Carg19230 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19230
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NDR1/HIN1-like protein 6
Location	Carg_Chr19: 8457925 .. 8460608 (+)
RNA-Seq Expression	Carg19230
Synteny	Carg19230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACCGCACCAAAACCCAAATATGTTATGCTCTCCGACAACCACCAAGGCAGCCTCCGTCCTCCGCCCTACCGCCGTCACGTCCCGAGATACCATTCCAAGGCACACGGCGGAGGCGGCAGCTGTGCTGGTTGTTGTTTGAAATGCATTTGTTGCTGTTACTGTTTCCTCTTATTCCTCATCTTTTCTCTGTTCGGCCTCGCCTATGTCCTCTTCTCATATTACAATCCCCAAATCCCTTCTTACAAAGTCTCTAGTTTCAATGTCCGTGTCTTCGACGTTAAGCCCGATTTCAGCCTCTACACCGAATTCATCGTCATCGTCACCGCCGACAACCCAAATCAAAACATCGACTTTGTCTACGGCAAAGGCAGCTATGTCTCTGTTCTCTACAATCAATCGGTGCTCTGCACCGGAGATATCCCCAATTTCCGACAGCCCTCCAAGAATGTCACCGACATAAGCATTTCGCTAACTGGGAAGAGCGAATTTGGATCTGGGCCTCAAGAGGCGCTGATGCAGAACCGACACAGCGGCAGAATTCCTTTGCTGGTCGTGGTGAAAGTGCCAGTCACCATCGTTATTGGAAGGTTGTCGTTGAAGAAGGTTAATGTGTTCGTTAATTGTTCGTTGATCGTTGATAATTTGTCCCCCGACAAGAAGGTTGGGATTTTGTCGACTAATTCTACTTACGGTGCTGCCTTGTAAACTGTAAAGCTCTGGGCATCATTTTACCCTTTCATTGCTCTCATCATTCTTAATCTTTTTTCTATGTAAATACATTGTGTTTTTCACTTTCTTGTCATAGATGGGTGGAAAATAGGTAATTAAGAAGCACCCCTTTTTTTCTTTTGTAAGTGCTATGGATGTTCATTCTTTTGCTTCAATGTGTATCTTATAAAGATTACGAGGTTTTTTCATCTAAGATTCTCGCCCTATCCCTCGACATCGTGTCGAAATATGACCAAAGTTCGTAACTTTATTGATATTTCTGCTAACCCTTTTGGCAAATGATGCATTTCCATTAACCGTCCAAGCTTAAGCCCTGCTAGCATATATTGTCTGGGTCTTTATAAAGAGTGTTTCGTCCTCGCTGGCACACTAATCGGATACCATTTCCCGCCACGTGGGATCTGGCAAGTTCTAAAAGAGATGGCTTCTTTTTTGCAGCGTTTAGTAAGCCTAGAATTTCGGCTAAGTCCATCCCACGTCCCCTCTCTGTGCTCTCTTTCTCTAAATTTTCAAACCCACTTCTGCTTAATAACTCCCAACAGTTATAATGAAATGATACTCAGTTTCATTGCCATGGTTCTCAAGTGTAAGTTCAGACATGTTTGGGATTCTATTTGGGTGGAGAAAAGCTTCAAAATGGTGGGTTCATTGCTACATGTTCTTATTTTTTAAAGGATTTGATATTTATTTGTGATTTTATACAGTAAGAAGCTGATCGAACAAGCTCTGTGCCGGCTTAAGATGCTCAAGAAGAAGAGATATTCAATTGCTAGGCAATTACGTGAAGATTTGTTTGAGCTGATTAGCAATGGCTATCAACAGATCGCCTTCAACAGGGTATGTCGAAACCAAATACTTTTTATGCGAGATCCCACATTGGTCGGAGACGTGAACGAATCATTCCTTTTAAGCGTGAGAAAAGTCTAAAGAAGACAATATCTAAGCCCCGGTGTTACAAATGGTATCAGAGCTAGATACCGGGCGGTGTGCCAGCGAGGACGCTGGACCTCCAAGGAGTGGAATGTAAGATTCCACGTCGGTTGGAGAAGGAAACGAAGCATTCCTTTTAAGGGTGTAGAAACCTCTTCTTAGGAGACACGTTTAAAGATTCATTTCTTTTGATTGTTTGTATGTCAGGTGGAGCAGCTTGTTAGAGATGAAAGCTTGATGGAGGCATATGATTTGATTGAAAACTTCTGTGAATTCATCCTGGTGAAGTTCTCCCATGTCAGGAAGAACAAGTAGGCTTAATTGACACCATTTTTTACGAGGTTTTGATCTGAGAAAAACATCCTTAAAAAATGTCTTTGTTGGTGGTTTCAGGACATGCCCAGATGATCTTATGGAAGCAATTTCAAGTCTCATATTTGCCTCTGCAAGATGTGGGGATTTTCCTGAGCTTAAACCGGTTCGAAAGTTCTTCGAGGAGCTTTACGGACAGCGTTTCGCCATGGCTGCTGTGGAATTGCATCCTGGAAACCTTGTGAATCCACAGGTATTAGAATCCTGTTCATAGATTGTTGGGTTATGAATATTGAAACATTCATTACTTTTGTACACAGATCAAAGAGAAGCTTGTAATGAAGGCTGTTTCAGATGATGAGAAGCAAAGATTAATGAATGAAATAGCTAGAGATTGCTTTCATCCAGCAATTCTGGCTCTTGAATACTGTCCAGATTGGTATCAAGAACATGGCTTAGACAGAACCAACGATCGCTTATCTTATGAAGTAACTATCGGTTATCTCATCGATAGACAGCAGCCATGTTATGTTCATTCCGAGTGTAGAACGGATGATCATGTCGATTCTATTCGGTCTCCGACGATTAATCGTTTAGATTATGATTGGAACGACGAAATCGTTTTCGATTCGTATTCGATTGGAAGTGTGGTTTATGATGTTTTTGTGTATCCGAGGCACGTTCATCCGAAAAAAGTTGCTTTATGA

