Homology
BLAST of Carg19578 vs. NCBI nr
Match:
KAG7033657.1 (Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1741.1 bits (4508), Expect = 0.0e+00
Identity = 889/889 (100.00%), Postives = 889/889 (100.00%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
Query: 421 SMPRESEESDLPLVESLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLK 480
SMPRESEESDLPLVESLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLK
Sbjct: 421 SMPRESEESDLPLVESLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLK 480
Query: 481 SKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDT 540
SKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDT
Sbjct: 481 SKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDT 540
Query: 541 SNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG 600
SNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG
Sbjct: 541 SNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG 600
Query: 601 MGPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEE 660
MGPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEE
Sbjct: 601 MGPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEE 660
Query: 661 NKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMP 720
NKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMP
Sbjct: 661 NKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMP 720
Query: 721 VSKSCPTDEIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPM 780
VSKSCPTDEIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPM
Sbjct: 721 VSKSCPTDEIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPM 780
Query: 781 SLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK 840
SLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK
Sbjct: 781 SLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK 840
Query: 841 RDPKASKNTGAKSDLDLNRVHKNSESVELPQGKRRHAFPATGNRSATFR 890
RDPKASKNTGAKSDLDLNRVHKNSESVELPQGKRRHAFPATGNRSATFR
Sbjct: 841 RDPKASKNTGAKSDLDLNRVHKNSESVELPQGKRRHAFPATGNRSATFR 889
BLAST of Carg19578 vs. NCBI nr
Match:
KAG6603474.1 (Protein RRP6-like 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1713.7 bits (4437), Expect = 0.0e+00
Identity = 887/916 (96.83%), Postives = 887/916 (96.83%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360
Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
Query: 421 SMPRESEESDLPLVE---------------------------SLFEWRDIVARAEDESTG 480
SMPRESEESDLPLVE SLFEWRDIVARAEDESTG
Sbjct: 421 SMPRESEESDLPLVEVYKRIHTFYVYGLQGSGFNAQQLAVAASLFEWRDIVARAEDESTG 480
Query: 481 YILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHSMLNSSAFEEAAER 540
YILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHSMLNSSAFEEAAER
Sbjct: 481 YILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHSMLNSSAFEEAAER 540
Query: 541 LKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVA 600
LKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVA
Sbjct: 541 LKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVA 600
Query: 601 PLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPVAQVSGVNITLQKKT 660
PLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPVAQVSGVNITLQKKT
Sbjct: 601 PLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPVAQVSGVNITLQKKT 660
Query: 661 NRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTM 720
NRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTM
Sbjct: 661 NRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTM 720
Query: 721 TALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDSDDEDEELHPVAEAATD 780
TALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDSDDEDEELHPVAEAATD
Sbjct: 721 TALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDSDDEDEELHPVAEAATD 780
Query: 781 EPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSG 840
EPKLKGFSASSPLEI DDDDNNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSG
Sbjct: 781 EPKLKGFSASSPLEI-DDDDNNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSG 840
Query: 841 FLQIKPFDYEAARKQIEFGEDLEEDSKRDPKASKNTGAKSDLDLNRVHKNSESVELPQGK 890
FLQIKPFDYEAARKQIEFGEDLEEDSKRDPKASKNTGAKSDLDLNRVHKNSESVELPQGK
Sbjct: 841 FLQIKPFDYEAARKQIEFGEDLEEDSKRDPKASKNTGAKSDLDLNRVHKNSESVELPQGK 900
BLAST of Carg19578 vs. NCBI nr
Match:
XP_022950321.1 (protein RRP6-like 2 [Cucurbita moschata])
HSP 1 Score: 1699.1 bits (4399), Expect = 0.0e+00
Identity = 885/936 (94.55%), Postives = 886/936 (94.66%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360
Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
SMPRESEESDLPLVE SL
Sbjct: 421 SMPRESEESDLPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLAVAASL 480
Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKPCPTDEIIMLEDDS 780
Query: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840
DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE
Sbjct: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840
Query: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR----DPKASKNTGAKS 890
QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR DPKASKNTGAKS
Sbjct: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKREDDKDPKASKNTGAKS 900
BLAST of Carg19578 vs. NCBI nr
Match:
XP_023544636.1 (protein RRP6-like 2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1667.5 bits (4317), Expect = 0.0e+00
Identity = 871/940 (92.66%), Postives = 880/940 (93.62%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVND+ILERFDVSLDEFQRIRK EE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDDILERFDVSLDEFQRIRK--EE 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
EESGRAVA TADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVAFTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDG+RFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGTRFVHPLEKLSVLDFVDKINEDFQPV 240
Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360
Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
SMPRESEESDLPLVE SL
Sbjct: 421 SMPRESEESDLPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLAVAASL 480
Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
TA+DQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY
Sbjct: 601 TANDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTD KDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDIKDKEENKLDKIRSSVTLPFHSF 720
Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELP MPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPAMPVSKPCPTDEIIMLEDDS 780
Query: 781 D----DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCL 840
D DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN DEP+SLSELSSSFQKCL
Sbjct: 781 DDDDEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN-DEPISLSELSSSFQKCL 840
Query: 841 NSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK----RDPKASKNT 890
NSNEQAMNLQETDDSGKQSGFLQI+PFDY+AARKQIEFGEDLEEDSK +DPKASKN
Sbjct: 841 NSNEQAMNLQETDDSGKQSGFLQIQPFDYKAARKQIEFGEDLEEDSKLEDNKDPKASKNA 900
BLAST of Carg19578 vs. NCBI nr
Match:
XP_022978083.1 (protein RRP6-like 2 [Cucurbita maxima])
HSP 1 Score: 1648.3 bits (4267), Expect = 0.0e+00
Identity = 862/940 (91.70%), Postives = 872/940 (92.77%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDR+TLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRKTLGVKPKVPF 180
Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
YPPSLDCTPFKFIEEVNDLK+LAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKKLAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRD+VWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDIVWLQRDFGIYICNLFDTGQ-ASRVL 360
Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
SMP ESEESD+PLVE SL
Sbjct: 421 SMPHESEESDIPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLSVAASL 480
Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHS HPVLNGMGPTT ELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSTHPVLNGMGPTTLELGEHSNGDKY 660
Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTD KDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTLPFHSF 720
Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
LGTSE LKSVVEPTTMT LK QNSEAP AESTK+SNIELP MPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEQLKSVVEPTTMTTLKTQNSEAPVAESTKTSNIELPAMPVSKPCPTDEIIMLEDDS 780
Query: 781 D----DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCL 840
D DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD N+DEPMSLSELSSSFQKCL
Sbjct: 781 DDDDEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD--NNDEPMSLSELSSSFQKCL 840
Query: 841 NSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK----RDPKASKNT 890
NSNEQAMNL+ETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK +DPKASK
Sbjct: 841 NSNEQAMNLRETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKLEDDKDPKASKIA 900
BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match:
A9LLI7 (Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1)
HSP 1 Score: 764.2 bits (1972), Expect = 1.6e-219
Identity = 465/945 (49.21%), Postives = 584/945 (61.80%), Query Frame = 0
Query: 1 MDVDQSD-SQKAQTLQSLTSG-SLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSI 60
MDVD+S S K ++L+ L G S S+LS+L+ SS+ IP +DFHFYYNFDEFK PI I
Sbjct: 6 MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65
Query: 61 DRQSQSMLETIGSSAEVWGKEMAFPEDNDDAY--DWLVNVNDEILERFDVSLDEFQRIRK 120
SQS L TIG S +VWGK M FP D DD Y DWL NVNDE++ERFDVS+DEFQRIRK
Sbjct: 66 TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125
Query: 121 EEEEEESGRAVALTADADDGFQLVCGKKKKSPSH---GDEVHDSFES--SVKVATKDRRT 180
+E+E GR+V + D DDGFQ+V GKKKK + G + S VK+A +D+ +
Sbjct: 126 --KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNS 185
Query: 181 LGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVD 240
G K KVPFH+PTI++PQ+E+NILVNNAN PFEHVWL+RSED R +HPLEK SVLDFVD
Sbjct: 186 SG-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVD 245
Query: 241 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 300
K + +PV P L+ TPFKF++EV DLKEL AKLR EFAVDLEHNQYRSFQGLTCLM
Sbjct: 246 KDVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLM 305
Query: 301 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 360
QISTRTED++VDT KLRIH+GPYLRE+FKDP K+KV+HGADRD++WLQRDFGIY+CNLFD
Sbjct: 306 QISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFD 365
Query: 361 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 420
TGQ ASRVL LERNSLE+LL HFCGV ANKEYQNADWR+RPLPEEM RYAREDTHYLLYI
Sbjct: 366 TGQ-ASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYI 425
Query: 421 YDLMRKKLSSMPRESEESDLPLVE------------------------------------ 480
YDL++ +L M ++ +D PL+E
Sbjct: 426 YDLIKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNA 485
Query: 481 -------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIER 540
L EWRD +ARAEDESTGY+LPNK LLEIAK+MP ++ KLRR+LKSKH +IER
Sbjct: 486 AQLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIER 545
Query: 541 NLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIP 600
N+ S+V++IR SM + +AFE AA LK+V ++N I
Sbjct: 546 NVDSVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIE-----------------PIS 605
Query: 601 IVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSEL 660
KD + AS + +SSQ + S ++ MG +
Sbjct: 606 EKKDLHTGDVASPSLKENSSQLE---------------------STRDLI--MGAANTNE 665
Query: 661 GEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRS 720
G + A+VS + + KK + GLG+LLGN+A K+K TD K KE+ KL++IRS
Sbjct: 666 GRGLGSGLFGSAKVSAA-VRISKKPS-SGLGALLGNAASKKKSRTDEKVKEDVKLEQIRS 725
Query: 721 SVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTD 780
SV L FHSF KS E + K + + MP S S D
Sbjct: 726 SVNLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSS--------------TMPASVS-KED 785
Query: 781 EIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN---DDEPMSLSEL 840
+ L+DDS++ E + E K+ + +++ D+ +DEPMSLSEL
Sbjct: 786 GVKELKDDSEEASEIVG--TSGRVSESKVSSSEMGDIILLENGDEKKVDAEDEPMSLSEL 845
Query: 841 SSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLE-EDSKRDPK 890
S++FQKC S ++ Q KQ+ FL I+PFDYEAARK+++FGE + KR+
Sbjct: 846 STNFQKCFKSMNKSKKAQ------KQTEFLNIEPFDYEAARKEVKFGEGHKGRQGKREAA 869
BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match:
Q0WVE8 (Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1)
HSP 1 Score: 498.0 bits (1281), Expect = 2.1e-139
Identity = 303/685 (44.23%), Postives = 398/685 (58.10%), Query Frame = 0
Query: 103 RFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSV 162
RFD +DEF+R RK EE+ + V + A++D GF
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVIDVKV-AESDKGFAKF---------------------- 61
Query: 163 KVATKDRRTLGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLE 222
K +VPFHIPT+ +PQ+E+ ILV+NAN PFEHV L++SEDG RF+HPLE
Sbjct: 62 -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121
Query: 223 KLSVLDFVDKINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYR 282
+LSV+DFVD+ + +PV P L+ TPFK +EEV DL++LAA L+ EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181
Query: 283 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDF 342
+FQGLTCLMQISTRTED++VD KL H+GPYLRE+FKDP K+KV+HGADRD++WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241
Query: 343 GIYICNLFDTGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAR 402
GIY+CNLFDTGQ ASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 GIYVCNLFDTGQ-ASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301
Query: 403 EDTHYLLYIYDLMRKKLSSMPRESEESDLPLVE--------------------------- 462
EDTHYLLYIYD+MR +L +M +E E+SD PLVE
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361
Query: 463 ----------------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLL 522
L EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ + +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421
Query: 523 KSKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPD 582
KSK ++ERN +++++IR SM N++AFE + LK+ R E E N +
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481
Query: 583 TSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLN 642
S+L +++ D SS V PL+ R K V V+ ++ P +
Sbjct: 482 ASSL----------SLEKVCVDDSKKQSSGFGVLPLK---RKLESDKTV-VEKNIEPKIE 541
Query: 643 GMGPTTSELGEHSNGDKYPVAQVSGVNITL-QKKTNRGGLGSLLGNSAPKRKLDTDTKDK 702
G S + +S + + K G G LL KRK ++D K K
Sbjct: 542 KTGTEAS------------ASSLSSKKVCVDDSKKQSSGFGVLLS----KRKFESDNKVK 601
Query: 703 EENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPV 744
EE K+ K + + + +S + T KA ++ +E+ + L
Sbjct: 602 EEVKVSKSKPDKVIIVVDDDDDDDDDESYEQST-----KAADALDRVSETPSKGSPSLTQ 613
BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match:
Q01780 (Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2)
HSP 1 Score: 266.2 bits (679), Expect = 1.4e-69
Identity = 191/518 (36.87%), Postives = 270/518 (52.12%), Query Frame = 0
Query: 16 SLTSGSLGSSLSKLAGSSQGIPA-GKDFHFYYNFDEFKIPIRSIDRQSQSMLETIGSSAE 75
S +LGS ++ + +S G+P G ++ FY +F F+ + Q +L+ + +
Sbjct: 34 SFVKFALGSVVA-VTKASGGLPQFGDEYDFYRSFPGFQ---AFCETQGDRLLQCMSRVMQ 93
Query: 76 VWG-----KEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEEE-ESGRAVA 135
G K+ + + +D +D LV+ ND ILER + LDE + K ++ +G V
Sbjct: 94 YHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVP 153
Query: 136 LTADADDGFQLV-CGKKKKSPS----HGDE-VHDSFESSVKVATKDRRTLG---VKPKVP 195
T + + GKK KS + H + + K+ + L +KP
Sbjct: 154 KTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQ 213
Query: 196 FHIPTI------RRPQDEFNIL-VNNANQPFEHVWLQRSEDGSRFVHPLE-KLSVLDFVD 255
+P RPQD L V A F H + + F HP + +L+ D
Sbjct: 214 KPLPQALSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELNHFTPAD 273
Query: 256 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 315
+ + QP ++ TP FI +++L EL KL EFAVDLEH+ YRSF GLTCLM
Sbjct: 274 AVLQKPQPQLYRPIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLM 333
Query: 316 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 375
QISTRTEDF++DTL+LR + L E DP+ KV HGAD D+ WLQ+DFG+Y+ N+FD
Sbjct: 334 QISTRTEDFIIDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFD 393
Query: 376 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 435
T Q A+R+L L R+SL++LL +C V +NK+YQ ADWR+RPLPEEML YAR+DTHYLLYI
Sbjct: 394 THQ-AARLLNLGRHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYARDDTHYLLYI 453
Query: 436 YDLMRKKLSS-------------------------MPRESEESDLPL------------- 470
YD MR ++ P ++ES L L
Sbjct: 454 YDKMRLEMWERGNGQPVQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQL 513
BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match:
P56960 (Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2)
HSP 1 Score: 260.0 bits (663), Expect = 9.8e-68
Identity = 192/518 (37.07%), Postives = 267/518 (51.54%), Query Frame = 0
Query: 16 SLTSGSLGSSLSKLAGSSQGIPA-GKDFHFYYNFDEFKIPIRSIDRQSQSMLETIGSSAE 75
S +LGS ++ + +S G+P G ++ FY +F F+ + Q +L+ + +
Sbjct: 34 SFVKFALGSVVA-VTKASGGLPQFGDEYDFYRSFPAFQ---AFCETQGDRLLQCMSRVMQ 93
Query: 76 VWG-----KEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEEE-ESGRAVA 135
G K+ + + +D +D LV+ ND ILER + LDE + K ++ +G V
Sbjct: 94 YHGCRSNIKDRSKVTELEDKFDLLVDTNDVILERVGMLLDEASGVNKHQQPVLPAGLQVP 153
Query: 136 LTADADDGFQL-VCGKKKKSPS----HGDE-VHDSFESSVKVATKDRRTLG---VKPKVP 195
T + + GKK KS + H V K+ + L VKP
Sbjct: 154 KTIVSSWNRKAGEYGKKAKSETFRLLHAKNIVRPQLRFREKIDNSNTPFLPKIFVKPNAR 213
Query: 196 FHIPTI------RRPQDEFNIL-VNNANQPFEHVWLQRSEDGSRFVHPLE-KLSVLDFVD 255
+P RPQD L V A F H + + F HP + +L
Sbjct: 214 KPLPLALSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELDHFTPPQ 273
Query: 256 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 315
