Carg19578 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg19578
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RRP6-like 2
LocationCarg_Chr03: 3284181 .. 3291107 (-)
RNA-Seq ExpressionCarg19578
SyntenyCarg19578
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTCGATCAGTCTGATTCACAGAAGGCTCAGACTCTGCAATCCCTAACCAGTGGTTCTCTCGGTTCGTCTTTGTCGAAGCTCGCCGGCTCTTCCCAGGGTATTCCGGCTGGCAAAGACTTTCACTTTTATTACAACTTTGATGAATTCAAAATCCCGATACGGAGCATCGACCGGCAATCTCAGTCGATGCTCGAGACCATTGGCTCGTCCGCTGAAGTTTGGGGCAAGGAAATGGCGTTCCCCGAGGATAACGACGACGCGTATGATTGGTTGGTTAATGTTAACGATGAGATTTTGGAGCGGTTCGATGTGTCGCTGGACGAGTTTCAGAGGATTCGAAAGGAGGAGGAGGAGGAGGAGAGTGGGAGGGCAGTGGCTTTGACGGCGGACGCTGATGATGGGTTTCAGTTGGTGTGTGGGAAGAAGAAGAAGAGTCCGAGTCATGGAGACGAGGTGCACGATTCTTTTGAGTCTAGTGTGAAGGTTGCTACCAAAGACAGGAGAACTTTGGGGGTGAAGCCGAAAGTGCCATTTCATATACCGACTATCCGTAGACCGCAGGACGAGTTTAACATTTTGGTTAATAATGCAAATCAGCCATTTGAGCATGTCTGGCTGCAAAGGAGTGAAGATGGCTCGCGGTTTGTACATCCACTGGTTAGTTTAATCCCCTTTGGCTTGCTGTGGCCTTAAAGTGTTACTTTTTCCATTTATTTTGATTACAAGAGAGGAAGAAGATTACGCTTCGCTCATGTTAACTGACCTTGGTGCTTTGCATTACTTTAGAAAGTTAAGACTACATTTTAGTGGCTCCTTTAAGACGAGACCAAATTTTAATGGCCAGAAGATTTTGGCTTATCCTTTGTAAATATGGTCTGTGGTTTAGTGGGGATGCGTTGGGATTCAAACTGATTGTCATGTGTATTGTGTGTATCCATTTTTCATGATCAGGAATCATTTTGTGGGAAGTTGAGAGTTGTTGCTTACTTCAATTTACTTGTATGTGCAGGAGAAGCTATCTGTATTGGACTTTGTCGATAAGATTAATGAAGATTTTCAACCTGTTTATCCACCATCTTTGGATTGCACCCCTTTCAAATTCATTGAGGAAGTTAATGATTTGAAAGAATTGGCAGCTAAATTGCGACGGGAGAACGAATTTGCGGTACAAAACTATTACTAATTTAATTCTATGAGAAACATATATGATCAGAAGTAATTATTCTGTATTGCCTGTATTTAGACTGTGTTTTAAACGAGTTTGGCGGTCCAAATGCTTACTTCTCAAGCTCTCATTTTGCCTTATTAATTTGAGTTGGGGAAGAAACCAATAAAATGCATATGAATTCAAGATCTGTTGCTCTATTATCAAATAAATCAGAGATTGGCGTTAATTTGCAATGGAACATAGTACTCTTTGTAGAATTTCTCATGGTATGATTTTCTTTGCAACTTTGATTTCTGTGTTCTGTCTATTGATGCACGTTATTAACCTTTTAGGTTGATTTGGAGCATAATCAGTATCGATCTTTTCAAGGACTTACCTGTCTGATGCAAATTTCTACAAGAACTGAGGATTTTGTAGTTGATACATTGAAGCTTAGAATTCATGTGGGGCCCTATTTGAGAGAGGTTTTCAAGGATCCTTCAAAGAGAAAGGTAAACGTTGTGAGAAGAAATGTTTTTTTGTTGTCATTTTAGTTTTCGTGGGGGTTTTATTGTAATATTTATACTCATTTAGGTGCTGCATGGAGCAGACCGAGACGTTGTGTGGCTTCAACGGGATTTTGGGATTTATATTTGCAACTTATTTGACACTGGGCAGGTGGTGTTTTTAAAGCCATTATCAAGTATTTGTTATGTTTCTTTTGTCCTCTTATGGTTATCACTCTTATCAAATTCTCTTACGTCTACATTTGGATTATGGTCTGCAAGTTACAATCTCACTCCTAGGTTCTTGCATGAGCTTATTCCCTCAGATGCATATAGTTCGTTATACCCAAGCTAATTGTAAATAGTATGGGACCTTTATCCCTTTTTTCCCCATTTAATTGAGGTCCCTACTTGCATTTTAGTGGACTTGGGAGGTTTTGCCCTCATATCCTTTTGTCTTTTTGATTTGTTTATCTACCTGAAAAAAATGGTTGTCAGTTTACAGTATCTACCTATTCTTCCTTTCTCTGCACTTGTGCTTTAGTTCTTACATTAGTATCTTAATATCATTGAATTACCACGCAAGTTTCTATTTTTGTTCTTTTATCATCCCCTTCTTCTTTGTCTTCACAAATTAGGCAACTTCTGGCTATAGTTTTTTTCAGAGGTATCCAGATAATTTAATACAGTTTTTTCCATTGATTATAGGAACTAGAGCGTCTCTGAATTTCTGATTATAAAAAAAATTCATCAAACTTAGCAATCATTTTTTGAAACTATATTCTTTGCTTGGGTGTATCCTTATGTCAATGTTCCAAGTTTAATGGTTTTTACAGGTTTTGCCTGCTTTTCCAGCCATCAAATAAAGCTCTACTTGTTATGCTTGGCTTAGTGGCCTTGGATTTTGTTTCCTGGATAAGTTGTTGATTTATGATTATCTTTTCAAGGATTGTCTAGCTTTAGACTTCTTTTGGGGATGCAGGGTCTTCTTTCTCTGTATCTTAACTTGCAGAGAACGAATAACTTTCGACATGTACATTCACATTTTTTTTCCTCAGGCTTCAAGAGTTTTGAAACTGGAAAGAAATAGTCTGGAGTATCTCCTTCATCACTTTTGTGGTGTTGCAGCTAATAAAGAGTAGGGACTCTCTCTCAGCATCTGGATGCTGTGTGCGTGGATGGGTCTTTTTTGTTGCTTTAACAGTTAAAACTTGTTACAGGTACCAGAATGCAGACTGGAGATTAAGACCTCTTCCTGAGGAGATGCTGAGGTATAAATGTCTTTTGTTCTTGCCATGTAGTTTTTTCCCCCTAGTAGTACACCTTTGTTTATATTTTTTTCTCTTTGAAGATGAATAGTATTCTATTGTTTTATTTTTCCCTCTAGTAGTCTTTGCGTGGATGCACTTGACAATTTTTATTGTGAACTTTGAAGAATGAGACAAAATAAATGTTATAAAATCTTAAAGCCCGTAATCTACAGTTAAAACAATCTCCGTTAGGAGAAAATAGGGTGCTAGTCTGCGATGATGCTCGAGTTAAAAGATCAATGAAATTTTCTCATATGGAGTCTTCTGTAAGGGTAGTTGGTGTAATTAGTATTCTTTTTGGATGCATCGAGCAAATTACCGAAGTGAGAGTGTAAATGCTTTAAAGCGTGTGGTATTGCTTGAAGTTTTCTTTGATTGTACATTATTTTGTTGTATCCTTATTCACTTTCATTTAACTCGATATCTTTTAATCACAGATATGCAAGGGAAGATACACATTATTTGCTATATATTTATGATTTGATGAGGAAGAAGCTGTCCTCAATGCCCCGTGAATCTGAAGAATCTGATCTTCCTTTGGTAGAGGTATAGTTGCTCTACATCTTATGCTATTTTGTTAAAAAATCCAGAAAAAATTGGATTTTAGGGAAATGTGGTTGAGCTTTGTTCAGCTACCTATATCCTCAGCGTTCTGCTAATATTGATCCACCTTCATGGTTGCCTTACAAATTGTAGGATCTCTTTAAAGCTACTGGCAACTGAGATCGTAAACAATGTTTGTGTTTTTAACGAGTTCATCAAGATCGGAAGTGAATTTTAGCCACTTAAATTGATAGCATAAACATATGTTGAGTTTTTTTTTTTCCTTTTCCAATGTGATATGGTTTTCAAAAAAATCTTGGAATCTGAATGAATTTCATTAAGCTAAGAGATATTATGTAGAGCTGATGGAAAAGCGTATATACTCCTGGATTATGATTATATTTATTCTTTTATTCTGTCAATGTTCAAAAGTATATGTTGCTACAAGTATGGAAGTAACAATTACAGGTTGCACAATCTCCATAGCCAGCATTTTTAAAATTCTAGTTTAGGACTTATTCTGCCAGATAAGGTTTGACCTATAACATTATGAAATCTGTTTTGTTTTTTCACTCACGCTTTGACATATGGGGATCTATATCTTTTTTTGTATTGATATTGGTTTGCTGCCTGTAATATTTCAAACTCAATCAAGTTGCACTTCATATTGTCCTAAGAGAAAAGGTTGCACTCCATGTTTTCTCATACGGATCAGTGTGGTTCAATATAGGAAATCACCTTTAATTTTCACTTGACGGATACCATTACTCCAGCTTGAAAGTAACGCGTTCTTCTTAGAAATGAAATTAATTGGTTAGAGGCTAGATCATATGTCCTGTTTAATTTATGTTGCTGGAAGTAAATATCCTTTATTTACAACGTGACAGAGTCTCTTTGAGTGGCGAGATATTGTTGCTCGTGCAGAGGATGAAAGTACTGGTTACATACTGCCAAACAAAACGCTTCTGGAAATCGGTAACTGGGAAACTTACGCTGGCATTTGTTAGAAATAATCTTATTTTTGTGGCTTACTGCAGAATTTTAACATAGTTTTCTTATTGTTAAAGCCAAGCAGATGCCTGTCACCATTAACAAATTACGTAGATTACTGAAATCAAAGCATTCATTCATTGAGCGCAATCTTGCTTCAATTGTTACCATCATTAGGCATTCGATGCTGAATTCAAGTGCATTTGAAGAGGCTGCTGAGCGTTTGAAGGAAGTCCGTACCGAGGCGGTAAGGCTTGTGCTTGTAACCTCATGCTGTTTTTGTTACTAACTTAATAGACTCGAGAACATTTCCCTAGGTTTTTAAGGGCCTGAACTTCAATTAATTCATGGTGTTTAGCTATATGATTAGTGCTAGAATTATTTAGTTGTTTAAATGAGATGAAGGGAACACATCTATTCCTGGAGGCACCGGCTTTATTCTACGTCTAGAGTAGATATGGAGGAATGTTGTTCTGGCTTCTGAGATTTATTCTTAATTAAAAGAGCTCAACTAATTCATTTTGGTAGCATGAGGGTATTGGCAGACTAATAGTTTGAAGTTGTCTAACGGTTTGCAAGTCTTAATGTATCTGTTAATTGTTGTTGTTCATCGCCTTTTCATAAAATAGAACGGAGGGCTTCTTGTTTATGCTGACTAGGATTTTATGTACTATGTGTATCTGTATATTATTTTCTAGTACATGTAGCCCGTTTTCATGAAGCAACCCCGTTTCGTATAAACGACCCATTAGTAGAATGAACGGATACATTTTTGAGCCATTGGAAACCACGATAATATCAGACAAATTTCTCTCTGTTTCCTTTGAAGATTGCAGATGATTACCTTTTCATTTGCATATTTGATTTCATTACTTGTTGATTGGATATATATATATGATTCTTTCGTTTTTCTTGGCTGCTGATATTGATATTTTTAACATTCTCTTGCCTTCGCTGTTGATATGTTGTTTACATGACAGGCATCAGAAGAAAACACATCAGCTAATGAACATCAAGAAACTAATATGCCCGATACTTCGAATTTGAGATACGCAATCCCAATTGTGAAAGACAGTGCTGTTGATAATACTGCCAGTGATCAGATCTGTTCGTCCTCTTCTCAGTCTAAAGTTGCTCCCTTGGAACATGGATACCGGCCCTTTGTACCTGGAAAATGTGTAATGGTAGACCACTCAATGCATCCTGTTCTGAATGGGATGGGCCCAACGACATCGGAGCTGGGCGAACATTCCAATGGCGATAAATACCCGGTAGCGCAGGTATTGAAGTATATCTAATTAACCATGGTTAGAGACTAATTAGAACTTGCTTTTGTGTCTGATTGGTTTCTTTGCTTGAGATCTATGTTCTAAATGATTCCCTGTTTAAGGTTTCTGGAGTGAACATTACGTTGCAAAAGAAAACTAACCGAGGCGGTCTTGGTTCGCTATTGGGAAACTCGGCCCCAAAGAGAAAATTAGATACTGATACAAAGGTAGGGTCCTTTGGTGTTACATGTAAGATACCATTTCTTTTAGTTCTTCTCCTGTTGCTGCCTCATTGGTTTCGCTTATTTTTACTAGGACAAGGAAGAGAACAAGTTGGATAAAATCCGATCTTCTGTGACTCTACCCTTTCATTCATTCTTGGGAACGAGTGAACCATTAAAGTCCGTTGTAGAACCAACCACCATGACTGCATTAAAAGCTCAAAATTCCGAAGCACCTGCTGCCGAGTCGACAAAAAGCTCGAATATAGAGCTACCTGTAATGCCAGTCTCAAAATCCTGCCCAACAGATGAGATTATCATGTTGGAAGATGATTCAGATGACGAAGACGAAGAATTGCATCCTGTTGCAGAAGCAGCCACCGATGAGCCAAAGTTGAAAGGTTTTAGTGCTAGTTCACCTCTTGAAATAGACGACGACGACGACAACAACGACGACGAACCAATGTCTCTGTCCGAATTGTCTTCTAGCTTTCAAAAATGTTTGAATTCTAATGAACAAGCTATGAACCTTCAAGAAACTGACGATTCAGGAAAACAAAGTGGTTTTTTGCAGATCAAACCGTTCGACTACGAAGCAGCAAGGAAACAAATAGAATTTGGAGAAGATTTGGAGGAAGACTCGAAACGTGATCCGAAGGCATCGAAGAACACTGGGGCAAAGTCAGATTTAGATCTGAATCGAGTTCACAAGAACAGTGAAAGCGTGGAATTACCGCAAGGCAAACGACGCCATGCCTTCCCTGCTACCGGAAACCGAAGTGCAACTTTCCGCTAAATCAATGTAAGTGATTTTTACTCTGTAAACTACAGACGGTATTACAAGTCAAAAGATTTCAAAGTATTAAAATGGAAAGAGTAAAAAGTCTATTAAATAGCGTTGAAAGAGTGATCTTGCCTGTTTTCAGTTTGCCAAGG