mRNA sequence

ATGGATACCGCACCAAAACCCAAATATGTTATGCTCTCCGACAACCACCAAGGCAGCCTCCGTCCTCCGCCCTACCGCCGTCACGTCCCGAGATACCATTCCAAGGCACACGGCGGAGGCGGCAGCTGTGCTGGTTGTTGTTTGAAATGCATTTGTTGCTGTTACTGTTTCCTCTTATTCCTCATCTTTTCTCTGTTCGGCCTCGCCTATGTCCTCTTCTCATATTACAATCCCCAAATCCCTTCTTACAAAGTCTCTAGTTTCAATGTCCGTGTCTTCGACGTTAAGCCCGATTTCAGCCTCTACACCGAATTCATCGTCATCGTCACCGCCGACAACCCAAATCAAAACATCGACTTTGTCTACGGCAAAGGCAGCTATGTCTCTGTTCTCTACAATCAATCGGTGCTCTGCACCGGAGATATCCCCAATTTCCGACAGCCCTCCAAGAATGTCACCGACATAAGCATTTCGCTAACTGGGAAGAGCGAATTTGGATCTGGGCCTCAAGAGGCGCTGATGCAGAACCGACACAGCGGCAGAATTCCTTTGCTGGTCGTGGTGAAAGTGCCAGTCACCATCGTTATTGGAAGGTTGTCGTTGAAGAAGGTTAATGTGTTCGTTAATTGTTCGTTGATCGTTGATAATTTGTCCCCCGACAAGAAGGTTGGGATTTTGTCGACTAATTCTACTTACGGTGCTGCCTTGACATGCCCAGATGATCTTATGGAAGCAATTTCAAGTCTCATATTTGCCTCTGCAAGATGTGGGGATTTTCCTGAGCTTAAACCGGTTCGAAAGTTCTTCGAGGAGCTTTACGGACAGCGTTTCGCCATGGCTGCTGTGGAATTGCATCCTGGAAACCTTGTGAATCCACAGATCAAAGAGAAGCTTGTAATGAAGGCTGTTTCAGATGATGAGAAGCAAAGATTAATGAATGAAATAGCTAGAGATTGCTTTCATCCAGCAATTCTGGCTCTTGAATACTGTCCAGATTGGTATCAAGAACATGGCTTAGACAGAACCAACGATCGCTTATCTTATGAAGTAACTATCGGTTATCTCATCGATAGACAGCAGCCATGTTATGTTCATTCCGAGTGTAGAACGGATGATCATGTCGATTCTATTCGGTCTCCGACGATTAATCGTTTAGATTATGATTGGAACGACGAAATCGTTTTCGATTCGTATTCGATTGGAAGTGTGGTTTATGATGTTTTTGTGTATCCGAGGCACGTTCATCCGAAAAAAGTTGCTTTATGA

