Carg19450 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19450
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein IQ-DOMAIN 31-like
Location	Carg_Chr16: 10070884 .. 10071470 (-)
RNA-Seq Expression	Carg19450
Synteny	Carg19450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTACAAGAAACTGGTTCAGAAGAGCTCGAAGGAAGCTGAGTAGAAAAGCCAACAGAGACATTGTTTTTCTGCAGACAAACGCCAGCCCAAATCATGATGAAGAAGAAACCAATCTTACATTAGCACAACAACAAGAAGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGAAGATGATGAAGAATTTACATATGATTCAAGGATACCCAGTTTTCAAAACAAAGATTTGTCTATAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGTATTATATCTTACCATGACATATTTGTTCATTGAATTCTTGATGAATTTGTCTATGCTAAAGTAGGCTACATTTAGTCCTTTGGTGTATTATCAACACCTACGCTTGTTGTTCAGGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGTGCGAGGAGGCAGGCACGAGTAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACAGATACAGTGAAGAGTCTGATTATTGA

mRNA sequence

ATGGGGATTACAAGAAACTGGTTCAGAAGAGCTCGAAGGAAGCTGAGTAGAAAAGCCAACAGAGACATTGTTTTTCTGCAGACAAACGCCAGCCCAAATCATGATGAAGAAGAAACCAATCTTACATTAGCACAACAACAAGAAGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGAAGATGATGAAGAATTTACATATGATTCAAGGATACCCAGTTTTCAAAACAAAGATTTGTCTATAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGTGCGAGGAGGCAGGCACGAGTAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACAGATACAGTGAAGAGTCTGATTATTGA

Coding sequence (CDS)

ATGGGGATTACAAGAAACTGGTTCAGAAGAGCTCGAAGGAAGCTGAGTAGAAAAGCCAACAGAGACATTGTTTTTCTGCAGACAAACGCCAGCCCAAATCATGATGAAGAAGAAACCAATCTTACATTAGCACAACAACAAGAAGATGAAGAACATGAAGAAGAAGAAGAAGAAGAAGAAGATGATGAAGAATTTACATATGATTCAAGGATACCCAGTTTTCAAAACAAAGATTTGTCTATAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGTGCGAGGAGGCAGGCACGAGTAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACAGATACAGTGAAGAGTCTGATTATTGA

Protein sequence

MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEEEDDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY

Homology

[Close]

BLAST of Carg19450 vs. NCBI nr
Match: KAG6577802.1 (Protein IQ-DOMAIN 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015841.1 Protein IQ-DOMAIN 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEEE 60
           MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEEE
Sbjct: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEEE 60

Query: 61  DDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCA 120
           DDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCA
Sbjct: 61  DDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCA 120

Query: 121 RRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY 157
           RRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY
Sbjct: 121 RRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY 156

[Close]

BLAST of Carg19450 vs. NCBI nr
Match: XP_022923472.1 (protein IQ-DOMAIN 31-like [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 3.9e-70
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEH---EEEEE 60
           MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEH   EEEEE
Sbjct: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEDEEEEEE 60

Query: 61  EEEDDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120
           EEE+DEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG
Sbjct: 61  EEEEDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120

Query: 121 VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY 157
           VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY
Sbjct: 121 VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY 159

[Close]

BLAST of Carg19450 vs. NCBI nr
Match: XP_038904192.1 (protein IQ-DOMAIN 31 [Benincasa hispida])

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 133/156 (85.26%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   MGITRNWFRRARRKLSRKA-NRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEE 60
           MGI RNWFRRARRKLSR   NRDIVFLQTNASP HDEE+T LTL QQQ++EE EEEEEEE
Sbjct: 1   MGIARNWFRRARRKLSRNGNNRDIVFLQTNASPIHDEEQTKLTLPQQQDEEEEEEEEEEE 60

Query: 61  EDDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVC 120
            D     YDS  P FQNK LS+EEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVC
Sbjct: 61  ID-----YDSMTPRFQNKVLSVEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVC 120