mRNA sequence

ATGGACGTCGATCAGTCTGATTCACAGAAGGCTCAGACTCTGCAATCCCTAACCAGTGGTTCTCTCGGTTCGTCTTTGTCGAAGCTCGCCGGCTCTTCCCAGGGTATTCCGGCTGGCAAAGACTTTCACTTTTATTACAACTTTGATGAATTCAAAATCCCGATACGGAGCATCGACCGGCAATCTCAGTCGATGCTCGAGACCATTGGCTCGTCCGCTGAAGTTTGGGGCAAGGAAATGGCGTTCCCCGAGGATAACGACGACGCGTATGATTGGTTGGTTAATGTTAACGATGAGATTTTGGAGCGGTTCGATGTGTCGCTGGACGAGTTTCAGAGGATTCGAAAGGAGGAGGAGGAGGAGGAGAGTGGGAGGGCAGTGGCTTTGACGGCGGACGCTGATGATGGGTTTCAGTTGGTGTGTGGGAAGAAGAAGAAGAGTCCGAGTCATGGAGACGAGGTGCACGATTCTTTTGAGTCTAGTGTGAAGGTTGCTACCAAAGACAGGAGAACTTTGGGGGTGAAGCCGAAAGTGCCATTTCATATACCGACTATCCGTAGACCGCAGGACGAGTTTAACATTTTGGTTAATAATGCAAATCAGCCATTTGAGCATGTCTGGCTGCAAAGGAGTGAAGATGGCTCGCGGTTTGTACATCCACTGGAGAAGCTATCTGTATTGGACTTTGTCGATAAGATTAATGAAGATTTTCAACCTGTTTATCCACCATCTTTGGATTGCACCCCTTTCAAATTCATTGAGGAAGTTAATGATTTGAAAGAATTGGCAGCTAAATTGCGACGGGAGAACGAATTTGCGGTTGATTTGGAGCATAATCAGTATCGATCTTTTCAAGGACTTACCTGTCTGATGCAAATTTCTACAAGAACTGAGGATTTTGTAGTTGATACATTGAAGCTTAGAATTCATGTGGGGCCCTATTTGAGAGAGGTTTTCAAGGATCCTTCAAAGAGAAAGGTGCTGCATGGAGCAGACCGAGACGTTGTGTGGCTTCAACGGGATTTTGGGATTTATATTTGCAACTTATTTGACACTGGGCAGGTGGCTTCAAGAGTTTTGAAACTGGAAAGAAATAGTCTGGAGTATCTCCTTCATCACTTTTGTGGTGTTGCAGCTAATAAAGAGTACCAGAATGCAGACTGGAGATTAAGACCTCTTCCTGAGGAGATGCTGAGATATGCAAGGGAAGATACACATTATTTGCTATATATTTATGATTTGATGAGGAAGAAGCTGTCCTCAATGCCCCGTGAATCTGAAGAATCTGATCTTCCTTTGGTAGAGAGTCTCTTTGAGTGGCGAGATATTGTTGCTCGTGCAGAGGATGAAAGTACTGGTTACATACTGCCAAACAAAACGCTTCTGGAAATCGCCAAGCAGATGCCTGTCACCATTAACAAATTACGTAGATTACTGAAATCAAAGCATTCATTCATTGAGCGCAATCTTGCTTCAATTGTTACCATCATTAGGCATTCGATGCTGAATTCAAGTGCATTTGAAGAGGCTGCTGAGCGTTTGAAGGAAGTCCGTACCGAGGCGGCATCAGAAGAAAACACATCAGCTAATGAACATCAAGAAACTAATATGCCCGATACTTCGAATTTGAGATACGCAATCCCAATTGTGAAAGACAGTGCTGTTGATAATACTGCCAGTGATCAGATCTGTTCGTCCTCTTCTCAGTCTAAAGTTGCTCCCTTGGAACATGGATACCGGCCCTTTGTACCTGGAAAATGTGTAATGGTAGACCACTCAATGCATCCTGTTCTGAATGGGATGGGCCCAACGACATCGGAGCTGGGCGAACATTCCAATGGCGATAAATACCCGGTAGCGCAGGTTTCTGGAGTGAACATTACGTTGCAAAAGAAAACTAACCGAGGCGGTCTTGGTTCGCTATTGGGAAACTCGGCCCCAAAGAGAAAATTAGATACTGATACAAAGGACAAGGAAGAGAACAAGTTGGATAAAATCCGATCTTCTGTGACTCTACCCTTTCATTCATTCTTGGGAACGAGTGAACCATTAAAGTCCGTTGTAGAACCAACCACCATGACTGCATTAAAAGCTCAAAATTCCGAAGCACCTGCTGCCGAGTCGACAAAAAGCTCGAATATAGAGCTACCTGTAATGCCAGTCTCAAAATCCTGCCCAACAGATGAGATTATCATGTTGGAAGATGATTCAGATGACGAAGACGAAGAATTGCATCCTGTTGCAGAAGCAGCCACCGATGAGCCAAAGTTGAAAGGTTTTAGTGCTAGTTCACCTCTTGAAATAGACGACGACGACGACAACAACGACGACGAACCAATGTCTCTGTCCGAATTGTCTTCTAGCTTTCAAAAATGTTTGAATTCTAATGAACAAGCTATGAACCTTCAAGAAACTGACGATTCAGGAAAACAAAGTGGTTTTTTGCAGATCAAACCGTTCGACTACGAAGCAGCAAGGAAACAAATAGAATTTGGAGAAGATTTGGAGGAAGACTCGAAACGTGATCCGAAGGCATCGAAGAACACTGGGGCAAAGTCAGATTTAGATCTGAATCGAGTTCACAAGAACAGTGAAAGCGTGGAATTACCGCAAGGCAAACGACGCCATGCCTTCCCTGCTACCGGAAACCGAAGTGCAACTTTCCGCTAAATCAATGTAAGTGATTTTTACTCTGTAAACTACAGACGGTATTACAAGTCAAAAGATTTCAAAGTATTAAAATGGAAAGAGTAAAAAGTCTATTAAATAGCGTTGAAAGAGTGATCTTGCCTGTTTTCAGTTTGCCAAGG