Coding sequence (CDS)

ATGGATACCGCACCAAAACCCAAATATGTTATGCTCTCCGACAACCACCAAGGCAGCCTCCGTCCTCCGCCCTACCGCCGTCACGTCCCGAGATACCATTCCAAGGCACACGGCGGAGGCGGCAGCTGTGCTGGTTGTTGTTTGAAATGCATTTGTTGCTGTTACTGTTTCCTCTTATTCCTCATCTTTTCTCTGTTCGGCCTCGCCTATGTCCTCTTCTCATATTACAATCCCCAAATCCCTTCTTACAAAGTCTCTAGTTTCAATGTCCGTGTCTTCGACGTTAAGCCCGATTTCAGCCTCTACACCGAATTCATCGTCATCGTCACCGCCGACAACCCAAATCAAAACATCGACTTTGTCTACGGCAAAGGCAGCTATGTCTCTGTTCTCTACAATCAATCGGTGCTCTGCACCGGAGATATCCCCAATTTCCGACAGCCCTCCAAGAATGTCACCGACATAAGCATTTCGCTAACTGGGAAGAGCGAATTTGGATCTGGGCCTCAAGAGGCGCTGATGCAGAACCGACACAGCGGCAGAATTCCTTTGCTGGTCGTGGTGAAAGTGCCAGTCACCATCGTTATTGGAAGGTTGTCGTTGAAGAAGGTTAATGTGTTCGTTAATTGTTCGTTGATCGTTGATAATTTGTCCCCCGACAAGAAGGTTGGGATTTTGTCGACTAATTCTACTTACGGTGCTGCCTTGACATGCCCAGATGATCTTATGGAAGCAATTTCAAGTCTCATATTTGCCTCTGCAAGATGTGGGGATTTTCCTGAGCTTAAACCGGTTCGAAAGTTCTTCGAGGAGCTTTACGGACAGCGTTTCGCCATGGCTGCTGTGGAATTGCATCCTGGAAACCTTGTGAATCCACAGATCAAAGAGAAGCTTGTAATGAAGGCTGTTTCAGATGATGAGAAGCAAAGATTAATGAATGAAATAGCTAGAGATTGCTTTCATCCAGCAATTCTGGCTCTTGAATACTGTCCAGATTGGTATCAAGAACATGGCTTAGACAGAACCAACGATCGCTTATCTTATGAAGTAACTATCGGTTATCTCATCGATAGACAGCAGCCATGTTATGTTCATTCCGAGTGTAGAACGGATGATCATGTCGATTCTATTCGGTCTCCGACGATTAATCGTTTAGATTATGATTGGAACGACGAAATCGTTTTCGATTCGTATTCGATTGGAAGTGTGGTTTATGATGTTTTTGTGTATCCGAGGCACGTTCATCCGAAAAAAGTTGCTTTATGA

Protein sequence

MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLFLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDFVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSGRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAALTCPDDLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAAVELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDRTNDRLSYEVTIGYLIDRQQPCYVHSECRTDDHVDSIRSPTINRLDYDWNDEIVFDSYSIGSVVYDVFVYPRHVHPKKVAL

Homology

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BLAST of Carg19230 vs. NCBI nr
Match: KAG7011967.1 (NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 865.1 bits (2234), Expect = 2.4e-247
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0


Query: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF 60
           MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF
Sbjct: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF 60

Query: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120
           LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF
Sbjct: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120

Query: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180
           VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG
Sbjct: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180

Query: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAALTCPD 240
           RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAALTCPD
Sbjct: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAALTCPD 240

Query: 241 DLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAAVELHPGNLVNPQIKEKLVM 300
           DLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAAVELHPGNLVNPQIKEKLVM
Sbjct: 241 DLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAAVELHPGNLVNPQIKEKLVM 300