+ + +P ++ TP + +++L EL KL EFAVDLEH+ YRSF GLTCLM
Sbjct: 274 SVLQRPKPQLYRAVGETPCHLVSSLDELVELNEKLLGCQEFAVDLEHHSYRSFLGLTCLM 333
Query: 316 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 375
QISTRTEDF+VDTL+LR + L E DP+ KV HGAD D+ WLQ+DFG+Y+ N+FD
Sbjct: 334 QISTRTEDFIVDTLELRSDM-YILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFD 393
Query: 376 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 435
T Q A+R+L L R+SL++LL +CGV +NK+YQ ADWR+RPLPEEML YAR+DTHYLLYI
Sbjct: 394 THQ-AARLLNLARHSLDHLLRLYCGVESNKQYQLADWRIRPLPEEMLSYARDDTHYLLYI 453
Query: 436 YDLMRKKLSS-------------------------MPRESEESDLPL------------- 470
YD MR +L P ++ES L L
Sbjct: 454 YDRMRLELWERGNHQPVQLQVVWQRSRDICLKKFVKPIFTDESYLELYRKQKKHLNSQQL 513
BLAST of Carg19578 vs. ExPASy Swiss-Prot
Match:
Q10146 (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp6 PE=3 SV=2)
HSP 1 Score: 227.6 bits (579), Expect = 5.4e-58
Identity = 174/569 (30.58%), Postives = 262/569 (46.05%), Query Frame = 0
Query: 41 DFHFYYNFD-EFKIPIRSIDRQSQSMLETIGSSAE-VWGKEMAFPEDNDDAYDWLVNVND 100
D FY + D EF I+S+ + ++E + S + +++ ED D+ + + + D
Sbjct: 24 DIPFYKSIDTEFNENIKSVSSRFMRLIELLLSKVDRSRAEDIVDVEDIDNRWAEVSDTLD 83
Query: 101 EILERFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSF 160
+ E+ D S+D+ Q + K+ A+ A D V KK K
Sbjct: 84 ILFEKADYSIDKAQGLLKKP-------AIETHASTSD----VANKKPK------------ 143
Query: 161 ESSVKVATKDRRTLGVKPKVPF---HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGS 220
K K+P+ H + +PQ F + NN+ E VW + +
Sbjct: 144 ----------------KEKLPYKVIHAAHLTKPQLRFRVQPNNSR---EFVWSWKLTEKP 203
Query: 221 RFVHPLEKLSVLDFVD-----KINEDFQP-----VYPP------------SLDCTPFKFI 280
+ PLEK+ +D + ++P VYPP S+D T ++
Sbjct: 204 HSLVPLEKIIAQVKLDPSLKNSLPHPYEPEIQNSVYPPWVSEMSNPIDTGSVDETEPIWV 263
Query: 281 EEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHVGP 340
+ L ++ +L+ E AVDLEH+ YRSF+G CLMQIS R +D++VDTL+LR +
Sbjct: 264 STESQLSDMLKELQNSKEIAVDLEHHDYRSFRGFVCLMQISNREKDWIVDTLELREEL-E 323
Query: 341 YLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVLKLERNSLEYLLHH 400
L VF +P+ KV HGA D++WLQRDFG+Y+ NLFDT A++VL E + L +LL
Sbjct: 324 ALNVVFTNPNIIKVFHGATMDIIWLQRDFGLYVVNLFDT-YYATKVLGFEGHGLAFLLQK 383
Query: 401 FCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLSSMPRESEES---- 460
+C A+K YQ ADWR+RPLP EML+YA+ DTHYLLYI+D +R +L S E +E+
Sbjct: 384 YCDYDADKRYQMADWRIRPLPREMLKYAQSDTHYLLYIWDHLRNELISKSAERKENLMQS 443
Query: 461 ---------------------------------------------DLPLVESLFEWRDIV 520
L + +L +WRD V
Sbjct: 444 VFNSSKQISLRKYELEPYDPIYGLGTDGWRNVLTKFGSSKIIGREALMIYRALHDWRDSV 503
Query: 521 ARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRHS-MLN 528
AR EDES Y+LPN+ L+ IA PV + + K + IV +++ + L
Sbjct: 504 ARKEDESVRYVLPNRLLIAIAASKPVEAADVFSISKQLTPIARMYVEDIVKVVQEAEKLY 548
BLAST of Carg19578 vs. ExPASy TrEMBL
Match:
A0A6J1GEI0 (protein RRP6-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111453438 PE=4 SV=1)
HSP 1 Score: 1699.1 bits (4399), Expect = 0.0e+00
Identity = 885/936 (94.55%), Postives = 886/936 (94.66%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRVL 360
Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
SMPRESEESDLPLVE SL
Sbjct: 421 SMPRESEESDLPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLAVAASL 480
Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKPCPTDEIIMLEDDS 780
Query: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840
DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE
Sbjct: 781 DDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNE 840
Query: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR----DPKASKNTGAKS 890
QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKR DPKASKNTGAKS
Sbjct: 841 QAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKREDDKDPKASKNTGAKS 900
BLAST of Carg19578 vs. ExPASy TrEMBL
Match:
A0A6J1IRZ7 (protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111478169 PE=4 SV=1)
HSP 1 Score: 1648.3 bits (4267), Expect = 0.0e+00
Identity = 862/940 (91.70%), Postives = 872/940 (92.77%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR
Sbjct: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK EEE
Sbjct: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRK-EEE 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPF 180
EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDR+TLGVKPKVPF
Sbjct: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRKTLGVKPKVPF 180
Query: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV
Sbjct: 181 HIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPV 240
Query: 241 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
YPPSLDCTPFKFIEEVNDLK+LAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF
Sbjct: 241 YPPSLDCTPFKFIEEVNDLKKLAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 300
Query: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 360
VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRD+VWLQRDFGIYICNLFDTGQ ASRVL
Sbjct: 301 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDIVWLQRDFGIYICNLFDTGQ-ASRVL 360
Query: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS
Sbjct: 361 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 420
Query: 421 SMPRESEESDLPLVE-------------------------------------------SL 480
SMP ESEESD+PLVE SL
Sbjct: 421 SMPHESEESDIPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLSVAASL 480
Query: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII
Sbjct: 481 FEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTII 540
Query: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN
Sbjct: 541 RHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDN 600
Query: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKY 660
TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHS HPVLNGMGPTT ELGEHSNGDKY