Coding sequence (CDS)

ATGGACGTCGATCAGTCTGATTCACAGAAGGCTCAGACTCTGCAATCCCTAACCAGTGGTTCTCTCGGTTCGTCTTTGTCGAAGCTCGCCGGCTCTTCCCAGGGTATTCCGGCTGGCAAAGACTTTCACTTTTATTACAACTTTGATGAATTCAAAATCCCGATACGGAGCATCGACCGGCAATCTCAGTCGATGCTCGAGACCATTGGCTCGTCCGCTGAAGTTTGGGGCAAGGAAATGGCGTTCCCCGAGGATAACGACGACGCGTATGATTGGTTGGTTAATGTTAACGATGAGATTTTGGAGCGGTTCGATGTGTCGCTGGACGAGTTTCAGAGGATTCGAAAGGAGGAGGAGGAGGAGGAGAGTGGGAGGGCAGTGGCTTTGACGGCGGACGCTGATGATGGGTTTCAGTTGGTGTGTGGGAAGAAGAAGAAGAGTCCGAGTCATGGAGACGAGGTGCACGATTCTTTTGAGTCTAGTGTGAAGGTTGCTACCAAAGACAGGAGAACTTTGGGGGTGAAGCCGAAAGTGCCATTTCATATACCGACTATCCGTAGACCGCAGGACGAGTTTAACATTTTGGTTAATAATGCAAATCAGCCATTTGAGCATGTCTGGCTGCAAAGGAGTGAAGATGGCTCGCGGTTTGTACATCCACTGGAGAAGCTATCTGTATTGGACTTTGTCGATAAGATTAATGAAGATTTTCAACCTGTTTATCCACCATCTTTGGATTGCACCCCTTTCAAATTCATTGAGGAAGTTAATGATTTGAAAGAATTGGCAGCTAAATTGCGACGGGAGAACGAATTTGCGGTTGATTTGGAGCATAATCAGTATCGATCTTTTCAAGGACTTACCTGTCTGATGCAAATTTCTACAAGAACTGAGGATTTTGTAGTTGATACATTGAAGCTTAGAATTCATGTGGGGCCCTATTTGAGAGAGGTTTTCAAGGATCCTTCAAAGAGAAAGGTGCTGCATGGAGCAGACCGAGACGTTGTGTGGCTTCAACGGGATTTTGGGATTTATATTTGCAACTTATTTGACACTGGGCAGGTGGCTTCAAGAGTTTTGAAACTGGAAAGAAATAGTCTGGAGTATCTCCTTCATCACTTTTGTGGTGTTGCAGCTAATAAAGAGTACCAGAATGCAGACTGGAGATTAAGACCTCTTCCTGAGGAGATGCTGAGATATGCAAGGGAAGATACACATTATTTGCTATATATTTATGATTTGATGAGGAAGAAGCTGTCCTCAATGCCCCGTGAATCTGAAGAATCTGATCTTCCTTTGGTAGAGAGTCTCTTTGAGTGGCGAGATATTGTTGCTCGTGCAGAGGATGAAAGTACTGGTTACATACTGCCAAACAAAACGCTTCTGGAAATCGCCAAGCAGATGCCTGTCACCATTAACAAATTACGTAGATTACTGAAATCAAAGCATTCATTCATTGAGCGCAATCTTGCTTCAATTGTTACCATCATTAGGCATTCGATGCTGAATTCAAGTGCATTTGAAGAGGCTGCTGAGCGTTTGAAGGAAGTCCGTACCGAGGCGGCATCAGAAGAAAACACATCAGCTAATGAACATCAAGAAACTAATATGCCCGATACTTCGAATTTGAGATACGCAATCCCAATTGTGAAAGACAGTGCTGTTGATAATACTGCCAGTGATCAGATCTGTTCGTCCTCTTCTCAGTCTAAAGTTGCTCCCTTGGAACATGGATACCGGCCCTTTGTACCTGGAAAATGTGTAATGGTAGACCACTCAATGCATCCTGTTCTGAATGGGATGGGCCCAACGACATCGGAGCTGGGCGAACATTCCAATGGCGATAAATACCCGGTAGCGCAGGTTTCTGGAGTGAACATTACGTTGCAAAAGAAAACTAACCGAGGCGGTCTTGGTTCGCTATTGGGAAACTCGGCCCCAAAGAGAAAATTAGATACTGATACAAAGGACAAGGAAGAGAACAAGTTGGATAAAATCCGATCTTCTGTGACTCTACCCTTTCATTCATTCTTGGGAACGAGTGAACCATTAAAGTCCGTTGTAGAACCAACCACCATGACTGCATTAAAAGCTCAAAATTCCGAAGCACCTGCTGCCGAGTCGACAAAAAGCTCGAATATAGAGCTACCTGTAATGCCAGTCTCAAAATCCTGCCCAACAGATGAGATTATCATGTTGGAAGATGATTCAGATGACGAAGACGAAGAATTGCATCCTGTTGCAGAAGCAGCCACCGATGAGCCAAAGTTGAAAGGTTTTAGTGCTAGTTCACCTCTTGAAATAGACGACGACGACGACAACAACGACGACGAACCAATGTCTCTGTCCGAATTGTCTTCTAGCTTTCAAAAATGTTTGAATTCTAATGAACAAGCTATGAACCTTCAAGAAACTGACGATTCAGGAAAACAAAGTGGTTTTTTGCAGATCAAACCGTTCGACTACGAAGCAGCAAGGAAACAAATAGAATTTGGAGAAGATTTGGAGGAAGACTCGAAACGTGATCCGAAGGCATCGAAGAACACTGGGGCAAAGTCAGATTTAGATCTGAATCGAGTTCACAAGAACAGTGAAAGCGTGGAATTACCGCAAGGCAAACGACGCCATGCCTTCCCTGCTACCGGAAACCGAAGTGCAACTTTCCGCTAA

Protein sequence

MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDRQSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLSSMPRESEESDLPLVESLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKRDPKASKNTGAKSDLDLNRVHKNSESVELPQGKRRHAFPATGNRSATFR
Homology
BLAST of Carg19578 vs. NCBI nr
Match: KAG7033657.1 (Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1741.1 bits (4508), Expect = 0.0e+00
Identity = 889/889 (100.00%), Postives = 889/889 (100.00%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
           EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
           HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
           VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420

Query: 421 SMPRESEESDLPLVESLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLK 480
           SMPRESEESDLPLVESLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLK
Sbjct: 421 SMPRESEESDLPLVESLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLK 480

Query: 481 SKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDT 540
           SKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDT
Sbjct: 481 SKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDT 540

Query: 541 SNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG 600
           SNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG
Sbjct: 541 SNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG 600

Query: 601 MGPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEE 660
           MGPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEE
Sbjct: 601 MGPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEE 660

Query: 661 NKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMP 720
           NKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMP
Sbjct: 661 NKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMP 720

Query: 721 VSKSCPTDEIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPM 780
           VSKSCPTDEIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPM
Sbjct: 721 VSKSCPTDEIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPM 780

Query: 781 SLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK 840
           SLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK
Sbjct: 781 SLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK 840

Query: 841 RDPKASKNTGAKSDLDLNRVHKNSESVELPQGKRRHAFPATGNRSATFR 890
           RDPKASKNTGAKSDLDLNRVHKNSESVELPQGKRRHAFPATGNRSATFR
Sbjct: 841 RDPKASKNTGAKSDLDLNRVHKNSESVELPQGKRRHAFPATGNRSATFR 889

BLAST of Carg19578 vs. NCBI nr
Match: KAG6603474.1 (Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1713.7 bits (4437), Expect = 0.0e+00
Identity = 887/916 (96.83%), Postives = 887/916 (96.83%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
           EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
           HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
           VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420

Query: 421 SMPRESEESDLPLVE---------------------------SLFEWRDIVARAEDESTG 480
           SMPRESEESDLPLVE                           SLFEWRDIVARAEDESTG
Sbjct: 421 SMPRESEESDLPLVEVYKRIHTFYVYGLQGSGFNAQQLAVAASLFEWRDIVARAEDESTG 480

Query: 481 YILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHSMLNSSAFEEAAER 540
           YILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHSMLNSSAFEEAAER
Sbjct: 481 YILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHSMLNSSAFEEAAER 540

Query: 541 LKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVA 600
           LKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVA
Sbjct: 541 LKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVA 600

Query: 601 PLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPVAQVSGVNITLQKKT 660
           PLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPVAQVSGVNITLQKKT
Sbjct: 601 PLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPVAQVSGVNITLQKKT 660

Query: 661 NRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTM 720
           NRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTM
Sbjct: 661 NRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTM 720

Query: 721 TALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDSDDEDEELHPVAEAATD 780
           TALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDSDDEDEELHPVAEAATD
Sbjct: 721 TALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDSDDEDEELHPVAEAATD 780

Query: 781 EPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSG 840
           EPKLKGFSASSPLEI DDDDNNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSG
Sbjct: 781 EPKLKGFSASSPLEI-DDDDNNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSG 840

Query: 841 FLQIKPFDYEAARKQIEFGEDLEEDSKRDPKASKNTGAKSDLDLNRVHKNSESVELPQGK 890
           FLQIKPFDYEAARKQIEFGEDLEEDSKRDPKASKNTGAKSDLDLNRVHKNSESVELPQGK
Sbjct: 841 FLQIKPFDYEAARKQIEFGEDLEEDSKRDPKASKNTGAKSDLDLNRVHKNSESVELPQGK 900

BLAST of Carg19578 vs. NCBI nr
Match: XP_022950321.1 (protein RRP6-like 2 [Cucurbita moschata])

HSP 1 Score: 1699.1 bits (4399), Expect = 0.0e+00
Identity = 885/936 (94.55%), Postives = 886/936 (94.66%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
           EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
           HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
           VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420

Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
           SMPRESEESDLPLVE                                           SL
Sbjct: 421 SMPRESEESDLPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLAVAASL 480

Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
           FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540

Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
           RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600

Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
           TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660

Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
           PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
           LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKPCPTDEIIMLEDDS 780

Query: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840
           DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE
Sbjct: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840

Query: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR----DPKASKNTGAKS 890
           QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR    DPKASKNTGAKS
Sbjct: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKREDDKDPKASKNTGAKS 900

BLAST of Carg19578 vs. NCBI nr
Match: XP_023544636.1 (protein RRP6-like 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1667.5 bits (4317), Expect = 0.0e+00
Identity = 871/940 (92.66%), Postives = 880/940 (93.62%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVND+ILERFDVSLDEFQRIRK  EE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDDILERFDVSLDEFQRIRK--EE 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
           EESGRAVA TADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVAFTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
           HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDG+RFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGTRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
           VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420

Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
           SMPRESEESDLPLVE                                           SL
Sbjct: 421 SMPRESEESDLPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLAVAASL 480

Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
           FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540

Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
           RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600

Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
           TA+DQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY
Sbjct: 601 TANDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660

Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
           PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTD KDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDIKDKEENKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
           LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELP MPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPAMPVSKPCPTDEIIMLEDDS 780

Query: 781 D----DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCL 840
           D    DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN DEP+SLSELSSSFQKCL
Sbjct: 781 DDDDEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN-DEPISLSELSSSFQKCL 840

Query: 841 NSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK----RDPKASKNT 890
           NSNEQAMNLQETDDSGKQSGFLQI+PFDY+AARKQIEFGEDLEEDSK    +DPKASKN 
Sbjct: 841 NSNEQAMNLQETDDSGKQSGFLQIQPFDYKAARKQIEFGEDLEEDSKLEDNKDPKASKNA 900

BLAST of Carg19578 vs. NCBI nr
Match: XP_022978083.1 (protein RRP6-like 2 [Cucurbita maxima])

HSP 1 Score: 1648.3 bits (4267), Expect = 0.0e+00
Identity = 862/940 (91.70%), Postives = 872/940 (92.77%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
           EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDR+TLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRKTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
           HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
           YPPSLDCTPFKFIEEVNDLK+LAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKKLAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
           VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRD+VWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDIVWLQRDFGIYICNLFDTGQ-ASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420

Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
           SMP ESEESD+PLVE                                           SL
Sbjct: 421 SMPHESEESDIPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLSVAASL 480

Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
           FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540

Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
           RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600

Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
           TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHS HPVLNGMGPTT ELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSTHPVLNGMGPTTLELGEHSNGDKY 660

Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
           PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTD KDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
           LGTSE LKSVVEPTTMT LK QNSEAP AESTK+SNIELP MPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEQLKSVVEPTTMTTLKTQNSEAPVAESTKTSNIELPAMPVSKPCPTDEIIMLEDDS 780

Query: 781 D----DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCL 840
           D    DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD  N+DEPMSLSELSSSFQKCL
Sbjct: 781 DDDDEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD--NNDEPMSLSELSSSFQKCL 840

Query: 841 NSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK----RDPKASKNT 890
           NSNEQAMNL+ETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK    +DPKASK  
Sbjct: 841 NSNEQAMNLRETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKLEDDKDPKASKIA 900

BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match: A9LLI7 (Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1)

HSP 1 Score: 764.2 bits (1972), Expect = 1.6e-219
Identity = 465/945 (49.21%), Postives = 584/945 (61.80%), Query Frame = 0

Query: 1   MDVDQSD-SQKAQTLQSLTSG-SLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSI 60
           MDVD+S  S K ++L+ L  G S  S+LS+L+ SS+ IP  +DFHFYYNFDEFK PI  I
Sbjct: 6   MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65

Query: 61  DRQSQSMLETIGSSAEVWGKEMAFPEDNDDAY--DWLVNVNDEILERFDVSLDEFQRIRK 120
              SQS L TIG S +VWGK M FP D DD Y  DWL NVNDE++ERFDVS+DEFQRIRK
Sbjct: 66  TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125

Query: 121 EEEEEESGRAVALTADADDGFQLVCGKKKKSPSH---GDEVHDSFES--SVKVATKDRRT 180
             +E+E GR+V +  D DDGFQ+V GKKKK   +   G    +   S   VK+A +D+ +
Sbjct: 126 --KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNS 185

Query: 181 LGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVD 240
            G K KVPFH+PTI++PQ+E+NILVNNAN PFEHVWL+RSED  R +HPLEK SVLDFVD
Sbjct: 186 SG-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVD 245

Query: 241 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 300
           K   + +PV P  L+ TPFKF++EV DLKEL AKLR   EFAVDLEHNQYRSFQGLTCLM
Sbjct: 246 KDVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLM 305

Query: 301 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 360
           QISTRTED++VDT KLRIH+GPYLRE+FKDP K+KV+HGADRD++WLQRDFGIY+CNLFD
Sbjct: 306 QISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFD 365

Query: 361 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 420
           TGQ ASRVL LERNSLE+LL HFCGV ANKEYQNADWR+RPLPEEM RYAREDTHYLLYI
Sbjct: 366 TGQ-ASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYI 425

Query: 421 YDLMRKKLSSMPRESEESDLPLVE------------------------------------ 480
           YDL++ +L  M ++   +D PL+E                                    
Sbjct: 426 YDLIKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNA 485

Query: 481 -------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIER 540
                   L EWRD +ARAEDESTGY+LPNK LLEIAK+MP ++ KLRR+LKSKH +IER
Sbjct: 486 AQLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIER 545