Query: 301 KAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDRTNDRLSYEVTIGYLIDRQQ 360
           KAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDRTNDRLSYEVTIGYLIDRQQ
Sbjct: 301 KAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDRTNDRLSYEVTIGYLIDRQQ 360

Query: 361 PCYVHSECRTDDHVDSIRSPTINRLDYDWNDEIVFDSYSIGSVVYDVFVYPRHVHPKKVA 420
           PCYVHSECRTDDHVDSIRSPTINRLDYDWNDEIVFDSYSIGSVVYDVFVYPRHVHPKKVA
Sbjct: 361 PCYVHSECRTDDHVDSIRSPTINRLDYDWNDEIVFDSYSIGSVVYDVFVYPRHVHPKKVA 420

Query: 421 L 422
           L
Sbjct: 421 L 421

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BLAST of Carg19230 vs. NCBI nr
Match: KAG6572356.1 (NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 751.9 bits (1940), Expect = 3.0e-213
Identity = 383/465 (82.37%), Postives = 384/465 (82.58%), Query Frame = 0


Query: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF 60
           MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGG CAGCCLKCICCCYCFLLF
Sbjct: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGGCAGCCLKCICCCYCFLLF 60

Query: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120
           LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF
Sbjct: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120

Query: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180
           VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG
Sbjct: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180

Query: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL---- 240
           RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAA     
Sbjct: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAFKKLI 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 EQALCRLKMLKKKRYSIARQLREDLFELISNGYQQIAFNRVEQLVRDESLMEAYDLIENF 300

Query: 301 ---------------TCPDDLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAA 360
                          TCPDDLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAA
Sbjct: 301 CEFILVKFSHVRKNKTCPDDLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAA 360

Query: 361 VELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDR 387
           VELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDR
Sbjct: 361 VELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALEYCPDWYQEHGLDR 420

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BLAST of Carg19230 vs. NCBI nr
Match: KAE8645768.1 (hypothetical protein Csa_020499 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 3.8e-136
Identity = 263/419 (62.77%), Postives = 294/419 (70.17%), Query Frame = 0


Query: 1   MDTAPKPKYVMLS-DNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLL 60
           M+  PKPKYVMLS D+HQ SLRPPPYRR+VPRYHSKA+GGGG   GCCLKCICCCYCF+ 
Sbjct: 1   MEAPPKPKYVMLSDDHHQASLRPPPYRRNVPRYHSKANGGGGGGVGCCLKCICCCYCFIF 60

Query: 61  FLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNID 120
           FLIF+LFGL Y LF YYNPQ+PSYKVS F+V  F+VK DFSLYTEFIVIV ADNPN NI 
Sbjct: 61  FLIFALFGLGYFLFYYYNPQVPSYKVSDFSVHAFNVKSDFSLYTEFIVIVKADNPNANIG 120

Query: 121 FVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHS 180
           FVYGK S VSV+Y++S LC+G IPNFRQPSKNVTDISI L+G SEFGSG QEALMQNRHS
Sbjct: 121 FVYGKDSSVSVMYSKSELCSGQIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRHS 180

Query: 181 GRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL--- 240
           G+IPLLV VKVPVT+VIG LSLKKVNVFVNCSL+VD LSP+KKV ILS+N TYGA+    
Sbjct: 181 GKIPLLVKVKVPVTVVIGSLSLKKVNVFVNCSLVVDKLSPNKKVEILSSNYTYGASFKKL 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 IKTALCRLKLLRKKRYSIVKLLREDLCELINNGYQQIAFKRVEQLIQDETLMEAYDLIEN 300

Query: 301 ----------------TCPDDLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMA 340
                           TCPDD+ EAISSLIFASAR GDFPELK VRK FEE +G+ F +A
Sbjct: 301 FCEIILVKFSHIRKHKTCPDDITEAISSLIFASARFGDFPELKCVRKLFEERFGKSFIVA 360

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BLAST of Carg19230 vs. NCBI nr
Match: XP_022952848.1 (NDR1/HIN1-like protein 6 [Cucurbita moschata])