Sbjct: 601 TASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSTHPVLNGMGPTTLELGEHSNGDKY 660
Query: 661 PVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSF 720
PVAQV+GVNITLQKKTNRGGLGSLLGNSAPKRKLDTD KDKEENKLDKIRSSVTLPFHSF
Sbjct: 661 PVAQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTLPFHSF 720
Query: 721 LGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEIIMLEDDS 780
LGTSE LKSVVEPTTMT LK QNSEAP AESTK+SNIELP MPVSK CPTDEIIMLEDDS
Sbjct: 721 LGTSEQLKSVVEPTTMTTLKTQNSEAPVAESTKTSNIELPAMPVSKPCPTDEIIMLEDDS 780
Query: 781 D----DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCL 840
D DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD N+DEPMSLSELSSSFQKCL
Sbjct: 781 DDDDEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDD--NNDEPMSLSELSSSFQKCL 840
Query: 841 NSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK----RDPKASKNT 890
NSNEQAMNL+ETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK +DPKASK
Sbjct: 841 NSNEQAMNLRETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKLEDDKDPKASKIA 900
BLAST of Carg19578 vs. ExPASy TrEMBL
Match:
A0A5A7TI59 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00910 PE=4 SV=1)
HSP 1 Score: 1468.0 bits (3799), Expect = 0.0e+00
Identity = 777/951 (81.70%), Postives = 823/951 (86.54%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1 MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVW +EMA+PED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEE+
Sbjct: 61 QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHD-SFESSVKVATKDRRTLGVKPKVP 180
EESGRAVALTAD DDGFQLVCGKKKK+P+H DE+HD SFESSVKVATKDR+TLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
Query: 181 FHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQP 240
FHIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG+RFVHPLEK SVLDFVDKI+EDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240
Query: 241 VYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
+YPPSLDCTPFKFIEEVNDLKELAAKLR NEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
Query: 301 FVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRV 360
+VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRV
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRV 360
Query: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKL 420
LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL
Sbjct: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL 420
Query: 421 SSMPRESEESDLPLVE-------------------------------------------S 480
SSMP E+EESD PLVE
Sbjct: 421 SSMPHEAEESDPPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAG 480
Query: 481 LFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTI 540
LFEWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IERNLASIVTI
Sbjct: 481 LFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTI 540
Query: 541 IRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVD 600
IRHSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT I +K+SAVD
Sbjct: 541 IRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------ILNMKNSAVD 600
Query: 601 NTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG------MGPTTSELGE 660
NT SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS+HPVLNG +GPTTSE +
Sbjct: 601 NTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEPSK 660
Query: 661 HSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSV 720
HSNGDKYPVA V+GVNI+LQKKTNRGGLGSLLGNSAPKRKLDTD KDKEE+KLDKIRSSV
Sbjct: 661 HSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRSSV 720
Query: 721 TLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEI 780
TLPFHSFLGTSE LKSV EPTT+TALK QNSE PAAES KS+N+E P +PV K PTDEI
Sbjct: 721 TLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTDEI 780
Query: 781 IMLEDDSD--------DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSL 840
IMLEDDSD DEDEEL V E ATDEPKLKG SASSPLEIDD DDEPMSL
Sbjct: 781 IMLEDDSDDNVEDEDGDEDEELRAVDE-ATDEPKLKGLSASSPLEIDD-----DDEPMSL 840
Query: 841 SELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK-- 890
SELSSSFQKCLNSNEQAMNL ETD+ G QS FLQIKPFDYEAARK++ FGEDLEEDS+
Sbjct: 841 SELSSSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPE 900
BLAST of Carg19578 vs. ExPASy TrEMBL
Match:
A0A1S3B475 (protein RRP6-like 2 OS=Cucumis melo OX=3656 GN=LOC103485997 PE=4 SV=1)
HSP 1 Score: 1468.0 bits (3799), Expect = 0.0e+00
Identity = 777/951 (81.70%), Postives = 823/951 (86.54%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1 MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVW +EMA+PED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEE+
Sbjct: 61 QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHD-SFESSVKVATKDRRTLGVKPKVP 180
EESGRAVALTAD DDGFQLVCGKKKK+P+H DE+HD SFESSVKVATKDR+TLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
Query: 181 FHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQP 240
FHIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG+RFVHPLEK SVLDFVDKI+EDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240
Query: 241 VYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
+YPPSLDCTPFKFIEEVNDLKELAAKLR NEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
Query: 301 FVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRV 360
+VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRV
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRV 360
Query: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKL 420
LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL
Sbjct: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL 420
Query: 421 SSMPRESEESDLPLVE-------------------------------------------S 480
SSMP E+EESD PLVE
Sbjct: 421 SSMPHEAEESDPPLVEVYKRSHDVCMHLYEKELLTESSYLYVYGLQGSGFDAQQLAVAAG 480
Query: 481 LFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTI 540
LFEWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IERNLASIVTI
Sbjct: 481 LFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERNLASIVTI 540
Query: 541 IRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVD 600
IRHSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT I +K+SAVD
Sbjct: 541 IRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------ILNMKNSAVD 600
Query: 601 NTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG------MGPTTSELGE 660
NT SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS+HPVLNG +GPTTSE +
Sbjct: 601 NTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQVGPTTSEPSK 660
Query: 661 HSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSV 720
HSNGDKYPVA V+GVNI+LQKKTNRGGLGSLLGNSAPKRKLDTD KDKEE+KLDKIRSSV
Sbjct: 661 HSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEESKLDKIRSSV 720
Query: 721 TLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTDEI 780
TLPFHSFLGTSE LKSV EPTT+TALK QNSE PAAES KS+N+E P +PV K PTDEI
Sbjct: 721 TLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPVPKPFPTDEI 780
Query: 781 IMLEDDSD--------DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSL 840
IMLEDDSD DEDEEL V E ATDEPKLKG SASSPLEIDD DDEPMSL
Sbjct: 781 IMLEDDSDDNVEDEDGDEDEELRAVDE-ATDEPKLKGLSASSPLEIDD-----DDEPMSL 840
Query: 841 SELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSK-- 890
SELSSSFQKCLNSNEQAMNL ETD+ G QS FLQIKPFDYEAARK++ FGEDLEEDS+
Sbjct: 841 SELSSSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGEDLEEDSEPE 900
BLAST of Carg19578 vs. ExPASy TrEMBL
Match:
A0A5D3DTL6 (Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00180 PE=4 SV=1)
HSP 1 Score: 1464.5 bits (3790), Expect = 0.0e+00
Identity = 777/960 (80.94%), Postives = 823/960 (85.73%), Query Frame = 0
Query: 1 MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR 60
MDVDQSDSQKAQTLQSLT+GSLGSSLSKLA SS+ IPA KDFHFYYNFDEFKIPIR+I+R
Sbjct: 1 MDVDQSDSQKAQTLQSLTTGSLGSSLSKLAASSRAIPAEKDFHFYYNFDEFKIPIRTIER 60
Query: 61 QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE 120
QSQSMLETIGSSAEVW +EMA+PED DDAYDWLVNVNDEI ERFDVSLDEFQ+IRKEEE+
Sbjct: 61 QSQSMLETIGSSAEVWDREMAYPEDTDDAYDWLVNVNDEIFERFDVSLDEFQKIRKEEEQ 120
Query: 121 EESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHD-SFESSVKVATKDRRTLGVKPKVP 180
EESGRAVALTAD DDGFQLVCGKKKK+P+H DE+HD SFESSVKVATKDR+TLGVKPKVP
Sbjct: 121 EESGRAVALTADPDDGFQLVCGKKKKTPTHEDEMHDSSFESSVKVATKDRKTLGVKPKVP 180
Query: 181 FHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQP 240
FHIPTIRRPQDEFNILVNN+NQPFEHVWLQRSEDG+RFVHPLEK SVLDFVDKI+EDFQP
Sbjct: 181 FHIPTIRRPQDEFNILVNNSNQPFEHVWLQRSEDGTRFVHPLEKFSVLDFVDKISEDFQP 240
Query: 241 VYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
+YPPSLDCTPFKFIEEVNDLKELAAKLR NEFAVDLEHNQYRSFQGLTCLMQISTRTED
Sbjct: 241 IYPPSLDCTPFKFIEEVNDLKELAAKLRGVNEFAVDLEHNQYRSFQGLTCLMQISTRTED 300
Query: 301 FVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRV 360
+VVDTLKLRIHVGPYLREVFKDPSK+KVLHGADRDVVWLQRDFGIYICNLFDTGQ ASRV
Sbjct: 301 YVVDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDVVWLQRDFGIYICNLFDTGQ-ASRV 360
Query: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKL 420
LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEM+RYAREDTHYLLYIYDLMR KL
Sbjct: 361 LKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMVRYAREDTHYLLYIYDLMRMKL 420
Query: 421 SSMPRESEESDLPLVE-------------------------------------------- 480
SSMP E+EESD PLVE
Sbjct: 421 SSMPHEAEESDPPLVEEITFNFVTSSSFXLYEKELLTESSYLYVYGLVFSILGLQGSGFD 480
Query: 481 --------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIE 540
LFEWRD+VARAEDESTGYILPNKTLLEIAKQMPVT+NKLRRLLKSKH +IE
Sbjct: 481 AQQLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIE 540
Query: 541 RNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAI 600
RNLASIVTIIRHSMLNS AFEEAA+RLKEVR EAASEEN SANEHQETN+PDT I
Sbjct: 541 RNLASIVTIIRHSMLNSCAFEEAAQRLKEVRAEAASEENASANEHQETNIPDT------I 600
Query: 601 PIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNG------M 660
+K+SAVDNT SD++CS SSQSKVAPLE GYRPFVPGKCV VDHS+HPVLNG +
Sbjct: 601 LNMKNSAVDNTPSDRVCSPSSQSKVAPLECGYRPFVPGKCVKVDHSLHPVLNGSRHISQV 660
Query: 661 GPTTSELGEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEEN 720
GPTTSE +HSNGDKYPVA V+GVNI+LQKKTNRGGLGSLLGNSAPKRKLDTD KDKEE+
Sbjct: 661 GPTTSEPSKHSNGDKYPVAHVTGVNISLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEES 720
Query: 721 KLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPV 780
KLDKIRSSVTLPFHSFLGTSE LKSV EPTT+TALK QNSE PAAES KS+N+E P +PV
Sbjct: 721 KLDKIRSSVTLPFHSFLGTSEQLKSVAEPTTVTALKTQNSELPAAESAKSTNVEPPAVPV 780
Query: 781 SKSCPTDEIIMLEDDSD--------DEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDD 840
K PTDEIIMLEDDSD DEDEEL V E ATDEPKLKG SASSPLEIDD
Sbjct: 781 PKPFPTDEIIMLEDDSDDNVEDEDGDEDEELRAVDE-ATDEPKLKGLSASSPLEIDD--- 840
Query: 841 NNDDEPMSLSELSSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGE 890
DDEPMSLSELSSSFQKCLNSNEQAMNL ETD+ G QS FLQIKPFDYEAARK++ FGE
Sbjct: 841 --DDEPMSLSELSSSFQKCLNSNEQAMNLGETDNPGNQSDFLQIKPFDYEAARKEVVFGE 900
BLAST of Carg19578 vs. TAIR 10
Match:
AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 764.2 bits (1972), Expect = 1.1e-220
Identity = 465/945 (49.21%), Postives = 584/945 (61.80%), Query Frame = 0
Query: 1 MDVDQSD-SQKAQTLQSLTSG-SLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSI 60
MDVD+S S K ++L+ L G S S+LS+L+ SS+ IP +DFHFYYNFDEFK PI I
Sbjct: 6 MDVDESPVSWKVKSLEKLIDGSSFSSTLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEI 65
Query: 61 DRQSQSMLETIGSSAEVWGKEMAFPEDNDDAY--DWLVNVNDEILERFDVSLDEFQRIRK 120
SQS L TIG S +VWGK M FP D DD Y DWL NVNDE++ERFDVS+DEFQRIRK
Sbjct: 66 TGTSQSTLATIGDSEQVWGKSMKFPGDVDDVYAEDWLCNVNDELIERFDVSVDEFQRIRK 125
Query: 121 EEEEEESGRAVALTADADDGFQLVCGKKKKSPSH---GDEVHDSFES--SVKVATKDRRT 180
