
Carg20753 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTTCCAAGTGAAGTCCCTGAAGACAACAACGATAATCTTCCGAACATGGTCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGATGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGGTTTTCGCCAAATCTTAAGGGACATGGAACTTGAACAACAACTCGTCGCCCAATTTTGA ATGCTTCTTCCAAGTGAAGTCCCTGAAGACAACAACGATAATCTTCCGAACATGGTCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGATGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGGTTTTCGCCAAATCTTAAGGGACATGGAACTTGAACAACAACTCGTCGCCCAATTTTGA ATGCTTCTTCCAAGTGAAGTCCCTGAAGACAACAACGATAATCTTCCGAACATGGTCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGATGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGGTTTTCGCCAAATCTTAAGGGACATGGAACTTGAACAACAACTCGTCGCCCAATTTTGA MLLPSEVPEDNNDNLPNMVSSGCDEERAKMVDERRQRRMISNRESARRSRMRKQKHLNQLWSQLARLCNENRDLEEKVSRLMESQQLLLQENVNLKQQVSGFRQILRDMELEQQLVAQF Homology
BLAST of Carg20753 vs. NCBI nr
Match: KAG7017149.1 (Basic leucine zipper 43, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 220.3 bits (560), Expect = 8.8e-54 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Carg20753 vs. NCBI nr
Match: XP_022929151.1 (basic leucine zipper 43-like [Cucurbita moschata]) HSP 1 Score: 210.7 bits (535), Expect = 7.0e-51 Identity = 118/129 (91.47%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of Carg20753 vs. NCBI nr
Match: KAG6579707.1 (Basic leucine zipper 43, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50 Identity = 118/129 (91.47%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of Carg20753 vs. NCBI nr
Match: XP_023550514.1 (basic leucine zipper 43-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 208.4 bits (529), Expect = 3.5e-50 Identity = 117/129 (90.70%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of Carg20753 vs. NCBI nr
Match: XP_038886758.1 (basic leucine zipper 43-like [Benincasa hispida]) HSP 1 Score: 127.5 bits (319), Expect = 7.8e-26 Identity = 71/92 (77.17%), Postives = 78/92 (84.78%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy Swiss-Prot
Match: Q9FMC2 (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.7e-15 Identity = 44/98 (44.90%), Postives = 73/98 (74.49%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy Swiss-Prot
Match: Q9CA46 (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.1e-12 Identity = 45/121 (37.19%), Postives = 79/121 (65.29%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.4e-06 Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.1e-06 Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy Swiss-Prot
Match: Q9M7Q4 (ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=ABF2 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy TrEMBL
Match: A0A6J1EMA3 (basic leucine zipper 43-like OS=Cucurbita moschata OX=3662 GN=LOC111435819 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.4e-51 Identity = 118/129 (91.47%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy TrEMBL
Match: A0A5D3BX57 (Basic leucine zipper 43-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00090 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 9.3e-25 Identity = 78/112 (69.64%), Postives = 85/112 (75.89%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy TrEMBL
Match: A0A1S3BCY9 (basic leucine zipper 43-like OS=Cucumis melo OX=3656 GN=LOC103488679 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 9.3e-25 Identity = 78/112 (69.64%), Postives = 85/112 (75.89%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy TrEMBL
Match: A0A2P6S3I8 (Putative transcription factor bZIP family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0164231 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 9.9e-19 Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of Carg20753 vs. ExPASy TrEMBL
Match: A0A803LC56 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17 Identity = 53/95 (55.79%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Carg20753 vs. TAIR 10
Match: AT1G13600.1 (basic leucine-zipper 58 ) HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18 Identity = 48/94 (51.06%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of Carg20753 vs. TAIR 10
Match: AT2G04038.1 (basic leucine-zipper 48 ) HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17 Identity = 50/103 (48.54%), Postives = 77/103 (74.76%), Query Frame = 0
BLAST of Carg20753 vs. TAIR 10
Match: AT3G30530.1 (basic leucine-zipper 42 ) HSP 1 Score: 84.0 bits (206), Expect = 9.2e-17 Identity = 49/111 (44.14%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Carg20753 vs. TAIR 10
Match: AT5G38800.1 (basic leucine-zipper 43 ) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 44/98 (44.90%), Postives = 73/98 (74.49%), Query Frame = 0
BLAST of Carg20753 vs. TAIR 10
Match: AT5G15830.1 (basic leucine-zipper 3 ) HSP 1 Score: 75.1 bits (183), Expect = 4.3e-14 Identity = 43/94 (45.74%), Postives = 69/94 (73.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|