HSP 1 Score: 474.2 bits (1219), Expect = 1.2e-129
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF 60
           MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGG CAGCCLKCICCCYCFLLF
Sbjct: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGGCAGCCLKCICCCYCFLLF 60

Query: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120
           LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF
Sbjct: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120

Query: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180
           VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG
Sbjct: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180

Query: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL 237
           RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL
Sbjct: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL 236

[Close]

BLAST of Carg19230 vs. NCBI nr
Match: XP_023554601.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.8 bits (1187), Expect = 6.1e-126
Identity = 230/236 (97.46%), Postives = 230/236 (97.46%), Query Frame = 0


Query: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF 60
           MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSK HGGGG CAGCCLKCICCCYCFLLF
Sbjct: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKTHGGGGGCAGCCLKCICCCYCFLLF 60

Query: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120
           LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF
Sbjct: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120

Query: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180
           VYGK SYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSG QEALMQNRHSG
Sbjct: 121 VYGKDSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGLQEALMQNRHSG 180

Query: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL 237
           RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILS N TYGAAL
Sbjct: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSNNYTYGAAL 236

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BLAST of Carg19230 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-24
Identity = 63/188 (33.51%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 46  CCLKCICCCYCFLLFLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEF 105
           CC +C C  +CFLL L+ ++     +L+  + P++P Y +    +  F +  D SL T F
Sbjct: 61  CCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAF 120

Query: 106 IVIVTADNPNQNIDFVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEF 165
            V +TA NPN+ I   Y  GS ++V Y +  L  G +P F Q  +N T I + +TG+++ 
Sbjct: 121 NVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQN 180

Query: 166 GSGPQEAL-MQNRHSGRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVG 225
            SG +  L  Q + +G IPL + V  PV +  G+L L +V   V C + VD+L+ +  + 
Sbjct: 181 ASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIK 240

Query: 226 ILSTNSTY 233
           I S++  +
Sbjct: 241 IQSSSCKF 248

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BLAST of Carg19230 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.7e-15
Identity = 64/223 (28.70%), Postives = 103/223 (46.19%), Query Frame = 0


Query: 4   APKPK-YVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLFLI 63
           AP P  YV+     Q    PPP   H     S+      +C     +C  C +   +F++
Sbjct: 31  APPPSTYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNC-----RCCFCSFLAAVFIL 90

Query: 64  FSLFGLAY-VLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDFV 123
             L G+++ VL+  Y P+ P Y +  F+V   ++     +   F V V + N N  I   
Sbjct: 91  IVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVY 150

Query: 124 YGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTG-KSEFGSGPQEALMQNRHSG 183
           Y K S V V YN   +  G +P F QP+KNVT + + L+G K +  SG ++ +       
Sbjct: 151 YEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK 210

Query: 184 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKV 224
            +P  + +K PV I  G +    + V V+C + VD L+   ++
Sbjct: 211 TVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRI 248

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BLAST of Carg19230 vs. ExPASy TrEMBL
Match: A0A6J1GLR6 (NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111455415 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 5.8e-130
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF 60
           MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGG CAGCCLKCICCCYCFLLF
Sbjct: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGGCAGCCLKCICCCYCFLLF 60

Query: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120
           LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF
Sbjct: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120

Query: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180
           VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG
Sbjct: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180

Query: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL 237
           RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL
Sbjct: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL 236

[Close]

BLAST of Carg19230 vs. ExPASy TrEMBL
Match: A0A6J1I215 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111468301 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 1.1e-125
Identity = 229/236 (97.03%), Postives = 231/236 (97.88%), Query Frame = 0


Query: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLF 60
           MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKA GGGG CAGCCLKCICCCYCFLLF
Sbjct: 1   MDTAPKPKYVMLSDNHQGSLRPPPYRRHVPRYHSKAQGGGGGCAGCCLKCICCCYCFLLF 60

Query: 61  LIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120
           LIFSLFGLAYVLFSYYNPQIPSY+VSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF
Sbjct: 61  LIFSLFGLAYVLFSYYNPQIPSYEVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDF 120

Query: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHSG 180
           VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTG SEFGSG QEALMQNRHSG
Sbjct: 121 VYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGNSEFGSGLQEALMQNRHSG 180