Query: 541 NLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIP 600
           N+ S+V++IR SM + +AFE AA  LK+V      ++N                    I 
Sbjct: 546 NVDSVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIE-----------------PIS 605

Query: 601 IVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSEL 660
             KD    + AS  +  +SSQ +                     S   ++  MG   +  
Sbjct: 606 EKKDLHTGDVASPSLKENSSQLE---------------------STRDLI--MGAANTNE 665

Query: 661 GEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRS 720
           G       +  A+VS   + + KK +  GLG+LLGN+A K+K  TD K KE+ KL++IRS
Sbjct: 666 GRGLGSGLFGSAKVSAA-VRISKKPS-SGLGALLGNAASKKKSRTDEKVKEDVKLEQIRS 725

Query: 721 SVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTD 780
           SV L FHSF       KS  E +     K +   +               MP S S   D
Sbjct: 726 SVNLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSS--------------TMPASVS-KED 785

Query: 781 EIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN---DDEPMSLSEL 840
            +  L+DDS++  E +         E K+        + +++ D+     +DEPMSLSEL
Sbjct: 786 GVKELKDDSEEASEIVG--TSGRVSESKVSSSEMGDIILLENGDEKKVDAEDEPMSLSEL 845

Query: 841 SSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLE-EDSKRDPK 890
           S++FQKC  S  ++   Q      KQ+ FL I+PFDYEAARK+++FGE  +    KR+  
Sbjct: 846 STNFQKCFKSMNKSKKAQ------KQTEFLNIEPFDYEAARKEVKFGEGHKGRQGKREAA 869

BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match: Q0WVE8 (Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.1e-139
Identity = 303/685 (44.23%), Postives = 398/685 (58.10%), Query Frame = 0

Query: 103 RFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSV 162
           RFD  +DEF+R RK EE+ +    V + A++D GF                         
Sbjct: 2   RFDDPMDEFKRNRKMEEDSKKVIDVKV-AESDKGFAKF---------------------- 61

Query: 163 KVATKDRRTLGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLE 222
                       K +VPFHIPT+ +PQ+E+ ILV+NAN PFEHV L++SEDG RF+HPLE
Sbjct: 62  -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121

Query: 223 KLSVLDFVDKINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYR 282
           +LSV+DFVD+   + +PV P  L+ TPFK +EEV DL++LAA L+   EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181

Query: 283 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDF 342
           +FQGLTCLMQISTRTED++VD  KL  H+GPYLRE+FKDP K+KV+HGADRD++WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241

Query: 343 GIYICNLFDTGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAR 402
           GIY+CNLFDTGQ ASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 GIYVCNLFDTGQ-ASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301

Query: 403 EDTHYLLYIYDLMRKKLSSMPRESEESDLPLVE--------------------------- 462
           EDTHYLLYIYD+MR +L +M +E E+SD PLVE                           
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361

Query: 463 ----------------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLL 522
                            L EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ + +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421

Query: 523 KSKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPD 582
           KSK  ++ERN  +++++IR SM N++AFE   + LK+ R E   E N      +      
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481

Query: 583 TSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLN 642
            S+L          +++    D     SS   V PL+   R     K V V+ ++ P + 
Sbjct: 482 ASSL----------SLEKVCVDDSKKQSSGFGVLPLK---RKLESDKTV-VEKNIEPKIE 541

Query: 643 GMGPTTSELGEHSNGDKYPVAQVSGVNITL-QKKTNRGGLGSLLGNSAPKRKLDTDTKDK 702
             G   S             + +S   + +   K    G G LL     KRK ++D K K
Sbjct: 542 KTGTEAS------------ASSLSSKKVCVDDSKKQSSGFGVLLS----KRKFESDNKVK 601

Query: 703 EENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPV 744
           EE K+ K +    +         +  +S  + T     KA ++    +E+    +  L  
Sbjct: 602 EEVKVSKSKPDKVIIVVDDDDDDDDDESYEQST-----KAADALDRVSETPSKGSPSLTQ 613

BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match: Q01780 (Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2)

HSP 1 Score: 266.2 bits (679), Expect = 1.4e-69
Identity = 191/518 (36.87%), Postives = 270/518 (52.12%), Query Frame = 0

Query: 16  SLTSGSLGSSLSKLAGSSQGIPA-GKDFHFYYNFDEFKIPIRSIDRQSQSMLETIGSSAE 75
           S    +LGS ++ +  +S G+P  G ++ FY +F  F+      + Q   +L+ +    +
Sbjct: 34  SFVKFALGSVVA-VTKASGGLPQFGDEYDFYRSFPGFQ---AFCETQGDRLLQCMSRVMQ 93

Query: 76  VWG-----KEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEEE-ESGRAVA 135
             G     K+ +   + +D +D LV+ ND ILER  + LDE   + K ++    +G  V 
Sbjct: 94  YHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVP 153

Query: 136 LTADADDGFQLV-CGKKKKSPS----HGDE-VHDSFESSVKVATKDRRTLG---VKPKVP 195
            T  +    +    GKK KS +    H    +    +   K+   +   L    +KP   
Sbjct: 154 KTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQ 213

Query: 196 FHIPTI------RRPQDEFNIL-VNNANQPFEHVWLQRSEDGSRFVHPLE-KLSVLDFVD 255
             +P         RPQD    L V  A   F H    +  +   F HP + +L+     D
Sbjct: 214 KPLPQALSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELNHFTPAD 273

Query: 256 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 315
            + +  QP     ++ TP  FI  +++L EL  KL    EFAVDLEH+ YRSF GLTCLM
Sbjct: 274 AVLQKPQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLM 333

Query: 316 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 375
           QISTRTEDF++DTL+LR  +   L E   DP+  KV HGAD D+ WLQ+DFG+Y+ N+FD
Sbjct: 334 QISTRTEDFIIDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFD 393

Query: 376 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 435
           T Q A+R+L L R+SL++LL  +C V +NK+YQ ADWR+RPLPEEML YAR+DTHYLLYI
Sbjct: 394 THQ-AARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYARDDTHYLLYI 453

Query: 436 YDLMRKKLSS-------------------------MPRESEESDLPL------------- 470
           YD MR ++                            P  ++ES L L             
Sbjct: 454 YDKMRLEMWERGNGQPVQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQL 513

BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match: P56960 (Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2)

HSP 1 Score: 260.0 bits (663), Expect = 9.8e-68
Identity = 192/518 (37.07%), Postives = 267/518 (51.54%), Query Frame = 0

Query: 16  SLTSGSLGSSLSKLAGSSQGIPA-GKDFHFYYNFDEFKIPIRSIDRQSQSMLETIGSSAE 75
           S    +LGS ++ +  +S G+P  G ++ FY +F  F+      + Q   +L+ +    +
Sbjct: 34  SFVKFALGSVVA-VTKASGGLPQFGDEYDFYRSFPAFQ---AFCETQGDRLLQCMSRVMQ 93

Query: 76  VWG-----KEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEEE-ESGRAVA 135
             G     K+ +   + +D +D LV+ ND ILER  + LDE   + K ++    +G  V 
Sbjct: 94  YHGCRSNIKDRSKVTELEDKFDLLVDTNDVILERVGMLLDEASGVNKHQQPVLPAGLQVP 153

Query: 136 LTADADDGFQL-VCGKKKKSPS----HGDE-VHDSFESSVKVATKDRRTLG---VKPKVP 195
            T  +    +    GKK KS +    H    V        K+   +   L    VKP   
Sbjct: 154 KTIVSSWNRKAGEYGKKAKSETFRLLHAKNIVRPQLRFREKIDNSNTPFLPKIFVKPNAR 213

Query: 196 FHIPTI------RRPQDEFNIL-VNNANQPFEHVWLQRSEDGSRFVHPLE-KLSVLDFVD 255
             +P         RPQD    L V  A   F H    +  +   F HP + +L       
Sbjct: 214 KPLPLALSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELDHFTPPQ 273

Query: 256 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 315
            + +  +P    ++  TP   +  +++L EL  KL    EFAVDLEH+ YRSF GLTCLM
Sbjct: 274 SVLQRPKPQLYRAVGETPCHLVSSLDELVELNEKLLGCQEFAVDLEHHSYRSFLGLTCLM 333

Query: 316 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 375
           QISTRTEDF+VDTL+LR  +   L E   DP+  KV HGAD D+ WLQ+DFG+Y+ N+FD
Sbjct: 334 QISTRTEDFIVDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFD 393

Query: 376 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 435
           T Q A+R+L L R+SL++LL  +CGV +NK+YQ ADWR+RPLPEEML YAR+DTHYLLYI
Sbjct: 394 THQ-AARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYI 453

Query: 436 YDLMRKKLSS-------------------------MPRESEESDLPL------------- 470
           YD MR +L                            P  ++ES L L             
Sbjct: 454 YDRMRLELWERGNHQPVQLQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQL 513

BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match: Q10146 (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp6 PE=3 SV=2)

HSP 1 Score: 227.6 bits (579), Expect = 5.4e-58
Identity = 174/569 (30.58%), Postives = 262/569 (46.05%), Query Frame = 0

