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Carg20745 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTGTTGTACGTTTAACAATCTCTCTTCGGACAGTGATTCAATATTGAGGCATACATCTAGTGATTTCAAGAAGATGGGACAGCGTATCTTTGTGTTTATTGTAGGTGGAGCAACTAGGTCCGAGGTAAATTTTGTTCTTGTGTAATTTGAACTCATGCTTCTCTTTAGTTACTTGTCTGGATGCATTAATTATGTCTTTTTATCCTACAGCTTCGAGTTTGTCACAAGCTTACAGCAAAGTTGAAGAGAGAAGTAGTTTTAGGTTCAACAAGTATTGATGATCCTCCACAATTTATTACGGTATTTAGCTTCAACTAGATTTGCAGTTGTTTTCTGCCATTCATGTGACACCCATCATTTCTCATTAAATATTGTCTTTAATTGGTCCAGAAGCTTAAGATGTTGACTGCACATGAGCTCTCATTGGATGATCTCCAGATATAATTAGCAGCAGCCTCTAGTGTGCTCTTCAGCGCTATGCAACCTCTAGTGTGCTCTTTCAGCTTAGTCTTGTTGCTAGTTTGTCATGATCTTGTGATGAACTGTTGGCAGTAAAAGTTGTGCATAGTGCATAATGTAACATGTTTTACATTCACATATTGTAACATTTCTTAATGGAAAAGATAAGATTGAAACTGTACCTTACCAATTATACACATCCACTGAGACCCCACGGTTGAGACCGCTCGTAGTGTATTATCTCTCATGAAACTTAGGCTTCTCAGCGCTCTGAAATTCAATACTGAATTCAGAGATAGTTGTTAACCATTAACTAACAACAGATTTCCTTGGGCTTTCTATCCTGCACAGCCTCCGGTTCTCTTCTTGATTTCATGTATTGTTGCTTCCCAAATCCTCAGTCACTCTTTCCAACCCCAAAACATATAGAATTGCAAATGTGAAGTGTATGAAATCAAGTATTGATTTCTCGCAAGCAAGCCGAAAAGGCAAGTCACTGAGAAACAAACTTTTCGTGACAGCAATATGTCATTTCATGAGAAGGACTCATCTGGATTACTCAAGGAGAACAAAAAAAAATTTGCAAGAAAATAATCGCAGCAACTTATACCACAAGGAACAATTGAAAGTTGAAATACAAACCTATAGCACAATCATTTTTAAAATGAGGGGAAGGGGTTATATTCTCAACCAATTTCCATTAAAATAAACGAGTGCTATAAAAAAAACAAAAAACAAGTAAATTTCCAATGATAAACACGTTAAAAATTGAAAATTCTACAAACCATA ATGCATTGTTGTACGTTTAACAATCTCTCTTCGGACAGTGATTCAATATTGAGGCATACATCTAGTGATTTCAAGAAGATGGGACAGCGTATCTTTGTGTTTATTGTAGGTGGAGCAACTAGGTCCGAGCTTCGAGTTTGTCACAAGCTTACAGCAAAGTTGAAGAGAGAAGTAGTTTTAGGTTCAACAAGTATTGATGATCCTCCACAATTTATTACGAAGCTTAAGATGTTGACTGCACATGAGCTCTCATTGGATGATCTCCAGATATAATTAGCAGCAGCCTCTAGTGTGCTCTTCAGCGCTATGCAACCTCTAGTGTGCTCTTTCAGCTTAGTCTTGTTGCTAGTTTGTCATGATCTTGTGATGAACTATTATACACATCCACTGAGACCCCACGGTTGAGACCGCTCGTAGTGTATTATCTCTCATGAAACTTAGGCTTCTCAGCGCTCTGAAATTCAATACTGAATTCAGAGATAGTTGTTAACCATTAACTAACAACAGATTTCCTTGGGCTTTCTATCCTGCACAGCCTCCGGTTCTCTTCTTGATTTCATGTATTGTTGCTTCCCAAATCCTCAGTCACTCTTTCCAACCCCAAAACATATAGAATTGCAAATGTGAAGTGTATGAAATCAAGTATTGATTTCTCGCAAGCAAGCCGAAAAGGCAAGTCACTGAGAAACAAACTTTTCGTGACAGCAATATGTCATTTCATGAGAAGGACTCATCTGGATTACTCAAGGAGAACAAAAAAAAATTTGCAAGAAAATAATCGCAGCAACTTATACCACAAGGAACAATTGAAAGTTGAAATACAAACCTATAGCACAATCATTTTTAAAATGAGGGGAAGGGGTTATATTCTCAACCAATTTCCATTAAAATAAACGAGTGCTATAAAAAAAACAAAAAACAAGTAAATTTCCAATGATAAACACGTTAAAAATTGAAAATTCTACAAACCATA ATGCATTGTTGTACGTTTAACAATCTCTCTTCGGACAGTGATTCAATATTGAGGCATACATCTAGTGATTTCAAGAAGATGGGACAGCGTATCTTTGTGTTTATTGTAGGTGGAGCAACTAGGTCCGAGCTTCGAGTTTGTCACAAGCTTACAGCAAAGTTGAAGAGAGAAGTAGTTTTAGGTTCAACAAGTATTGATGATCCTCCACAATTTATTACGAAGCTTAAGATGTTGACTGCACATGAGCTCTCATTGGATGATCTCCAGATATAA MHCCTFNNLSSDSDSILRHTSSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLKREVVLGSTSIDDPPQFITKLKMLTAHELSLDDLQI Homology
BLAST of Carg20745 vs. NCBI nr
Match: KAG7017156.1 (SNARE-interacting protein KEULE, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 181.8 bits (460), Expect = 2.6e-42 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Carg20745 vs. NCBI nr
Match: XP_023550497.1 (SNARE-interacting protein KEULE-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Carg20745 vs. NCBI nr
Match: XP_023550493.1 (SNARE-interacting protein KEULE-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550494.1 SNARE-interacting protein KEULE-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550495.1 SNARE-interacting protein KEULE-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550496.1 SNARE-interacting protein KEULE-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Carg20745 vs. NCBI nr
