTGGTGGCGCTACACCGGAACGAACCTTAGGTTGTTGGCGCTTTCCAGCGCTAGATCGGAACCGTTTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACTATCCAAGCCATCCCCAGAGAGTGCAGCGGCAGCAGAATTTCAACCAGAGATAGAGCGCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAACTCCTTGAGAAAAACTCCATCCACGGATCGCCGTCGCGGAAGCATCTGCTCACTGCAGAGCGGAAGCAAATCCACTCCATTCTCAAGTCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTACAGCTCCAAATCCGTGCTGGTTCTGGATCTTCAGTCCTTCTTGAATCAGGATCAATCCTTCCAATCAAAGTAAGCCATTCGTTTGTCTCCACCGGTTTGTTTGTGTTTAATTCAACTTGATTTTTCTTTCATTTTCTTGTTATGGAGTGATTGCTTGGGATTTTTCAGGTTCACAGGGATGAAGAGACCGGGAAGATCTTGAATATGGTGTTTGTATGGGCTGAGGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTCAAAGGGGAAGAGACTTGCCCCGGTCTTCAGAAAGGTAACCAACGAAGATATCTTACTTTAATTCTCAACCTGACGCAGTCGTATTCTTGGTTTCTTAGAGCAAGATATAAGTAGTCGTAGTCTTGTGGAATTAATTTACAAAAATAAGGCGAAAGTGCAATTGTCTAAGAATTTGTGTCCTTTTTACACGGTGTTATCAAAATTCCCCCTGGAGGGTGCTTTCACCGAAGAAGAGGTAGGGAAGGGGATTAAGCTTTTGGACCCCGATAAAACTCCGGGGACTGGATGGTTTTACCTCCGAATTCTTAAAAAAATGTTGGAACATTCTGAGAGCAGATGCATGAGAGTGTTCCAAGATTTTTTTAGAATGAAATTATCAACGGAAACTTGAATGAAACATATATCTATTTGATTTCAAAGAAATGATTACTTTTGCCCCATAAATCTTTTGTTGGAGAAGTTCTATCATATAACATTATAAGATTTATGATTACTAGGCAGCATATAACATTTGAGAGGGATGTTAGATTCTTGATACATTCCTCATGACAAACGAGTTAATAGACTGTTGGAAAAGGAGGAAACAAACCGGTGTAGACATCAAACTTGACCTAGAAAAAACCTTCAGTTGGACTTTTCTCGAGGCGCAAAATGGTATGGTGGATAAAAGGTTGCTTCTCATCCACAAATTTCTCCATCATCATCAATGGAAAGTTGAAAGGAAAAATCTAGGCTACTTTGGGTCTTGGACAAGAGAATTTACTATCCCTTTTTCTTTTCATATTGATAATGGATTGCCATAGTTGCTTACTCACCTAGGCAGAATACTAAGGCATACAAAGGGCTTTTAGGTTGGTAACAAAGACTTAAAGTATCGACCACTTCTAGTTTGCTAATGACACAATCCTCTGAATGTTGATAACATAATTCTTTTCTTTGAATTAACAAATGTCCCCTCCATAAAAACATGTTTGAGAAGGTAAAAACCTTCGAGAAGTTTTTGGGACAAAACATCAACCTTCAAAAAAACAGGGATGATGGACATTAATGTTAGCATAAAGGATATCAAAGACTTTGTCAACAAATATGGTTTAAAAAGCGTGAATGATCGAATGTACTTAGGATTACCCTTGAATCGGAACCCCAAATCCGTCTCTTTTTGGAAGACCATTATTGAGAAAATAAAAAATAAAAAGTTACCATTATGGTCATCATTTTAAACTTCTAATGCGGAAGGCTCACCCTAATACAAGCTACACTGTCCAGCCTTCCCACTTACTATATGTCTCTATTTGAAATGCCTATGAAGTGGCTATAGAAATATAAAGATCATTGAGAAACTCTATGTAGAAAGATGACCCACACCTTGTGATATGAACCAAGACCAAGAAATTTTCATACCTCAAGGTCCAATTACAAGGACAAGAGCCAAGAAGTTGCAACGAGTTTTAGTCACTTATATTCGAGCTAGGATGAGCTTGTCAAAGAAAATTGTAGAAGACGTTGAAGTCCTTCCCTACACGCGATGCAAAGTTGAGCTTCAAGATATAGATGAATTAAATGCATTTTAATTTGCATTTAATGAATTCATAGTTGAATTTATGAAACTTAGTCTAAGGATGGTTACTAGATAGCACATTTCTTTTATTGAATTATTTTAATAGTAATTTCAATATTTGTTTATCATTAAGCTAGTTTTAATATGAGAGTTAAGGTTATATTGTAACCCACATATCTCACTATATTCCATCATTAACTAGTCCTTTTAATATGGAGGTGGTGTATTTCTCATTAACTAGCCATTTTAATACGAAGGTTATGTACCTATTTAATTCACATAGGTTAAGGTTGTCAAAGACCATATAAAGTGTTAGATCTGGGTCTTATCTATATTTTGTTTTCCCTAAGATATTCCAAATCGTTTTTTTTTAATGGTAAATTGATTGGATTTTGAAAATATGTCACAAAATATAGCCTTTTCAACCTTAATCTACGTGAGTTAAATACACGCTTAACCTCCATATTAAAATTGCCCGTTAATGAGAAAATATGGTAACCTAGAACTTCCGACTAGTTAATGAGAAAAATATGGTAACCTAGGTGGGTTATAATATAACCTTAACTTCTATGTTAAAACTAGCTTGAATGATTAACAAATATTGAAATTACAATTAAAATAATGCATAAAAGAAATGCTCTATCTAGTAACATCATTGGACTAAGTCCCATAAATTCAACTATGAGTTCATTAAATGCAAATCCATTTAATGAACTCATAGCTCGAATATAAGTGACTAAAGCTCGTTGTCACCTCTTGGCTTTCGTCCTTGTAATTGGACCTTGAGTTATGGAAATTTCTTGGTCTTGGTTCATATCACCTTGTCCGATAGAATACTATAAACCTTCCAGTAAACAAGGGAGGACTCGTCCTATATTTGATAAAGGAGAAGAACAAAGCTCTCCTCTCGTCAAACGAGCACAAAGGCGCCTCCTTGTGTAGAAATCATATAAAGGCTAAATATGCTCCTACGTTATGGACAAGCCACAAAGGAGTCACGGAAGTATATAAAAAAGCTCCAAAACCTTATCACCATCTGCATTTGCCAAAGATTGGGTGATGGAGGAAACTCATCTTGCTGGATTAACCCTTAGATTGACAACACCACACTAGCCTTGCGGTATCCTCTTTTGCATAGATTCTCACAATGCAAAATGGCCACGACCAAAGAAACATGAAAAGACGTTAACAAAGCTAAGAAATGAATCGAATTAAGTCTTGACTTTACCTCAATTGTATTGTCTAAAAAATCAGTCTCATTGAAATGGTACCTTGCATTGACGGGGTCTTCCCCACAAAGTCTTTGACGATGGATATGGAGGAAAAGGTAGAAGCAATAAACCCCTCACTAGCAAAGGCAATATGTAAAGAAAATCATCCTTAAAAGGTAAAAGTTTTTTCTATGGAGAATGGTGCATAAAGCCCATTAGCACAACTAGAAACTTATAGCAAAGAATGTCGGACATTATTTCCTAATTGGTGTCCATTATGCAAGAAAGACAATGAATCACAAAACCATTTATTTATGCAGAGTGTCACAACCATACTATGAAAAGAGTAGGTTGTGACCCTCATATAAAGGCAGATAAGGTGGCAACACGGAAGTGGCGCCCAACTAGCCAAGCAAGGGCTGAGGTAGACAAGTATCATGATGCAACTGAGGAGGACGGTGCATCATTTAACACATCACTAAGATGTGCATGAAAACCCAAAATGAGACATAGGCAAGAAAGAGGTAACAGTGTTGACGTGAGTGTCAAAGATAGGCTTGGTAAGGTCAGGTAGGGTCTTGGGCCTTAATCTCAAAAGTCAGGGTTCTAGAGGACATTCAGGAATGTGGCTTTGGAGTTAAGCCCATCCATATGAAGTATGAATGCTCACGAAATTCGATATCAATCAGACATCGGATGGACGTTTCACGACGTCGTTTGACTGTTCGCCAAAATCACGTCTACTCCAGGAAGACTAGAAATGACTCAAAACGTACCTTAGGGGGGCATGATGTTAGCTCTCCACCACCCCTGGGCCCTATGGCCTAAGCGAGCTACCCTGTGGCACATATGTGTGTCATAGTGAGGGTGAGCGTTGCAAGATGAGTGTCTCGTATGACTTCCTTTGAATGTGTCTTTCAAAGACAGTGTCAGACGACACGGATGTGCCGATATGTGCCCTACCCCATGTGTTGGAGGTCGGATCATACACCTGCTATCCTGTACAGAGTCCGTAAATGATATGACATGGACACAAGAGGGTCCAATACCTCGATAGGCCCGGATGGATGGATGTTCGAGATGTCCTGATGTTATGAGAGACAAATGGGTCCATTCTTGATGAGCATGACCGAGCAAGCTAAGTTGGCTGATGACTTTTCGGGACTTGGGATGACATCATGACATGAAGACCATGTTAATTGGAAACCCAGATGATGTTGGGATACGACGTTGCTTACGAGAGACCTTGGCCCGGTTAAAGACAAGGTCGAGGCAGAGGACTTGGTCTATTGTGGAGGCAAGTCAAATTGAGTTGCAGATGATTGAATATGCACGCACGCATAAACGACGTGTGTGGCCGCGCTGGATGAGCTTGATTACACACAAGTTGTGTTCGGTGGGTAAAGACAACCTCACCTAAGGCCCGACAAAGCCACAAAGACGGACGACAAATGAATATGGGGACTTGAGTTCCCCTCAAGGCTTGTCGTGAGCATGTCAAGATCACAACACCACGGCGTTGAAAATGTACGACCGTGACATGGTATACACTTATGACTTTTGGACAAAAATTCTCAATATTTTTAGATGGCGTCTTACTTTTTCTAAGTATGCAAAAGAGTTATTAGATATGACCTTAATGAACTACACATTTAAGAACGAAAAAGCCTTGTCATGGACAAATCTCATTAGGGCTTCCCTTTTGGAGTCTATGGAAAGAATGAAATCGAAGAGTATTCACGGGGAAACACAGACTTATACTAGGCTTTTTGAAAACGTTGTTTACAACGTCATTTCTTGGTGTAAACTTTTGCTTCCTATAGTCATACTTCCCTTGTTGTATTGAGAAGGTACTTTGTAAGCATCATGGATAACATATCCCTTTGGTAAATTTCAAATATTAATGAATTTTTTTCCATTGAGGAATTAGTTTATTGAATCCAGAAAATATACTTAGCCGTCTGTGCACTTCTTATTGTTGCCAAGGTGACCCCGAAGTTTTATCTTAAGAGAAGCAAAAAAGTTAGTTGTAATTGGTTTCGCAATTTGGTCCCATCACTTTGACTTTCCTTTACTGTACAAAAGCGCACACCCCACTTTATAGTTCCAAGAAATTTCCCAAGACAAGATATCATAAAACGCAAAATAACTATAAGAAGGCTTCCCAACAAAAACTAATACTAGAGGGTGTCTAATTCTTAAATTGTTCGGAATAATACTCCAAGAAGCTGTGCAATATTTAATCATCTCAAAGCTTTCTTTCCTCCTGGGTTGCTCGAAGATTCTCTGTTTTCAAGTCTAAAGACCTCACAGAAAATAGCTTTAACCAATTGTTGATTCCAGGAACTTTAGCTTTCGTTTGTAATCTATGCCTCAGAGACATAAAAATGTTGTTTTTAGCTATTAAATCATATACTTAATATGAGAATCCAACTCGGGAATGCTGTGAATGTGAACTTAAACCATGATAGTTTCTACATCTCAGGTGATTGTGGAGTTCATTGAGACTTGAGAGTTTGCATCGACTACATTTCTTTAGTTCTTACTTCAAAGTATTTTGTACCATTTTTGTGAGCCATGTTAGACCCTGTTAGTCATTAATGATAAGCAATGATCTTAAGATGCATCGGCTGATGAGTTGTATCATGAAGCATTGACGTTTTGGGAAATATATGACATTTTCTGAAGTTCAAACTATGAACTATGGCCAAACTTAGGTAGATGCACCATTAGCCTTTTCAACTTTTGTTCTCTAATAATGGGTACCCTCTGGCCTGCAAGGCTTTTGCAAATTTGCTGTCTGTTGAATTTGATAGCCACAGTTCAGTTAATGATTATGCTGTTTAAACATGGTAAATAAAAGAAGGTCTTGATTGCTATCTGATCGTAGCTAGGATGATAAAGAGTTGGACAATTGATATGGTATAATTAAGCAAAACTTGTATTGTGGTCTTTGTCTGCCTGTCAACTGTTCTTCTGAAGTCTGATACCTTACTTTTGTGGAAAACAGGAGGTCAACTGAATAGGATAAGAACTAGCCTAAGATACCTTTGCCCGGCCGAGCACATTCCTTCGAAGATTGAGGTGGATGTAAGTAATCTGGAGATCGGGGAGAGAATTTTCATTCGCGATATAGACGTCCATCCTTCCTTGAAGCTACTTAGCAAGAACGAAGTCATGCCTATTTGTAAAATAGTCACAACAAACCCGAAACCGGCCATCACAGAAGCTTCAGAGCCTTCATGACTACTACGGATTCATTGACATTTAGGTTCAGAATCATTTGGTTTACTAAACAACTTATGGTTGAAGAGGCCAAAGAATAACATCCAGTTGGCTTCAAGTTAATCACAACTTATGGTTAAATTGTTATGTTCTTTGTATAAATTTGGAACCTTTTTTCCTGTTTCGATTCCTCGCTTTACTGACTTTTGATTTGCAAGCTGAGAATTTTGGTGAAGCTCAGGTTCATATTAGCTCTCAAGAGACCTCTTTCCTGCTGGATAAAAATTATCAGAGAAGATAAATGCTTAAAGAATTATTTATTACTGTAGGAAGGAAAAGGAATAATGATTGCACTAGAGATAAAACTGTCAAATTAATGGCCATTGCTAATTCTGAAATCTGTTTTGGTCTTGAAGTCTTTATATTCGCTCTCTACTTTGCTCTATAAATGACTTCTCTTGGTTCTTGTTCTTGTTC

