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Carg20736 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCACCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCGGATCTACGCCGGAGGAGTGGAGGAGAACTACCTCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAGTGA ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCACCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCGGATCTACGCCGGAGGAGTGGAGGAGAACTACCTCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAGTGA ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCACCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCGGATCTACGCCGGAGGAGTGGAGGAGAACTACCTCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAGTGA MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAPSPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAKSSHGPQLVRFRSQRILSCLTGQ Homology
BLAST of Carg20736 vs. NCBI nr
Match: KAG7017165.1 (hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 222.2 bits (565), Expect = 2.2e-54 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of Carg20736 vs. NCBI nr
Match: XP_022929072.1 (uncharacterized protein LOC111435769 [Cucurbita moschata]) HSP 1 Score: 217.6 bits (553), Expect = 5.3e-53 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Carg20736 vs. NCBI nr
Match: XP_023551320.1 (uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.8 bits (543), Expect = 7.7e-52 Identity = 110/114 (96.49%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of Carg20736 vs. NCBI nr
Match: XP_022969943.1 (uncharacterized protein LOC111468990 [Cucurbita maxima]) HSP 1 Score: 210.3 bits (534), Expect = 8.5e-51 Identity = 108/113 (95.58%), Postives = 108/113 (95.58%), Query Frame = 0
BLAST of Carg20736 vs. NCBI nr
Match: KAG7017171.1 (hypothetical protein SDJN02_22283, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50 Identity = 110/116 (94.83%), Postives = 110/116 (94.83%), Query Frame = 0
BLAST of Carg20736 vs. ExPASy TrEMBL
Match: A0A6J1ELR2 (uncharacterized protein LOC111435769 OS=Cucurbita moschata OX=3662 GN=LOC111435769 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of Carg20736 vs. ExPASy TrEMBL
Match: A0A6J1I2E5 (uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.1e-51 Identity = 108/113 (95.58%), Postives = 108/113 (95.58%), Query Frame = 0
BLAST of Carg20736 vs. ExPASy TrEMBL
Match: A0A5A7ST27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00090 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.6e-25 Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of Carg20736 vs. ExPASy TrEMBL
Match: A0A0A0LL24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.6e-25 Identity = 75/119 (63.03%), Postives = 84/119 (70.59%), Query Frame = 0
BLAST of Carg20736 vs. ExPASy TrEMBL
Match: A0A1S3B4K9 (uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.6e-25 Identity = 75/119 (63.03%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of Carg20736 vs. TAIR 10
Match: AT2G44010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G59880.1); Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 7.5e-05 Identity = 39/117 (33.33%), Postives = 52/117 (44.44%), Query Frame = 0
BLAST of Carg20736 vs. TAIR 10
Match: AT3G59880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44010.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.7e-04 Identity = 38/126 (30.16%), Postives = 59/126 (46.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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