Query: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL 237
           RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILS+N TYGAAL
Sbjct: 181 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSSNYTYGAAL 236

[Close]

BLAST of Carg19230 vs. ExPASy TrEMBL
Match: A0A0A0K2B4 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047380 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 6.2e-100
Identity = 187/237 (78.90%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MDTAPKPKYVMLS-DNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLL 60
           M+  PKPKYVMLS D+HQ SLRPPPYRR+VPRYHSKA+GGGG   GCCLKCICCCYCF+ 
Sbjct: 1   MEAPPKPKYVMLSDDHHQASLRPPPYRRNVPRYHSKANGGGGGGVGCCLKCICCCYCFIF 60

Query: 61  FLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNID 120
           FLIF+LFGL Y LF YYNPQ+PSYKVS F+V  F+VK DFSLYTEFIVIV ADNPN NI 
Sbjct: 61  FLIFALFGLGYFLFYYYNPQVPSYKVSDFSVHAFNVKSDFSLYTEFIVIVKADNPNANIG 120

Query: 121 FVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRHS 180
           FVYGK S VSV+Y++S LC+G IPNFRQPSKNVTDISI L+G SEFGSG QEALMQNRHS
Sbjct: 121 FVYGKDSSVSVMYSKSELCSGQIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRHS 180

Query: 181 GRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAAL 237
           G+IPLLV VKVPVT+VIG LSLKKVNVFVNCSL+VD LSP+KKV ILS+N TYGA+L
Sbjct: 181 GKIPLLVKVKVPVTVVIGSLSLKKVNVFVNCSLVVDKLSPNKKVEILSSNYTYGASL 237

[Close]

BLAST of Carg19230 vs. ExPASy TrEMBL
Match: A0A6J1I0X9 (uncharacterized protein LOC111468061 OS=Cucurbita maxima OX=3661 GN=LOC111468061 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 9.0e-99
Identity = 181/219 (82.65%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 210 CSLIVDNLSPDKKVGILSTNSTY-GAALTCPDDLMEAISSLIFASARCGDFPELKPVRKF 269
           C  I+   S  +K    S  + + G   TCPDDLMEAISSLIFASARCGDFPELKPVRKF
Sbjct: 79  CEFILVKFSHVRKNKKTSLKNVFVGGFRTCPDDLMEAISSLIFASARCGDFPELKPVRKF 138

Query: 270 FEELYGQRFAMAAVELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALE 329
           FEE YGQRFAMAAVELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALE
Sbjct: 139 FEERYGQRFAMAAVELHPGNLVNPQIKEKLVMKAVSDDEKQRLMNEIARDCFHPAILALE 198

Query: 330 YCPDWYQEHGLDRTNDRLSYEVTIGYLIDRQQPCYVHSECRTDDHVDSIRSPTINRLDYD 389
           YCPDWYQEHGLDRTN+RLSYEVTIGYLID+QQPCYVHSECR DDHVDSI+SPTINRLDYD
Sbjct: 199 YCPDWYQEHGLDRTNNRLSYEVTIGYLIDKQQPCYVHSECRMDDHVDSIQSPTINRLDYD 258

Query: 390 WNDEIVFDSYSIGSVVYDVFV----------YPRHVHPK 418
           WNDEIVFDSYSIGS+VYDVFV          YPRHVHPK
Sbjct: 259 WNDEIVFDSYSIGSIVYDVFVYPHCQPYENKYPRHVHPK 297

[Close]

BLAST of Carg19230 vs. ExPASy TrEMBL
Match: A0A1S3C0T7 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495521 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.0e-98
Identity = 186/237 (78.48%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MDTAPKPKYVMLSDN-HQGSLRPPPYRRHVPRYHSKAH-GGGGSCAGCCLKCICCCYCFL 60
           M+  PKPKYVMLSDN HQ SLRPPPYRR+VPRY SKAH GGGG   GCCLKCICC YCF+
Sbjct: 1   MEAPPKPKYVMLSDNHHQTSLRPPPYRRNVPRYQSKAHGGGGGGGVGCCLKCICCFYCFI 60

Query: 61  LFLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNI 120
            FLIF+LFG  Y L+ YY+PQIPSYKVS+F+V  F+VKPDFSLYTEFIVIV ADNPNQNI
Sbjct: 61  FFLIFALFGFGYFLYYYYDPQIPSYKVSNFSVHAFNVKPDFSLYTEFIVIVKADNPNQNI 120