Query: 41  DFHFYYNFD-EFKIPIRSIDRQSQSMLETIGSSAE-VWGKEMAFPEDNDDAYDWLVNVND 100
           D  FY + D EF   I+S+  +   ++E + S  +    +++   ED D+ +  + +  D
Sbjct: 24  DIPFYKSIDTEFNENIKSVSSRFMRLIELLLSKVDRSRAEDIVDVEDIDNRWAEVSDTLD 83

Query: 101 EILERFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSF 160
            + E+ D S+D+ Q + K+        A+   A   D    V  KK K            
Sbjct: 84  ILFEKADYSIDKAQGLLKKP-------AIETHASTSD----VANKKPK------------ 143

Query: 161 ESSVKVATKDRRTLGVKPKVPF---HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGS 220
                           K K+P+   H   + +PQ  F +  NN+    E VW  +  +  
Sbjct: 144 ----------------KEKLPYKVIHAAHLTKPQLRFRVQPNNSR---EFVWSWKLTEKP 203

Query: 221 RFVHPLEKLSVLDFVD-----KINEDFQP-----VYPP------------SLDCTPFKFI 280
             + PLEK+     +D      +   ++P     VYPP            S+D T   ++
Sbjct: 204 HSLVPLEKIIAQVKLDPSLKNSLPHPYEPEIQNSVYPPWVSEMSNPIDTGSVDETEPIWV 263

Query: 281 EEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGP 340
              + L ++  +L+   E AVDLEH+ YRSF+G  CLMQIS R +D++VDTL+LR  +  
Sbjct: 264 STESQLSDMLKELQNSKEIAVDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREEL-E 323

Query: 341 YLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVLKLERNSLEYLLHH 400
            L  VF +P+  KV HGA  D++WLQRDFG+Y+ NLFDT   A++VL  E + L +LL  
Sbjct: 324 ALNVVFTNPNIIKVFHGATMDIIWLQRDFGLYVVNLFDT-YYATKVLGFEGHGLAFLLQK 383

Query: 401 FCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLSSMPRESEES---- 460
           +C   A+K YQ ADWR+RPLP EML+YA+ DTHYLLYI+D +R +L S   E +E+    
Sbjct: 384 YCDYDADKRYQMADWRIRPLPREMLKYAQSDTHYLLYIWDHLRNELISKSAERKENLMQS 443

Query: 461 ---------------------------------------------DLPLVESLFEWRDIV 520
                                                         L +  +L +WRD V
Sbjct: 444 VFNSSKQISLRKYELEPYDPIYGLGTDGWRNVLTKFGSSKIIGREALMIYRALHDWRDSV 503

Query: 521 ARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHS-MLN 528
           AR EDES  Y+LPN+ L+ IA   PV    +  + K         +  IV +++ +  L 
Sbjct: 504 ARKEDESVRYVLPNRLLIAIAASKPVEAADVFSISKQLTPIARMYVEDIVKVVQEAEKLY 548

BLAST of Carg19578 vs. ExPASy TrEMBL
Match: A0A6J1GEI0 (protein RRP6-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111453438 PE=4 SV=1)

HSP 1 Score: 1699.1 bits (4399), Expect = 0.0e+00
Identity = 885/936 (94.55%), Postives = 886/936 (94.66%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
           EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
           HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
           YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
           VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420

Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
           SMPRESEESDLPLVE                                           SL
Sbjct: 421 SMPRESEESDLPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLAVAASL 480

Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
           FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540

Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
           RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600

Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
           TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660

Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
           PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
           LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKPCPTDEIIMLEDDS 780

Query: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840
           DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE
Sbjct: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840

Query: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR----DPKASKNTGAKS 890
           QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR    DPKASKNTGAKS
Sbjct: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKREDDKDPKASKNTGAKS 900

BLAST of Carg19578 vs. ExPASy TrEMBL
Match: A0A6J1IRZ7 (protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111478169 PE=4 SV=1)

HSP 1 Score: 1648.3 bits (4267), Expect = 0.0e+00
Identity = 862/940 (91.70%), Postives = 872/940 (92.77%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
           EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDR+TLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRKTLGVKPKVPF 180

Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
           HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240

Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
           YPPSLDCTPFKFIEEVNDLK+LAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKKLAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300

Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
           VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRD+VWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDIVWLQRDFGIYICNLFDTGQ-ASRVL 360

Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
           KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420

Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
           SMP ESEESD+PLVE                                           SL
Sbjct: 421 SMPHESEESDIPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLSVAASL 480

Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
           FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540

Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
           RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600

Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
           TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHS HPVLNGMGPTT ELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSTHPVLNGMGPTTLELGEHSNGDKY 660

Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
           PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTD KDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTLPFHSF 720

Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
           LGTSE LKSVVEPTTMT LK QNSEAP AESTK+SNIELP MPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEQLKSVVEPTTMTTLKTQNSEAPVAESTKTSNIELPAMPVSKPCPTDEIIMLEDDS 780

Query: 781 D----DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCL 840
           D    DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD  N+DEPMSLSELSSSFQKCL
Sbjct: 781 DDDDEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD--NNDEPMSLSELSSSFQKCL 840

Query: 841 NSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK----RDPKASKNT 890
           NSNEQAMNL+ETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK    +DPKASK  
Sbjct: 841 NSNEQAMNLRETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKLEDDKDPKASKIA 900

BLAST of Carg19578 vs. ExPASy TrEMBL
Match: A0A5A7TI59 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00910 PE=4 SV=1)

HSP 1 Score: 1468.0 bits (3799), Expect = 0.0e+00
Identity = 777/951 (81.70%), Postives = 823/951 (86.54%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVW +EMA+PED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEE+
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHD-SFESSVKVATKDRRTLGVKPKVP 180
           EESGRAVALTAD DDGFQLVCGKKKK+P+H DE+HD SFESSVKVATKDR+TLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQP 240
           FHIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG+RFVHPLEK SVLDFVDKI+EDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 VYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           +YPPSLDCTPFKFIEEVNDLKELAAKLR  NEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 FVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRV 360
           +VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRV
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRV 360

Query: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKL 420
           LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL
Sbjct: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL 420

Query: 421 SSMPRESEESDLPLVE-------------------------------------------S 480
           SSMP E+EESD PLVE                                            
Sbjct: 421 SSMPHEAEESDPPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAG 480

Query: 481 LFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTI 540
           LFEWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IERNLASIVTI
Sbjct: 481 LFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTI 540

Query: 541 IRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVD 600
           IRHSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT      I  +K+SAVD
Sbjct: 541 IRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------ILNMKNSAVD 600

Query: 601 NTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG------MGPTTSELGE 660
           NT SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS+HPVLNG      +GPTTSE  +
Sbjct: 601 NTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEPSK 660

Query: 661 HSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSV 720
           HSNGDKYPVA V+GVNI+LQKKTNRGGLGSLLGNSAPKRKLDTD KDKEE+KLDKIRSSV
Sbjct: 661 HSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRSSV 720

Query: 721 TLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEI 780
           TLPFHSFLGTSE LKSV EPTT+TALK QNSE PAAES KS+N+E P +PV K  PTDEI
Sbjct: 721 TLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTDEI 780

Query: 781 IMLEDDSD--------DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSL 840
           IMLEDDSD        DEDEEL  V E ATDEPKLKG SASSPLEIDD     DDEPMSL
Sbjct: 781 IMLEDDSDDNVEDEDGDEDEELRAVDE-ATDEPKLKGLSASSPLEIDD-----DDEPMSL 840

Query: 841 SELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK-- 890
           SELSSSFQKCLNSNEQAMNL ETD+ G QS FLQIKPFDYEAARK++ FGEDLEEDS+  
Sbjct: 841 SELSSSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPE 900

BLAST of Carg19578 vs. ExPASy TrEMBL
Match: A0A1S3B475 (protein RRP6-like 2 OS=Cucumis melo OX=3656 GN=LOC103485997 PE=4 SV=1)

HSP 1 Score: 1468.0 bits (3799), Expect = 0.0e+00
Identity = 777/951 (81.70%), Postives = 823/951 (86.54%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVW +EMA+PED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEE+
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHD-SFESSVKVATKDRRTLGVKPKVP 180
           EESGRAVALTAD DDGFQLVCGKKKK+P+H DE+HD SFESSVKVATKDR+TLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQP 240
           FHIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG+RFVHPLEK SVLDFVDKI+EDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 VYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           +YPPSLDCTPFKFIEEVNDLKELAAKLR  NEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 FVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRV 360
           +VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRV
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRV 360

Query: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKL 420
           LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL
Sbjct: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL 420

Query: 421 SSMPRESEESDLPLVE-------------------------------------------S 480
           SSMP E+EESD PLVE                                            
Sbjct: 421 SSMPHEAEESDPPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAG 480

Query: 481 LFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTI 540
           LFEWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IERNLASIVTI
Sbjct: 481 LFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTI 540

Query: 541 IRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVD 600
           IRHSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT      I  +K+SAVD
Sbjct: 541 IRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------ILNMKNSAVD 600

Query: 601 NTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG------MGPTTSELGE 660
           NT SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS+HPVLNG      +GPTTSE  +
Sbjct: 601 NTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEPSK 660