+E+E GR+V + D DDGFQ+V GKKKK + G + S VK+A +D+ +
Sbjct: 126 --KEKEIGRSV-VADDGDDGFQMVYGKKKKPVGNVVTGSAAVNGGGSVIDVKMAERDKNS 185
Query: 181 LGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVD 240
G K KVPFH+PTI++PQ+E+NILVNNAN PFEHVWL+RSED R +HPLEK SVLDFVD
Sbjct: 186 SG-KAKVPFHVPTIKKPQEEYNILVNNANLPFEHVWLERSEDDLRAMHPLEKFSVLDFVD 245
Query: 241 KINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLM 300
K + +PV P L+ TPFKF++EV DLKEL AKLR EFAVDLEHNQYRSFQGLTCLM
Sbjct: 246 KDVNEMEPVKPLPLEQTPFKFVQEVKDLKELVAKLRSVEEFAVDLEHNQYRSFQGLTCLM 305
Query: 301 QISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFD 360
QISTRTED++VDT KLRIH+GPYLRE+FKDP K+KV+HGADRD++WLQRDFGIY+CNLFD
Sbjct: 306 QISTRTEDYIVDTFKLRIHIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIYVCNLFD 365
Query: 361 TGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYI 420
TGQ ASRVL LERNSLE+LL HFCGV ANKEYQNADWR+RPLPEEM RYAREDTHYLLYI
Sbjct: 366 TGQ-ASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAREDTHYLLYI 425
Query: 421 YDLMRKKLSSMPRESEESDLPLVE------------------------------------ 480
YDL++ +L M ++ +D PL+E
Sbjct: 426 YDLIKLELQRMAKDDAHTDSPLLEVYKRSYDVCTQLYEKELLTENSYLHVYGLQAAGFNA 485
Query: 481 -------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIER 540
L EWRD +ARAEDESTGY+LPNK LLEIAK+MP ++ KLRR+LKSKH +IER
Sbjct: 486 AQLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIER 545
Query: 541 NLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIP 600
N+ S+V++IR SM + +AFE AA LK+V ++N I
Sbjct: 546 NVDSVVSVIRQSMQHYAAFESAALSLKDVSPGNVMDKNIE-----------------PIS 605
Query: 601 IVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSEL 660
KD + AS + +SSQ + S ++ MG +
Sbjct: 606 EKKDLHTGDVASPSLKENSSQLE---------------------STRDLI--MGAANTNE 665
Query: 661 GEHSNGDKYPVAQVSGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRS 720
G + A+VS + + KK + GLG+LLGN+A K+K TD K KE+ KL++IRS
Sbjct: 666 GRGLGSGLFGSAKVSAA-VRISKKPS-SGLGALLGNAASKKKSRTDEKVKEDVKLEQIRS 725
Query: 721 SVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKSCPTD 780
SV L FHSF KS E + K + + MP S S D
Sbjct: 726 SVNLSFHSFTEKVPDSKSTSETSPKVYGKPEEMSS--------------TMPASVS-KED 785
Query: 781 EIIMLEDDSDDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNN---DDEPMSLSEL 840
+ L+DDS++ E + E K+ + +++ D+ +DEPMSLSEL
Sbjct: 786 GVKELKDDSEEASEIVG--TSGRVSESKVSSSEMGDIILLENGDEKKVDAEDEPMSLSEL 845
Query: 841 SSSFQKCLNSNEQAMNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLE-EDSKRDPK 890
S++FQKC S ++ Q KQ+ FL I+PFDYEAARK+++FGE + KR+
Sbjct: 846 STNFQKCFKSMNKSKKAQ------KQTEFLNIEPFDYEAARKEVKFGEGHKGRQGKREAA 869
BLAST of Carg19578 vs. TAIR 10
Match:
AT1G54440.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 498.0 bits (1281), Expect = 1.5e-140
Identity = 303/685 (44.23%), Postives = 398/685 (58.10%), Query Frame = 0
Query: 103 RFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSV 162
RFD +DEF+R RK EE+ + V + A++D GF
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVIDVKV-AESDKGFAKF---------------------- 61
Query: 163 KVATKDRRTLGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLE 222
K +VPFHIPT+ +PQ+E+ ILV+NAN PFEHV L++SEDG RF+HPLE
Sbjct: 62 -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121
Query: 223 KLSVLDFVDKINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYR 282
+LSV+DFVD+ + +PV P L+ TPFK +EEV DL++LAA L+ EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181
Query: 283 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDF 342
+FQGLTCLMQISTRTED++VD KL H+GPYLRE+FKDP K+KV+HGADRD++WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241
Query: 343 GIYICNLFDTGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAR 402
GIY+CNLFDTGQ ASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 GIYVCNLFDTGQ-ASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301
Query: 403 EDTHYLLYIYDLMRKKLSSMPRESEESDLPLVE--------------------------- 462
EDTHYLLYIYD+MR +L +M +E E+SD PLVE
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361
Query: 463 ----------------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLL 522
L EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ + +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421
Query: 523 KSKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPD 582
KSK ++ERN +++++IR SM N++AFE + LK+ R E E N +
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481
Query: 583 TSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLN 642
S+L +++ D SS V PL+ R K V V+ ++ P +
Sbjct: 482 ASSL----------SLEKVCVDDSKKQSSGFGVLPLK---RKLESDKTV-VEKNIEPKIE 541
Query: 643 GMGPTTSELGEHSNGDKYPVAQVSGVNITL-QKKTNRGGLGSLLGNSAPKRKLDTDTKDK 702
G S + +S + + K G G LL KRK ++D K K
Sbjct: 542 KTGTEAS------------ASSLSSKKVCVDDSKKQSSGFGVLLS----KRKFESDNKVK 601
Query: 703 EENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPV 744
EE K+ K + + + +S + T KA ++ +E+ + L
Sbjct: 602 EEVKVSKSKPDKVIIVVDDDDDDDDDESYEQST-----KAADALDRVSETPSKGSPSLTQ 613
BLAST of Carg19578 vs. TAIR 10
Match:
AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 493.0 bits (1268), Expect = 4.9e-139
Identity = 303/687 (44.10%), Postives = 398/687 (57.93%), Query Frame = 0
Query: 103 RFDVSLDEFQRIRKEEEEEESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSV 162
RFD +DEF+R RK EE+ + V + A++D GF
Sbjct: 2 RFDDPMDEFKRNRKMEEDSKKVIDVKV-AESDKGFAKF---------------------- 61
Query: 163 KVATKDRRTLGVKPKVPFHIPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLE 222
K +VPFHIPT+ +PQ+E+ ILV+NAN PFEHV L++SEDG RF+HPLE
Sbjct: 62 -----------GKAEVPFHIPTLTKPQEEYKILVDNANNPFEHVLLEKSEDGLRFIHPLE 121
Query: 223 KLSVLDFVDKINEDFQPVYPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYR 282
+LSV+DFVD+ + +PV P L+ TPFK +EEV DL++LAA L+ EFAVDLEHNQYR
