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Carg19743 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCGGCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCGGATCTACGCCGGAGGAGTGGAGGAGAACTACTTCCGCCGCCGCCGCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAGTGA ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCGGCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCGGATCTACGCCGGAGGAGTGGAGGAGAACTACTTCCGCCGCCGCCGCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAGTGA ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCGGCTTCTCCATCTTTCAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCGGATCTACGCCGGAGGAGTGGAGGAGAACTACTTCCGCCGCCGCCGCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGGCAGTGA MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQLVRFRSQRILSCLTGQ Homology
BLAST of Carg19743 vs. NCBI nr
Match: KAG7017171.1 (hypothetical protein SDJN02_22283, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 227.3 bits (578), Expect = 7.0e-56 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Carg19743 vs. NCBI nr
Match: KAG6579722.1 (hypothetical protein SDJN03_24170, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55 Identity = 115/116 (99.14%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Carg19743 vs. NCBI nr
Match: XP_023551320.1 (uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.3 bits (547), Expect = 2.8e-52 Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Carg19743 vs. NCBI nr
Match: XP_022929072.1 (uncharacterized protein LOC111435769 [Cucurbita moschata]) HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50 Identity = 111/116 (95.69%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of Carg19743 vs. NCBI nr
Match: KAG7017165.1 (hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.0 bits (528), Expect = 4.4e-50 Identity = 110/116 (94.83%), Postives = 110/116 (94.83%), Query Frame = 0
BLAST of Carg19743 vs. ExPASy TrEMBL
Match: A0A6J1ELR2 (uncharacterized protein LOC111435769 OS=Cucurbita moschata OX=3662 GN=LOC111435769 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.6e-51 Identity = 111/116 (95.69%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of Carg19743 vs. ExPASy TrEMBL
Match: A0A6J1I2E5 (uncharacterized protein LOC111468990 OS=Cucurbita maxima OX=3661 GN=LOC111468990 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.4e-49 Identity = 109/117 (93.16%), Postives = 109/117 (93.16%), Query Frame = 0
BLAST of Carg19743 vs. ExPASy TrEMBL
Match: A0A0A0LL24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123040 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 3.4e-24 Identity = 77/123 (62.60%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of Carg19743 vs. ExPASy TrEMBL
Match: A0A5A7ST27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00090 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.6e-24 Identity = 73/119 (61.34%), Postives = 82/119 (68.91%), Query Frame = 0
BLAST of Carg19743 vs. ExPASy TrEMBL
Match: A0A1S3B4K9 (uncharacterized protein LOC103485749 OS=Cucumis melo OX=3656 GN=LOC103485749 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.6e-24 Identity = 73/119 (61.34%), Postives = 82/119 (68.91%), Query Frame = 0
BLAST of Carg19743 vs. TAIR 10
Match: AT3G59880.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44010.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 6.0e-05 Identity = 39/128 (30.47%), Postives = 62/128 (48.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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