Carg20631 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20631
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
LocationCarg_Chr13: 552890 .. 556877 (-)
RNA-Seq ExpressionCarg20631
SyntenyCarg20631
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATGAGGAAATTTCCAAAAGAAAAATTCCCAAATAAGATCTTTGTTAAACTAATTGGAAAGAGGCGGCTTCTCTTTCTTTTCTTTTCCCCAAGGATGATGGCACATGGGTGACAAAGCAGTAGCCATCGCCTTCTTCTTATAAATAGTGAGTTGAGGAGTCAATTTAGACATATCTCATTCTTAGCAGCTTAGCTCATTAGTAGAGATCCTTACAAGCATAGTTTCTTGCTTTCATTTCTTACTCTGCTGATTTCTTTCAATAGGGTGTGGTGGAAAAGGAGAGTAATTTTGTTTGGTAAGAAGGAAAGATTGAGAGAAAATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCCTTCTCCACAGAAGGTAATGCTCCTCTCTACGTAGAACTTTCTTTCTCCTTTCCAAATTGGTTTAGATTTTGCTGCATAATGTTAAGAGGAGGCTTTTTGAAACTCATGTGGCATTTTATAAAGTTCGTTGCTTAAGGGGTCCCCCTGTTATTTGCCTATTAGCAATGATATATTTTTGTCCTGAATTTCCTACTTCGACTGCTATTGCAAGTTTTGTTGCAGGAATCTCATGTAAAGTTTTAATTGCAAACCTTCAAAGTTATTCCATTTTAATTCTTACGTTTTGATCTTTAAACTTTTTATAAATCTTCATCAATTGTTTTAGTTATATTTAGCAGAAATCTTCGGCAGTCTGTCTCCATTTTTGGTATCAAACTCAAGATACGTGACACGGAATTCGAGTCCGCATTTTTACTCAAATATAATATGAAAATATATCTTTCTTCAGTCTTGGACAATGATTCTTGGCCACTTCCGTCTAAGAGAATCTCATCCTCAGTCTTTACTGAGTCTGATATCAATGGCGTATGCGCTTGAATCAGCATGTCCTTGTACGAATAAATAGTCTTTAGAAAGACGCCTCTCTTTTTCTTGTTTTATTGTTATTGTTTTGAAGAACGGAAAGATTAACTAATTGAGCTTGCGATCACAACCGCCATAGGCTAGGGAGAAAGACAACCAAAGAACGGCTGGGGCCATAAAATGGCATAGGACTAAAATGAACTTTTATTTAAAGGTCAAAAATAAAATAGGACGTTCAAACTAAAGGAGTGCTCATGACGACTAGAATAAGATTATTCCTTCTGTGAGTCATTGTCAAATCATCACGTTTATTTAACTATTATTTTCTAATTTTCAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGTGTGTGAATTGAAGTATCAATCCCGTTAAAATAAAAGGACAGGGATATGCAAATTCACAAACCACAGGGATGGATTGTTTGAAACCTTTTTAAGAATATATGAGTATATCATTTACAGAAGATAAAGAGTATAATTTGTAACTATTTTTAAGAATATAATCCTCAATTTTAGCCGTTCTCAAGAAAAAAGAAATTGAGTTATGCCTAACAAAAACAAGATCTGATCATTTCAAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTGTGAGTATACTTTGTTGATCAATTTGGATCAATGTCAAAGATGTGTGCTCTCTGCTGGAACTTTTACGATTTTATCAGACCAAACGAAAACTGATTGTTCTTCTCATGTTGTTGCGATTTCGTTGATGACCCAGTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTACAGATAAAGTAATGGACGAAGTTGTTGGAATCTGTTGACTCATCCGTTTTAGTCTCTGATTTCAAATACTTTTTGTAGGTTCTCTTTATTATTAGGACGACTGCCTTGCCTTGGTGGCGCATGAATTCCCTCCTATTTTCCAAGGTATGATGTCATTTTTTCAGCATAAATGTATATTTCGAAGCTTTTTTGTTAGTTACAATAAGTTAGAGTGAATTCGAGAGGCTTATTCGATGTTGCTGCGTTTACTTACATTCGTGGTTGAAGTTTCCTTGGAATATTAGAATCCACAGTCAGTGACATTAGTTGTGTGAAAGTGAAATATCAAACTGAGATTGATTTGACTAAGAATATGGTCGAACAAGAGACTTTTCTTTCTCAGTCAGAAGTTGATTCACAATCACTTTCTTTATATTTAGTAATGATCCTTGTGCTAGAACCATAGAGAATTCTATTGGAACCAACGTTTAACTTCCATCGTCCATGTCTTTTCACACACCTGATACCAAGAAGCTTAGAAGCTGCTTCCTTGTGAACCCACTAATAATATAACCATACAAATAGGAAATTTCAAACATTTAGTCAAATCATCATTTAATCCGTATTTTTTTATTTGTTTGTTTAAATATTATTTTAGTCCCTATATTTTTTTTGCGTTTGTTCATTTTGGTCCTTAAATTTTCAAAATGTTCGAATATTACGTGGGTCCCTGTATTCTCACATTTGGATTATTTTATAATCTCATATATTAAATAGTTTCCATTGTTTGGTAACTCTATTTTTCCATTAAAACATTGTTTGGTAACTCTGTTGTTTCTTAATCCTAATTGATTTGTGTTAAGAAACTGGGGTATAACAACATTTTTGTCAATTCAAGTAGAACTCAATAGATTAAGCCTCAATTACTATTCTAAAGGTCGATGGTTCGGTTCTCGACTCCCGGAATCGTTAAACTCAAAAAAGTAAAAGTTAGTTCTTTACTTGCTCCCTGTCATAGAGAAGCATGGAATTTTGCTAGTTTCTCCCACTCTCCCAACCGTTTATCTGGCCTTCTTTCCAACCATATATTCTTTAGGGTTTGATTTATAATAGCAGTGGCCAATAGAATCTTTGCTTTCCACTTTCAAGGATGGCTGCAAAGCATTTGAACCATACTTCCATCCTAAGGGAAGTGGAAAGTCCCTGAAATAATCCAACATTTATACGACAGAGAGAGACCAAATCTTCATGCTATTAGGAAAAAAGAATTAAAAAAATGATCCATATCTTTGTTTCTACAATTATATACAGATTTCAGGGAGAATAAAGAAAAAGGAAGATTTTTTATATTTCCTGTTTTTCGATTCTTAAGAACATTACCAAAAAAGCACATTTCCTAGAACTTGTAAAATTAAGAATTCTTAGATGGATTGCTTCTTAAGAATTCATTTTAGGTAAAACTTATCTCTTGTAGTTTGGCCTGTTTACCAGTTTGGTTGATCCGTTTCATTCTTTTAGCTGCTTTGATCGGCACAATTACTATGGTTATTTGATGGAGTTTAGCTGTGTGGGTTGAGAGGGGATAATTTGTATCGAATGCCCAATTTTGGGTTTGGTCGGTTTTACTTGGTTCCCTATCATTTCTTAGATCTTTTAAATGTATTAACAGATTAGAAAAAAGCTTAGATGGCATGATGATTTTGAGTTGTTTGCTTCTTAAGAATTCATTATAAGTAAAACTTTCATCTCTCATGGTGGTTTGACCTATTCATCAGTTTGGTCGATCCGTTCATTCTTTTAGCTGCTTTAATCGACACAACTGCCATAGCCAGCGATGCTAGTTAAAATTCTCTAGTTATGCGATGGAGTTGAGCTGTGTGGGTTGTGGGAGGGGATAATTTGTATCAAATCCCAACTTCGGGTTTGGTCGGTTTGGTCGGGTTTACTTGGTTCCCCTGTCACATACATTTCTATTCATCACATACATTTTTTTTTGGTGCAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAATTAA

mRNA sequence

GAATGAGGAAATTTCCAAAAGAAAAATTCCCAAATAAGATCTTTGTTAAACTAATTGGAAAGAGGCGGCTTCTCTTTCTTTTCTTTTCCCCAAGGATGATGGCACATGGGTGACAAAGCAGTAGCCATCGCCTTCTTCTTATAAATAGGTGTGGTGGAAAAGGAGAGTAATTTTGTTTGGTAAGAAGGAAAGATTGAGAGAAAATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCCTTCTCCACAGAAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTGTGAACCAAACGAAAACTGATTGTTCTTCTCATGTTGTTGCGATTTCGTTGATGACCCAGTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTACAGATAAAGACGACTGCCTTGCCTTGGTGGCGCATGAATTCCCTCCTATTTTCCAAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAATTAA

Coding sequence (CDS)

ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCTGATCTTTTCGATGTCAAGGAGCCGCCATCAACTTCTTCATCAGAAGTCTTTGCAGCAATCTTTCCTTCTCCACAGAAGGGGGGAGGCAGGAATTCTTCTAGCTCTGGGGATTGGCTAAAACAGGCCAATGGAAATCAACCATCCCACGCCAGACAAGGAAATTCAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGAGGACAAGATGGTTACTCCCAGGCCCCATCAGCTGGACTATCCCCATCCCCTGCCCCCACTGTGAACCAAACGAAAACTGATTGTTCTTCTCATGTTGTTGCGATTTCGTTGATGACCCAGTTGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTTCCAACCTGCTTCTAGGGGAAATTGGTGGCAAGGTACAGATAAAGACGACTGCCTTGCCTTGGTGGCGCATGAATTCCCTCCTATTTTCCAAGGAATTCATAACGAAGCTGCGCAGTGGAGCTTTGAGTTGGATTTACGTTACATTGTGTATACCATTTCAAATTAA

Protein sequence

MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVAISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQWSFELDLRYIVYTISN
Homology
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BLAST of Carg20631 vs. NCBI nr
Match: KAG7019166.1 (hypothetical protein SDJN02_18124 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.3 bits (1022), Expect = 3.9e-107
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120

Query: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQW 180
           ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQW
Sbjct: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQW 180

Query: 181 SFELDLRYIVYTISN 196
           SFELDLRYIVYTISN
Sbjct: 181 SFELDLRYIVYTISN 195

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BLAST of Carg20631 vs. NCBI nr
Match: KAG6583402.1 (hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.8 bits (891), Expect = 6.0e-92
Identity = 175/195 (89.74%), Postives = 175/195 (89.74%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPT              
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPT-------------- 120

Query: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQW 180
                 LKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQW
Sbjct: 121 ------LKKSGGEDDPNGNNFQPASRGNWWQGTDKDDCLALVAHEFPPIFQGIHNEAAQW 175

Query: 181 SFELDLRYIVYTISN 196
           SFELDLRYIVYTISN
Sbjct: 181 SFELDLRYIVYTISN 175

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BLAST of Carg20631 vs. NCBI nr
Match: XP_022964980.1 (uncharacterized protein LOC111464929 [Cucurbita moschata] >XP_022964981.1 uncharacterized protein LOC111464929 [Cucurbita moschata] >XP_022964982.1 uncharacterized protein LOC111464929 [Cucurbita moschata])

HSP 1 Score: 256.1 bits (653), Expect = 2.4e-64
Identity = 132/153 (86.27%), Postives = 133/153 (86.93%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPT              
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPT-------------- 120

Query: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGT 154
                 LKKSGGEDDPNGNNFQPASRGNWWQG+
Sbjct: 121 ------LKKSGGEDDPNGNNFQPASRGNWWQGS 133

[Close]
BLAST of Carg20631 vs. NCBI nr
Match: XP_022970583.1 (uncharacterized protein LOC111469517 [Cucurbita maxima] >XP_023519303.1 uncharacterized protein LOC111782742 [Cucurbita pepo subsp. pepo] >XP_023519304.1 uncharacterized protein LOC111782742 [Cucurbita pepo subsp. pepo] >XP_023519305.1 uncharacterized protein LOC111782742 [Cucurbita pepo subsp. pepo] >XP_023521040.1 uncharacterized protein LOC111784637 [Cucurbita pepo subsp. pepo] >XP_023521041.1 uncharacterized protein LOC111784637 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63
Identity = 131/153 (85.62%), Postives = 132/153 (86.27%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SPSPAPT              
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPAPT-------------- 120

Query: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGT 154
                 LKKSGGEDDPNGNNFQPASRGNWWQG+
Sbjct: 121 ------LKKSGGEDDPNGNNFQPASRGNWWQGS 133

[Close]
BLAST of Carg20631 vs. NCBI nr
Match: XP_038894691.1 (uncharacterized protein LOC120083160 [Benincasa hispida] >XP_038894692.1 uncharacterized protein LOC120083160 [Benincasa hispida] >XP_038894693.1 uncharacterized protein LOC120083160 [Benincasa hispida])

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 116/153 (75.82%), Postives = 120/153 (78.43%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIF SPQKG GRNSSSSGDWLKQ NGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPLSSTSGVFAAIFSSPQKGRGRNSSSSGDWLKQTNGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QP H RQGNS GSLEPCHLSSSLYYGGQDGYSQAPSAG SP   PT              
Sbjct: 61  QPRHTRQGNS-GSLEPCHLSSSLYYGGQDGYSQAPSAGPSPPSPPT-------------- 120

Query: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGT 154
                 +KKSGGEDDPNGNN QPASRGNWWQG+
Sbjct: 121 ------MKKSGGEDDPNGNNSQPASRGNWWQGS 132