Sbjct: 122 ELSVMDFVDRNLSEMRPVKPLPLEETPFKLVEEVKDLEDLAAALQSVEEFAVDLEHNQYR 181
Query: 283 SFQGLTCLMQISTRTEDFVVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDF 342
+FQGLTCLMQISTRTED++VD KL H+GPYLRE+FKDP K+KV+HGADRD++WLQRDF
Sbjct: 182 TFQGLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDF 241
Query: 343 GIYICNLFDTGQVASRVLKLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAR 402
GIY+CNLFDTGQ ASRVLKLERNSLE+LL H+CGVAANKEYQ ADWR+RPLP+ M RYAR
Sbjct: 242 GIYVCNLFDTGQ-ASRVLKLERNSLEFLLKHYCGVAANKEYQKADWRIRPLPDVMKRYAR 301
Query: 403 EDTHYLLYIYDLMRKKLSSMPRESEESDLPLVE--------------------------- 462
EDTHYLLYIYD+MR +L +M +E E+SD PLVE
Sbjct: 302 EDTHYLLYIYDVMRMELHTMAKEDEQSDSPLVEVYKRSYDVCMQLYEKELWTRDSYLHVY 361
Query: 463 ----------------SLFEWRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLL 522
L EWRD +ARA+DESTGY+LPNKTL +IAK+MP+ + +LRRLL
Sbjct: 362 GVQTGNLNAVQLSIVAGLCEWRDRIARADDESTGYVLPNKTLFDIAKEMPIVVAQLRRLL 421
Query: 523 KSKHSFIERNLASIVTIIRHSMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPD 582
KSK ++ERN +++++IR SM N++AFE + LK+ R E E N +
Sbjct: 422 KSKLPYLERNFDAVISVIRRSMQNAAAFEPVVQSLKDRRPETVVEMNIEPKIEKTDTGAS 481
Query: 583 TSNLRYAIPIVKDSAVDNTASDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLN 642
S+L +++ D SS V PL+ R K V V+ ++ P +
Sbjct: 482 ASSL----------SLEKVCVDDSKKQSSGFGVLPLK---RKLESDKTV-VEKNIEPKIE 541
Query: 643 GMGPTTSELGEHSNGDKYPVAQVSGVNITL-QKKTNRGGLGSLLGNSAPKRKLDTDTK-- 702
G S + +S + + K G G LL KRK ++D K
Sbjct: 542 KTGTEAS------------ASSLSSKKVCVDDSKKQSSGFGVLLS----KRKFESDNKLQ 601
Query: 703 DKEENKLDKIRSSVTLPFHSFLGTSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIEL 744
KEE K+ K + + + +S + T KA ++ +E+ + L
Sbjct: 602 VKEEVKVSKSKPDKVIIVVDDDDDDDDDESYEQST-----KAADALDRVSETPSKGSPSL 615
BLAST of Carg19578 vs. TAIR 10
Match:
AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 195.3 bits (495), Expect = 2.1e-49
Identity = 129/350 (36.86%), Postives = 172/350 (49.14%), Query Frame = 0
Query: 187 RPQDEF-NILVNNANQPFEHVWLQRSEDGS----RFVHPLE-KLSVLDFVDKINEDFQPV 246
+PQ F +L +N+ F+H+ L + S HP E +++VL +I F
Sbjct: 50 KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRG 109
Query: 247 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 306
+ ++E + LKELA L +E FAVD E + RSF G T L+QIST EDF
Sbjct: 110 ECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDF 169
Query: 307 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 366
+VDT+ L V LR VF DP+ KV HGAD DV+WLQRDF IY+ N+FDT + A VL
Sbjct: 170 LVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAK-ACEVL 229
Query: 367 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 426
+ SL YLL CGVA NK Q DWR RPL EEM+RYAR D HYLLYI D + +L
Sbjct: 230 SKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELK 289
Query: 427 SMPRES---------------------------EESDLP--------------------- 476
+ +S E D P
Sbjct: 290 QLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSN 349
BLAST of Carg19578 vs. TAIR 10
Match:
AT2G32415.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain )
HSP 1 Score: 195.3 bits (495), Expect = 2.1e-49
Identity = 129/350 (36.86%), Postives = 172/350 (49.14%), Query Frame = 0
Query: 187 RPQDEF-NILVNNANQPFEHVWLQRSEDGS----RFVHPLE-KLSVLDFVDKINEDFQPV 246
+PQ F +L +N+ F+H+ L + S HP E +++VL +I F
Sbjct: 50 KPQFGFKRVLADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFGFLRG 109
Query: 247 YPPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDF 306
+ ++E + LKELA L +E FAVD E + RSF G T L+QIST EDF
Sbjct: 110 ECSLEMSDSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDF 169
Query: 307 VVDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQVASRVL 366
+VDT+ L V LR VF DP+ KV HGAD DV+WLQRDF IY+ N+FDT + A VL
Sbjct: 170 LVDTIALH-DVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAK-ACEVL 229
Query: 367 KLERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLS 426
+ SL YLL CGVA NK Q DWR RPL EEM+RYAR D HYLLYI D + +L
Sbjct: 230 SKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELK 289
Query: 427 SMPRES---------------------------EESDLP--------------------- 476
+ +S E D P
Sbjct: 290 QLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSN 349
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A9LLI7 | 1.6e-219 | 49.21 | Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1 | [more] |
Q0WVE8 | 2.1e-139 | 44.23 | Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1 | [more] |
Q01780 | 1.4e-69 | 36.87 | Exosome component 10 OS=Homo sapiens OX=9606 GN=EXOSC10 PE=1 SV=2 | [more] |
P56960 | 9.8e-68 | 37.07 | Exosome component 10 OS=Mus musculus OX=10090 GN=Exosc10 PE=1 SV=2 | [more] |
Q10146 | 5.4e-58 | 30.58 | Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GEI0 | 0.0e+00 | 94.55 | protein RRP6-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111453438 PE=4 SV=1 | [more] |
A0A6J1IRZ7 | 0.0e+00 | 91.70 | protein RRP6-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111478169 PE=4 SV=1 | [more] |
A0A5A7TI59 | 0.0e+00 | 81.70 | Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G0... | [more] |
A0A1S3B475 | 0.0e+00 | 81.70 | protein RRP6-like 2 OS=Cucumis melo OX=3656 GN=LOC103485997 PE=4 SV=1 | [more] |
A0A5D3DTL6 | 0.0e+00 | 80.94 | Protein RRP6-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G0... | [more] |
Match Name | E-value | Identity | Description | |
AT5G35910.1 | 1.1e-220 | 49.21 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT1G54440.1 | 1.5e-140 | 44.23 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT1G54440.2 | 4.9e-139 | 44.10 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT2G32415.1 | 2.1e-49 | 36.86 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |
AT2G32415.2 | 2.1e-49 | 36.86 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain | [more] |