mRNA sequence

CGCTCAACTCCTCGCTATTCCGGCTGCCATTGTTAATATCTCCGACCGATCATGGCCAAGTGGTGGCGCTACACCGGAACGAACCTTAGGTTGTTGGCGCTTTCCAGCGCTAGATCGGAACCGTTTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACTATCCAAGCCATCCCCAGAGAGTGCAGCGGCAGCAGAATTTCAACCAGAGATAGAGCGCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAACTCCTTGAGAAAAACTCCATCCACGGATCGCCGTCGCGGAAGCATCTGCTCACTGCAGAGCGGAAGCAAATCCACTCCATTCTCAAGTCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTACAGCTCCAAATCCGTGCTGGTTCTGGATCTTCAGTCCTTCTTGAATCAGGATCAATCCTTCCAATCAAAGTTCACAGGGATGAAGAGACCGGGAAGATCTTGAATATGGTGTTTGTATGGGCTGAGGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTCAAAGGGGAAGAGACTTGCCCCGGTCTTCAGAAAGGAGGTCAACTGAATAGGATAAGAACTAGCCTAAGATACCTTTGCCCGGCCGAGCACATTCCTTCGAAGATTGAGGTGGATGTAAGTAATCTGGAGATCGGGGAGAGAATTTTCATTCGCGATATAGACGTCCATCCTTCCTTGAAGCTACTTAGCAAGAACGAAGTCATGCCTATTTGTAAAATAGTCACAACAAACCCGAAACCGGCCATCACAGAAGCTTCAGAGCCTTCATGACTACTACGGATTCATTGACATTTAGGTTCAGAATCATTTGGTTTACTAAACAACTTATGGTTGAAGAGGCCAAAGAATAACATCCAGTTGGCTTCAAGTTAATCACAACTTATGGTTAAATTGTTATGTTCTTTGTATAAATTTGGAACCTTTTTTCCTGTTTCGATTCCTCGCTTTACTGACTTTTGATTTGCAAGCTGAGAATTTTGGTGAAGCTCAGGTTCATATTAGCTCTCAAGAGACCTCTTTCCTGCTGGATAAAAATTATCAGAGAAGATAAATGCTTAAAGAATTATTTATTACTGTAGGAAGGAAAAGGAATAATGATTGCACTAGAGATAAAACTGTCAAATTAATGGCCATTGCTAATTCTGAAATCTGTTTTGGTCTTGAAGTCTTTATATTCGCTCTCTACTTTGCTCTATAAATGACTTCTCTTGGTTCTTGTTCTTGTTC

Coding sequence (CDS)

ATGGCCAAGTGGTGGCGCTACACCGGAACGAACCTTAGGTTGTTGGCGCTTTCCAGCGCTAGATCGGAACCGTTTCCATTTTCATCATCTCGAGCTGCTTCTTACCATACTATCCAAGCCATCCCCAGAGAGTGCAGCGGCAGCAGAATTTCAACCAGAGATAGAGCGCAGGGAAGAATCCCCGCCGTTGTTTTCAGTCAACAACTCCTTGAGAAAAACTCCATCCACGGATCGCCGTCGCGGAAGCATCTGCTCACTGCAGAGCGGAAGCAAATCCACTCCATTCTCAAGTCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGTTACAGCTCCAAATCCGTGCTGGTTCTGGATCTTCAGTCCTTCTTGAATCAGGATCAATCCTTCCAATCAAAGTTCACAGGGATGAAGAGACCGGGAAGATCTTGAATATGGTGTTTGTATGGGCTGAGGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTCAAAGGGGAAGAGACTTGCCCCGGTCTTCAGAAAGGAGGTCAACTGAATAGGATAAGAACTAGCCTAAGATACCTTTGCCCGGCCGAGCACATTCCTTCGAAGATTGAGGTGGATGTAAGTAATCTGGAGATCGGGGAGAGAATTTTCATTCGCGATATAGACGTCCATCCTTCCTTGAAGCTACTTAGCAAGAACGAAGTCATGCCTATTTGTAAAATAGTCACAACAAACCCGAAACCGGCCATCACAGAAGCTTCAGAGCCTTCATGA

