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Carg19740 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGGTCCACCGTCGTCCAAGCAAGGGTGGTGGACGGAGCCTAGAAGTGATAGACGTGAGAAAACTGAGCGAAAACCAGGTGCATCTAAGCCAATCACGACGTCCGGCGGCGATGGATCCGTCGGCGGTGAAGCCACGCGTGGTGAAGACAGGGGAAGGGTCAAGAGGAGGTTCAGGGAATTCATGGTGGAAGAACCCGGAAATGAAGAGGCAACGACGTGTGGCGAAGTACAAGTTGTATACAGTGGAAGGGAGGGTAAAGGATTCCATAAAGAAAGGGATGAGATGGTTCAAAAGCAGGTGTAGCAGAATCGTGTATGGATTTTAA ATGGAAGGGGTCCACCGTCGTCCAAGCAAGGGTGGTGGACGGAGCCTAGAAGTGATAGACGTGAGAAAACTGAGCGAAAACCAGGTGCATCTAAGCCAATCACGACGTCCGGCGGCGATGGATCCGTCGGCGGTGAAGCCACGCGTGGTGAAGACAGGGGAAGGGTCAAGAGGAGGTTCAGGGAATTCATGGTGGAAGAACCCGGAAATGAAGAGGCAACGACGTGTGGCGAAGTACAAGTTGTATACAGTGGAAGGGAGGGTAAAGGATTCCATAAAGAAAGGGATGAGATGGTTCAAAAGCAGGTGTAGCAGAATCGTGTATGGATTTTAA ATGGAAGGGGTCCACCGTCGTCCAAGCAAGGGTGGTGGACGGAGCCTAGAAGTGATAGACGTGAGAAAACTGAGCGAAAACCAGGTGCATCTAAGCCAATCACGACGTCCGGCGGCGATGGATCCGTCGGCGGTGAAGCCACGCGTGGTGAAGACAGGGGAAGGGTCAAGAGGAGGTTCAGGGAATTCATGGTGGAAGAACCCGGAAATGAAGAGGCAACGACGTGTGGCGAAGTACAAGTTGTATACAGTGGAAGGGAGGGTAAAGGATTCCATAAAGAAAGGGATGAGATGGTTCAAAAGCAGGTGTAGCAGAATCGTGTATGGATTTTAA MEGVHRRPSKGGGRSLEVIDVRKLSENQVHLSQSRRPAAMDPSAVKPRVVKTGEGSRGGSGNSWWKNPEMKRQRRVAKYKLYTVEGRVKDSIKKGMRWFKSRCSRIVYGF Homology
BLAST of Carg19740 vs. NCBI nr
Match: KAG7017168.1 (hypothetical protein SDJN02_22280, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Carg19740 vs. NCBI nr
Match: KAA0032381.1 (hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ96369.1 hypothetical protein E5676_scaffold1159G00320 [Cucumis melo var. makuwa]) HSP 1 Score: 151.4 bits (381), Expect = 4.6e-33 Identity = 73/111 (65.77%), Postives = 93/111 (83.78%), Query Frame = 0
BLAST of Carg19740 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia]) HSP 1 Score: 150.2 bits (378), Expect = 1.0e-32 Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of Carg19740 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 6.3e-30 Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0
BLAST of Carg19740 vs. NCBI nr
Match: KGN61447.1 (hypothetical protein Csa_006051 [Cucumis sativus]) HSP 1 Score: 140.6 bits (353), Expect = 8.2e-30 Identity = 71/111 (63.96%), Postives = 90/111 (81.08%), Query Frame = 0
BLAST of Carg19740 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 73/111 (65.77%), Postives = 93/111 (83.78%), Query Frame = 0
BLAST of Carg19740 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 5.0e-33 Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of Carg19740 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30 Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0
BLAST of Carg19740 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 4.0e-30 Identity = 71/111 (63.96%), Postives = 90/111 (81.08%), Query Frame = 0
BLAST of Carg19740 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.6e-29 Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0
BLAST of Carg19740 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 68.2 bits (165), Expect = 4.8e-12 Identity = 25/46 (54.35%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Carg19740 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 61.6 bits (148), Expect = 4.5e-10 Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of Carg19740 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
BLAST of Carg19740 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.8 bits (133), Expect = 2.5e-08 Identity = 22/44 (50.00%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of Carg19740 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07 Identity = 20/52 (38.46%), Postives = 38/52 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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