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Carg20735 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTAACCAATTTCAAAAGCTTCTTGAAGATCAGGCTTTTAGGAATAGCAATTCTTCGTGTGAGAATTTGTCAAAATCCCAAATGAGAGTATCATGGAGGGAAGGGTTAATGAGCCGGATCTACGAGATGGATGAGTTCGATAGTTGTCGTTGCCTATCAGACGACGAAGAAGAGAATGCTGACACTTGCAGCATTAACTTGTCAGATATCCTTAAGAAGACTCCTCTGAAACATAATGATTGTGAGGCTGATCCTATAATTTGCAACAGTTCTTGTTCTTCTCGATTATTAGTGAATGGGGAAGCCGAAGAATATGAGAAAAGTAATGAAGTAGCATGTTGTTGTGCGGAATCCATTAGCACGGATGGAGGTGGGTTGATGGCATCAGGGGACTCAGATTGGCATTTATGCTACAAAAATGGATTGTTTGATTGCTAA ATGGATCTTAACCAATTTCAAAAGCTTCTTGAAGATCAGGCTTTTAGGAATAGCAATTCTTCGTGTGAGAATTTGTCAAAATCCCAAATGAGAGTATCATGGAGGGAAGGGTTAATGAGCCGGATCTACGAGATGGATGAGTTCGATAGTTGTCGTTGCCTATCAGACGACGAAGAAGAGAATGCTGACACTTGCAGCATTAACTTGTCAGATATCCTTAAGAAGACTCCTCTGAAACATAATGATTGTGAGGCTGATCCTATAATTTGCAACAGTTCTTGTTCTTCTCGATTATTAGTGAATGGGGAAGCCGAAGAATATGAGAAAAGTAATGAAGTAGCATGTTGTTGTGCGGAATCCATTAGCACGGATGGAGGTGGGTTGATGGCATCAGGGGACTCAGATTGGCATTTATGCTACAAAAATGGATTGTTTGATTGCTAA ATGGATCTTAACCAATTTCAAAAGCTTCTTGAAGATCAGGCTTTTAGGAATAGCAATTCTTCGTGTGAGAATTTGTCAAAATCCCAAATGAGAGTATCATGGAGGGAAGGGTTAATGAGCCGGATCTACGAGATGGATGAGTTCGATAGTTGTCGTTGCCTATCAGACGACGAAGAAGAGAATGCTGACACTTGCAGCATTAACTTGTCAGATATCCTTAAGAAGACTCCTCTGAAACATAATGATTGTGAGGCTGATCCTATAATTTGCAACAGTTCTTGTTCTTCTCGATTATTAGTGAATGGGGAAGCCGAAGAATATGAGAAAAGTAATGAAGTAGCATGTTGTTGTGCGGAATCCATTAGCACGGATGGAGGTGGGTTGATGGCATCAGGGGACTCAGATTGGCATTTATGCTACAAAAATGGATTGTTTGATTGCTAA MDLNQFQKLLEDQAFRNSNSSCENLSKSQMRVSWREGLMSRIYEMDEFDSCRCLSDDEEENADTCSINLSDILKKTPLKHNDCEADPIICNSSCSSRLLVNGEAEEYEKSNEVACCCAESISTDGGGLMASGDSDWHLCYKNGLFDC Homology
BLAST of Carg20735 vs. NCBI nr
Match: KAG7017166.1 (hypothetical protein SDJN02_22278, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 307.8 bits (787), Expect = 5.2e-80 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Carg20735 vs. NCBI nr
Match: XP_022928860.1 (uncharacterized protein LOC111435650 [Cucurbita moschata] >XP_022928861.1 uncharacterized protein LOC111435650 [Cucurbita moschata] >XP_022928862.1 uncharacterized protein LOC111435650 [Cucurbita moschata]) HSP 1 Score: 304.7 bits (779), Expect = 4.4e-79 Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Carg20735 vs. NCBI nr
Match: XP_023550090.1 (uncharacterized protein LOC111808388 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 301.6 bits (771), Expect = 3.7e-78 Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Carg20735 vs. NCBI nr
Match: XP_022969790.1 (uncharacterized protein LOC111468888 [Cucurbita maxima] >XP_022969792.1 uncharacterized protein LOC111468888 [Cucurbita maxima] >XP_022969793.1 uncharacterized protein LOC111468888 [Cucurbita maxima]) HSP 1 Score: 300.8 bits (769), Expect = 6.3e-78 Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Carg20735 vs. NCBI nr
Match: KAG7017172.1 (hypothetical protein SDJN02_22284, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 300.4 bits (768), Expect = 8.3e-78 Identity = 144/147 (97.96%), Postives = 145/147 (98.64%), Query Frame = 0
BLAST of Carg20735 vs. ExPASy TrEMBL
Match: A0A6J1ELH1 (uncharacterized protein LOC111435650 OS=Cucurbita moschata OX=3662 GN=LOC111435650 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 2.1e-79 Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Carg20735 vs. ExPASy TrEMBL
Match: A0A6J1I200 (uncharacterized protein LOC111468888 OS=Cucurbita maxima OX=3661 GN=LOC111468888 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78 Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Carg20735 vs. ExPASy TrEMBL
Match: A0A0A0LHN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G122530 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57 Identity = 115/151 (76.16%), Postives = 133/151 (88.08%), Query Frame = 0
BLAST of Carg20735 vs. ExPASy TrEMBL
Match: A0A5D3BQU9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00970 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 9.0e-54 Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 0
BLAST of Carg20735 vs. ExPASy TrEMBL
Match: A0A1S4E1G9 (uncharacterized protein LOC103496888 OS=Cucumis melo OX=3656 GN=LOC103496888 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 9.0e-54 Identity = 112/151 (74.17%), Postives = 129/151 (85.43%), Query Frame = 0
BLAST of Carg20735 vs. TAIR 10
Match: AT2G43990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; Has 1419 Blast hits to 494 proteins in 144 species: Archae - 0; Bacteria - 300; Metazoa - 246; Fungi - 102; Plants - 31; Viruses - 2; Other Eukaryotes - 738 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 20/28 (71.43%), Postives = 22/28 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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