Protein sequence

MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTTNPKPAITEASEPS
Homology
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BLAST of Carg20947 vs. NCBI nr
Match: KAG7011163.1 (rplY [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 501.1 bits (1289), Expect = 5.5e-138
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI
Sbjct: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
           NPKPAITEASEPS
Sbjct: 241 NPKPAITEASEPS 253

[Close]
BLAST of Carg20947 vs. NCBI nr
Match: XP_023512718.1 (uncharacterized protein LOC111777386 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.8 bits (1270), Expect = 8.8e-136
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRA SYHTIQAIPRECSGSRISTRDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRATSYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSV+LPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVDLPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEETCPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
           NPKPAITEASEPS
Sbjct: 241 NPKPAITEASEPS 253

[Close]
BLAST of Carg20947 vs. NCBI nr
Match: XP_022928099.1 (uncharacterized protein LOC111434985 [Cucurbita moschata] >KAG6571398.1 hypothetical protein SDJN03_30313, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490.7 bits (1262), Expect = 7.4e-135
Identity = 250/253 (98.81%), Postives = 250/253 (98.81%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
           N KPAITEAS PS
Sbjct: 241 NLKPAITEASLPS 253

[Close]
BLAST of Carg20947 vs. NCBI nr
Match: XP_022971722.1 (uncharacterized protein LOC111470391 [Cucurbita maxima])

HSP 1 Score: 486.5 bits (1251), Expect = 1.4e-133
Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRIS+RDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
             KPAITEASEPS
Sbjct: 241 IQKPAITEASEPS 253

[Close]
BLAST of Carg20947 vs. NCBI nr
Match: XP_022155486.1 (uncharacterized protein LOC111022615 isoform X2 [Momordica charantia])

HSP 1 Score: 434.9 bits (1117), Expect = 4.8e-118
Identity = 222/253 (87.75%), Postives = 229/253 (90.51%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  G N RL ALS A SEPF   S RAA YHTIQAIPRECSGSRIS RDRAQGRI
Sbjct: 1   MAKWWRSAGINPRLAALSRATSEPFSSPSFRAALYHTIQAIPRECSGSRISNRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNS+HGS SRKHLLT ERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSVHGSSSRKHLLTTERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIK+HRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGL KGGQLN
Sbjct: 121 VLLESGSILPIKIHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLLKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVS L+IGERIFIRD+DVHPSLKLLSKNEVMPICKIV T
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSKLDIGERIFIRDVDVHPSLKLLSKNEVMPICKIVAT 240

Query: 241 NPKPAITEASEPS 254
           N     TE++EPS
Sbjct: 241 N-----TESAEPS 248

[Close]
BLAST of Carg20947 vs. ExPASy Swiss-Prot
Match: Q2NAN1 (50S ribosomal protein L25 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225 GN=rplY PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.0e-14
Identity = 55/181 (30.39%), Postives = 90/181 (49.72%), Query Frame = 0 

Query: 37  TIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSIL 96
           T+ A  RE +G   S   R +GR+PAV           I+G      ++  E K    ++
Sbjct: 6   TLPAEARERAGKGASRALRREGRVPAV-----------IYGGKEEPTMIHVEEK---LLI 65

Query: 97  KSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEEGSEL 156
           K +    F ++ ++++I  G     L +  ++ P+   R E         F    +G ++
Sbjct: 66  KQLMTGHFMNSIVEIEI-GGKTVRTLPKDVALHPVS-DRPEHAD------FFRLAKGGKI 125

Query: 157 KVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRD 216
           +V VP+VF  EE  PGL+KGG LN +R  L  +C  + IP +IE+DV+  E+G+ I I +
Sbjct: 126 EVSVPVVFMNEEASPGLKKGGVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISE 164

Query: 217 I 218
           I
Sbjct: 186 I 164

[Close]
BLAST of Carg20947 vs. ExPASy Swiss-Prot
Match: B8EK41 (50S ribosomal protein L25 OS=Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) OX=395965 GN=rplY PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13
Identity = 52/182 (28.57%), Postives = 91/182 (50.00%), Query Frame = 0 

Query: 33  ASYHTIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQI 92
           A   T+ A  R  +G   +   R +GRIP V++           G P+    +T + +++
Sbjct: 2   AETKTLAAAARHGTGKGAARSVRREGRIPGVIYG---------GGDPAEP--ITLDYREL 61

Query: 93  HSILKSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEE 152
           +   K +    F +T  ++ + AG+   V+     + PIK          L++ F+  + 
Sbjct: 62  N---KLIYAGHFLTTLFEIDV-AGTKQRVIPRDYQLDPIK-------DLPLHVDFLRLKP 121

Query: 153 GSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERI 212
           G+ LKV+VP+ F  +ETCPG++KGG +N +R S+    PA+ IP  I  D+  LEI + +
Sbjct: 122 GASLKVEVPVHFLNQETCPGVKKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSL 161

Query: 213 FI 215
            +
Sbjct: 182 HL 161

[Close]
BLAST of Carg20947 vs. ExPASy Swiss-Prot
Match: A5CF34 (50S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 GN=rplY PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.0e-13
Identity = 52/190 (27.37%), Postives = 93/190 (48.95%), Query Frame = 0 

Query: 55  RAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIR 114
           R QG++P V++ + +          +  H+ T E++    + K    PFF ST +QLQ+ 
Sbjct: 24  RRQGKVPGVIYKKGI----------TPIHVCTLEKE----VAKLYRKPFFSSTVIQLQVD 83

Query: 115 AGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEE-GSELKVDVPIVFKGEETCPGL 174
                    +   +LP  V     T  + ++ F+  E+ GS  KV VPI F+G+E   G+
Sbjct: 84  D--------QRFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKVPISFEGKEKSLGI 143

Query: 175 QKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMP 234
           ++GG LN ++  +  LCP + IP  I+ D++N+ +G  I I  +++     L+       
Sbjct: 144 KRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELPEGCNLVKSTTDYV 191

Query: 235 ICKIVTTNPK 244
           I  ++  + K
Sbjct: 204 IASVIGKSSK 191

[Close]
BLAST of Carg20947 vs. ExPASy Swiss-Prot
Match: Q5P9A5 (50S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) OX=234826 GN=rplY PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.5e-13
Identity = 38/120 (31.67%), Postives = 68/120 (56.67%), Query Frame = 0 

Query: 132 KVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCP 191
           ++ +   +G + ++ F + + G+E+KV+VP+VF  E+ C G++ GG LN +  SL   C 
Sbjct: 81  EIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCA 140

Query: 192 AEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTTNPKPAITEASE 251
            + IP  +EVD+ +L IG  I + D+ +  ++++  K E   I  +  T    A+ EA E
Sbjct: 141 PDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSAT---AAVEEAKE 197

[Close]
BLAST of Carg20947 vs. ExPASy Swiss-Prot
Match: B3CTF9 (50S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=rplY PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.5e-13
Identity = 50/190 (26.32%), Postives = 93/190 (48.95%), Query Frame = 0 

Query: 55  RAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIR 114
           R QG++P V++ + +          +  H+ T E++    + K    PFF ST +QLQ+ 
Sbjct: 24  RRQGKVPGVIYKKGI----------TPIHVCTLEKE----VAKLYRKPFFSSTVIQLQVD 83

Query: 115 AGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEE-GSELKVDVPIVFKGEETCPGL 174
                    +   +LP  V     T  I ++ F+  E+ G   KV VPI F+G++   G+
Sbjct: 84  D--------QRFKVLPKAVQLHPVTEFINHIDFILVEQNGGIQKVKVPISFEGKDKSLGI 143

Query: 175 QKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMP 234
           ++GG LN ++  +  LCP + IP  I+ D++N+ +G  I +  +++     L+ +     
Sbjct: 144 KRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVPVGASIKVSRLELPEGCNLVKRTTDYV 191

Query: 235 ICKIVTTNPK 244
           I  ++  + K
Sbjct: 204 IASVIGKSSK 191

[Close]
BLAST of Carg20947 vs. ExPASy TrEMBL
Match: A0A6J1EJW5 (uncharacterized protein LOC111434985 OS=Cucurbita moschata OX=3662 GN=LOC111434985 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.6e-135
Identity = 250/253 (98.81%), Postives = 250/253 (98.81%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
           N KPAITEAS PS
Sbjct: 241 NLKPAITEASLPS 253

[Close]
BLAST of Carg20947 vs. ExPASy TrEMBL
Match: A0A6J1I2R7 (uncharacterized protein LOC111470391 OS=Cucurbita maxima OX=3661 GN=LOC111470391 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.8e-134
Identity = 247/253 (97.63%), Postives = 249/253 (98.42%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR TGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRIS+RDRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIKVHRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
             KPAITEASEPS
Sbjct: 241 IQKPAITEASEPS 253