Query: 121 ARRQARVALQFMHALVRLQVRVRARQLLNRYSEESD 156
           ARRQAR+ALQFMHALVRLQVRVRARQLLNRYSEESD
Sbjct: 121 ARRQARIALQFMHALVRLQVRVRARQLLNRYSEESD 151

[Close]

BLAST of Carg19450 vs. NCBI nr
Match: XP_004146164.2 (protein IQ-DOMAIN 1 [Cucumis sativus] >KGN55627.1 hypothetical protein Csa_009661 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 4.0e-54
Identity = 132/158 (83.54%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MGITRNWFRRARRKL-SRKANRDIVFLQTNASPNHDEEETNLTLAQQQ--EDEEHEEEEE 60
           MGITRNWFRRARRKL SR  N   VFLQTNASP HDEE+TNLTL QQQ  E+EE EEE+E
Sbjct: 1   MGITRNWFRRARRKLISRNGNSRDVFLQTNASPIHDEEQTNLTLTQQQDGEEEEDEEEDE 60

Query: 61  EEEDDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120
           EEE++EE  Y+S  P FQNK LS EE AAIKIQACFRGHLARRAFQALRSLVKLQALARG
Sbjct: 61  EEEEEEEIDYESMTPRFQNKVLSKEEEAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120

Query: 121 VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESD 156
           VCARRQAR+ALQFMHALVRLQVRVRARQLLNRYSEESD
Sbjct: 121 VCARRQARIALQFMHALVRLQVRVRARQLLNRYSEESD 158

[Close]

BLAST of Carg19450 vs. NCBI nr
Match: KAG7027812.1 (Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.4 bits (485), Expect = 5.7e-45
Identity = 110/155 (70.97%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEEE 60
           MGITRNWFRR RR+LSRK NRDIVFLQTNA                      EEEEEEEE
Sbjct: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTNA---------------------EEEEEEEEE 60

Query: 61  DDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCA 120
           ++EE  YDS +PSFQ K + +EEVAAIKIQ CFRGHLARRAF+ALRSLVKLQALARGVCA
Sbjct: 61  EEEEIAYDSIVPSFQKKAVCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCA 120

Query: 121 RRQARVALQFMHALVRLQVRVRARQLLNRYSEESD 156
           RRQAR+ALQFM+ L RLQVRVR RQL++RYSEESD
Sbjct: 121 RRQARIALQFMYTLARLQVRVRTRQLVSRYSEESD 134

[Close]

BLAST of Carg19450 vs. ExPASy Swiss-Prot
Match: Q9SD11 (Protein IQ-DOMAIN 20 OS=Arabidopsis thaliana OX=3702 GN=IQD20 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 82  EEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVRV 141
           EE+AA+KIQA FRGHLARRAF+AL+SLVKLQA+ARGV  RRQAR+AL  MHAL RLQVRV
Sbjct: 36  EEIAAVKIQAFFRGHLARRAFKALKSLVKLQAVARGVLVRRQARIALHCMHALARLQVRV 95

Query: 142 RARQLLN 149
           RARQLL+
Sbjct: 96  RARQLLS 102

[Close]

BLAST of Carg19450 vs. ExPASy Swiss-Prot
Match: Q9FT53 (Protein IQ-DOMAIN 3 OS=Arabidopsis thaliana OX=3702 GN=IQD3 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-12
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 80  SIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQV 139
           S+EE+AAIKIQ  FRG++ARRA +ALR LV+L++L +G C RRQA   LQ M  L R+Q 
Sbjct: 105 SMEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQY 164

Query: 140 RVRARQLLNRYSEE 154
           ++R R+L  R SE+
Sbjct: 165 QIRERRL--RLSED 176

[Close]

BLAST of Carg19450 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 81  IEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVR 140
           IEE AAIKIQAC+R HLAR+A +AL+ LVKLQAL RG   R+QA   L+ M AL+ LQ +
Sbjct: 162 IEEFAAIKIQACYRSHLARKALRALKGLVKLQALVRGHLVRKQATATLRCMQALITLQAK 221