[Close]
BLAST of Carg20631 vs. ExPASy TrEMBL
Match: A0A6J1HJ44 (uncharacterized protein LOC111464929 OS=Cucurbita moschata OX=3662 GN=LOC111464929 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.1e-64
Identity = 132/153 (86.27%), Postives = 133/153 (86.93%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPT              
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPT-------------- 120

Query: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGT 154
                 LKKSGGEDDPNGNNFQPASRGNWWQG+
Sbjct: 121 ------LKKSGGEDDPNGNNFQPASRGNWWQGS 133

[Close]
BLAST of Carg20631 vs. ExPASy TrEMBL
Match: A0A6J1I4B7 (uncharacterized protein LOC111469517 OS=Cucurbita maxima OX=3661 GN=LOC111469517 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.4e-64
Identity = 131/153 (85.62%), Postives = 132/153 (86.27%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SPSPAPT              
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPAPT-------------- 120

Query: 121 ISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGT 154
                 LKKSGGEDDPNGNNFQPASRGNWWQG+
Sbjct: 121 ------LKKSGGEDDPNGNNFQPASRGNWWQGS 133

[Close]
BLAST of Carg20631 vs. ExPASy TrEMBL
Match: A0A5D3BEB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001770 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 5.5e-51
Identity = 112/154 (72.73%), Postives = 117/154 (75.97%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQ SSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NGN
Sbjct: 1   MEGKSKGYQTSSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SP P P               
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPLPPPP-------------- 120

Query: 121 ISLMTQLKKSGG-EDDPNGNNFQPASRGNWWQGT 154
                 +KKSGG +DDPNGNN QPASRGNWWQG+
Sbjct: 121 ----HTMKKSGGQQDDPNGNNSQPASRGNWWQGS 136

[Close]
BLAST of Carg20631 vs. ExPASy TrEMBL
Match: A0A1S3C5M6 (uncharacterized protein LOC103497123 OS=Cucumis melo OX=3656 GN=LOC103497123 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 5.5e-51
Identity = 112/154 (72.73%), Postives = 117/154 (75.97%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQ SSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NGN
Sbjct: 1   MEGKSKGYQTSSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGN 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SP P P               
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPLPPPP-------------- 120

Query: 121 ISLMTQLKKSGG-EDDPNGNNFQPASRGNWWQGT 154
                 +KKSGG +DDPNGNN QPASRGNWWQG+
Sbjct: 121 ----HTMKKSGGQQDDPNGNNSQPASRGNWWQGS 136

[Close]
BLAST of Carg20631 vs. ExPASy TrEMBL
Match: A0A0A0LXG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525300 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.1e-50
Identity = 111/154 (72.08%), Postives = 117/154 (75.97%), Query Frame = 0 

Query: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60
           MEGKSKGYQASSFVADLFDVKE P +S+S  FA IFPSPQKG GRNSSSS DWLKQ NG+
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGS 60

Query: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVA 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQA SAG SP P P               
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQATSAGPSPLPPPP-------------- 120

Query: 121 ISLMTQLKKSGG-EDDPNGNNFQPASRGNWWQGT 154
                 +KKSGG +DDPNGNN QPASRGNWWQG+
Sbjct: 121 ----HTMKKSGGQQDDPNGNNSQPASRGNWWQGS 136

[Close]
BLAST of Carg20631 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-19
Identity = 65/158 (41.14%), Postives = 86/158 (54.43%), Query Frame = 0 

Query: 1   MEGK----SKGYQASSFVADLFDVKEP-PSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLK 60
           MEGK    S    +SSF A+LF  K+P P +SSS +F+ +FP P KG  R+ S+S     
Sbjct: 1   MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPSKGSARDGSNSKHG-S 60

Query: 61  QANGNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCS 120
           QA   +  +A++      +EPCHLSSSLYYGGQD Y+++           T NQT     
Sbjct: 61  QAQRRESLNAQEDR----VEPCHLSSSLYYGGQDVYARS-----------TTNQTYPPVK 120

Query: 121 SHVVAISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGT 154
           +           ++  GEDD NG N Q  SRGNWWQG+
Sbjct: 121 ND----------RRRSGEDDANGQNPQDVSRGNWWQGS 132

[Close]
BLAST of Carg20631 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 68.2 bits (165), Expect = 8.5e-12
Identity = 62/175 (35.43%), Postives = 80/175 (45.71%), Query Frame = 0 

Query: 1   MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----S 60
           MEG+ K         +SS  ++LF  +E PS+ SSS +  +IFP P K  GR S      
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query: 61  SSGDW---LKQANGNQPSHARQGNSGGS-------LEPCHLSSSLYYGGQDGYSQAPSAG 120
           + G W     +  GN   +  Q  + GS       ++PCHLSSS+YYGG D Y Q  ++ 
Sbjct: 61  TGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQPQNS- 120