Query: 121 DFVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFGSGPQEALMQNRH 180
            F+YGK S VSV+Y++S LC+G IPNFRQPSKNVTDISI L+G SEFGSG QEALMQNRH
Sbjct: 121 GFIYGKNSSVSVMYSKSELCSGKIPNFRQPSKNVTDISILLSGNSEFGSGLQEALMQNRH 180

Query: 181 SGRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGILSTNSTYGAA 236
           SG+IPLLV VKVPVT+VIG LSLKKVNV VNCSL+VDNLSP+KKVGILS+N TYGA+
Sbjct: 181 SGKIPLLVEVKVPVTVVIGSLSLKKVNVLVNCSLVVDNLSPNKKVGILSSNYTYGAS 237

[Close]

BLAST of Carg19230 vs. TAIR 10
Match: AT1G54540.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 132.9 bits (333), Expect = 6.1e-31
Identity = 68/190 (35.79%), Postives = 115/190 (60.53%), Query Frame = 0


Query: 47  CLKCICCCYCFLLFLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFI 106
           C K  C     L+  + +L     V++  ++P++PSY+V+S  V    +  D SL  EF 
Sbjct: 50  CCKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFK 109

Query: 107 VIVTADNPNQNIDFVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEFG 166
           V +TA NPN+ I   Y KG ++ V Y+++ LC G IP F Q  +NVT ++++LTG++++G
Sbjct: 110 VEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQYG 169

Query: 167 SGPQEALMQNRHSGRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVGIL 226
           +    AL Q + +GR+PL + V  PV I +G L +KK+ +  +C L+VD+LS +  + I 
Sbjct: 170 NTVLAALQQQQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIK 229

Query: 227 STNSTYGAAL 237
           +++ ++ A L
Sbjct: 230 ASDCSFKAKL 239

[Close]

BLAST of Carg19230 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-25
Identity = 63/188 (33.51%), Postives = 103/188 (54.79%), Query Frame = 0


Query: 46  CCLKCICCCYCFLLFLIFSLFGLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEF 105
           CC +C C  +CFLL L+ ++     +L+  + P++P Y +    +  F +  D SL T F
Sbjct: 61  CCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAF 120

Query: 106 IVIVTADNPNQNIDFVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEF 165
            V +TA NPN+ I   Y  GS ++V Y +  L  G +P F Q  +N T I + +TG+++ 
Sbjct: 121 NVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQN 180

Query: 166 GSGPQEAL-MQNRHSGRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVG 225
            SG +  L  Q + +G IPL + V  PV +  G+L L +V   V C + VD+L+ +  + 
Sbjct: 181 ASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIK 240

Query: 226 ILSTNSTY 233
           I S++  +
Sbjct: 241 IQSSSCKF 248

[Close]

BLAST of Carg19230 vs. TAIR 10
Match: AT5G36970.1 (NDR1/HIN1-like 25 )

HSP 1 Score: 110.5 bits (275), Expect = 3.2e-24
Identity = 65/188 (34.57%), Postives = 99/188 (52.66%), Query Frame = 0


Query: 50  CICCCYCFLLFLIFSLF----GLAYVLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEF 109
           C C C C+ L ++F L      +  +L+  + P+ P Y +    +  F +  D SL T F
Sbjct: 57  CWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAF 116

Query: 110 IVIVTADNPNQNIDFVYGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTGKSEF 169
            V +TA NPN+ I   Y  GS +SVLY Q+ +  G +P F Q  +N T I + +TG ++ 
Sbjct: 117 NVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQN 176

Query: 170 GSGPQEALM-QNRHSGRIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKVG 229
            +     L  Q R +G IPL + V  PV I +G+L L KV   V C + VD+L+ +  + 
Sbjct: 177 ATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIR 236

Query: 230 ILSTNSTY 233
           + S+N  Y
Sbjct: 237 VRSSNCKY 244

[Close]