Query: 141 VRARQL 147
            R +++
Sbjct: 222 AREQRI 227

[Close]

BLAST of Carg19450 vs. ExPASy Swiss-Prot
Match: O64852 (Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-11
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 82  EEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVRV 141
           EE AAI+IQ  FRG LARRA +AL+ +V+LQAL RG   R+QA V L+ M ALVR+Q RV
Sbjct: 83  EEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARV 142

Query: 142 RARQL 147
           RAR++
Sbjct: 143 RARRV 147

[Close]

BLAST of Carg19450 vs. ExPASy Swiss-Prot
Match: F4J061 (Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 80  SIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQV 139
           S E  AA +IQ  +RG LARRA +AL+ LV+LQAL RG   R+QA V L+ M ALVR+Q 
Sbjct: 85  SRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQA 144

Query: 140 RVRARQLLNRYSEESD 156
           RVRAR++      ES+
Sbjct: 145 RVRARRVRLALELESE 160

[Close]

BLAST of Carg19450 vs. ExPASy TrEMBL
Match: A0A6J1E674 (protein IQ-DOMAIN 31-like OS=Cucurbita moschata OX=3662 GN=LOC111431153 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEH---EEEEE 60
           MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEH   EEEEE
Sbjct: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEDEEEEEE 60

Query: 61  EEEDDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120
           EEE+DEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG
Sbjct: 61  EEEEDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120

Query: 121 VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY 157
           VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY
Sbjct: 121 VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY 159

[Close]

BLAST of Carg19450 vs. ExPASy TrEMBL
Match: A0A0A0L4V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002470 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 132/158 (83.54%), Postives = 139/158 (87.97%), Query Frame = 0


Query: 1   MGITRNWFRRARRKL-SRKANRDIVFLQTNASPNHDEEETNLTLAQQQ--EDEEHEEEEE 60
           MGITRNWFRRARRKL SR  N   VFLQTNASP HDEE+TNLTL QQQ  E+EE EEE+E
Sbjct: 1   MGITRNWFRRARRKLISRNGNSRDVFLQTNASPIHDEEQTNLTLTQQQDGEEEEDEEEDE 60

Query: 61  EEEDDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120
           EEE++EE  Y+S  P FQNK LS EE AAIKIQACFRGHLARRAFQALRSLVKLQALARG
Sbjct: 61  EEEEEEEIDYESMTPRFQNKVLSKEEEAAIKIQACFRGHLARRAFQALRSLVKLQALARG 120

Query: 121 VCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESD 156
           VCARRQAR+ALQFMHALVRLQVRVRARQLLNRYSEESD
Sbjct: 121 VCARRQARIALQFMHALVRLQVRVRARQLLNRYSEESD 158

[Close]

BLAST of Carg19450 vs. ExPASy TrEMBL
Match: A0A6J1H822 (protein IQ-DOMAIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111460382 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-43
Identity = 106/155 (68.39%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEEE 60
           MGITRNWFRR RR+LSRK NRDIVFLQTNA                         EEEE+
Sbjct: 1   MGITRNWFRRVRRRLSRKGNRDIVFLQTNA-------------------------EEEEQ 60

Query: 61  DDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCA 120
           + EE  YDS +PSFQ K + +EEVAAIKIQ CFRGHLARRAF+ALRSLVKLQALARGVCA
Sbjct: 61  EQEEIAYDSIVPSFQKKAVCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVCA 120

Query: 121 RRQARVALQFMHALVRLQVRVRARQLLNRYSEESD 156
           RRQAR+ALQFMH L RLQV+VR RQL++RYSEESD
Sbjct: 121 RRQARIALQFMHTLARLQVQVRTRQLVSRYSEESD 130

[Close]

BLAST of Carg19450 vs. ExPASy TrEMBL
Match: A0A6J1I877 (protein IQ-DOMAIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111470076 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 3.2e-41
Identity = 106/156 (67.95%), Postives = 112/156 (71.79%), Query Frame = 0


