Carg20198 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGGGTAAGATTTGATTGTATATGTTTCTATACGATTATTTTATAAATGTTTTCAAAAATATTTATGAAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGATCCCATTTGAGTCTTCTGCGCCTTTGTGGGTTTTCAAGAATATGAGGGGCTTTTCTCTTCCTCCAACTTTTCGGTCAGTTTCATTGTTATATGATGTCAGTTGTACAGCACTGTGACACTAAGACAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCCATTGTGTTGTGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCGGCCTATGCAGCTGCTTTTAAGGTAATACCTCCTCCTTCCTTCATATCAACTGTTTGCTATCTCATCTTTGTGGAAGATGGATTTTGGGTTATGATTATTGTTTCAGAATGTAAGGCCTAGTGCAGACAATCTTCCTGAGGAACTGGCTATCCTTCTAACATCTTGTTGGCAAGAGGATGCAAATGCACGTCCAAACTTCACCCAAATCATCCAAATGCTACTCACTTACTTTTACACCATTGCACCCCCCGAGCCGATGATTCCTTCCCGAGTTTTCACTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGGTACGATTCGGGGGACACTCAAAAAGCTAAAATGGAAAATAAGGCCAGAGGTTGTTTCTTCTGCTCCACTGATTGTTACTAA ATGGTAGGCACTGTGACACTAAGACAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCCATTGTGTTGTGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCGGCCTATGCAGCTGCTTTTAAGAATGTAAGGCCTAGTGCAGACAATCTTCCTGAGGAACTGGCTATCCTTCTAACATCTTGTTGGCAAGAGGATGCAAATGCACGTCCAAACTTCACCCAAATCATCCAAATGCTACTCACTTACTTTTACACCATTGCACCCCCCGAGCCGATGATTCCTTCCCGAGTTTTCACTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGGTACGATTCGGGGGACACTCAAAAAGCTAAAATGGAAAATAAGGCCAGAGGTTGTTTCTTCTGCTCCACTGATTGTTACTAA ATGGTAGGCACTGTGACACTAAGACAAGGGGAGAAGAAACATTACAACCATAAAGTGGATGCCTATAGCTTTGCCATTGTGTTGTGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCGGCCTATGCAGCTGCTTTTAAGAATGTAAGGCCTAGTGCAGACAATCTTCCTGAGGAACTGGCTATCCTTCTAACATCTTGTTGGCAAGAGGATGCAAATGCACGTCCAAACTTCACCCAAATCATCCAAATGCTACTCACTTACTTTTACACCATTGCACCCCCCGAGCCGATGATTCCTTCCCGAGTTTTCACTTCTGAGAACACGGTGTTTCCTCCCGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGGTACGATTCGGGGGACACTCAAAAAGCTAAAATGGAAAATAAGGCCAGAGGTTGTTTCTTCTGCTCCACTGATTGTTACTAA MVGTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSADNLPEELAILLTSCWQEDANARPNFTQIIQMLLTYFYTIAPPEPMIPSRVFTSENTVFPPESPGTSSLMAVRYDSGDTQKAKMENKARGCFFCSTDCY Homology
BLAST of Carg20198 vs. NCBI nr
Match: KAG7021424.1 (Serine/threonine-protein kinase STY17, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 327.0 bits (837), Expect = 8.8e-86 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of Carg20198 vs. NCBI nr
Match: KAG6587442.1 (Serine/threonine-protein kinase STY46, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 321.6 bits (823), Expect = 3.7e-84 Identity = 154/157 (98.09%), Postives = 155/157 (98.73%), Query Frame = 0
BLAST of Carg20198 vs. NCBI nr
Match: XP_008464507.1 (PREDICTED: serine/threonine-protein kinase HT1 [Cucumis melo] >XP_008464508.1 PREDICTED: serine/threonine-protein kinase HT1 [Cucumis melo] >XP_011654301.1 serine/threonine-protein kinase STY13 [Cucumis sativus] >XP_031737950.1 serine/threonine-protein kinase STY13 [Cucumis sativus] >KAA0057817.1 serine/threonine-protein kinase HT1-like [Cucumis melo var. makuwa] >KGN63533.1 hypothetical protein Csa_013773 [Cucumis sativus] >TYJ98501.1 serine/threonine-protein kinase HT1-like [Cucumis melo var. makuwa]) HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77 Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg20198 vs. NCBI nr
Match: XP_038880293.1 (serine/threonine-protein kinase STY13-like isoform X1 [Benincasa hispida]) HSP 1 Score: 297.4 bits (760), Expect = 7.5e-77 Identity = 140/157 (89.17%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg20198 vs. NCBI nr
Match: XP_038880294.1 (serine/threonine-protein kinase STY13-like isoform X2 [Benincasa hispida]) HSP 1 Score: 297.4 bits (760), Expect = 7.5e-77 Identity = 140/157 (89.17%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy Swiss-Prot
Match: Q2MHE4 (Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14 Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy Swiss-Prot
Match: Q8RWL6 (Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14 Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy Swiss-Prot
Match: F4JTP5 (Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy Swiss-Prot
Match: Q54I36 (Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum OX=44689 GN=pyk3 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy Swiss-Prot
Match: Q9ZQ31 (Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy TrEMBL
Match: A0A1S3CN64 (serine/threonine-protein kinase HT1 OS=Cucumis melo OX=3656 GN=LOC103502370 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77 Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy TrEMBL
Match: A0A5D3BII5 (Serine/threonine-protein kinase HT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001040 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77 Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy TrEMBL
Match: A0A0A0LP20 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G003510 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77 Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy TrEMBL
Match: A0A6J1C2B7 (serine/threonine-protein kinase HT1 OS=Momordica charantia OX=3673 GN=LOC111007297 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 6.8e-76 Identity = 140/157 (89.17%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of Carg20198 vs. ExPASy TrEMBL
Match: A0A6J1JIV9 (serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC111484853 PE=3 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.4e-73 Identity = 136/157 (86.62%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of Carg20198 vs. TAIR 10
Match: AT5G50180.1 (Protein kinase superfamily protein ) HSP 1 Score: 231.5 bits (589), Expect = 4.7e-61 Identity = 109/157 (69.43%), Postives = 125/157 (79.62%), Query Frame = 0
BLAST of Carg20198 vs. TAIR 10
Match: AT5G40540.1 (Protein kinase superfamily protein ) HSP 1 Score: 213.8 bits (543), Expect = 1.0e-55 Identity = 108/154 (70.13%), Postives = 124/154 (80.52%), Query Frame = 0
BLAST of Carg20198 vs. TAIR 10
Match: AT3G27560.1 (Protein kinase superfamily protein ) HSP 1 Score: 201.1 bits (510), Expect = 6.8e-52 Identity = 102/159 (64.15%), Postives = 123/159 (77.36%), Query Frame = 0
BLAST of Carg20198 vs. TAIR 10
Match: AT5G01850.1 (Protein kinase superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 3.2e-33 Identity = 65/104 (62.50%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of Carg20198 vs. TAIR 10
Match: AT5G66710.1 (Protein kinase superfamily protein ) HSP 1 Score: 110.2 bits (274), Expect = 1.6e-24 Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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