BLAST of Carg19230 vs. TAIR 10
Match: AT2G14830.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 100.5 bits (249), Expect = 3.3e-21
Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 239 PDDLMEAISSLIFASARCGDFPELKPVRKFFEELYGQRFAMAAVELHPGNLVNPQIKEKL 298
           PD + EA+S+L+FASARCGD PEL+ +R  F + YG  F   A+ L PGN VNPQ+ EKL
Sbjct: 166 PDGINEAVSTLVFASARCGDLPELRALRVLFGKRYGNHFVDTALNLLPGNCVNPQVIEKL 225

Query: 299 VMKAVSDDEKQRLMNEIARDC-FHPAILALEYCPDWYQE 337
            + +VSDD K +L+ EI  +      +LA+EY P+++++
Sbjct: 226 SIISVSDDAKSKLLGEIVEEYNLRLEVLAIEYTPEFHKQ 264

[Close]

BLAST of Carg19230 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-16
Identity = 64/223 (28.70%), Postives = 103/223 (46.19%), Query Frame = 0


Query: 4   APKPK-YVMLSDNHQGSLRPPPYRRHVPRYHSKAHGGGGSCAGCCLKCICCCYCFLLFLI 63
           AP P  YV+     Q    PPP   H     S+      +C     +C  C +   +F++
Sbjct: 31  APPPSTYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNC-----RCCFCSFLAAVFIL 90

Query: 64  FSLFGLAY-VLFSYYNPQIPSYKVSSFNVRVFDVKPDFSLYTEFIVIVTADNPNQNIDFV 123
             L G+++ VL+  Y P+ P Y +  F+V   ++     +   F V V + N N  I   
Sbjct: 91  IVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVY 150

Query: 124 YGKGSYVSVLYNQSVLCTGDIPNFRQPSKNVTDISISLTG-KSEFGSGPQEALMQNRHSG 183
           Y K S V V YN   +  G +P F QP+KNVT + + L+G K +  SG ++ +       
Sbjct: 151 YEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKK 210

Query: 184 RIPLLVVVKVPVTIVIGRLSLKKVNVFVNCSLIVDNLSPDKKV 224
            +P  + +K PV I  G +    + V V+C + VD L+   ++
Sbjct: 211 TVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRI 248

The following BLAST results are available for this feature:

BLAST of Carg19230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011967.1	2.4e-247	100.00	NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6572356.1	3.0e-213	82.37	NDR1/HIN1-like protein 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAE8645768.1	3.8e-136	62.77	hypothetical protein Csa_020499 [Cucumis sativus]	[more]
XP_022952848.1	1.2e-129	99.58	NDR1/HIN1-like protein 6 [Cucurbita moschata]	[more]
XP_023554601.1	6.1e-126	97.46	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	2.4e-24	33.51	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9ZVD2	2.7e-15	28.70	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]

BLAST of Carg19230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLR6	5.8e-130	99.58	NDR1/HIN1-like protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111455415 PE=4 SV=1	[more]
A0A6J1I215	1.1e-125	97.03	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111468301 PE=4 SV=1	[more]
A0A0A0K2B4	6.2e-100	78.90	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G047380 PE=4 ...	[more]
A0A6J1I0X9	9.0e-99	82.65	uncharacterized protein LOC111468061 OS=Cucurbita maxima OX=3661 GN=LOC111468061...	[more]
A0A1S3C0T7	2.0e-98	78.48	NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495521 PE=4 SV=1	[more]

BLAST of Carg19230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54540.1	6.1e-31	35.79	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G65690.1	1.7e-25	33.51	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G36970.1	3.2e-24	34.57	NDR1/HIN1-like 25	[more]
AT2G14830.1	3.3e-21	47.47	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT2G27080.1	1.9e-16	28.70	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 109..210 e-value: 7.1E-7 score: 29.7
IPR042277	Vacuolar protein sorting-associated protein IST1-like	GENE3D	1.20.1260.60		coord: 200..319 e-value: 6.5E-25 score: 89.7
IPR005061	Vacuolar protein sorting-associated protein Ist1	PFAM	PF03398	Ist1	coord: 223..318 e-value: 1.5E-21 score: 77.0
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 35..230
None	No IPR available	PANTHER	PTHR31852:SF176	HIN1-LIKE PROTEIN	coord: 35..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19230-RA	Carg19230-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0016021	integral component of membrane