Query: 121 LSPSPAPTVNQTKTDCSSHVVAISLMTQLKKSGGEDDPNGNNFQPASRGNWWQGT 154
                  T N T                 KK GGEDD        ASRGNWWQG+
Sbjct: 121 -------TSNSTN----------------KKDGGEDDSGS-----ASRGNWWQGS 146

[Close]
BLAST of Carg20631 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 51.6 bits (122), Expect = 8.3e-07
Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = 0 

Query: 1   MEGKSK------GYQASSFVADLFDVKEPPST-SSSEVFAAIFPSPQKGGGRNS-----S 60
           MEG+ K         +SS  ++LF  +E PS+ SSS +  +IFP P K  GR S      
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query: 61  SSGDW---LKQANGNQPSHARQGNSGGS-------LEPCHLSSSLYYGGQDGYSQ 94
           + G W     +  GN   +  Q  + GS       ++PCHLSSS+YYGG D Y Q
Sbjct: 61  TGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQ 115

[Close]
BLAST of Carg20631 vs. TAIR 10
Match: AT3G46880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59080.1); Has 51 Blast hits to 51 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-06
Identity = 43/94 (45.74%), Postives = 49/94 (52.13%), Query Frame = 0 

Query: 1  MEGKSK--GYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQAN 60
          MEGK +     +SSF A LF  KEP   SSS  F +IFP P KG  RN  SS       +
Sbjct: 1  MEGKGRVGSSSSSSFTAQLFGPKEP---SSSANFNSIFP-PSKGTARNILSS------KH 60

Query: 61 GNQPSHARQGNSGGSLEPCHLSSSLYYGGQDGYS 93
          G+       G        C+LSSSLYYGGQD YS
Sbjct: 61 GSLEQRKEAGT-------CNLSSSLYYGGQDVYS 77

[Close]
BLAST of Carg20631 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 42/140 (30.00%), Postives = 57/140 (40.71%), Query Frame = 0 

Query: 25  STSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGNQPSHARQGNSGGSLE--------- 84
           S+S++ +F +IFP P      N +S     K    N  +   +G    + E         
Sbjct: 31  SSSTTGLFKSIFPPPSAVTQGNLTSRNGAAKYQPTNFETPNERGERSKNKERKSYQSEET 90

Query: 85  --PCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTVNQTKTDCSSHVVAISLMTQLKKSGGE 144
             PC+LSSS+YYGGQD YS               + T  D              KK G E
Sbjct: 91  QPPCNLSSSIYYGGQDNYSS--------------STTNPDA------------YKKDGEE 139

Query: 145 DDPNGNNFQPASRGNWWQGT 154
            D      + ASRGNWW+G+
Sbjct: 151 GDS-----ESASRGNWWEGS 139

The following BLAST results are available for this feature:
BLAST of Carg20631 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019166.13.9e-107100.00hypothetical protein SDJN02_18124 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6583402.16.0e-9289.74hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022964980.12.4e-6486.27uncharacterized protein LOC111464929 [Cucurbita moschata] >XP_022964981.1 unchar... [more]
XP_022970583.11.5e-6385.62uncharacterized protein LOC111469517 [Cucurbita maxima] >XP_023519303.1 uncharac... [more]
XP_038894691.11.2e-5275.82uncharacterized protein LOC120083160 [Benincasa hispida] >XP_038894692.1 unchara... [more]
BLAST of Carg20631 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg20631 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HJ441.1e-6486.27uncharacterized protein LOC111464929 OS=Cucurbita moschata OX=3662 GN=LOC1114649... [more]
A0A6J1I4B77.4e-6485.62uncharacterized protein LOC111469517 OS=Cucurbita maxima OX=3661 GN=LOC111469517... [more]
A0A5D3BEB75.5e-5172.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C5M65.5e-5172.73uncharacterized protein LOC103497123 OS=Cucumis melo OX=3656 GN=LOC103497123 PE=... [more]
A0A0A0LXG96.1e-5072.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525300 PE=4 SV=1[more]
BLAST of Carg20631 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G59080.12.5e-1941.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT5G02020.18.5e-1235.43Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric... [more]
AT5G02020.28.3e-0737.39Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric... [more]
AT3G46880.14.1e-0645.74unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G39855.21.7e-0430.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..148
NoneNo IPR availablePANTHERPTHR33738EMB|CAB82975.1coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20631-RACarg20631-RAmRNA