
Carg19177 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGAACGCCGGCGCTGACGGTGTTGATCCCCCGCTGGAAGATTCCTCCGCCGGAGCTCAACAGCAAGAACAGAGTGGTTGGACTGATTACTTGGTGGATTATTCCTCGCCGGAAAATGCTGTATGTTCGAGCACTGGGAGCTGTTCTTGGGATCCCAATTCTGTTGGGAAAGCGGTTTTTGAGGATGATGATGATGCCTTAGAAGACACGGCTACTTCTCCTATTCACAGTACAAAAGTCAGCACATAA ATGGAGAAGAACGCCGGCGCTGACGGTGTTGATCCCCCGCTGGAAGATTCCTCCGCCGGAGCTCAACAGCAAGAACAGAGTGGTTGGACTGATTACTTGGTGGATTATTCCTCGCCGGAAAATGCTGTATGTTCGAGCACTGGGAGCTGTTCTTGGGATCCCAATTCTGTTGGGAAAGCGGTTTTTGAGGATGATGATGATGCCTTAGAAGACACGGCTACTTCTCCTATTCACAGTACAAAAGTCAGCACATAA ATGGAGAAGAACGCCGGCGCTGACGGTGTTGATCCCCCGCTGGAAGATTCCTCCGCCGGAGCTCAACAGCAAGAACAGAGTGGTTGGACTGATTACTTGGTGGATTATTCCTCGCCGGAAAATGCTGTATGTTCGAGCACTGGGAGCTGTTCTTGGGATCCCAATTCTGTTGGGAAAGCGGTTTTTGAGGATGATGATGATGCCTTAGAAGACACGGCTACTTCTCCTATTCACAGTACAAAAGTCAGCACATAA MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST Homology
BLAST of Carg19177 vs. NCBI nr
Match: KAG7011915.1 (hypothetical protein SDJN02_26823, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 170.6 bits (431), Expect = 5.6e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Carg19177 vs. NCBI nr
Match: KAG6572302.1 (hypothetical protein SDJN03_29030, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 170.6 bits (431), Expect = 5.6e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Carg19177 vs. NCBI nr
Match: XP_038888852.1 (vascular-related unknown protein 1-like [Benincasa hispida]) HSP 1 Score: 77.0 bits (188), Expect = 8.5e-11 Identity = 55/121 (45.45%), Postives = 70/121 (57.85%), Query Frame = 0
BLAST of Carg19177 vs. NCBI nr
Match: XP_008455422.1 (PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]) HSP 1 Score: 67.8 bits (164), Expect = 5.2e-08 Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of Carg19177 vs. NCBI nr
Match: XP_022930798.1 (vascular-related unknown protein 1-like [Cucurbita moschata] >XP_022930799.1 vascular-related unknown protein 1-like [Cucurbita moschata]) HSP 1 Score: 67.0 bits (162), Expect = 8.8e-08 Identity = 48/120 (40.00%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of Carg19177 vs. ExPASy TrEMBL
Match: A0A1S3C0F7 (uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08 Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of Carg19177 vs. ExPASy TrEMBL
Match: A0A6J1ESI7 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.3e-08 Identity = 48/120 (40.00%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of Carg19177 vs. ExPASy TrEMBL
Match: A0A6J1JN61 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111486202 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.7e-07 Identity = 48/120 (40.00%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of Carg19177 vs. ExPASy TrEMBL
Match: A0A6J1C2S1 (uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007924 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 8.0e-07 Identity = 49/124 (39.52%), Postives = 61/124 (49.19%), Query Frame = 0
BLAST of Carg19177 vs. ExPASy TrEMBL
Match: A0A0A0K3L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.7e-05 Identity = 40/110 (36.36%), Postives = 53/110 (48.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|