Carg19817 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCCTCTCTTTGAAGCTTTTTTTTCTTGTTCTGCAACATTTCTTTCAAGTTTCAATTTAGTGGGGTTGAAGGAACTCCTGCTCTGCTGCTTGTTTCGCACTCATCGGGGATCTAATTTCAATAAGATTTTTCCACCTCTGTTCTAATTCTTCCAATTTACTCCATTCCCAATGTTATCTTCACTTCATACCACTCGATTCGCAAACCAGACGGATTGAATCTAAATTTCGAGTCAGAAATGGAGAATTACATTGGAAAAAGGAAACCCACCATCGGCCTTTCGCTCTTCACCGCCTTCTCCGCTTCTTTCTCTTCTGATAAAGCGAAATCCCCTCGCGATTTCGAGAACGGCGTTGTTGGGTTGGGCATAGTTGCTGCCATGACTGATTCCCACAAATTTCATGAACCTTTTGTGTCTTCCAAAGCGGTTTCTCCTAGGTCCTGCTCGATTCCCATCGTTTCTTCTGCTAAACCAGCCGCTAATTTCAGAGGTGGCCTTAACCTAGAAAAGGAACAACACGAGGTTGTTGATGAACTTTCTGAAAGTTACACTTGCGTAACTTCACATTTTGGTAATCATGTGATTGAAAAGCGTGTTTTCTTTAACGGTGAGCTTGAAATGGTTAATGGCCGCTCTTCCAATATGGTGACATATGGGGTTTTTTCCACTTCCCCCATGAGTTTTGGTGTAGCGGAGAGAGGGATTTTTGCTGCTGAATTTTTAAGCTCTTGTCATCTCTGCTGCAAGCATCTTCATGGGCTTGACATCTTCATGTACAGGTAAATTTCAGTTCTGCTCCCTTTTCTCCCCTGTCTTGATTTTATTTGATCATCTTTTATTAGTTAATTTTTAGACAATTGTAGCATGAAAACTTAGAGGGAGCGAGAAATTCAAGCCCAGTTACTTTGATTCCTATAAATTGTTGAGTCATGGTGCCTTGGAATGGAATCTTATACTGTAGAATCGTGATATTCTTTGGTTTCTTTGATGTTGTCAAGTCATGATTGTTGCTGCCTTGGTTGATTAGTTCATGACATAGGTAGAATAGATGATTTTGCTTTCTCTGTGAAGTTTTGGATCTGTGGTTCATTGATTTGCTCATTCTATTCGTTTATGAGATGCCTTTTTAGGAGCTGTTAAGAAAGCATCTAGTACCACGTTGCCTAGTTTGGGATTTTTCTTACCTGTTTCCATCCTTAGGACGATTTTCTTTTCGAAGTGGAAATTTTTGTTGAATTACACAATTTGTTTTAGATTCGATAAGCGCTTGGATCAGATCCCTGTTGCCGATATTTGTCAGCATGATTCGAGTTTCTTTTTCCTAGATTGATATGATTGAGTTTGGTTACTGTCTCCCTTGTTAGGTTAGATGGGTTATTTTAAAACTGTGCTCTGTTCTCATGAGAAATAAAGTATATACCGGCTTTCCCTTTCGGGGCTCCCCTCAAGGGTTTTAAAACGTGTTTGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATGTGAGATCTCACAATCCACCCCCTTCAGAGCCCAGTGTCCTTGCAGGCACTCGTTTTCCTCTCCAATCGATGTGGGATCTCCATATAGTCTCTTTTAAGCTTCAATTCTAAGAGTTTGGCTTTTTATCTCCTTTATTAACGAGGCGTTTTAAGTTAGCTACAAATACAACAGCAGACAGCTATTATGCCCTTGTCTGGACATTATATTAATCTTTGAATGGTATATGACTTGATCATCGTGGGACATTAATATTTGGCTCTTTCTTAAGCTACCTCTTCGATTATCGTCACTCGAATGGGTTGGCTTGATATCTGGACTGTTATGCTTTCCAATAATCATATAATTGCAGGCTTGTTATAGAGAAAGTATTCCTTATCTTCATGTTGTAATTGAGATATTTTTCAGCAGCTTGTTATTAAAAGCTTCTTGTCCTGTACTTTCATGTGGTTGAAATGAGATGAGATAACATGTGATTGGACATGAAACTTTAGCAAATTGGTTGGCTTTCATCCAAGATTCTCATGAACTTGGAATCTTCTTTTTCCCTTGAGAATGACTTTGCTGTTTTCATTCATGCAGAGGGGAAAAGGCATTTTGCAGTGTCGAGTGTCGCGACAAACACATCAGAGGCGACGATCGCAGGGAAAAGTGTGGATCGAAAGCCATGAAAGACTACTCGGCGTTGCCCTGCTCCGTGGCTGGTCCCCCTGCCTTGGCTTCTGGTGTGGTTGCAGCTTAGGTATAAAAATGTATGAATTATGAGTAAAGGATACCAAATAAACTGTTGGTAGCAGAGTTTGTAAGAATGATTATGTATGGGTTAAAGACTTGTTACAAATAAGATGGGTTTGTATGATAATTGTTTGGTTAATGGTATAAAAATGTATGAATTATGGGCAATATGATACAATATACTCTTAATTTTTATGGATAATATATGTAACTTATGTTAGGTTT TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCCTCTCTTTGAAGCTTTTTTTTCTTGTTCTGCAACATTTCTTTCAAGTTTCAATTTAGTGGGGTTGAAGGAACTCCTGCTCTGCTGCTTGTTTCGCACTCATCGGGGATCTAATTTCAATAAGATTTTTCCACCTCTGTTCTAATTCTTCCAATTTACTCCATTCCCAATGTTATCTTCACTTCATACCACTCGATTCGCAAACCAGACGGATTGAATCTAAATTTCGAGTCAGAAATGGAGAATTACATTGGAAAAAGGAAACCCACCATCGGCCTTTCGCTCTTCACCGCCTTCTCCGCTTCTTTCTCTTCTGATAAAGCGAAATCCCCTCGCGATTTCGAGAACGGCGTTGTTGGGTTGGGCATAGTTGCTGCCATGACTGATTCCCACAAATTTCATGAACCTTTTGTGTCTTCCAAAGCGGTTTCTCCTAGGTCCTGCTCGATTCCCATCGTTTCTTCTGCTAAACCAGCCGCTAATTTCAGAGGTGGCCTTAACCTAGAAAAGGAACAACACGAGGTTGTTGATGAACTTTCTGAAAGTTACACTTGCGTAACTTCACATTTTGGTAATCATGTGATTGAAAAGCGTGTTTTCTTTAACGGTGAGCTTGAAATGGTTAATGGCCGCTCTTCCAATATGGTGACATATGGGGTTTTTTCCACTTCCCCCATGAGTTTTGGTGTAGCGGAGAGAGGGATTTTTGCTGCTGAATTTTTAAGCTCTTGTCATCTCTGCTGCAAGCATCTTCATGGGCTTGACATCTTCATGTACAGAGGGGAAAAGGCATTTTGCAGTGTCGAGTGTCGCGACAAACACATCAGAGGCGACGATCGCAGGGAAAAGTGTGGATCGAAAGCCATGAAAGACTACTCGGCGTTGCCCTGCTCCGTGGCTGGTCCCCCTGCCTTGGCTTCTGGTGTGGTTGCAGCTTAGGTATAAAAATGTATGAATTATGAGTAAAGGATACCAAATAAACTGTTGGTAGCAGAGTTTGTAAGAATGATTATGTATGGGTTAAAGACTTGTTACAAATAAGATGGGTTTGTATGATAATTGTTTGGTTAATGGTATAAAAATGTATGAATTATGGGCAATATGATACAATATACTCTTAATTTTTATGGATAATATATGTAACTTATGTTAGGTTT ATGGAGAATTACATTGGAAAAAGGAAACCCACCATCGGCCTTTCGCTCTTCACCGCCTTCTCCGCTTCTTTCTCTTCTGATAAAGCGAAATCCCCTCGCGATTTCGAGAACGGCGTTGTTGGGTTGGGCATAGTTGCTGCCATGACTGATTCCCACAAATTTCATGAACCTTTTGTGTCTTCCAAAGCGGTTTCTCCTAGGTCCTGCTCGATTCCCATCGTTTCTTCTGCTAAACCAGCCGCTAATTTCAGAGGTGGCCTTAACCTAGAAAAGGAACAACACGAGGTTGTTGATGAACTTTCTGAAAGTTACACTTGCGTAACTTCACATTTTGGTAATCATGTGATTGAAAAGCGTGTTTTCTTTAACGGTGAGCTTGAAATGGTTAATGGCCGCTCTTCCAATATGGTGACATATGGGGTTTTTTCCACTTCCCCCATGAGTTTTGGTGTAGCGGAGAGAGGGATTTTTGCTGCTGAATTTTTAAGCTCTTGTCATCTCTGCTGCAAGCATCTTCATGGGCTTGACATCTTCATGTACAGAGGGGAAAAGGCATTTTGCAGTGTCGAGTGTCGCGACAAACACATCAGAGGCGACGATCGCAGGGAAAAGTGTGGATCGAAAGCCATGAAAGACTACTCGGCGTTGCCCTGCTCCGTGGCTGGTCCCCCTGCCTTGGCTTCTGGTGTGGTTGCAGCTTAG MENYIGKRKPTIGLSLFTAFSASFSSDKAKSPRDFENGVVGLGIVAAMTDSHKFHEPFVSSKAVSPRSCSIPIVSSAKPAANFRGGLNLEKEQHEVVDELSESYTCVTSHFGNHVIEKRVFFNGELEMVNGRSSNMVTYGVFSTSPMSFGVAERGIFAAEFLSSCHLCCKHLHGLDIFMYRGEKAFCSVECRDKHIRGDDRREKCGSKAMKDYSALPCSVAGPPALASGVVAA Homology
BLAST of Carg19817 vs. NCBI nr
Match: KAG6598913.1 (hypothetical protein SDJN03_08691, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 472.6 bits (1215), Expect = 1.9e-129 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Carg19817 vs. NCBI nr
Match: KAG7029867.1 (hypothetical protein SDJN02_08210 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 472.6 bits (1215), Expect = 1.9e-129 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Carg19817 vs. NCBI nr
Match: XP_022929765.1 (uncharacterized protein LOC111436254 [Cucurbita moschata]) HSP 1 Score: 468.4 bits (1204), Expect = 3.6e-128 Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of Carg19817 vs. NCBI nr
Match: XP_023545773.1 (uncharacterized protein LOC111805110 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-127 Identity = 228/233 (97.85%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of Carg19817 vs. NCBI nr
Match: XP_022996503.1 (uncharacterized protein LOC111491733 [Cucurbita maxima]) HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117 Identity = 217/233 (93.13%), Postives = 219/233 (93.99%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy Swiss-Prot
Match: Q8GYX2 (FCS-Like Zinc finger 14 OS=Arabidopsis thaliana OX=3702 GN=FLZ14 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18 Identity = 68/192 (35.42%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy Swiss-Prot