Query: 1   MGITRN-WFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEE 60
           MGITRN WFRR RR LSRK NRDIVFLQTNA                           EE
Sbjct: 1   MGITRNWWFRRVRRTLSRKGNRDIVFLQTNA---------------------------EE 60

Query: 61  EDDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVC 120
           E  +E  YDS IPSFQ K L +EEVAAIKIQ CFRGHLARRAF+ALRSLVKLQALARGVC
Sbjct: 61  EQQQEIAYDSIIPSFQKKALCLEEVAAIKIQTCFRGHLARRAFRALRSLVKLQALARGVC 120

Query: 121 ARRQARVALQFMHALVRLQVRVRARQLLNRYSEESD 156
            RRQAR+ALQFMH L RLQVRVR RQL++RYSEESD
Sbjct: 121 VRRQARIALQFMHTLARLQVRVRTRQLVSRYSEESD 129

[Close]

BLAST of Carg19450 vs. ExPASy TrEMBL
Match: A0A1R3GCE4 (IQ motif, EF-hand binding site OS=Corchorus capsularis OX=210143 GN=CCACVL1_27041 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 9.3e-25
Identity = 79/152 (51.97%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 1   MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEEEEEEEE 60
           MG  RNWF   R+KL  K+ RDI  L    SP+H+ + + +                   
Sbjct: 1   MGTARNWFNTVRKKLINKSQRDITILH---SPSHNSDISFI------------------R 60

Query: 61  DDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCA 120
           D +     SR  SFQ + L+ +++AAIKIQA FRGHLARRA++ALRSLVKLQA+ARGV  
Sbjct: 61  DFDSAATSSRSVSFQTRHLTRQDIAAIKIQAVFRGHLARRAYRALRSLVKLQAVARGVYI 120

Query: 121 RRQARVALQFMHALVRLQVRVRARQLLNRYSE 153
           R+QA++ALQ MHALVRLQVRVRARQLL  YS+
Sbjct: 121 RKQAQIALQCMHALVRLQVRVRARQLLTTYSQ 131

[Close]

BLAST of Carg19450 vs. TAIR 10
Match: AT3G51380.1 (IQ-domain 20 )

HSP 1 Score: 99.0 bits (245), Expect = 3.6e-21
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 82  EEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVRV 141
           EE+AA+KIQA FRGHLARRAF+AL+SLVKLQA+ARGV  RRQAR+AL  MHAL RLQVRV
Sbjct: 36  EEIAAVKIQAFFRGHLARRAFKALKSLVKLQAVARGVLVRRQARIALHCMHALARLQVRV 95

Query: 142 RARQLLN 149
           RARQLL+
Sbjct: 96  RARQLLS 102

[Close]

BLAST of Carg19450 vs. TAIR 10
Match: AT3G52290.1 (IQ-domain 3 )

HSP 1 Score: 72.4 bits (176), Expect = 3.6e-13
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 80  SIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQV 139
           S+EE+AAIKIQ  FRG++ARRA +ALR LV+L++L +G C RRQA   LQ M  L R+Q 
Sbjct: 105 SMEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARVQY 164

Query: 140 RVRARQLLNRYSEE 154
           ++R R+L  R SE+
Sbjct: 165 QIRERRL--RLSED 176

[Close]

BLAST of Carg19450 vs. TAIR 10
Match: AT4G14750.1 (IQ-domain 19 )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 81  IEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVR 140
           IEE AAIKIQAC+R HLAR+A +AL+ LVKLQAL RG   R+QA   L+ M AL+ LQ +
Sbjct: 103 IEEFAAIKIQACYRSHLARKALRALKGLVKLQALVRGHLVRKQATATLRCMQALITLQAK 162

Query: 141 VRARQL 147
            R +++
Sbjct: 163 AREQRI 168

[Close]

BLAST of Carg19450 vs. TAIR 10
Match: AT2G26180.1 (IQ-domain 6 )