[Close]
BLAST of Carg20947 vs. ExPASy TrEMBL
Match: A0A6J1DRT2 (uncharacterized protein LOC111022615 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022615 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.3e-118
Identity = 222/253 (87.75%), Postives = 229/253 (90.51%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  G N RL ALS A SEPF   S RAA YHTIQAIPRECSGSRIS RDRAQGRI
Sbjct: 1   MAKWWRSAGINPRLAALSRATSEPFSSPSFRAALYHTIQAIPRECSGSRISNRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNS+HGS SRKHLLT ERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSVHGSSSRKHLLTTERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIK+HRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGL KGGQLN
Sbjct: 121 VLLESGSILPIKIHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLLKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           RIRTSLRYLCPAEHIPSKIEVDVS L+IGERIFIRD+DVHPSLKLLSKNEVMPICKIV T
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSKLDIGERIFIRDVDVHPSLKLLSKNEVMPICKIVAT 240

Query: 241 NPKPAITEASEPS 254
           N     TE++EPS
Sbjct: 241 N-----TESAEPS 248

[Close]
BLAST of Carg20947 vs. ExPASy TrEMBL
Match: A0A1S3C6P2 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.5e-117
Identity = 216/253 (85.38%), Postives = 231/253 (91.30%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  GTNLR   LS  +SE FPFSS RAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKN +HGSPSRKHLLT ERKQIHSILKSV+LPFFCSTR QLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL+IG+RIFIRD+DVHPSLKLLSKNEVMPICKIVTT
Sbjct: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 NPKPAITEASEPS 254
             K   TEASE S
Sbjct: 241 KSKTENTEASETS 252

[Close]
BLAST of Carg20947 vs. ExPASy TrEMBL
Match: A0A6J1DMJ5 (uncharacterized protein LOC111022615 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022615 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.7e-116
Identity = 222/258 (86.05%), Postives = 229/258 (88.76%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  G N RL ALS A SEPF   S RAA YHTIQAIPRECSGSRIS RDRAQGRI
Sbjct: 1   MAKWWRSAGINPRLAALSRATSEPFSSPSFRAALYHTIQAIPRECSGSRISNRDRAQGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVFSQQLLEKNS+HGS SRKHLLT ERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSVHGSSSRKHLLTTERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQK----- 180
           VLLESGSILPIK+HRDEETGKILNMVFVWA+EGSELKVDVPIVFKGEE CPGL K     
Sbjct: 121 VLLESGSILPIKIHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLLKVLWKT 180

Query: 181 GGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPIC 240
           GGQLNRIRTSLRYLCPAEHIPSKIEVDVS L+IGERIFIRD+DVHPSLKLLSKNEVMPIC
Sbjct: 181 GGQLNRIRTSLRYLCPAEHIPSKIEVDVSKLDIGERIFIRDVDVHPSLKLLSKNEVMPIC 240

Query: 241 KIVTTNPKPAITEASEPS 254
           KIV TN     TE++EPS
Sbjct: 241 KIVATN-----TESAEPS 253

[Close]
BLAST of Carg20947 vs. TAIR 10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 296.6 bits (758), Expect = 1.9e-80
Identity = 150/242 (61.98%), Postives = 182/242 (75.21%), Query Frame = 0 

Query: 1   MAKWWRYTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60
           MAKWWR  G       ++   +  F  S      Y TIQAIPRE +G  +S RDR  GRI
Sbjct: 1   MAKWWR--GLRSVTAEVADLPASSFGRSIRCIHQYQTIQAIPREATGRGVSARDRTIGRI 60

Query: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120
           PAVVF Q LL+ ++     SRK LLTA++KQI SI+ SV LPFFCST  QLQIRAG GSS
Sbjct: 61  PAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSIIDSVGLPFFCSTTFQLQIRAGQGSS 120

Query: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180
            L+ESG +LP+KVHRDEETGKILN+VFVWA++G +LKVDVP+VFKG + CPGLQKGG L 
Sbjct: 121 TLVESGRVLPLKVHRDEETGKILNLVFVWADDGEKLKVDVPVVFKGLDHCPGLQKGGNLR 180

Query: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240
            IR++L+ L PAEHIPSKIEVDVSNL+I +++ ++D+  HPSLKLLSKNE MP+CKIV T
Sbjct: 181 TIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQDVVFHPSLKLLSKNETMPVCKIVAT 240

Query: 241 NP 243
           +P
Sbjct: 241 SP 240

[Close]
BLAST of Carg20947 vs. TAIR 10
Match: AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-38
Identity = 80/201 (39.80%), Postives = 126/201 (62.69%), Query Frame = 0 

Query: 37  TIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSIL 96
           TI A+PR  SG  IS ++R  GR+P+++F Q+    +  HG    K L++ +  QI  ++
Sbjct: 53  TILAVPRSVSGKSISAKERKAGRVPSIIFEQE----DGQHG--GNKRLISVQTNQIRKLV 112

Query: 97  KSVELPFFCSTRLQLQIRAGSGSSVLLESGSILPIKVHRDEETGKILNMVFVWAEEGSEL 156
             +   FF S    +++RA  GS  ++E    LP  +H    T   LN+ F+ A  G+ L
Sbjct: 113 NHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALL 172

Query: 157 KVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRD 216
           KVD+P+VF G++  PGL+KG  LN I+ ++++LCPAE IP  IEVD+S L+IG+++ + D
Sbjct: 173 KVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGD 232

Query: 217 IDVHPSLKLLSKNEVMPICKI 238
           + VHP+LKL+ K++  PI K+
Sbjct: 233 LKVHPALKLI-KSKDEPIVKV 246

[Close]
BLAST of Carg20947 vs. TAIR 10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 152.5 bits (384), Expect = 4.5e-37
Identity = 82/214 (38.32%), Postives = 128/214 (59.81%), Query Frame = 0 

Query: 37  TIQAIPRECSGSRISTRDRAQGRIPAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSIL 96
           TI A+PR  SG  IS ++R  GR+P+++F Q+    +  HG    K L++ +  QI  ++
Sbjct: 53  TILAVPRSVSGKSISAKERKAGRVPSIIFEQE----DGQHG--GNKRLISVQTNQIRKLV 112

Query: 97  KSVELPFFCSTRLQLQIRAGSGSSVLLESGSILP-------------IKVHRDEETGKIL 156
             +   FF S    +++RA  GS  ++E    LP             IK+H    T   L
Sbjct: 113 NHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPL 172

Query: 157 NMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLNRIRTSLRYLCPAEHIPSKIEVDV 216
           N+ F+ A  G+ LKVD+P+VF G++  PGL+KG  LN I+ ++++LCPAE IP  IEVD+
Sbjct: 173 NVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDL 232

Query: 217 SNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKI 238
           S L+IG+++ + D+ VHP+LKL+ K++  PI K+
Sbjct: 233 SQLDIGQKLVMGDLKVHPALKLI-KSKDEPIVKV 259

The following BLAST results are available for this feature:
BLAST of Carg20947 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7011163.15.5e-138100.00rplY [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023512718.18.8e-13698.42uncharacterized protein LOC111777386 [Cucurbita pepo subsp. pepo][more]
XP_022928099.17.4e-13598.81uncharacterized protein LOC111434985 [Cucurbita moschata] >KAG6571398.1 hypothet... [more]
XP_022971722.11.4e-13397.63uncharacterized protein LOC111470391 [Cucurbita maxima][more]
XP_022155486.14.8e-11887.75uncharacterized protein LOC111022615 isoform X2 [Momordica charantia][more]
BLAST of Carg20947 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2NAN14.0e-1430.3950S ribosomal protein L25 OS=Erythrobacter litoralis (strain HTCC2594) OX=314225... [more]
B8EK412.0e-1328.5750S ribosomal protein L25 OS=Methylocella silvestris (strain DSM 15510 / CIP 108... [more]
A5CF342.0e-1327.3750S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 G... [more]
Q5P9A57.5e-1331.6750S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) OX=234826 G... [more]
B3CTF97.5e-1326.3250S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=... [more]
BLAST of Carg20947 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EJW53.6e-13598.81uncharacterized protein LOC111434985 OS=Cucurbita moschata OX=3662 GN=LOC1114349... [more]
A0A6J1I2R76.8e-13497.63uncharacterized protein LOC111470391 OS=Cucurbita maxima OX=3661 GN=LOC111470391... [more]
A0A6J1DRT22.3e-11887.75uncharacterized protein LOC111022615 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A1S3C6P21.5e-11785.3850S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1[more]
A0A6J1DMJ51.7e-11686.05uncharacterized protein LOC111022615 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of Carg20947 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G66860.11.9e-8061.98Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain [more]
AT4G23620.12.4e-3839.80Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain [more]
AT4G23620.24.5e-3738.32Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020057Ribosomal protein L25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 156..239
e-value: 1.4E-22
score: 79.8
IPR037121Ribosomal protein L25, C-terminalGENE3D2.170.120.20Ribosomal protein L25, beta domaincoord: 153..232
e-value: 5.0E-20
score: 73.5
NoneNo IPR availablePANTHERPTHR33284RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 1..243
NoneNo IPR availablePANTHERPTHR33284:SF2RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 1..243
IPR029751Ribosomal protein L25CDDcd00495Ribosomal_L25_TL5_CTCcoord: 37..147
e-value: 5.81933E-7
score: 44.3834
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 42..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20947-RACarg20947-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0003735 structural constituent of ribosome