Match: KAG6579713.1 (SNARE-interacting protein KEULE, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Carg20745 vs. NCBI nr
Match: XP_022928792.1 (SNARE-interacting protein KEULE-like isoform X1 [Cucurbita moschata] >XP_022928793.1 SNARE-interacting protein KEULE-like isoform X1 [Cucurbita moschata] >XP_022928794.1 SNARE-interacting protein KEULE-like isoform X1 [Cucurbita moschata] >XP_022928795.1 SNARE-interacting protein KEULE-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy Swiss-Prot
Match: Q9C5X3 (SNARE-interacting protein KEULE OS=Arabidopsis thaliana OX=3702 GN=KEU PE=1 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 1.7e-31 Identity = 67/79 (84.81%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy Swiss-Prot
Match: Q7XWP3 (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0252400 PE=3 SV=2) HSP 1 Score: 121.7 bits (304), Expect = 4.2e-27 Identity = 55/78 (70.51%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy Swiss-Prot
Match: Q9C5P7 (Protein transport Sec1a OS=Arabidopsis thaliana OX=3702 GN=SEC1A PE=2 SV=3) HSP 1 Score: 114.4 bits (285), Expect = 6.7e-25 Identity = 52/71 (73.24%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy Swiss-Prot
Match: Q5VNU3 (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0135900 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-24 Identity = 56/71 (78.87%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy Swiss-Prot
Match: Q9SZ77 (Protein transport Sec1b OS=Arabidopsis thaliana OX=3702 GN=SEC1B PE=2 SV=3) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-21 Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy TrEMBL
Match: A0A6J1ELW2 (SNARE-interacting protein KEULE-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435610 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy TrEMBL
Match: A0A6J1ELB0 (SNARE-interacting protein KEULE-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435610 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy TrEMBL
Match: A0A1S3C4J3 (SNARE-interacting protein KEULE isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496936 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.3e-34 Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy TrEMBL
Match: A0A0A0LKG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G150510 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.3e-34 Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Carg20745 vs. ExPASy TrEMBL
Match: A0A1S3C4Z0 (SNARE-interacting protein KEULE isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496936 PE=3 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.3e-34 Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Carg20745 vs. TAIR 10
Match: AT1G12360.1 (Sec1/munc18-like (SM) proteins superfamily ) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-32 Identity = 67/79 (84.81%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of Carg20745 vs. TAIR 10
Match: AT1G02010.1 (secretory 1A ) HSP 1 Score: 114.4 bits (285), Expect = 4.8e-26 Identity = 52/71 (73.24%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Carg20745 vs. TAIR 10
Match: AT1G02010.2 (secretory 1A ) HSP 1 Score: 109.0 bits (271), Expect = 2.0e-24 Identity = 49/69 (71.01%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of Carg20745 vs. TAIR 10
Match: AT4G12120.1 (Sec1/munc18-like (SM) proteins superfamily ) HSP 1 Score: 103.6 bits (257), Expect = 8.5e-23 Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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