Query: 661 HSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSV 720
           HSNGDKYPVA V+GVNI+LQKKTNRGGLGSLLGNSAPKRKLDTD KDKEE+KLDKIRSSV
Sbjct: 661 HSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRSSV 720

Query: 721 TLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEI 780
           TLPFHSFLGTSE LKSV EPTT+TALK QNSE PAAES KS+N+E P +PV K  PTDEI
Sbjct: 721 TLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTDEI 780

Query: 781 IMLEDDSD--------DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSL 840
           IMLEDDSD        DEDEEL  V E ATDEPKLKG SASSPLEIDD     DDEPMSL
Sbjct: 781 IMLEDDSDDNVEDEDGDEDEELRAVDE-ATDEPKLKGLSASSPLEIDD-----DDEPMSL 840

Query: 841 SELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK-- 890
           SELSSSFQKCLNSNEQAMNL ETD+ G QS FLQIKPFDYEAARK++ FGEDLEEDS+  
Sbjct: 841 SELSSSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPE 900

BLAST of Carg19578 vs. ExPASy TrEMBL
Match: A0A5D3DTL6 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00180 PE=4 SV=1)

HSP 1 Score: 1464.5 bits (3790), Expect = 0.0e+00
Identity = 777/960 (80.94%), Postives = 823/960 (85.73%), Query Frame = 0

Query: 1   MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
           MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1   MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60

Query: 61  QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
           QSQSMLETIGSSAEVW +EMA+PED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEE+
Sbjct: 61  QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120

Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHD-SFESSVKVATKDRRTLGVKPKVP 180
           EESGRAVALTAD DDGFQLVCGKKKK+P+H DE+HD SFESSVKVATKDR+TLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180

Query: 181 FHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQP 240
           FHIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG+RFVHPLEK SVLDFVDKI+EDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240

Query: 241 VYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
           +YPPSLDCTPFKFIEEVNDLKELAAKLR  NEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300

Query: 301 FVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRV 360
           +VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRV
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRV 360

Query: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKL 420
           LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL
Sbjct: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL 420

Query: 421 SSMPRESEESDLPLVE-------------------------------------------- 480
           SSMP E+EESD PLVE                                            
Sbjct: 421 SSMPHEAEESDPPLVEEITFNFVTSSSFXLYEKELLTESSYLYVYGLVFSILGLQGSGFD 480

Query: 481 --------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIE 540
                    LFEWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IE
Sbjct: 481 AQQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIE 540

Query: 541 RNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAI 600
           RNLASIVTIIRHSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT      I
Sbjct: 541 RNLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------I 600

Query: 601 PIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG------M 660
             +K+SAVDNT SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS+HPVLNG      +
Sbjct: 601 LNMKNSAVDNTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQV 660

Query: 661 GPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEEN 720
           GPTTSE  +HSNGDKYPVA V+GVNI+LQKKTNRGGLGSLLGNSAPKRKLDTD KDKEE+
Sbjct: 661 GPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEES 720

Query: 721 KLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPV 780
           KLDKIRSSVTLPFHSFLGTSE LKSV EPTT+TALK QNSE PAAES KS+N+E P +PV
Sbjct: 721 KLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPV 780

Query: 781 SKSCPTDEIIMLEDDSD--------DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDD 840
            K  PTDEIIMLEDDSD        DEDEEL  V E ATDEPKLKG SASSPLEIDD   
Sbjct: 781 PKPFPTDEIIMLEDDSDDNVEDEDGDEDEELRAVDE-ATDEPKLKGLSASSPLEIDD--- 840

Query: 841 NNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGE 890
             DDEPMSLSELSSSFQKCLNSNEQAMNL ETD+ G QS FLQIKPFDYEAARK++ FGE
Sbjct: 841 --DDEPMSLSELSSSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGE 900

BLAST of Carg19578 vs. TAIR 10
Match: AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 764.2 bits (1972), Expect = 1.1e-220
Identity = 465/945 (49.21%), Postives = 584/945 (61.80%), Query Frame = 0

Query: 1   MDVDQSD-SQKAQTLQSLTSG-SLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSI 60
           MDVD+S  S K ++L+ L  G S  S+LS+L+ SS+ IP  +DFHFYYNFDEFK PI  I
Sbjct: 6   MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65

Query: 61  DRQSQSMLETIGSSAEVWGKEMAFPEDNDDAY--DWLVNVNDEILERFDVSLDEFQRIRK 120
              SQS L TIG S +VWGK M FP D DD Y  DWL NVNDE++ERFDVS+DEFQRIRK
Sbjct: 66  TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125

Query: 121 EEEEEESGRAVALTADADDGFQLVCGKKKKSPSH---GDEVHDSFES--SVKVATKDRRT 180
             +E+E GR+V +  D DDGFQ+V GKKKK   +   G    +   S   VK+A +D+ +
Sbjct: 126 --KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNS 185

Query: 181 LGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVD 240
            G K KVPFH+PTI++PQ+E+NILVNNAN PFEHVWL+RSED  R +HPLEK SVLDFVD
Sbjct: 186 SG-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVD 245

Query: 241 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 300
           K   + +PV P  L+ TPFKF++EV DLKEL AKLR   EFAVDLEHNQYRSFQGLTCLM
Sbjct: 246 KDVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLM 305

Query: 301 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 360
           QISTRTED++VDT KLRIH+GPYLRE+FKDP K+KV+HGADRD++WLQRDFGIY+CNLFD
Sbjct: 306 QISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFD 365

Query: 361 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 420
           TGQ ASRVL LERNSLE+LL HFCGV ANKEYQNADWR+RPLPEEM RYAREDTHYLLYI
Sbjct: 366 TGQ-ASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYI 425

Query: 421 YDLMRKKLSSMPRESEESDLPLVE------------------------------------ 480
           YDL++ +L  M ++   +D PL+E                                    
Sbjct: 426 YDLIKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNA 485

Query: 481 -------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIER 540
                   L EWRD +ARAEDESTGY+LPNK LLEIAK+MP ++ KLRR+LKSKH +IER
Sbjct: 486 AQLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIER 545

Query: 541 NLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIP 600
           N+ S+V++IR SM + +AFE AA  LK+V      ++N                    I 
Sbjct: 546 NVDSVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIE-----------------PIS 605

Query: 601 IVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSEL 660
             KD    + AS  +  +SSQ +                     S   ++  MG   +  
Sbjct: 606 EKKDLHTGDVASPSLKENSSQLE---------------------STRDLI--MGAANTNE 665

Query: 661 GEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRS 720
           G       +  A+VS   + + KK +  GLG+LLGN+A K+K  TD K KE+ KL++IRS
Sbjct: 666 GRGLGSGLFGSAKVSAA-VRISKKPS-SGLGALLGNAASKKKSRTDEKVKEDVKLEQIRS 725

Query: 721 SVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTD 780
           SV L FHSF       KS  E +     K +   +               MP S S   D
Sbjct: 726 SVNLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSS--------------TMPASVS-KED 785

Query: 781 EIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN---DDEPMSLSEL 840
            +  L+DDS++  E +         E K+        + +++ D+     +DEPMSLSEL
Sbjct: 786 GVKELKDDSEEASEIVG--TSGRVSESKVSSSEMGDIILLENGDEKKVDAEDEPMSLSEL 845

Query: 841 SSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLE-EDSKRDPK 890
           S++FQKC  S  ++   Q      KQ+ FL I+PFDYEAARK+++FGE  +    KR+  
Sbjct: 846 STNFQKCFKSMNKSKKAQ------KQTEFLNIEPFDYEAARKEVKFGEGHKGRQGKREAA 869

BLAST of Carg19578 vs. TAIR 10
Match: AT1G54440.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 498.0 bits (1281), Expect = 1.5e-140
Identity = 303/685 (44.23%), Postives = 398/685 (58.10%), Query Frame = 0

Query: 103 RFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSV 162
           RFD  +DEF+R RK EE+ +    V + A++D GF                         
Sbjct: 2   RFDDPMDEFKRNRKMEEDSKKVIDVKV-AESDKGFAKF---------------------- 61

Query: 163 KVATKDRRTLGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLE 222
                       K +VPFHIPT+ +PQ+E+ ILV+NAN PFEHV L++SEDG RF+HPLE
Sbjct: 62  -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121

Query: 223 KLSVLDFVDKINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYR 282
           +LSV+DFVD+   + +PV P  L+ TPFK +EEV DL++LAA L+   EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181

Query: 283 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDF 342
           +FQGLTCLMQISTRTED++VD  KL  H+GPYLRE+FKDP K+KV+HGADRD++WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241

Query: 343 GIYICNLFDTGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAR 402
           GIY+CNLFDTGQ ASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 GIYVCNLFDTGQ-ASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301

Query: 403 EDTHYLLYIYDLMRKKLSSMPRESEESDLPLVE--------------------------- 462
           EDTHYLLYIYD+MR +L +M +E E+SD PLVE                           
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361

Query: 463 ----------------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLL 522
                            L EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ + +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421

Query: 523 KSKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPD 582
           KSK  ++ERN  +++++IR SM N++AFE   + LK+ R E   E N      +      
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481

