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Carg20756 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTCAATTCGTCGACCCATCTCGCACCTCCGCCGCTTCGTTCACTGTCTCGTTCCTCCTTCGCTTTCTTTTCTCGCATCTTCTTGCACCCTGTTTCGCCCACTGGCTTCCCTAGGCGGAGTCTCGTCTCAGTTCGTGCTCAGGCGCCGACTCCCGATGGCTATGGATCCAAGCAGCCGCTCAGTTTGGGGAAATCTGAACCTTTGTTCGAGTCCACTGATTCGCCGTCGTCGTCATCGGTTATTGATTTCCTTACATTGTGCCATCGGCTTAAGGTATCCACACAATTTGGTCACGTGACGCAGATTGGCTAATGAGAAATTGGGGGATTTTTTTTTCCCCTTATTATAAAGAATTCTTTAACCTTTTGTTTTTGCCTGATTCTTGGAGATATCAAACGAACCACAATTAGAATTCATTTTCATGTTCGTTTCATTGTTGGCAGAGGAACTGGTATTTATTTATGCGTGTTATGTGAGAAAAGTGGTGACCTGAAAATTCTCTCTATTAGAGGTAATAATCACTTGGCTATTCTCTCTTCCTTGTAGACTACGAAGAGAAAGGGCTGGATCAATCATGGAATAAATGGTCCTGAATCAATTGCTGATCATATGTACCGCATGGCTTTGATGAGTTTGATAGCCGGTGATCTTCCAGGAGTGAATAGAGAAAGGTTGCACTTTTTCACCTGAGCCTTTAAAAGTCTATTATGAAGCTCTTTCTATTGAACTTTGTTTCACCATGACCTTGTTGTCCTTTGATCAGGTGTATCAAGATAGCTCTTGTGCATGATATTGCTGAAGGTACTTTCTGACACAATTTCTTATCATTTCCAGAACTTAATTCTAGCAATTATGCAGATTCTTGTCGAGTAATGATAATGATATTGCCATTCAACTAATGGAGATAGACTTGTTCTTATTCAGTTTGTTTTGAGTGGCATCCTGACTTAGTTTCTCCTTGTTAAGGTTCAATGTACATAATATTGCAACCAAATTTTGTGCTGTTTGTTTATGACTTATATGGTGTCACTTTTGTACATAATATTGCAACCAAATTTTGTACAAAATCGTCTATTTCATGATCCTAAGTGAGTTAGACATGACAAACACCGCTTGTGACTGGATATAGGAGGAATGTACGTGTTTTTTTTTTCTCCTGAGTGATAATGGTTGATATTGTATTTGGACTATGATAGCTATTGTTGGAGATATTACGCCATCTGATGGTGTTCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCTTTAAATGAAATGTGCCAACTTCTTGGTGGAGGCATGAGAGGTACGAAAATATTCCTATGAGATTTGGGTTTGGTTAGTGGCCGGAAAATATTGGCATTAACTCATGCTTCCTTGATCTTTTTGGACCTTTTTTTTAGCTGAAGAGATCAAAGAACTTTGGACCGAGTACGAAAACAATTCTTCATTGGAGGCTAATCTTGTGAAGGACTTCGATAAAGTATGTTGTTTGAGTTTCATCTTGATAAACTATCTGCAAATTATATTAAGTTAAGTGGGTCTTTTTTTTTTCATAAAGATTATCCTTGTCTTTGTTTATGTCTCGGATTGGAACAAATTACCATAATTCGTCTCCGCCTACGGATCAGGCGACATTTTTCACTAATTTTCCGAATGGAGGCCCTTATTTTCATATTTGTCATTCCTTACCTTAATTCCGAGGGAGGGAGTAAATGTGTTATGCTTATGTTAGTGGTTATGTCAGATTAAGAACACTCCTTTGCTGAATGTCGTGTATTTTGTAGGTTGAATTGATCCTTCAAGCATTTGAATATGAAATAGGTAACTCCAAAACCACGTTCTGGTTGCACTACAAACATTAGCTGATTGAAATTTGAGATTTGACATGAATTAATTACATTGGCAGAACATGGGAAGGAGCTTGATGAGTTCTTCCATTCAACAGCTGGTACATTCTACTTGTTTTACCATTTTAAGTTAAACTATAAATTTATTCCATAAATTTTGATGATTTTGTTTTCCAGTCCCTTAACCTTAGAAAGTTTCAATGACGCTATGAATACTGGTGTGCATTTTCCAGGAAAATTTCAGACTGATGTAGGAAAGAGTTGGGCAGCTGAGGTATTGTCCAGAAGGAATTCAAGATTGACAAACAGACATAATTGATGATCTTCTTTAGGTACTTCTTCCTTTATTGTTCATCCAACTCACAATACACAAGTTAAGAAAGTTGGAATTTGTGTATCTTAGAACAACACACTCTCCTGGTGATGCCTGCTGGGAGAAGTGGCTTTAGTTATTATTATCATCATCATATTTCTAAATTTAGGGTTCTTCGGTTAAATTATATATTTAATCGATACCTATTTGGTCTTTAATTTTGATTCGTTGGGAGAAGTGTAGCTAACTAGTTAAACTATACATCATTCATCAATAGATCAAAGGTTCGAATCCTCTCTATCCCATTAGATCAAGAAGCCAAGGATCGATTTTAGAACATTAAGTTAAAGGCTCGATCAAGAATGTCAATAAGTCAAAGGTTGATACAAGAACATCAATAAGTTGAACGTTGACTCAAGAACATCGATCTCTTGTCGATATAAGAATATAGGCCAAACCTAAGAGATCAATAACCCAAAGATTCACCCAAAGAAAATTGATGTGTGAAGCTGAAGATTGAAGCTTGAGAATAAGTAGTTTAGGTC ATGGCTGTCAATTCGTCGACCCATCTCGCACCTCCGCCGCTTCGTTCACTGTCTCGTTCCTCCTTCGCTTTCTTTTCTCGCATCTTCTTGCACCCTGTTTCGCCCACTGGCTTCCCTAGGCGGAGTCTCGTCTCAGTTCGTGCTCAGGCGCCGACTCCCGATGGCTATGGATCCAAGCAGCCGCTCAGTTTGGGGAAATCTGAACCTTTGTTCGAGTCCACTGATTCGCCGTCGTCGTCATCGGTTATTGATTTCCTTACATTGTGCCATCGGCTTAAGACTACGAAGAGAAAGGGCTGGATCAATCATGGAATAAATGGTCCTGAATCAATTGCTGATCATATGTACCGCATGGCTTTGATGAGTTTGATAGCCGGTGATCTTCCAGGAGTGAATAGAGAAAGGTGTATCAAGATAGCTCTTGTGCATGATATTGCTGAAGCTATTGTTGGAGATATTACGCCATCTGATGGTGTTCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCTTTAAATGAAATGTGCCAACTTCTTGGTGGAGGCATGAGAGCTGAAGAGATCAAAGAACTTTGGACCGAGTACGAAAACAATTCTTCATTGGAGGCTAATCTTGTGAAGGACTTCGATAAAGTTGAATTGATCCTTCAAGCATTTGAATATGAAATAGAACATGGGAAGGAGCTTGATGAGTTCTTCCATTCAACAGCTGGAAAATTTCAGACTGATGTAGGAAAGAGTTGGGCAGCTGAGGTATTGTCCAGAAGGAATTCAAGATTGACAAACAGACATAATTGATGATCTTCTTTAGGTACTTCTTCCTTTATTGTTCATCCAACTCACAATACACAAGTTAAGAAAGTTGGAATTTGTGTATCTTAGAACAACACACTCTCCTGGTGATGCCTGCTGGGAGAAGTGGCTTTAGTTATTATTATCATCATCATATTTCTAAATTTAGGGTTCTTCGGTTAAATTATATATTTAATCGATACCTATTTGGTCTTTAATTTTGATTCGTTGGGAGAAGTGTAGCTAACTAGTTAAACTATACATCATTCATCAATAGATCAAAGGTTCGAATCCTCTCTATCCCATTAGATCAAGAAGCCAAGGATCGATTTTAGAACATTAAGTTAAAGGCTCGATCAAGAATGTCAATAAGTCAAAGGTTGATACAAGAACATCAATAAGTTGAACGTTGACTCAAGAACATCGATCTCTTGTCGATATAAGAATATAGGCCAAACCTAAGAGATCAATAACCCAAAGATTCACCCAAAGAAAATTGATGTGTGAAGCTGAAGATTGAAGCTTGAGAATAAGTAGTTTAGGTC ATGGCTGTCAATTCGTCGACCCATCTCGCACCTCCGCCGCTTCGTTCACTGTCTCGTTCCTCCTTCGCTTTCTTTTCTCGCATCTTCTTGCACCCTGTTTCGCCCACTGGCTTCCCTAGGCGGAGTCTCGTCTCAGTTCGTGCTCAGGCGCCGACTCCCGATGGCTATGGATCCAAGCAGCCGCTCAGTTTGGGGAAATCTGAACCTTTGTTCGAGTCCACTGATTCGCCGTCGTCGTCATCGGTTATTGATTTCCTTACATTGTGCCATCGGCTTAAGACTACGAAGAGAAAGGGCTGGATCAATCATGGAATAAATGGTCCTGAATCAATTGCTGATCATATGTACCGCATGGCTTTGATGAGTTTGATAGCCGGTGATCTTCCAGGAGTGAATAGAGAAAGGTGTATCAAGATAGCTCTTGTGCATGATATTGCTGAAGCTATTGTTGGAGATATTACGCCATCTGATGGTGTTCCAAAAGAAGAAAAGAGCAGAAGAGAGTCAGCAGCTTTAAATGAAATGTGCCAACTTCTTGGTGGAGGCATGAGAGCTGAAGAGATCAAAGAACTTTGGACCGAGTACGAAAACAATTCTTCATTGGAGGCTAATCTTGTGAAGGACTTCGATAAAGTTGAATTGATCCTTCAAGCATTTGAATATGAAATAGAACATGGGAAGGAGCTTGATGAGTTCTTCCATTCAACAGCTGGAAAATTTCAGACTGATGTAGGAAAGAGTTGGGCAGCTGAGGTATTGTCCAGAAGGAATTCAAGATTGACAAACAGACATAATTGA MAVNSSTHLAPPPLRSLSRSSFAFFSRIFLHPVSPTGFPRRSLVSVRAQAPTPDGYGSKQPLSLGKSEPLFESTDSPSSSSVIDFLTLCHRLKTTKRKGWINHGINGPESIADHMYRMALMSLIAGDLPGVNRERCIKIALVHDIAEAIVGDITPSDGVPKEEKSRRESAALNEMCQLLGGGMRAEEIKELWTEYENNSSLEANLVKDFDKVELILQAFEYEIEHGKELDEFFHSTAGKFQTDVGKSWAAEVLSRRNSRLTNRHN Homology
BLAST of Carg20756 vs. NCBI nr
Match: KAG7017146.1 (SPCC4G3.17, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 530.8 bits (1366), Expect = 6.8e-147 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of Carg20756 vs. NCBI nr
Match: KAG6579705.1 (hypothetical protein SDJN03_24153, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145 Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of Carg20756 vs. NCBI nr
Match: XP_022928893.1 (HD domain-containing protein C4G3.17 [Cucurbita moschata]) HSP 1 Score: 518.8 bits (1335), Expect = 2.7e-143 Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of Carg20756 vs. NCBI nr
Match: XP_023551621.1 (HD domain-containing protein C4G3.17 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 515.4 bits (1326), Expect = 2.9e-142 Identity = 258/265 (97.36%), Postives = 260/265 (98.11%), Query Frame = 0
BLAST of Carg20756 vs. NCBI nr
Match: XP_022969821.1 (HD domain-containing protein C4G3.17 [Cucurbita maxima]) HSP 1 Score: 514.2 bits (1323), Expect = 6.6e-142 Identity = 257/265 (96.98%), Postives = 259/265 (97.74%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy Swiss-Prot
Match: P87242 (5'-deoxynucleotidase hdd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hdd1 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.8e-42 Identity = 94/186 (50.54%), Postives = 123/186 (66.13%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy Swiss-Prot
Match: Q3SXD3 (5'-deoxynucleotidase HDDC2 OS=Mus musculus OX=10090 GN=Hddc2 PE=1 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 5.7e-40 Identity = 87/187 (46.52%), Postives = 122/187 (65.24%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy Swiss-Prot
Match: Q7Z4H3 (5'-deoxynucleotidase HDDC2 OS=Homo sapiens OX=9606 GN=HDDC2 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 7.5e-40 Identity = 85/182 (46.70%), Postives = 122/182 (67.03%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy Swiss-Prot