HSP 1 Score: 68.9 bits (167), Expect = 4.0e-12
Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 82  EEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVRV 141
           EE AAI+IQ  FRG LARRA +AL+ +V+LQAL RG   R+QA V L+ M ALVR+Q RV
Sbjct: 83  EEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARV 142

Query: 142 RARQL 147
           RAR++
Sbjct: 143 RARRV 147

[Close]

BLAST of Carg19450 vs. TAIR 10
Match: AT3G22190.1 (IQ-domain 5 )

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 80  SIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQV 139
           S E  AA +IQ  +RG LARRA +AL+ LV+LQAL RG   R+QA V L+ M ALVR+Q 
Sbjct: 85  SRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVRVQA 144

Query: 140 RVRARQLLNRYSEESD 156
           RVRAR++      ES+
Sbjct: 145 RVRARRVRLALELESE 160

The following BLAST results are available for this feature:

BLAST of Carg19450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577802.1	3.2e-72	100.00	Protein IQ-DOMAIN 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG701584...	[more]
XP_022923472.1	3.9e-70	97.48	protein IQ-DOMAIN 31-like [Cucurbita moschata]	[more]
XP_038904192.1	1.2e-55	85.26	protein IQ-DOMAIN 31 [Benincasa hispida]	[more]
XP_004146164.2	4.0e-54	83.54	protein IQ-DOMAIN 1 [Cucumis sativus] >KGN55627.1 hypothetical protein Csa_00966...	[more]
KAG7027812.1	5.7e-45	70.97	Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Carg19450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD11	5.1e-20	80.60	Protein IQ-DOMAIN 20 OS=Arabidopsis thaliana OX=3702 GN=IQD20 PE=1 SV=1	[more]
Q9FT53	5.1e-12	55.41	Protein IQ-DOMAIN 3 OS=Arabidopsis thaliana OX=3702 GN=IQD3 PE=1 SV=1	[more]
A0A1P8B590	1.9e-11	57.58	Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1	[more]
O64852	5.6e-11	61.54	Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1	[more]
F4J061	2.1e-10	53.95	Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1	[more]

BLAST of Carg19450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E674	1.9e-70	97.48	protein IQ-DOMAIN 31-like OS=Cucurbita moschata OX=3662 GN=LOC111431153 PE=4 SV=...	[more]
A0A0A0L4V7	1.9e-54	83.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002470 PE=4 SV=1	[more]
A0A6J1H822	1.2e-43	68.39	protein IQ-DOMAIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111460382 PE=4 SV=1	[more]
A0A6J1I877	3.2e-41	67.95	protein IQ-DOMAIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111470076 PE=4 SV=1	[more]
A0A1R3GCE4	9.3e-25	51.97	IQ motif, EF-hand binding site OS=Corchorus capsularis OX=210143 GN=CCACVL1_2704...	[more]

BLAST of Carg19450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51380.1	3.6e-21	80.60	IQ-domain 20	[more]
AT3G52290.1	3.6e-13	55.41	IQ-domain 3	[more]
AT4G14750.1	1.4e-12	57.58	IQ-domain 19	[more]
AT2G26180.1	4.0e-12	61.54	IQ-domain 6	[more]
AT3G22190.1	1.5e-11	53.95	IQ-domain 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..64
None	No IPR available	GENE3D	1.20.5.190		coord: 81..131 e-value: 5.1E-10 score: 41.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..40
None	No IPR available	PANTHER	PTHR32295	IQ-DOMAIN 5-RELATED	coord: 4..149
None	No IPR available	PANTHER	PTHR32295:SF108	OS04G0561100 PROTEIN	coord: 4..149
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 104..125 e-value: 50.0 score: 7.9 coord: 81..103 e-value: 2.0E-6 score: 37.3
IPR000048	IQ motif, EF-hand binding site	PFAM	PF00612	IQ	coord: 85..103 e-value: 1.6E-7 score: 30.5
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 106..133 score: 7.6567
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 82..110 score: 11.4631
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 83..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19450-RA	Carg19450-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0005515	protein binding