Match: Q8GRN0 (FCS-Like Zinc finger 13 OS=Arabidopsis thaliana OX=3702 GN=FLZ13 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11 Identity = 61/198 (30.81%), Postives = 89/198 (44.95%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy Swiss-Prot
Match: F4IE21 (FCS-Like Zinc finger 12 OS=Arabidopsis thaliana OX=3702 GN=FLZ12 PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 8.4e-11 Identity = 66/205 (32.20%), Postives = 90/205 (43.90%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy Swiss-Prot
Match: Q9LYE4 (FCS-Like Zinc finger 10 OS=Arabidopsis thaliana OX=3702 GN=FLZ10 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 42/110 (38.18%), Postives = 55/110 (50.00%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy TrEMBL
Match: A0A6J1EV82 (uncharacterized protein LOC111436254 OS=Cucurbita moschata OX=3662 GN=LOC111436254 PE=3 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 1.8e-128 Identity = 230/233 (98.71%), Postives = 232/233 (99.57%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy TrEMBL
Match: A0A6J1KAY0 (uncharacterized protein LOC111491733 OS=Cucurbita maxima OX=3661 GN=LOC111491733 PE=3 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117 Identity = 217/233 (93.13%), Postives = 219/233 (93.99%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy TrEMBL
Match: A0A5A7U287 (DUF581 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00180 PE=3 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110 Identity = 205/234 (87.61%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy TrEMBL
Match: A0A0A0LJE5 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070220 PE=3 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110 Identity = 205/234 (87.61%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of Carg19817 vs. ExPASy TrEMBL
Match: A0A1S3BP68 (uncharacterized protein LOC103492205 OS=Cucumis melo OX=3656 GN=LOC103492205 PE=3 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110 Identity = 205/234 (87.61%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of Carg19817 vs. TAIR 10
Match: AT5G20700.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 94.7 bits (234), Expect = 1.0e-19 Identity = 68/192 (35.42%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of Carg19817 vs. TAIR 10
Match: AT1G74940.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 71.6 bits (174), Expect = 9.2e-13 Identity = 61/198 (30.81%), Postives = 89/198 (44.95%), Query Frame = 0
BLAST of Carg19817 vs. TAIR 10
Match: AT1G19200.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 68.9 bits (167), Expect = 6.0e-12 Identity = 66/205 (32.20%), Postives = 90/205 (43.90%), Query Frame = 0
BLAST of Carg19817 vs. TAIR 10
Match: AT5G11460.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 42/110 (38.18%), Postives = 55/110 (50.00%), Query Frame = 0
BLAST of Carg19817 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 61.6 bits (148), Expect = 9.5e-10 Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|