Match: Q0P565 (5'-deoxynucleotidase HDDC2 OS=Bos taurus OX=9913 GN=HDDC2 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.3e-39 Identity = 84/182 (46.15%), Postives = 120/182 (65.93%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy Swiss-Prot
Match: Q54FK1 (5'-deoxynucleotidase HDDC2 OS=Dictyostelium discoideum OX=44689 GN=hddc2 PE=3 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39 Identity = 88/189 (46.56%), Postives = 123/189 (65.08%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy TrEMBL
Match: A0A6J1EQE3 (5'-deoxynucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111435665 PE=3 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143 Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy TrEMBL
Match: A0A6J1HYV3 (5'-deoxynucleotidase OS=Cucurbita maxima OX=3661 GN=LOC111468905 PE=3 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 3.2e-142 Identity = 257/265 (96.98%), Postives = 259/265 (97.74%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy TrEMBL
Match: A0A1S3C4X1 (5'-deoxynucleotidase OS=Cucumis melo OX=3656 GN=LOC103496922 PE=3 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130 Identity = 239/265 (90.19%), Postives = 245/265 (92.45%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy TrEMBL
Match: A0A0A0LHY9 (5'-deoxynucleotidase OS=Cucumis sativus OX=3659 GN=Csa_2G116270 PE=3 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 6.2e-130 Identity = 238/265 (89.81%), Postives = 245/265 (92.45%), Query Frame = 0
BLAST of Carg20756 vs. ExPASy TrEMBL
Match: A0A6J1FLN1 (5'-deoxynucleotidase OS=Cucurbita moschata OX=3662 GN=LOC111446937 PE=3 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 5.4e-126 Identity = 234/265 (88.30%), Postives = 240/265 (90.57%), Query Frame = 0
BLAST of Carg20756 vs. TAIR 10
Match: AT1G26160.1 (Metal-dependent phosphohydrolase ) HSP 1 Score: 344.4 bits (882), Expect = 8.4e-95 Identity = 182/265 (68.68%), Postives = 207/265 (78.11%), Query Frame = 0
BLAST of Carg20756 vs. TAIR 10
Match: AT2G23820.2 (Metal-dependent phosphohydrolase ) HSP 1 Score: 273.9 bits (699), Expect = 1.4e-73 Identity = 138/232 (59.48%), Postives = 174/232 (75.00%), Query Frame = 0
BLAST of Carg20756 vs. TAIR 10
Match: AT2G23820.1 (Metal-dependent phosphohydrolase ) HSP 1 Score: 246.5 bits (628), Expect = 2.4e-65 Identity = 127/213 (59.62%), Postives = 156/213 (73.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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