Query: 583 TSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLN 642
            S+L          +++    D     SS   V PL+   R     K V V+ ++ P + 
Sbjct: 482 ASSL----------SLEKVCVDDSKKQSSGFGVLPLK---RKLESDKTV-VEKNIEPKIE 541

Query: 643 GMGPTTSELGEHSNGDKYPVAQVSGVNITL-QKKTNRGGLGSLLGNSAPKRKLDTDTKDK 702
             G   S             + +S   + +   K    G G LL     KRK ++D K K
Sbjct: 542 KTGTEAS------------ASSLSSKKVCVDDSKKQSSGFGVLLS----KRKFESDNKVK 601

Query: 703 EENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPV 744
           EE K+ K +    +         +  +S  + T     KA ++    +E+    +  L  
Sbjct: 602 EEVKVSKSKPDKVIIVVDDDDDDDDDESYEQST-----KAADALDRVSETPSKGSPSLTQ 613

BLAST of Carg19578 vs. TAIR 10
Match: AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 493.0 bits (1268), Expect = 4.9e-139
Identity = 303/687 (44.10%), Postives = 398/687 (57.93%), Query Frame = 0

Query: 103 RFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSV 162
           RFD  +DEF+R RK EE+ +    V + A++D GF                         
Sbjct: 2   RFDDPMDEFKRNRKMEEDSKKVIDVKV-AESDKGFAKF---------------------- 61

Query: 163 KVATKDRRTLGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLE 222
                       K +VPFHIPT+ +PQ+E+ ILV+NAN PFEHV L++SEDG RF+HPLE
Sbjct: 62  -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121

Query: 223 KLSVLDFVDKINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYR 282
           +LSV+DFVD+   + +PV P  L+ TPFK +EEV DL++LAA L+   EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181

Query: 283 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDF 342
           +FQGLTCLMQISTRTED++VD  KL  H+GPYLRE+FKDP K+KV+HGADRD++WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241

Query: 343 GIYICNLFDTGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAR 402
           GIY+CNLFDTGQ ASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 GIYVCNLFDTGQ-ASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301

Query: 403 EDTHYLLYIYDLMRKKLSSMPRESEESDLPLVE--------------------------- 462
           EDTHYLLYIYD+MR +L +M +E E+SD PLVE                           
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361

Query: 463 ----------------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLL 522
                            L EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ + +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421

Query: 523 KSKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPD 582
           KSK  ++ERN  +++++IR SM N++AFE   + LK+ R E   E N      +      
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481

Query: 583 TSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLN 642
            S+L          +++    D     SS   V PL+   R     K V V+ ++ P + 
Sbjct: 482 ASSL----------SLEKVCVDDSKKQSSGFGVLPLK---RKLESDKTV-VEKNIEPKIE 541

Query: 643 GMGPTTSELGEHSNGDKYPVAQVSGVNITL-QKKTNRGGLGSLLGNSAPKRKLDTDTK-- 702
             G   S             + +S   + +   K    G G LL     KRK ++D K  
Sbjct: 542 KTGTEAS------------ASSLSSKKVCVDDSKKQSSGFGVLLS----KRKFESDNKLQ 601

Query: 703 DKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIEL 744
            KEE K+ K +    +         +  +S  + T     KA ++    +E+    +  L
Sbjct: 602 VKEEVKVSKSKPDKVIIVVDDDDDDDDDESYEQST-----KAADALDRVSETPSKGSPSL 615

BLAST of Carg19578 vs. TAIR 10
Match: AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 195.3 bits (495), Expect = 2.1e-49
Identity = 129/350 (36.86%), Postives = 172/350 (49.14%), Query Frame = 0

Query: 187 RPQDEF-NILVNNANQPFEHVWLQRSEDGS----RFVHPLE-KLSVLDFVDKINEDFQPV 246
           +PQ  F  +L +N+   F+H+ L  +   S       HP E +++VL    +I   F   
Sbjct: 50  KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRG 109

Query: 247 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 306
                    + ++E  + LKELA  L +E  FAVD E +  RSF G T L+QIST  EDF
Sbjct: 110 ECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDF 169

Query: 307 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 366
           +VDT+ L   V   LR VF DP+  KV HGAD DV+WLQRDF IY+ N+FDT + A  VL
Sbjct: 170 LVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAK-ACEVL 229

Query: 367 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 426
              + SL YLL   CGVA NK  Q  DWR RPL EEM+RYAR D HYLLYI D +  +L 
Sbjct: 230 SKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELK 289

Query: 427 SMPRES---------------------------EESDLP--------------------- 476
            +  +S                           E  D P                     
Sbjct: 290 QLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSN 349

BLAST of Carg19578 vs. TAIR 10
Match: AT2G32415.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )

HSP 1 Score: 195.3 bits (495), Expect = 2.1e-49
Identity = 129/350 (36.86%), Postives = 172/350 (49.14%), Query Frame = 0

Query: 187 RPQDEF-NILVNNANQPFEHVWLQRSEDGS----RFVHPLE-KLSVLDFVDKINEDFQPV 246
           +PQ  F  +L +N+   F+H+ L  +   S       HP E +++VL    +I   F   
Sbjct: 50  KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRG 109

Query: 247 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 306
                    + ++E  + LKELA  L +E  FAVD E +  RSF G T L+QIST  EDF
Sbjct: 110 ECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDF 169

Query: 307 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 366
           +VDT+ L   V   LR VF DP+  KV HGAD DV+WLQRDF IY+ N+FDT + A  VL
Sbjct: 170 LVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAK-ACEVL 229

Query: 367 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 426
              + SL YLL   CGVA NK  Q  DWR RPL EEM+RYAR D HYLLYI D +  +L 
Sbjct: 230 SKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELK 289

Query: 427 SMPRES---------------------------EESDLP--------------------- 476
            +  +S                           E  D P                     
Sbjct: 290 QLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSN 349

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7033657.10.0e+00100.00Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6603474.10.0e+0096.83Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022950321.10.0e+0094.55protein RRP6-like 2 [Cucurbita moschata][more]
XP_023544636.10.0e+0092.66protein RRP6-like 2 [Cucurbita pepo subsp. pepo][more]
XP_022978083.10.0e+0091.70protein RRP6-like 2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A9LLI71.6e-21949.21Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1[more]
Q0WVE82.1e-13944.23Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1[more]
Q017801.4e-6936.87Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2[more]
P569609.8e-6837.07Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2[more]
Q101465.4e-5830.58Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
Match NameE-valueIdentityDescription
A0A6J1GEI00.0e+0094.55protein RRP6-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111453438 PE=4 SV=1[more]
A0A6J1IRZ70.0e+0091.70protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111478169 PE=4 SV=1[more]
A0A5A7TI590.0e+0081.70Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G0... [more]
A0A1S3B4750.0e+0081.70protein RRP6-like 2 OS=Cucumis melo OX=3656 GN=LOC103485997 PE=4 SV=1[more]
A0A5D3DTL60.0e+0080.94Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G0... [more]
Match NameE-valueIdentityDescription
AT5G35910.11.1e-22049.21Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT1G54440.11.5e-14044.23Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT1G54440.24.9e-13944.10Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT2G32415.12.1e-4936.86Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
AT2G32415.22.1e-4936.86Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..121
NoneNo IPR availableCOILSCoilCoilcoord: 256..276
NoneNo IPR availableCOILSCoilCoilcoord: 507..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 780..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 828..889
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 634..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 828..872
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 731..747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..718
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..816
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 9..426
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 432..871
NoneNo IPR availableCDDcd06147Rrp6p_like_exocoord: 246..435
e-value: 4.08194E-108
score: 329.173
IPR002121HRDC domainSMARTSM00341hrdc7coord: 427..506
e-value: 3.5E-8
score: 43.2
IPR002121HRDC domainPFAMPF00570HRDCcoord: 431..497
e-value: 3.4E-14
score: 52.6
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 427..507
score: 18.33308
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 250..420
e-value: 1.5E-47
score: 174.0
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 253..419
e-value: 8.9E-44
score: 149.3
IPR012588Exosome-associated factor Rrp6, N-terminalPFAMPF08066PMC2NTcoord: 32..112
e-value: 6.2E-9
score: 36.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 179..443
e-value: 2.9E-82
score: 278.1
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 432..871
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 9..426
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 427..500
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 185..431

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19578-RACarg19578-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0044237 cellular metabolic process
biological_process GO:0071040 nuclear polyadenylation-dependent antisense transcript catabolic process
biological_process GO:0071039 nuclear polyadenylation-dependent CUT catabolic process
biological_process GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process
biological_process GO:0071036 nuclear polyadenylation-dependent snoRNA catabolic process
biological_process GO:0071037 nuclear polyadenylation-dependent snRNA catabolic process
biological_process GO:0071038 nuclear polyadenylation-dependent tRNA catabolic process
biological_process GO:0071051 polyadenylation-dependent snoRNA 3'-end processing
biological_process GO:0071044 histone mRNA catabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0006139 nucleobase-containing compound metabolic process
cellular_component GO:0000176 nuclear exosome (RNase complex)
cellular_component GO:0005730 nucleolus
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0000175 3'-5'-exoribonuclease activity
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding